AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1186340


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186340 MtrunA17_Chr3g0080631 82.704 954 112 3 1 954 1 901 0.0 1582
Msa1186340 MtrunA17_Chr3g0080751 81.914 951 163 2 1 950 1 943 0.0 1555
Msa1186340 MtrunA17_Chr3g0080741 79.310 957 186 4 1 954 1 948 0.0 1528
Msa1186340 MtrunA17_Chr3g0094301 75.681 954 224 1 1 954 1 946 0.0 1448
Msa1186340 MtrunA17_Chr7g0229761 75.681 954 224 1 1 954 1 946 0.0 1448
Msa1186340 MtrunA17_Chr3g0080791 75.577 954 224 2 1 954 1 945 0.0 1420
Msa1186340 MtrunA17_Chr3g0080601 74.082 953 238 2 1 953 1 944 0.0 1412
Msa1186340 MtrunA17_Chr3g0080731 72.746 954 252 1 1 954 1 946 0.0 1384
Msa1186340 MtrunA17_Chr3g0080771 73.089 955 246 4 1 954 1 945 0.0 1368
Msa1186340 MtrunA17_Chr3g0080651 66.002 953 228 4 1 953 4 860 0.0 1173
Msa1186340 MtrunA17_Chr3g0081391 55.068 957 410 5 1 951 1 943 0.0 1036
Msa1186340 MtrunA17_Chr3g0080721 70.912 691 191 1 264 954 2 682 0.0 1012
Msa1186340 MtrunA17_Chr3g0081211 55.288 955 410 5 1 951 1 942 0.0 1007
Msa1186340 MtrunA17_Chr3g0081341 54.460 953 413 7 1 947 66 1003 0.0 993
Msa1186340 MtrunA17_Chr3g0081191 52.391 962 426 7 1 952 1 940 0.0 971
Msa1186340 MtrunA17_Chr3g0081371 53.423 964 413 9 1 947 1 945 0.0 949
Msa1186340 MtrunA17_Chr3g0081361 52.411 954 420 8 1 938 1 936 0.0 945
Msa1186340 MtrunA17_Chr1g0151481 52.242 959 426 12 1 947 1 939 0.0 926
Msa1186340 MtrunA17_Chr3g0084351 78.559 569 107 2 69 637 1 554 0.0 890
Msa1186340 MtrunA17_Chr3g0081181 51.005 945 433 8 1 942 1 918 0.0 869
Msa1186340 MtrunA17_Chr3g0101321 48.152 947 443 11 1 936 1 910 0.0 832
Msa1186340 MtrunA17_Chr3g0112511 46.448 943 460 13 1 936 1 905 0.0 756
Msa1186340 MtrunA17_Chr3g0100831 45.213 940 471 16 1 931 1 905 0.0 745
Msa1186340 MtrunA17_Chr3g0101331 45.775 935 447 16 1 905 1 905 0.0 737
Msa1186340 MtrunA17_Chr3g0100961 44.776 938 477 15 1 931 1 904 0.0 726
Msa1186340 MtrunA17_Chr1g0189351 45.699 930 449 15 1 905 1 899 0.0 724
Msa1186340 MtrunA17_Chr3g0101011 43.442 953 497 17 1 931 1 933 0.0 700
Msa1186340 MtrunA17_Chr3g0100801 42.874 849 402 10 5 849 2 771 0.0 625
Msa1186340 MtrunA17_Chr3g0100971 45.276 762 383 9 1 756 1 734 0.0 623
Msa1186340 MtrunA17_Chr3g0101231 41.415 961 500 21 1 931 1 928 0.0 612
Msa1186340 MtrunA17_Chr3g0100851 42.537 804 422 8 109 910 1 766 0.0 605
Msa1186340 MtrunA17_Chr3g0101271 39.935 924 505 13 19 933 6 888 0.0 604
Msa1186340 MtrunA17_Chr3g0101241 39.935 924 505 13 19 933 6 888 0.0 603
Msa1186340 MtrunA17_Chr3g0101201 40.638 940 503 19 9 931 19 920 0.0 602
Msa1186340 MtrunA17_Chr3g0101181 41.285 918 480 17 22 913 32 916 0.0 598
Msa1186340 MtrunA17_Chr3g0100761 43.364 761 359 8 1 756 1 694 0.0 587
Msa1186340 MtrunA17_Chr5g0410001 37.981 961 559 18 1 954 1 931 0.0 586
Msa1186340 MtrunA17_Chr3g0101221 39.410 949 526 16 2 931 4 922 0.0 584
Msa1186340 MtrunA17_Chr5g0410021 37.526 954 555 17 1 946 1 921 0.0 576
Msa1186340 MtrunA17_Chr5g0410031 37.810 968 556 20 1 954 1 936 0.0 575
Msa1186340 MtrunA17_Chr5g0409991 37.487 971 554 19 1 954 1 935 0.0 568
Msa1186340 MtrunA17_Chr3g0101251 39.157 973 496 22 1 951 1 899 0.0 553
Msa1186340 MtrunA17_Chr5g0409971 36.288 959 565 17 1 947 1 925 2.36e-178 542
Msa1186340 MtrunA17_Chr3g0100681 44.371 604 311 6 190 790 1 582 9.41e-156 471
Msa1186340 MtrunA17_Chr3g0100731 40.751 692 379 9 244 931 1 665 4.28e-150 460
Msa1186340 MtrunA17_Chr3g0101391 41.541 597 317 6 321 905 1 577 3.60e-143 439
Msa1186340 MtrunA17_Chr3g0100781 50.789 380 176 5 1 377 1 372 1.80e-115 358
Msa1186340 MtrunA17_Chr5g0404741 29.576 967 581 21 1 929 1 905 1.33e-112 368
Msa1186340 MtrunA17_Chr1g0189271 51.543 324 157 0 166 489 1 324 3.77e-107 335
Msa1186340 MtrunA17_Chr3g0084361 66.667 264 88 0 691 954 1 264 5.07e-107 332
Msa1186340 MtrunA17_Chr4g0037421 30.372 968 550 31 1 899 38 950 1.29e-101 340
Msa1186340 MtrunA17_Chr3g0101211 43.230 421 221 5 205 625 1 403 1.35e-99 318
Msa1186340 MtrunA17_Chr2g0299001 28.969 970 595 29 1 927 1 919 2.83e-97 327
Msa1186340 MtrunA17_Chr3g0080701 77.169 219 47 2 1 216 1 219 3.22e-97 305
Msa1186340 MtrunA17_Chr7g0219851 27.902 982 605 29 1 929 3 934 1.87e-91 311
Msa1186340 MtrunA17_Chr3g0101421 52.055 292 128 5 1 286 1 286 1.67e-86 279
Msa1186340 MtrunA17_Chr3g0100701 53.819 288 123 5 1 284 1 282 9.14e-85 288
Msa1186340 MtrunA17_Chr3g0100701 37.422 481 267 11 456 931 284 735 3.05e-77 268
Msa1186340 MtrunA17_Chr5g0444301 40.558 466 243 7 446 900 1 443 7.29e-84 277
Msa1186340 MtrunA17_Chr3g0081841 59.434 212 82 1 166 377 1 208 6.42e-80 268
Msa1186340 MtrunA17_Chr3g0081841 44.848 165 82 2 442 605 189 345 3.21e-30 125
Msa1186340 MtrunA17_Chr3g0081841 53.333 105 49 0 728 832 383 487 1.24e-28 121
Msa1186340 MtrunA17_Chr3g0101361 36.768 495 262 7 467 931 295 768 5.54e-75 262
Msa1186340 MtrunA17_Chr3g0101361 38.489 278 164 4 9 284 19 291 9.05e-45 174
Msa1186340 MtrunA17_Chr3g0100791 36.323 446 260 6 468 910 1 425 5.91e-72 245
Msa1186340 MtrunA17_Chr1g0189281 39.378 386 210 7 524 898 2 374 5.25e-70 237
Msa1186340 MtrunA17_Chr3g0081201 50.439 228 112 1 726 952 2 229 9.64e-68 226
Msa1186340 MtrunA17_Chr7g0248221 26.852 972 542 34 1 934 9 849 2.82e-65 236
Msa1186340 MtrunA17_Chr1g0197241 26.724 928 550 30 34 905 680 1533 4.12e-63 233
Msa1186340 MtrunA17_Chr3g0100721 51.556 225 100 4 1 223 1 218 1.66e-61 208
Msa1186340 MtrunA17_Chr3g0086221 26.738 935 557 34 1 884 1 858 2.52e-61 227
Msa1186340 MtrunA17_Chr3g0086161 26.406 871 523 30 1 828 1 796 1.03e-60 225
Msa1186340 MtrunA17_Chr1g0189551 25.107 932 565 27 20 932 52 869 1.12e-60 223
Msa1186340 MtrunA17_Chr7g0221481 27.050 939 539 38 1 885 1 847 1.69e-60 222
Msa1186340 MtrunA17_Chr8g0352831 28.097 662 402 23 40 669 50 669 8.11e-60 223
Msa1186340 MtrunA17_Chr3g0090141 26.271 826 498 34 41 823 51 808 1.78e-59 222
Msa1186340 MtrunA17_Chr1g0164611 28.641 817 465 35 42 807 52 801 1.93e-59 221
Msa1186340 MtrunA17_Chr1g0160871 64.516 155 51 1 646 800 1 151 2.20e-59 199
Msa1186340 MtrunA17_Chr3g0086181 26.903 959 558 38 1 903 1 872 5.48e-59 218
Msa1186340 MtrunA17_Chr3g0090371 25.209 956 564 37 41 914 51 937 7.03e-59 220
Msa1186340 MtrunA17_Chr7g0248531 27.618 659 395 23 42 678 50 648 1.07e-58 217
Msa1186340 MtrunA17_Chr1g0169901 27.743 793 470 30 1 767 18 733 1.74e-58 218
Msa1186340 MtrunA17_Chr3g0092241 28.378 740 404 29 33 728 43 700 2.51e-58 218
Msa1186340 MtrunA17_Chr3g0091081 26.658 754 456 27 31 755 41 726 2.82e-58 218
Msa1186340 MtrunA17_Chr3g0082131 29.110 663 383 24 42 669 50 660 7.55e-58 217
Msa1186340 MtrunA17_Chr6g0468151 26.576 952 575 37 1 907 1 873 9.27e-58 216
Msa1186340 MtrunA17_Chr3g0086621 27.126 870 507 33 1 823 1 790 1.05e-57 216
Msa1186340 MtrunA17_Chr3g0082101 28.750 800 434 35 42 807 52 749 1.09e-57 214
Msa1186340 MtrunA17_Chr6g0468451 26.780 941 557 35 1 905 1 845 2.13e-57 215
Msa1186340 MtrunA17_Chr3g0087841 25.841 832 510 33 33 823 43 808 2.51e-57 215
Msa1186340 MtrunA17_Chr3g0089501 26.982 719 439 27 33 727 41 697 3.65e-57 212
Msa1186340 MtrunA17_Chr3g0089911 26.558 674 421 24 28 678 38 660 4.10e-57 209
Msa1186340 MtrunA17_Chr4g0025391 28.271 665 402 26 28 669 38 650 9.32e-57 213
Msa1186340 MtrunA17_Chr3g0090651 26.372 747 454 26 42 757 52 733 1.04e-56 212
Msa1186340 MtrunA17_Chr2g0316291 26.492 838 518 29 27 823 31 811 1.50e-56 212
Msa1186340 MtrunA17_Chr2g0309721 27.900 681 391 25 33 678 43 658 2.19e-56 212
Msa1186340 MtrunA17_Chr3g0089601 26.982 719 439 27 33 727 41 697 2.51e-56 210
Msa1186340 MtrunA17_Chr3g0089991 27.177 666 404 23 33 669 43 656 4.00e-56 211
Msa1186340 MtrunA17_Chr5g0415471 24.639 970 594 35 1 903 1 900 5.21e-56 211
Msa1186340 MtrunA17_Chr1g0149071 32.947 431 196 8 235 648 1 355 8.12e-56 200
Msa1186340 MtrunA17_Chr1g0149071 43.478 161 86 2 695 851 293 452 3.39e-28 119
Msa1186340 MtrunA17_Chr3g0084031 27.623 753 445 28 38 757 49 734 8.58e-56 210
Msa1186340 MtrunA17_Chr6g0470081 25.418 956 601 36 1 916 1 884 1.00e-55 210
Msa1186340 MtrunA17_Chr3g0092261 26.092 824 489 36 28 805 83 832 1.00e-55 210
Msa1186340 MtrunA17_Chr1g0164631 28.157 689 388 24 42 673 51 689 1.11e-55 209
Msa1186340 MtrunA17_Chr3g0082791 27.910 756 438 28 38 757 49 733 1.53e-55 209
Msa1186340 MtrunA17_Chr3g0089811 27.586 754 424 33 33 741 43 719 2.10e-55 209
Msa1186340 MtrunA17_Chr3g0089761 27.376 705 420 27 52 727 58 699 2.41e-55 209
Msa1186340 MtrunA17_Chr5g0430621 26.233 953 544 38 1 886 1 861 4.93e-55 207
Msa1186340 MtrunA17_Chr3g0089211 25.841 832 507 34 33 823 90 852 5.36e-55 208
Msa1186340 MtrunA17_Chr3g0085451 28.870 814 477 33 165 927 133 895 5.78e-55 207
Msa1186340 MtrunA17_Chr3g0087581 26.310 954 571 37 1 900 1 876 6.86e-55 207
Msa1186340 MtrunA17_Chr3g0091061 25.936 748 456 26 42 757 52 733 7.10e-55 207
Msa1186340 MtrunA17_Chr3g0086151 27.478 797 458 30 1 757 1 717 7.36e-55 206
Msa1186340 MtrunA17_Chr5g0431051 26.176 978 563 40 1 917 1 880 9.06e-55 206
Msa1186340 MtrunA17_Chr6g0467961 27.778 684 417 25 1 669 1 622 1.31e-54 204
Msa1186340 MtrunA17_Chr3g0090401 25.879 711 418 26 41 716 262 898 1.46e-54 207
Msa1186340 MtrunA17_Chr3g0089781 26.222 839 495 33 33 823 43 805 1.75e-54 205
Msa1186340 MtrunA17_Chr5g0414311 26.777 971 581 42 1 906 1 906 1.96e-54 206
Msa1186340 MtrunA17_Chr7g0257541 24.871 969 563 34 8 931 14 862 2.99e-54 203
Msa1186340 MtrunA17_Chr3g0090431 28.283 693 416 27 167 823 33 680 3.26e-54 205
Msa1186340 MtrunA17_Chr3g0089541 26.466 665 409 23 33 669 43 655 3.48e-54 205
Msa1186340 MtrunA17_Chr3g0089871 27.496 691 396 29 31 669 41 678 4.94e-54 205
Msa1186340 MtrunA17_Chr5g0430291 25.381 985 577 37 1 923 1 889 6.70e-54 204
Msa1186340 MtrunA17_Chr8g0355411 26.117 873 516 30 1 826 7 797 8.04e-54 202
Msa1186340 MtrunA17_Chr6g0470011 26.059 921 568 35 10 888 6 855 8.22e-54 204
Msa1186340 MtrunA17_Chr3g0089651 25.137 915 563 35 33 890 43 892 8.92e-54 204
Msa1186340 MtrunA17_Chr3g0089471 27.660 752 440 32 31 738 41 732 9.71e-54 204
Msa1186340 MtrunA17_Chr5g0414181 26.249 941 560 40 1 888 1 860 1.30e-53 202
Msa1186340 MtrunA17_Chr1g0197201 25.786 954 587 30 7 907 462 1347 1.36e-53 204
Msa1186340 MtrunA17_Chr1g0164391 27.881 703 383 21 38 678 47 687 1.45e-53 203
Msa1186340 MtrunA17_Chr3g0082391 27.716 718 403 28 1 669 5 655 1.67e-53 201
Msa1186340 MtrunA17_Chr3g0090691 26.107 655 404 20 42 669 52 653 2.02e-53 203
Msa1186340 MtrunA17_Chr5g0414201 25.556 900 554 35 1 856 1 828 2.59e-53 201
Msa1186340 MtrunA17_Chr6g0467911 27.205 805 472 31 38 804 38 766 2.65e-53 199
Msa1186340 MtrunA17_Chr3g0084051 27.261 752 449 24 38 757 47 732 2.66e-53 202
Msa1186340 MtrunA17_Chr3g0089961 26.366 732 445 29 33 734 43 710 2.98e-53 201
Msa1186340 MtrunA17_Chr3g0089251 24.671 989 578 40 33 931 72 983 3.90e-53 202
Msa1186340 MtrunA17_Chr4g0027251 25.310 968 589 32 1 917 1 885 3.92e-53 201
Msa1186340 MtrunA17_Chr5g0430581 25.957 967 570 35 1 917 1 871 4.47e-53 201
Msa1186340 MtrunA17_Chr8g0352861 25.372 942 597 33 3 897 20 902 4.91e-53 202
Msa1186340 MtrunA17_Chr3g0082311 27.612 670 385 21 38 669 47 654 9.73e-53 201
Msa1186340 MtrunA17_Chr6g0468121 26.861 685 425 19 1 669 1 625 1.20e-52 200
Msa1186340 MtrunA17_Chr3g0085561 28.331 713 419 29 165 830 130 797 1.24e-52 199
Msa1186340 MtrunA17_Chr3g0089421 25.422 830 515 31 33 823 43 807 1.39e-52 200
Msa1186340 MtrunA17_Chr3g0085651 25.287 957 576 37 1 897 1 878 3.28e-52 199
Msa1186340 MtrunA17_Chr3g0123111 25.455 935 559 37 33 919 33 877 3.46e-52 199
Msa1186340 MtrunA17_Chr3g0087541 28.290 813 488 32 165 927 161 928 4.52e-52 199
Msa1186340 MtrunA17_Chr5g0430721 25.382 981 567 37 1 917 42 921 4.81e-52 198
Msa1186340 MtrunA17_Chr3g0089591 26.800 750 448 27 33 738 43 735 6.38e-52 198
Msa1186340 MtrunA17_Chr5g0430641 26.127 976 558 40 6 917 2 878 1.59e-51 196
Msa1186340 MtrunA17_Chr6g0484551 25.339 663 388 20 34 669 44 626 1.68e-51 195
Msa1186340 MtrunA17_Chr3g0101341 42.545 275 138 7 23 284 1 268 1.90e-51 182
Msa1186340 MtrunA17_Chr5g0430511 25.922 976 571 37 1 917 1 883 4.07e-51 195
Msa1186340 MtrunA17_Chr1g0189321 42.510 247 126 5 409 649 1 237 4.35e-51 180
Msa1186340 MtrunA17_Chr7g0257201 26.225 694 439 22 8 669 12 664 5.09e-51 194
Msa1186340 MtrunA17_Chr2g0282991 24.308 831 521 26 34 823 44 807 7.32e-51 195
Msa1186340 MtrunA17_Chr3g0085501 28.792 712 403 31 167 830 164 819 8.10e-51 195
Msa1186340 MtrunA17_Chr6g0468021 27.352 691 411 24 1 669 1 622 1.13e-50 194
Msa1186340 MtrunA17_Chr6g0470021 27.534 799 487 31 119 883 1 741 1.26e-50 192
Msa1186340 MtrunA17_Chr7g0244231 25.434 979 563 37 1 917 1 874 1.31e-50 193
Msa1186340 MtrunA17_Chr1g0155991 25.434 865 520 33 1 823 1 782 1.38e-50 193
Msa1186340 MtrunA17_Chr4g0051651 25.762 656 428 20 22 647 44 670 1.94e-50 189
Msa1186340 MtrunA17_Chr1g0155321 25.318 944 556 35 1 888 1 851 2.19e-50 193
Msa1186340 MtrunA17_Chr6g0468101 27.879 660 338 24 37 669 37 585 2.67e-50 193
Msa1186340 MtrunA17_Chr8g0348931 26.212 763 473 28 33 770 43 740 3.13e-50 193
Msa1186340 MtrunA17_Chr1g0164581 27.988 661 369 23 42 669 50 636 3.52e-50 193
Msa1186340 MtrunA17_Chr3g0085331 28.151 714 413 28 165 830 161 822 3.61e-50 193
Msa1186340 MtrunA17_Chr5g0430141 25.732 991 567 39 1 923 1 890 3.87e-50 192
Msa1186340 MtrunA17_Chr3g0082811 28.444 675 399 27 163 804 148 771 4.59e-50 190
Msa1186340 MtrunA17_Chr6g0468271 26.316 741 440 29 1 705 1 671 1.21e-49 191
Msa1186340 MtrunA17_Chr5g0429961 24.974 977 561 38 1 912 1 870 1.29e-49 190
Msa1186340 MtrunA17_Chr5g0433771 23.932 936 564 31 27 929 31 851 1.59e-49 189
Msa1186340 MtrunA17_Chr5g0430441 25.979 970 585 36 1 923 1 884 1.79e-49 190
Msa1186340 MtrunA17_Chr3g0101401 48.663 187 91 2 86 269 1 185 2.61e-49 172
Msa1186340 MtrunA17_Chr3g0082871 25.921 733 458 27 20 732 19 686 4.41e-49 186
Msa1186340 MtrunA17_Chr5g0446611 26.226 877 498 39 9 824 23 811 5.41e-49 187
Msa1186340 MtrunA17_Chr3g0082881 28.270 711 412 29 163 823 148 810 5.97e-49 187
Msa1186340 MtrunA17_Chr6g0471941 27.810 694 419 27 27 695 31 667 1.01e-48 187
Msa1186340 MtrunA17_Chr3g0085931 25.157 958 586 35 1 912 1 873 1.14e-48 188
Msa1186340 MtrunA17_Chr3g0113481 25.455 715 426 23 40 727 48 682 1.56e-48 185
Msa1186340 MtrunA17_Chr5g0430951 26.496 702 410 22 1 669 1 629 1.73e-48 186
Msa1186340 MtrunA17_Chr3g0086741 26.154 910 541 40 1 845 1 844 3.00e-48 185
Msa1186340 MtrunA17_Chr5g0429951 26.647 683 385 22 8 649 4 611 5.36e-48 185
Msa1186340 MtrunA17_Chr8g0346831 26.497 668 437 20 24 679 28 653 6.19e-48 185
Msa1186340 MtrunA17_Chr3g0087701 28.075 691 413 26 170 823 151 794 7.57e-48 185
Msa1186340 MtrunA17_Chr8g0338621 25.836 658 421 20 27 667 31 638 9.44e-48 181
Msa1186340 MtrunA17_Chr6g0475491 27.539 512 321 15 1 494 1 480 9.55e-48 183
Msa1186340 MtrunA17_Chr7g0257221 23.810 987 570 32 1 931 1 861 1.05e-47 184
Msa1186340 MtrunA17_Chr3g0087731 27.937 630 369 22 208 804 1 578 1.07e-47 184
Msa1186340 MtrunA17_Chr3g0096971 49.714 175 88 0 267 441 1 175 1.35e-47 167
Msa1186340 MtrunA17_Chr3g0100911 43.568 241 121 3 640 877 2 230 1.40e-47 169
Msa1186340 MtrunA17_Chr3g0089931 28.690 481 277 15 31 497 41 469 2.01e-47 178
Msa1186340 MtrunA17_Chr3g0084971 25.426 822 488 26 34 811 44 784 3.17e-47 183
Msa1186340 MtrunA17_Chr8g0344071 26.323 775 471 20 172 912 444 1152 3.78e-47 183
Msa1186340 MtrunA17_Chr3g0085801 26.185 802 462 29 1 767 1 707 4.63e-47 182
Msa1186340 MtrunA17_Chr8g0338391 24.899 988 589 41 27 927 31 952 4.85e-47 182
Msa1186340 MtrunA17_Chr2g0299091 28.739 595 345 20 174 734 140 689 6.48e-47 182
Msa1186340 MtrunA17_Chr2g0299101 26.022 734 460 23 32 734 34 715 6.89e-47 181
Msa1186340 MtrunA17_Chr4g0020501 26.553 644 385 21 38 669 3 570 7.00e-47 181
Msa1186340 MtrunA17_Chr3g0113791 25.035 715 429 22 40 727 48 682 8.97e-47 182
Msa1186340 MtrunA17_Chr3g0084081 26.358 865 535 31 1 823 1 805 1.39e-46 181
Msa1186340 MtrunA17_Chr2g0299151 25.068 738 448 22 52 757 57 721 1.61e-46 181
Msa1186340 MtrunA17_Chr3g0091041 28.298 470 271 15 42 497 52 469 2.86e-46 174
Msa1186340 MtrunA17_Chr7g0248431 28.704 540 331 18 20 534 24 534 8.88e-46 174
Msa1186340 MtrunA17_Chr8g0338261 25.680 662 412 22 27 663 31 637 9.25e-46 178
Msa1186340 MtrunA17_Chr4g0010201 29.077 650 376 26 151 762 137 739 1.05e-45 178
Msa1186340 MtrunA17_Chr2g0299121 26.807 664 416 20 32 666 34 656 1.37e-45 178
Msa1186340 MtrunA17_Chr6g0468341 29.501 461 281 15 41 494 41 464 1.78e-45 177
Msa1186340 MtrunA17_Chr1g0169951 25.788 698 439 21 6 669 10 662 4.88e-45 174
Msa1186340 MtrunA17_Chr7g0257191 23.053 976 602 30 1 936 1 867 5.25e-45 175
Msa1186340 MtrunA17_Chr6g0468331 26.462 650 393 22 41 648 41 647 6.30e-45 174
Msa1186340 MtrunA17_Chr4g0009781 28.550 676 395 25 126 763 116 741 7.79e-45 176
Msa1186340 MtrunA17_Chr5g0415511 26.237 667 402 23 1 648 1 596 1.08e-44 173
Msa1186340 MtrunA17_Chr3g0085471 24.146 878 547 35 1 830 1 807 1.56e-44 175
Msa1186340 MtrunA17_Chr5g0414231 27.096 513 316 16 1 494 1 474 1.58e-44 169
Msa1186340 MtrunA17_Chr8g0337891 26.592 628 405 21 34 648 38 622 2.15e-44 172
Msa1186340 MtrunA17_Chr3g0082891 24.432 880 545 32 3 830 2 813 8.28e-44 171
Msa1186340 MtrunA17_Chr3g0082351 27.035 688 414 26 15 669 20 652 1.20e-43 172
Msa1186340 MtrunA17_Chr4g0010221 25.827 786 461 30 26 762 26 738 3.56e-43 170
Msa1186340 MtrunA17_Chr3g0085111 25.917 791 477 29 1 755 1 718 5.30e-43 170
Msa1186340 MtrunA17_Chr3g0078361 28.846 468 274 17 205 640 1 441 6.71e-43 162
Msa1186340 MtrunA17_Chr7g0218941 26.324 661 417 23 27 669 31 639 6.83e-43 169
Msa1186340 MtrunA17_Chr1g0147141 25.298 755 445 29 38 757 61 731 6.86e-43 169
Msa1186340 MtrunA17_Chr3g0086091 27.199 739 448 28 208 904 1 691 9.64e-43 169
Msa1186340 MtrunA17_Chr8g0338671 27.617 554 322 18 165 685 39 546 1.04e-42 165
Msa1186340 MtrunA17_Chr3g0089431 27.594 453 278 14 31 468 41 458 1.30e-42 162
Msa1186340 MtrunA17_Chr3g0085131 25.693 794 480 33 1 758 1 720 4.29e-42 167
Msa1186340 MtrunA17_Chr4g0010261 28.439 647 373 26 126 735 116 709 1.59e-41 165
Msa1186340 MtrunA17_Chr3g0085521 25.128 780 483 32 176 904 149 878 2.68e-41 164
Msa1186340 MtrunA17_Chr3g0091011 23.874 955 586 37 1 904 1 865 4.69e-41 163
Msa1186340 MtrunA17_Chr3g0085551 26.861 618 381 23 170 761 41 613 4.92e-41 162
Msa1186340 MtrunA17_Chr8g0338251 25.441 680 422 24 1 661 9 622 9.24e-41 161
Msa1186340 MtrunA17_Chr8g0351821 27.235 481 303 15 1 472 1 443 1.03e-40 157
Msa1186340 MtrunA17_Chr3g0085161 26.656 619 371 23 166 758 23 584 4.23e-40 160
Msa1186340 MtrunA17_Chr3g0085751 23.851 914 578 35 38 904 39 881 2.54e-39 158
Msa1186340 MtrunA17_Chr3g0101351 42.081 221 120 5 9 227 21 235 3.35e-39 147
Msa1186340 MtrunA17_Chr3g0083621 25.176 711 420 26 1 669 21 661 1.16e-38 156
Msa1186340 MtrunA17_Chr4g0010251 27.835 582 351 20 207 762 197 735 2.32e-38 155
Msa1186340 MtrunA17_Chr2g0309151 28.070 456 287 16 232 670 2 433 2.38e-38 150
Msa1186340 MtrunA17_Chr3g0082321 25.943 663 351 24 38 669 47 600 9.90e-38 152
Msa1186340 MtrunA17_Chr8g0338361 26.052 499 324 15 165 648 21 489 1.07e-37 149
Msa1186340 MtrunA17_Chr4g0071021 26.294 483 282 16 6 470 2 428 1.11e-37 147
Msa1186340 MtrunA17_Chr5g0417251 26.617 665 389 30 276 896 28 637 1.39e-37 150
Msa1186340 MtrunA17_Chr3g0083751 26.345 725 413 26 1 669 19 678 2.31e-37 152
Msa1186340 MtrunA17_Chr3g0087301 22.977 927 567 36 1 886 1 821 6.02e-37 150
Msa1186340 MtrunA17_Chr5g0417301 25.519 674 336 24 16 649 16 563 2.64e-36 145
Msa1186340 MtrunA17_Chr5g0430331 25.979 485 278 17 1 460 1 429 4.31e-36 142
Msa1186340 MtrunA17_Chr8g0352211 25.698 681 434 20 4 669 1019 1642 1.72e-35 146
Msa1186340 MtrunA17_Chr8g0352211 25.000 496 289 25 200 669 222 660 1.21e-11 69.3
Msa1186340 MtrunA17_Chr3g0080871 25.031 807 495 29 152 905 135 884 1.85e-35 146
Msa1186340 MtrunA17_Chr3g0113781 25.641 624 393 20 227 823 4 583 4.87e-35 143
Msa1186340 MtrunA17_Chr5g0413811 25.140 712 466 27 232 926 2 663 5.36e-35 142
Msa1186340 MtrunA17_Chr4g0008461 28.980 490 285 20 192 659 152 600 7.59e-35 144
Msa1186340 MtrunA17_Chr6g0456131 25.634 710 433 26 27 707 30 673 1.39e-34 143
Msa1186340 MtrunA17_Chr1g0189301 51.064 141 57 4 65 202 2 133 1.53e-34 128
Msa1186340 MtrunA17_Chr3g0085171 24.767 751 459 29 38 758 36 710 2.07e-34 142
Msa1186340 MtrunA17_Chr3g0083721 25.832 631 374 22 65 669 31 593 5.60e-34 140
Msa1186340 MtrunA17_Chr1g0168901 26.466 665 367 27 38 666 40 618 1.68e-33 139
Msa1186340 MtrunA17_Chr8g0356251 26.734 591 350 22 127 669 121 676 1.95e-33 139
Msa1186340 MtrunA17_Chr3g0085091 24.194 806 483 33 1 758 1 726 6.70e-33 137
Msa1186340 MtrunA17_Chr5g0414291 24.882 422 276 11 1 408 1 395 1.43e-32 131
Msa1186340 MtrunA17_Chr3g0091971 26.038 530 305 17 165 669 136 603 1.92e-32 136
Msa1186340 MtrunA17_Chr3g0084061 26.023 611 386 21 173 757 160 730 1.40e-31 133
Msa1186340 MtrunA17_Chr6g0469991 26.633 398 243 14 10 393 6 368 1.88e-31 127
Msa1186340 MtrunA17_Chr4g0048421 26.250 480 311 17 199 667 173 620 2.31e-31 132
Msa1186340 MtrunA17_Chr6g0456121 26.306 517 315 20 173 669 151 621 3.19e-31 132
Msa1186340 MtrunA17_Chr5g0430901 23.555 934 536 37 1 888 1 802 5.26e-31 131
Msa1186340 MtrunA17_Chr7g0257551 28.657 335 209 9 170 484 86 410 1.57e-30 125
Msa1186340 MtrunA17_Chr6g0478721 25.367 477 319 16 199 667 91 538 2.36e-30 129
Msa1186340 MtrunA17_Chr1g0159111 26.427 473 296 17 199 643 174 622 2.78e-30 129
Msa1186340 MtrunA17_Chr4g0048471 25.319 470 313 17 199 657 48 490 3.06e-30 128
Msa1186340 MtrunA17_Chr1g0197181 26.769 523 312 17 436 905 2 506 1.28e-29 124
Msa1186340 MtrunA17_Chr3g0101171 57.426 101 35 2 435 535 5 97 2.40e-29 112
Msa1186340 MtrunA17_Chr6g0468401 26.687 326 193 11 41 355 41 331 7.55e-29 119
Msa1186340 MtrunA17_Chr2g0308491 31.111 270 155 6 192 451 10 258 1.07e-28 116
Msa1186340 MtrunA17_Chr4g0010491 31.250 336 198 10 126 453 116 426 5.90e-28 118
Msa1186340 MtrunA17_Chr3g0084811 26.730 636 374 26 65 669 227 801 6.95e-28 121
Msa1186340 MtrunA17_Chr2g0299141 29.213 356 210 11 335 666 34 371 1.50e-27 116
Msa1186340 MtrunA17_Chr7g0248411 27.381 336 210 11 71 392 5 320 1.79e-27 114
Msa1186340 MtrunA17_Chr8g0392521 26.807 332 198 13 43 358 19 321 2.55e-27 114
Msa1186340 MtrunA17_Chr3g0100841 51.786 112 50 3 1 108 1 112 2.91e-27 107
Msa1186340 MtrunA17_Chr1g0189261 58.889 90 34 2 1 89 1 88 3.90e-25 100
Msa1186340 MtrunA17_Chr8g0355071 28.470 281 174 10 223 494 31 293 7.77e-25 106
Msa1186340 MtrunA17_Chr3g0085701 27.069 447 276 19 170 588 149 573 1.21e-24 111
Msa1186340 MtrunA17_Chr3g0083591 26.181 508 299 18 192 669 154 615 1.49e-24 110
Msa1186340 MtrunA17_Chr1g0197191 28.242 347 200 10 63 398 22 330 2.64e-24 105
Msa1186340 MtrunA17_Chr3g0101161 42.759 145 79 2 791 931 44 188 4.51e-24 100
Msa1186340 MtrunA17_Chr6g0468111 24.797 492 265 15 196 673 70 470 6.08e-24 107
Msa1186340 MtrunA17_Chr5g0410481 24.958 593 326 19 177 727 142 657 5.29e-23 105
Msa1186340 MtrunA17_Chr3g0100261 28.405 514 308 22 187 674 159 638 7.16e-23 105
Msa1186340 MtrunA17_Chr3g0085721 26.716 408 235 16 1 395 1 357 8.55e-23 101
Msa1186340 MtrunA17_Chr8g0338681 28.175 252 165 7 232 480 2 240 8.78e-23 98.6
Msa1186340 MtrunA17_Chr8g0338861 29.971 347 205 13 312 646 7 327 1.29e-22 103
Msa1186340 MtrunA17_Chr3g0101411 58.974 78 31 1 1 77 1 78 4.25e-22 91.3
Msa1186340 MtrunA17_Chr3g0083641 24.077 569 343 18 145 669 126 649 6.43e-22 102
Msa1186340 MtrunA17_Chr5g0415551 27.326 344 213 12 171 498 27 349 6.80e-22 101
Msa1186340 MtrunA17_Chr8g0360991 30.263 304 183 8 199 493 173 456 8.18e-22 102
Msa1186340 MtrunA17_Chr1g0169941 28.185 259 152 10 276 524 43 277 9.49e-22 97.8
Msa1186340 MtrunA17_Chr2g0299131 29.167 240 130 6 173 393 2 220 1.31e-21 94.7
Msa1186340 MtrunA17_Chr3g0086071 27.684 354 211 10 422 757 11 337 1.39e-21 100
Msa1186340 MtrunA17_Chr3g0083681 23.853 545 348 17 167 675 145 658 2.81e-21 100
Msa1186340 MtrunA17_Chr3g0082381 27.445 317 184 11 33 334 42 327 2.88e-21 96.3
Msa1186340 MtrunA17_Chr2g0282981 23.288 365 252 8 34 395 44 383 4.61e-21 97.4
Msa1186340 MtrunA17_Chr5g0410301 25.085 586 336 21 177 711 143 676 6.00e-21 99.4
Msa1186340 MtrunA17_Chr5g0416571 22.762 391 226 12 1 376 1 330 9.09e-21 94.7
Msa1186340 MtrunA17_Chr6g0468141 28.094 299 155 10 109 396 3 252 1.59e-20 92.4
Msa1186340 MtrunA17_Chr5g0439121 27.345 501 269 21 198 667 172 608 2.36e-20 97.8
Msa1186340 MtrunA17_Chr1g0189331 44.037 109 57 1 698 802 1 109 2.98e-20 87.0
Msa1186340 MtrunA17_Chr3g0108811 25.829 573 310 25 183 707 162 667 3.45e-20 97.1
Msa1186340 MtrunA17_Chr5g0415491 28.444 225 136 6 163 377 11 220 3.97e-20 90.1
Msa1186340 MtrunA17_Chr3g0082371 29.066 289 169 9 386 669 1 258 4.01e-20 95.1
Msa1186340 MtrunA17_Chr3g0105571 26.761 497 293 20 199 667 119 572 7.35e-20 94.7
Msa1186340 MtrunA17_Chr5g0410261 24.185 583 320 18 177 704 161 676 1.12e-19 95.1
Msa1186340 MtrunA17_Chr3g0107211 25.817 612 340 26 175 738 144 689 3.03e-19 94.0
Msa1186340 MtrunA17_Chr3g0099571 24.466 609 376 25 175 720 149 736 5.69e-19 92.8
Msa1186340 MtrunA17_Chr3g0107931 24.768 755 432 30 199 905 191 857 5.95e-19 93.2
Msa1186340 MtrunA17_Chr1g0146241 25.560 536 334 16 164 675 145 639 4.01e-18 90.5
Msa1186340 MtrunA17_Chr6g0470001 24.621 528 323 21 425 916 3 491 4.80e-18 89.4
Msa1186340 MtrunA17_Chr2g0319851 27.857 280 174 11 175 447 226 484 6.98e-18 89.4
Msa1186340 MtrunA17_Chr5g0414911 26.105 475 272 20 199 656 181 593 1.18e-17 89.0
Msa1186340 MtrunA17_Chr7g0255111 24.815 540 316 21 164 678 145 619 1.18e-17 89.0
Msa1186340 MtrunA17_Chr3g0091961 26.184 359 208 13 334 669 6 330 1.39e-17 86.3
Msa1186340 MtrunA17_Chr7g0221021 26.096 502 337 18 199 687 207 687 1.56e-17 87.8
Msa1186340 MtrunA17_Chr7g0221171 24.596 557 338 24 199 726 229 732 1.59e-17 88.2
Msa1186340 MtrunA17_Chr5g0402671 26.158 367 237 13 172 534 159 495 2.09e-17 87.4
Msa1186340 MtrunA17_Chr1g0153981 26.855 283 171 11 190 463 196 451 2.56e-17 87.4
Msa1186340 MtrunA17_Chr7g0255401 21.948 729 454 22 200 863 118 796 2.74e-17 87.4
Msa1186340 MtrunA17_Chr3g0108061 25.403 496 284 19 205 660 1 450 3.81e-17 86.3
Msa1186340 MtrunA17_Chr3g0085421 30.061 163 99 5 167 323 88 241 5.33e-17 81.6
Msa1186340 MtrunA17_Chr5g0417081 29.412 255 163 7 199 453 1 238 6.81e-17 84.3
Msa1186340 MtrunA17_Chr4g0018431 23.718 780 436 33 175 900 196 870 7.34e-17 85.9
Msa1186340 MtrunA17_Chr7g0229751 24.494 494 307 18 199 667 120 572 7.37e-17 85.9
Msa1186340 MtrunA17_Chr5g0402721 26.344 372 233 13 172 534 144 483 7.39e-17 85.9
Msa1186340 MtrunA17_Chr7g0221061 25.403 496 312 20 199 667 277 741 1.04e-16 85.1
Msa1186340 MtrunA17_Chr7g0257251 35.185 162 94 5 338 494 10 165 1.49e-16 78.6
Msa1186340 MtrunA17_Chr3g0108791 27.839 273 173 7 205 471 1 255 1.52e-16 83.6
Msa1186340 MtrunA17_Chr3g0107181 25.102 490 300 18 204 667 162 610 3.78e-16 83.6
Msa1186340 MtrunA17_Chr6g0468361 31.907 257 135 10 426 669 4 233 4.60e-16 82.0
Msa1186340 MtrunA17_Chr2g0319821 28.455 246 151 8 196 433 241 469 5.20e-16 83.2
Msa1186340 MtrunA17_Chr3g0099591 23.913 552 351 19 169 680 143 665 5.21e-16 83.2
Msa1186340 MtrunA17_Chr7g0221071 24.494 494 300 20 199 646 96 562 5.50e-16 82.4
Msa1186340 MtrunA17_Chr4g0009171 24.648 426 257 17 114 524 113 489 5.70e-16 83.6
Msa1186340 MtrunA17_Chr4g0009171 24.620 329 201 12 199 524 932 1216 3.80e-12 70.9
Msa1186340 MtrunA17_Chr5g0402771 26.558 369 234 16 172 530 157 498 8.29e-16 82.4
Msa1186340 MtrunA17_Chr4g0009241 25.753 365 215 15 167 524 716 1031 1.18e-15 82.4
Msa1186340 MtrunA17_Chr3g0108821 27.273 297 190 8 183 471 150 428 2.23e-15 81.6
Msa1186340 MtrunA17_Chr7g0220981 27.740 292 184 11 199 482 55 327 2.26e-15 79.7
Msa1186340 MtrunA17_Chr3g0108211 27.628 333 193 11 205 524 1 298 2.43e-15 79.7
Msa1186340 MtrunA17_Chr6g0468201 30.040 253 141 8 426 669 4 229 2.67e-15 80.5
Msa1186340 MtrunA17_Chr6g0468191 24.793 242 155 9 1 237 1 220 2.68e-15 77.0
Msa1186340 MtrunA17_Chr7g0221131 25.767 489 298 22 199 646 241 705 3.65e-15 80.5
Msa1186340 MtrunA17_Chr3g0108011 28.793 323 186 13 183 496 186 473 5.22e-15 80.1
Msa1186340 MtrunA17_Chr6g0480271 30.418 263 160 10 174 433 195 437 5.63e-15 79.7
Msa1186340 MtrunA17_Chr1g0189311 45.000 80 44 0 205 284 1 80 9.46e-15 70.5
Msa1186340 MtrunA17_Chr3g0096821 23.265 533 316 19 177 667 140 621 1.06e-14 79.0
Msa1186340 MtrunA17_Chr5g0443761 25.000 532 312 18 179 669 11 496 2.89e-14 77.8
Msa1186340 MtrunA17_Chr6g0454971 27.273 341 176 16 199 524 249 532 3.59e-14 77.4
Msa1186340 MtrunA17_Chr5g0414171 28.251 223 131 7 305 521 221 420 3.91e-14 75.9
Msa1186340 MtrunA17_Chr5g0414171 26.609 233 137 8 1 221 1 211 4.41e-12 69.3
Msa1186340 MtrunA17_Chr3g0107621 27.046 281 179 7 199 471 168 430 4.46e-14 76.3
Msa1186340 MtrunA17_Chr6g0454851 25.000 476 270 21 204 651 306 722 4.68e-14 77.0
Msa1186340 MtrunA17_Chr4g0005891 25.455 495 254 23 199 651 249 670 4.88e-14 77.0
Msa1186340 MtrunA17_Chr5g0402681 25.135 370 240 13 172 534 143 482 5.97e-14 76.3
Msa1186340 MtrunA17_Chr3g0108101 27.636 275 173 7 205 471 1 257 7.29e-14 72.8
Msa1186340 MtrunA17_Chr3g0096721 24.848 495 305 21 199 667 167 620 8.00e-14 76.3
Msa1186340 MtrunA17_Chr5g0413821 23.176 233 153 7 1 223 1 217 9.80e-14 71.6
Msa1186340 MtrunA17_Chr6g0454951 24.421 475 284 17 199 651 295 716 1.13e-13 75.9
Msa1186340 MtrunA17_Chr4g0009401 24.595 370 210 15 167 524 673 985 1.37e-13 75.5
Msa1186340 MtrunA17_Chr1g0153991 28.302 265 150 11 210 463 213 448 1.92e-13 74.7
Msa1186340 MtrunA17_Chr5g0410351 23.146 553 333 20 210 736 192 678 2.06e-13 74.7
Msa1186340 MtrunA17_Chr3g0085431 27.397 292 164 11 381 646 5 274 2.14e-13 73.9
Msa1186340 MtrunA17_Chr6g0455131 21.854 604 370 25 84 651 177 714 2.39e-13 74.7
Msa1186340 MtrunA17_Chr4g0009301 24.523 367 217 15 167 524 714 1029 2.50e-13 74.7
Msa1186340 MtrunA17_Chr6g0455211 25.000 480 275 21 199 651 253 674 2.57e-13 74.3
Msa1186340 MtrunA17_Chr4g0009141 24.556 338 191 13 198 524 725 1009 2.82e-13 74.7
Msa1186340 MtrunA17_Chr4g0005871 25.959 339 194 14 199 528 334 624 5.31e-13 73.6
Msa1186340 MtrunA17_Chr7g0255761 27.778 198 91 3 200 395 73 220 6.18e-13 71.2
Msa1186340 MtrunA17_Chr8g0338881 23.485 528 303 22 177 669 216 677 9.54e-13 72.8
Msa1186340 MtrunA17_Chr7g0223531 27.520 367 186 19 177 524 197 502 1.24e-12 72.4
Msa1186340 MtrunA17_Chr7g0255681 23.722 489 287 21 199 669 1216 1636 1.35e-12 72.4
Msa1186340 MtrunA17_Chr7g0255681 25.911 247 161 9 199 442 213 440 5.95e-12 70.5
Msa1186340 MtrunA17_Chr7g0255681 25.506 247 163 9 199 442 714 942 2.03e-11 68.6
Msa1186340 MtrunA17_Chr8g0339031 22.556 532 307 23 164 669 183 635 1.70e-12 72.0
Msa1186340 MtrunA17_Chr7g0234891 25.095 263 166 10 199 450 129 371 1.70e-12 70.5
Msa1186340 MtrunA17_Chr1g0189341 43.023 86 47 1 820 905 1 84 1.74e-12 65.1
Msa1186340 MtrunA17_Chr6g0486521 24.268 478 275 18 210 656 230 651 2.04e-12 71.6
Msa1186340 MtrunA17_Chr3g0081941 23.482 741 427 35 199 888 165 816 2.18e-12 71.6
Msa1186340 MtrunA17_Chr1g0189511 24.920 313 165 13 365 669 5 255 2.72e-12 68.2
Msa1186340 MtrunA17_Chr4g0005591 25.469 373 216 16 167 528 246 567 3.20e-12 70.9
Msa1186340 MtrunA17_Chr8g0350071 28.013 307 170 14 205 500 1 267 3.27e-12 68.9
Msa1186340 MtrunA17_Chr3g0107961 28.137 263 163 7 205 460 1 244 3.28e-12 69.7
Msa1186340 MtrunA17_Chr3g0085731 23.563 522 311 23 165 669 189 639 3.51e-12 70.9
Msa1186340 MtrunA17_Chr3g0105551 26.901 342 196 13 199 524 165 468 3.60e-12 70.9
Msa1186340 MtrunA17_Chr8g0363851 24.625 333 207 11 199 526 30 323 6.31e-12 70.1
Msa1186340 MtrunA17_Chr3g0100981 36.296 135 82 2 796 929 4 135 9.52e-12 63.9
Msa1186340 MtrunA17_Chr3g0100771 36.296 135 82 2 796 929 4 135 9.52e-12 63.9
Msa1186340 MtrunA17_Chr6g0454931 23.913 506 315 18 177 661 252 708 9.87e-12 69.3
Msa1186340 MtrunA17_Chr6g0455031 25.478 471 271 22 204 651 234 647 1.02e-11 69.3
Msa1186340 MtrunA17_Chr6g0455191 26.393 341 179 16 199 524 517 800 1.08e-11 69.3
Msa1186340 MtrunA17_Chr6g0455551 24.153 472 266 22 210 651 296 705 1.23e-11 68.9
Msa1186340 MtrunA17_Chr7g0242801 23.960 505 294 21 175 648 263 708 1.39e-11 68.9
Msa1186340 MtrunA17_Chr5g0415481 24.948 481 293 24 462 906 10 458 1.84e-11 67.8
Msa1186340 MtrunA17_Chr7g0257261 25.000 256 156 8 1 239 1 237 1.99e-11 65.9
Msa1186340 MtrunA17_Chr8g0354701 26.136 264 167 8 175 433 190 430 5.86e-11 67.0
Msa1186340 MtrunA17_Chr6g0486361 24.600 500 298 20 175 652 194 636 6.25e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1186340 AT3G07040.1 30.494 951 603 21 1 933 1 911 1.02e-134 427
Msa1186340 AT5G48620.6 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G48620.1 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G48620.4 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G48620.2 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G48620.3 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G48620.5 28.661 956 600 29 1 929 1 901 1.59e-89 306
Msa1186340 AT5G43470.3 28.780 959 595 31 1 929 1 901 8.15e-88 301
Msa1186340 AT5G43470.2 28.780 959 595 31 1 929 1 901 8.15e-88 301
Msa1186340 AT5G43470.4 28.780 959 595 31 1 929 1 901 8.15e-88 301
Msa1186340 AT5G43470.1 28.780 959 595 31 1 929 1 901 8.15e-88 301
Msa1186340 AT3G50950.2 30.370 810 474 29 1 783 1 747 1.31e-84 291
Msa1186340 AT3G50950.1 30.370 810 474 29 1 783 1 747 1.31e-84 291
Msa1186340 AT3G46530.1 29.070 860 532 23 1 853 1 789 2.76e-84 290
Msa1186340 AT5G35450.2 28.063 955 596 34 1 929 1 890 5.41e-83 287
Msa1186340 AT5G35450.1 28.063 955 596 34 1 929 1 890 5.41e-83 287
Msa1186340 AT1G59780.1 28.234 974 577 32 1 938 6 893 7.98e-83 287
Msa1186340 AT1G59780.2 28.234 974 577 32 1 938 1 888 9.81e-83 286
Msa1186340 AT1G53350.1 27.859 962 598 29 1 929 1 899 1.70e-80 280
Msa1186340 AT1G50180.1 28.320 964 552 28 1 934 1 855 5.71e-79 275
Msa1186340 AT3G46730.1 28.686 875 527 22 1 854 1 799 8.86e-79 275
Msa1186340 AT1G58400.3 27.329 966 608 30 1 932 1 906 1.50e-78 275
Msa1186340 AT1G58400.2 27.329 966 608 30 1 932 1 906 1.50e-78 275
Msa1186340 AT1G58390.1 26.550 968 603 32 1 929 1 899 9.71e-77 270
Msa1186340 AT1G58390.2 26.550 968 603 32 1 929 1 899 9.71e-77 270
Msa1186340 AT3G46710.1 26.542 908 592 22 1 894 1 847 1.51e-76 268
Msa1186340 AT1G58400.1 27.122 966 600 30 1 932 1 896 2.81e-75 266
Msa1186340 AT1G58410.1 26.050 952 616 30 6 929 4 895 3.84e-71 254
Msa1186340 AT1G58410.4 26.050 952 616 30 6 929 4 895 3.84e-71 254
Msa1186340 AT1G58410.2 26.050 952 616 30 6 929 4 895 3.84e-71 254
Msa1186340 AT1G59218.1 26.797 918 590 30 1 887 1 867 1.45e-65 239
Msa1186340 AT1G59218.2 26.797 918 590 30 1 887 1 867 1.45e-65 239
Msa1186340 AT1G59218.3 26.797 918 590 30 1 887 1 867 1.45e-65 239
Msa1186340 AT1G58848.1 26.797 918 590 30 1 887 1 867 1.45e-65 239
Msa1186340 AT1G58848.2 26.797 918 590 30 1 887 1 867 1.45e-65 239
Msa1186340 AT1G59124.2 25.816 1042 619 35 1 933 1 997 5.21e-65 238
Msa1186340 AT1G58807.1 25.816 1042 619 35 1 933 1 997 5.21e-65 238
Msa1186340 AT1G59620.2 26.889 781 480 21 173 929 24 737 1.60e-63 229
Msa1186340 AT1G10920.1 30.312 706 415 27 173 845 37 698 1.19e-60 221
Msa1186340 AT1G10920.2 30.312 706 415 27 173 845 37 698 1.19e-60 221
Msa1186340 AT1G10920.4 30.312 706 415 27 173 845 37 698 1.19e-60 221
Msa1186340 AT1G58410.3 24.815 947 602 30 6 929 4 863 1.76e-57 214
Msa1186340 AT1G59124.1 27.324 882 561 31 1 856 1 828 1.95e-57 213
Msa1186340 AT1G58807.2 27.324 882 561 31 1 856 1 828 1.95e-57 213
Msa1186340 AT1G58602.2 26.573 922 585 32 1 887 1 865 4.54e-55 208
Msa1186340 AT1G58602.1 26.573 922 585 32 1 887 1 865 4.54e-55 208
Msa1186340 AT3G14470.1 25.888 788 495 25 1 757 4 733 1.47e-53 203
Msa1186340 AT3G14470.2 25.888 788 495 25 1 757 4 733 1.47e-53 203
Msa1186340 AT3G14460.1 27.586 754 427 28 12 727 22 694 4.71e-51 196
Msa1186340 AT1G12220.3 28.155 515 316 17 176 672 36 514 3.34e-40 160
Msa1186340 AT1G12220.1 28.155 515 316 17 176 672 157 635 9.52e-40 159
Msa1186340 AT1G12220.2 28.155 515 316 17 176 672 157 635 9.52e-40 159
Msa1186340 AT1G61300.1 26.534 554 332 17 199 704 63 589 7.41e-39 155
Msa1186340 AT1G12280.1 28.458 506 309 18 165 650 147 619 9.46e-39 156
Msa1186340 AT1G61180.1 26.721 494 310 16 177 651 154 614 4.31e-37 151
Msa1186340 AT1G10920.5 29.499 539 314 22 339 845 24 528 4.54e-37 148
Msa1186340 AT1G10920.3 29.499 539 314 22 339 845 24 528 4.54e-37 148
Msa1186340 AT1G61310.1 24.937 794 476 25 177 921 156 878 5.49e-37 150
Msa1186340 AT1G61180.2 26.721 494 310 16 177 651 154 614 5.96e-37 150
Msa1186340 AT5G63020.1 26.172 512 324 15 190 678 161 641 5.31e-36 147
Msa1186340 AT1G61190.2 26.127 754 462 28 199 921 175 864 6.33e-36 147
Msa1186340 AT1G61190.3 26.127 754 462 28 199 921 175 864 6.33e-36 147
Msa1186340 AT1G61190.1 26.127 754 462 28 199 921 175 864 1.42e-35 146
Msa1186340 AT1G61300.2 25.725 552 314 16 199 704 63 564 3.03e-35 144
Msa1186340 AT4G10780.1 26.384 542 355 17 151 676 130 643 1.16e-34 143
Msa1186340 AT4G10780.2 26.384 542 355 17 151 676 130 643 1.33e-34 143
Msa1186340 AT1G12210.3 27.466 517 323 17 173 669 112 596 1.81e-34 142
Msa1186340 AT1G12210.2 27.466 517 323 17 173 669 112 596 1.81e-34 142
Msa1186340 AT1G12210.1 27.255 521 319 17 173 669 154 638 2.71e-34 142
Msa1186340 AT4G26090.1 23.537 786 485 25 196 921 174 903 7.00e-34 141
Msa1186340 AT1G61190.4 25.532 752 444 27 199 921 175 839 4.71e-32 135
Msa1186340 AT4G27190.1 28.063 506 281 19 200 669 167 625 1.30e-31 134
Msa1186340 AT4G27220.1 28.112 498 296 21 200 673 137 596 4.17e-31 132
Msa1186340 AT4G27220.2 28.112 498 296 21 200 673 145 604 4.94e-31 132
Msa1186340 AT5G47250.1 27.088 491 309 17 196 669 175 633 9.93e-30 127
Msa1186340 AT1G63350.1 23.716 662 415 25 9 643 12 610 1.47e-29 127
Msa1186340 AT1G63350.4 23.716 662 415 25 9 643 12 610 2.04e-29 126
Msa1186340 AT1G63350.3 23.716 662 415 25 9 643 12 610 2.07e-29 126
Msa1186340 AT1G63350.2 23.716 662 415 25 9 643 12 610 2.07e-29 126
Msa1186340 AT1G51480.1 25.523 478 285 20 204 651 180 616 2.20e-29 126
Msa1186340 AT5G43730.4 26.772 508 296 20 196 672 171 633 5.03e-29 125
Msa1186340 AT5G43730.1 26.772 508 296 20 196 672 171 633 5.03e-29 125
Msa1186340 AT5G43730.3 26.772 508 296 20 196 672 171 633 5.03e-29 125
Msa1186340 AT5G43730.2 26.772 508 296 20 196 672 171 633 5.03e-29 125
Msa1186340 AT5G43730.5 26.772 508 296 20 196 672 171 633 5.03e-29 125
Msa1186340 AT5G43740.1 26.477 491 286 18 196 654 170 617 2.84e-28 123
Msa1186340 AT5G43740.2 26.477 491 286 18 196 654 170 617 2.84e-28 123
Msa1186340 AT5G05400.1 25.134 561 349 22 175 716 155 663 2.88e-28 123
Msa1186340 AT1G15890.2 28.313 498 301 20 196 672 13 475 1.10e-27 120
Msa1186340 AT1G12290.4 26.195 523 327 16 176 673 114 602 1.57e-27 120
Msa1186340 AT1G12290.3 26.195 523 327 16 176 673 114 602 1.57e-27 120
Msa1186340 AT1G12290.2 26.195 523 327 16 176 673 114 602 1.57e-27 120
Msa1186340 AT1G12280.2 26.733 505 286 21 165 650 109 548 1.94e-27 120
Msa1186340 AT1G12290.1 26.195 523 327 16 176 673 156 644 2.13e-27 120
Msa1186340 AT1G15890.1 28.313 498 301 20 196 672 173 635 2.24e-27 120
Msa1186340 AT5G05400.2 24.953 537 334 20 199 716 8 494 2.24e-27 119
Msa1186340 AT5G05400.3 24.953 537 334 20 199 716 8 494 2.24e-27 119
Msa1186340 AT5G47260.1 24.022 741 466 25 200 907 172 848 5.16e-26 115
Msa1186340 AT1G62630.1 25.035 723 439 28 210 892 185 844 5.40e-25 112
Msa1186340 AT1G63360.2 27.310 487 299 18 210 669 150 608 3.78e-24 109
Msa1186340 AT1G63360.1 27.310 487 299 18 210 669 185 643 3.96e-24 109
Msa1186340 AT5G17680.1 22.194 784 464 28 199 941 208 886 4.50e-18 90.5
Msa1186340 AT5G17680.2 22.321 784 463 28 199 941 209 887 4.66e-18 90.5
Msa1186340 AT1G27170.1 26.243 362 219 14 176 531 189 508 8.05e-15 80.1
Msa1186340 AT1G27170.2 26.243 362 219 14 176 531 189 508 1.11e-14 79.7
Msa1186340 AT5G41750.1 23.973 292 181 11 176 455 186 448 1.90e-13 75.5
Msa1186340 AT5G41750.2 23.973 292 181 11 176 455 186 448 1.90e-13 75.5
Msa1186340 AT1G69550.1 28.981 314 173 12 597 903 934 1204 6.57e-13 73.9
Msa1186340 AT1G69550.1 28.657 335 178 14 605 903 871 1180 1.03e-11 69.7
Msa1186340 AT1G69550.1 28.076 317 197 11 597 903 742 1037 7.61e-11 67.0

Find 187 sgRNAs with CRISPR-Local

Find 235 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTTCAAAGTTACGATTTA+AGG 0.101018 8_1:+24507132 None:intergenic
TGAGACAAAATTCAAGTTAA+TGG 0.143888 8_1:+24506850 None:intergenic
CCTACTACCTTTGTTGTTAT+TGG 0.152826 8_1:+24508227 None:intergenic
AGTTAAGGAGGTTAGGTTTA+AGG 0.182908 8_1:-24506970 Msa1186340:CDS
ATCTGTTGAATTTCGCTCTA+TGG 0.191511 8_1:-24506679 Msa1186340:CDS
TTGCCATTCAATTATGGTTT+TGG 0.203648 8_1:+24507957 None:intergenic
TGTAGTTCACCAACTGATTT+AGG 0.223763 8_1:+24507244 None:intergenic
TAAAATTGCTTCAGAGATTC+AGG 0.242536 8_1:-24508805 Msa1186340:CDS
CTACTACCTTTGTTGTTATT+GGG 0.242595 8_1:+24508228 None:intergenic
TCCAAAGAAGTTACGCAAAA+TGG 0.249966 8_1:-24508364 Msa1186340:CDS
AAGAGTTCCCATGCTTTATC+TGG 0.270670 8_1:+24508117 None:intergenic
CTTCTTTGGAAGAGGGTCTT+TGG 0.276367 8_1:+24508377 None:intergenic
TCAACAAGATACTCAAGTTT+TGG 0.284159 8_1:+24506764 None:intergenic
TCGCATAATCAAAGAATTTC+GGG 0.287081 8_1:+24506336 None:intergenic
ATCGCATAATCAAAGAATTT+CGG 0.287819 8_1:+24506335 None:intergenic
GTCCAGGAGGATTGACTATA+TGG 0.312167 8_1:+24508883 None:intergenic
CCCTTCTATCTGCATCTTTG+AGG 0.320503 8_1:+24509012 None:intergenic
TCACTGTTGGGCTTTACATC+TGG 0.330912 8_1:-24507103 Msa1186340:CDS
TCAAAGTTCCATCGCCTATA+AGG 0.331141 8_1:+24506558 None:intergenic
CTGAGGGTACCTCCTTCAGC+TGG 0.335878 8_1:+24506501 None:intergenic
TCTGGTGTGCAGATGGAAAA+AGG 0.341230 8_1:-24507085 Msa1186340:CDS
AGCAGTGGAGAGACAGAAAA+TGG 0.341902 8_1:-24508690 Msa1186340:CDS
CCAGGTCCTTATTCCTTCAT+TGG 0.342078 8_1:+24508971 None:intergenic
GGAAATACCTCGAACATAAA+AGG 0.344064 8_1:-24508314 Msa1186340:CDS
CAACACATTGTTGTGGTTAG+TGG 0.345154 8_1:+24507477 None:intergenic
AGTTACGATTTAAGGCAAAA+AGG 0.345502 8_1:+24507140 None:intergenic
CAATTGAAGCCGCTGAAGTT+GGG 0.346403 8_1:+24506820 None:intergenic
AGAGCGAAATTCAACAGATT+TGG 0.360285 8_1:+24506683 None:intergenic
ATTGAGGAAACAGAAATTGT+AGG 0.361656 8_1:-24508633 Msa1186340:CDS
CAAACCGTGTTGCTACCTTT+TGG 0.364309 8_1:+24508484 None:intergenic
AACCATATAGTTCTTCCTTT+GGG 0.366326 8_1:+24508601 None:intergenic
TGAACCTCACTCGCTTGAAT+AGG 0.370234 8_1:-24506592 Msa1186340:CDS
CAACCATATAGTTCTTCCTT+TGG 0.370476 8_1:+24508600 None:intergenic
TTTCTGTTTCCTCAATGAAA+AGG 0.377233 8_1:+24508640 None:intergenic
ATGCAAAATTTCACCATCAT+AGG 0.390387 8_1:+24506649 None:intergenic
CAGTCACCAATGAAGGAATA+AGG 0.390894 8_1:-24508977 Msa1186340:CDS
ACAGAAATTGTAGGATTTGA+AGG 0.395854 8_1:-24508624 Msa1186340:CDS
GAAGAAAAGTATTCACTGTT+GGG 0.399558 8_1:-24507115 Msa1186340:CDS
TGAAAATGTTAAGTCAGTTA+AGG 0.403082 8_1:-24506985 Msa1186340:CDS
TTGTTTCTCCCTTGAGTAGT+TGG 0.407018 8_1:+24509102 None:intergenic
GAGAACATGGGGATGCGTTA+AGG 0.407938 8_1:-24506937 Msa1186340:CDS
TCCTCAAAGATGCAGATAGA+AGG 0.408015 8_1:-24509013 Msa1186340:CDS
TCAAAATTTGAGCCTGGAGT+TGG 0.408349 8_1:-24507926 Msa1186340:CDS
TACTCCTCTGCAACTTGCTC+TGG 0.413338 8_1:+24507718 None:intergenic
GTGATTTCAGTGGTAGGAAT+GGG 0.413478 8_1:-24508549 Msa1186340:CDS
CAAGTCTCGGATGTTAGCTT+TGG 0.415162 8_1:-24507664 Msa1186340:CDS
TATTATGTGGAGGTAAATCA+TGG 0.417008 8_1:-24507031 Msa1186340:CDS
AAGAAGTTGGGTTCATGTCT+TGG 0.419202 8_1:-24507629 Msa1186340:CDS
TGATCAATAGCATAGTCCTC+TGG 0.419433 8_1:+24507802 None:intergenic
TTAAGTCAGTTAAGGAGGTT+AGG 0.421970 8_1:-24506977 Msa1186340:CDS
TCCACCGGAGCTTGAGGCTG+TGG 0.425744 8_1:-24508055 Msa1186340:CDS
AGAACATGGGGATGCGTTAA+GGG 0.426584 8_1:-24506936 Msa1186340:CDS
TGCAAGTTGTGAACATGAAC+TGG 0.429721 8_1:+24508150 None:intergenic
GTGAGCTTGTTTATCTCACT+TGG 0.430726 8_1:+24507175 None:intergenic
GTTTATTGACTCAAAGAAGT+TGG 0.430957 8_1:-24507642 Msa1186340:CDS
TGAGGGTACCTCCTTCAGCT+GGG 0.431137 8_1:+24506502 None:intergenic
AGAACTATATGGTTGGTTGT+TGG 0.431783 8_1:-24508592 Msa1186340:CDS
ATACTTTCAACAAATTCATC+TGG 0.432679 8_1:+24506431 None:intergenic
TGAAGAAAAGTATTCACTGT+TGG 0.434938 8_1:-24507116 Msa1186340:CDS
GAACCTCACTCGCTTGAATA+GGG 0.435619 8_1:-24506591 Msa1186340:CDS
TCAATTGAAGCCGCTGAAGT+TGG 0.438201 8_1:+24506819 None:intergenic
GCTTGGTGGGCGTTGTCCAC+CGG 0.438722 8_1:-24508070 Msa1186340:CDS
ACTGCAGTAGCATCAGCCTT+GGG 0.438866 8_1:-24509134 Msa1186340:CDS
CAAAATTTGAGCCTGGAGTT+GGG 0.443073 8_1:-24507925 Msa1186340:CDS
CCAATAACAACAAAGGTAGT+AGG 0.445254 8_1:-24508227 Msa1186340:CDS
ACCTTTGTTGTTATTGGGCA+TGG 0.446043 8_1:+24508233 None:intergenic
GATCTGAATATCACTACAAT+TGG 0.446557 8_1:-24506884 Msa1186340:CDS
AGCTAGATATATTGCCTGAA+TGG 0.450734 8_1:-24506790 Msa1186340:CDS
TCAAGTCCATGACTTATTGC+GGG 0.453797 8_1:-24507599 Msa1186340:CDS
TTTATTGACTCAAAGAAGTT+GGG 0.454913 8_1:-24507641 Msa1186340:CDS
TTCTGTTTCCTCAATGAAAA+GGG 0.455029 8_1:+24508641 None:intergenic
CGGGCCACTCGAGTGTTGAA+TGG 0.461759 8_1:+24506355 None:intergenic
GGCCCAAAGGAAGAACTATA+TGG 0.462520 8_1:-24508603 Msa1186340:CDS
TCTGTTGAATTTCGCTCTAT+GGG 0.465174 8_1:-24506678 Msa1186340:CDS
TGTCACTGATTATAGAAGTA+AGG 0.470196 8_1:-24508335 Msa1186340:CDS
TTTGCCACAGCCTCAAGCTC+CGG 0.471523 8_1:+24508051 None:intergenic
CAAAGCTAACATCCGAGACT+TGG 0.475075 8_1:+24507665 None:intergenic
AGGAGGTACCCTCAGGCATC+AGG 0.476710 8_1:-24506493 Msa1186340:CDS
AACCATAATTGAATGGCAAA+AGG 0.479675 8_1:-24507953 Msa1186340:CDS
AGGGTAAATTCAATCCTTAT+AGG 0.481561 8_1:-24506572 Msa1186340:CDS
TCAATTTGCTTATGACTGCT+TGG 0.484932 8_1:+24506292 None:intergenic
GTTGTCAATTCGCGTAATCA+AGG 0.487778 8_1:-24508775 Msa1186340:CDS
GAAGGGTTTGTTAAATCTGA+TGG 0.487854 8_1:-24507751 Msa1186340:CDS
ACTTAAGGTTCTTAAACCTA+AGG 0.489897 8_1:-24507288 Msa1186340:CDS
AATCCAAAACCATAATTGAA+TGG 0.490262 8_1:-24507960 Msa1186340:CDS
AACTGCAGTAGCATCAGCCT+TGG 0.491549 8_1:-24509135 Msa1186340:CDS
CAGCTGAAGGAGGTACCCTC+AGG 0.492598 8_1:-24506500 Msa1186340:CDS
TTGCGTAACTTCTTTGGAAG+AGG 0.494073 8_1:+24508369 None:intergenic
AGGATTACTGATCAAAATGA+TGG 0.496848 8_1:-24508418 Msa1186340:CDS
TGAATTGATTCAGAGAAGTC+TGG 0.498680 8_1:-24507689 Msa1186340:CDS
CCAATGAAGGAATAAGGACC+TGG 0.500204 8_1:-24508971 Msa1186340:CDS
ACCCTCAGGCATCAGGTCCT+TGG 0.501852 8_1:-24506486 Msa1186340:CDS
GTAAACTGTGTTCGAAGTCT+AGG 0.504585 8_1:-24507381 Msa1186340:CDS
TGTCATTGTGTGCATGATGA+TGG 0.505423 8_1:-24507541 Msa1186340:CDS
CTGGCAATTGTAGCCATTGG+TGG 0.508982 8_1:-24507997 Msa1186340:CDS
GATGAAGCAGTCACCAATGA+AGG 0.511321 8_1:-24508984 Msa1186340:CDS
ATTTCAGTGGTAGGAATGGG+GGG 0.516655 8_1:-24508546 Msa1186340:CDS
ATCCATATAGTCAATCCTCC+TGG 0.517296 8_1:-24508885 Msa1186340:CDS
TTGAAGGTACTTGACATTGA+AGG 0.517541 8_1:-24507355 Msa1186340:CDS
GAGGGTACCTCCTTCAGCTG+GGG 0.518269 8_1:+24506503 None:intergenic
GAGCATTACGTCCCAACTCC+AGG 0.518868 8_1:+24507914 None:intergenic
TTGAATACAGATCTGTGTCC+AGG 0.519474 8_1:+24508867 None:intergenic
AATTCAATCCTTATAGGCGA+TGG 0.519903 8_1:-24506566 Msa1186340:CDS
ATGTAATTGATGAATACCTT+CGG 0.520918 8_1:-24508911 Msa1186340:CDS
TGTTGAAAGTAAACCACCAA+TGG 0.525207 8_1:+24507984 None:intergenic
GGTGAATCAAAATTTGAGCC+TGG 0.526408 8_1:-24507932 Msa1186340:CDS
GATGGTGAATCACTCGTGGC+TGG 0.526546 8_1:-24507523 Msa1186340:CDS
CGTGTTCTTCCTAAATCAGT+TGG 0.528155 8_1:-24507253 Msa1186340:CDS
TATTTAGATCTGAGCTTGGT+GGG 0.530439 8_1:-24508083 Msa1186340:CDS
GAGAGACAGAAAATGGAAGA+TGG 0.532280 8_1:-24508683 Msa1186340:CDS
TAGTGATATTCAGATCTTCA+AGG 0.533215 8_1:+24506891 None:intergenic
AGTGATTTCAGTGGTAGGAA+TGG 0.534226 8_1:-24508550 Msa1186340:CDS
TGCGTAACTTCTTTGGAAGA+GGG 0.537916 8_1:+24508370 None:intergenic
GATCAATAGCATAGTCCTCT+GGG 0.543646 8_1:+24507803 None:intergenic
GAGAAGTCTGGTCCAAGTCT+CGG 0.544310 8_1:-24507677 Msa1186340:CDS
GCCACAGCCTCAAGCTCCGG+TGG 0.545013 8_1:+24508054 None:intergenic
AGGGTACCTCCTTCAGCTGG+GGG 0.546435 8_1:+24506504 None:intergenic
CTTTACATCTGGTGTGCAGA+TGG 0.546587 8_1:-24507092 Msa1186340:CDS
AAAGTATTTAGATCTGAGCT+TGG 0.547704 8_1:-24508087 Msa1186340:CDS
CTATGGGATGATGCCTATGA+TGG 0.550139 8_1:-24506662 Msa1186340:CDS
AGCACATAAATGATTCATGT+TGG 0.551027 8_1:+24507447 None:intergenic
GTCAAGTCCATGACTTATTG+CGG 0.552252 8_1:-24507600 Msa1186340:CDS
ATTATGTGGAGGTAAATCAT+GGG 0.553612 8_1:-24507030 Msa1186340:CDS
CCACTGGCAATTGTAGCCAT+TGG 0.554669 8_1:-24508000 Msa1186340:CDS
AATTGAAGCCGCTGAAGTTG+GGG 0.554713 8_1:+24506821 None:intergenic
ACTACATAACTTAGAGACAT+TGG 0.558553 8_1:-24507227 Msa1186340:CDS
ACTCAACAATGGATAGCTGA+AGG 0.558997 8_1:-24507769 Msa1186340:CDS
GTATTTAGATCTGAGCTTGG+TGG 0.559651 8_1:-24508084 Msa1186340:CDS
ACTATATGGTTGGTTGTTGG+AGG 0.559976 8_1:-24508589 Msa1186340:CDS
AAAATTCAAGCAACTACCAC+TGG 0.562978 8_1:-24508016 Msa1186340:CDS
AAATGTTAAGTCAGTTAAGG+AGG 0.568363 8_1:-24506982 Msa1186340:CDS
AAGGGTTTGTTAAATCTGAT+GGG 0.568651 8_1:-24507750 Msa1186340:CDS
AACTCCAGAGCAAGTTGCAG+AGG 0.569406 8_1:-24507722 Msa1186340:CDS
GATTTCAGTGGTAGGAATGG+GGG 0.570259 8_1:-24508547 Msa1186340:CDS
CCTCAAAGATGCAGATAGAA+GGG 0.576280 8_1:-24509012 Msa1186340:CDS
TGATTTCAGTGGTAGGAATG+GGG 0.576778 8_1:-24508548 Msa1186340:CDS
GCAAGTGTTCCAACTACTCA+AGG 0.577361 8_1:-24509111 Msa1186340:CDS
GCGTTGTCCACCGGAGCTTG+AGG 0.579193 8_1:-24508061 Msa1186340:CDS
CTCAACAATGGATAGCTGAA+GGG 0.582463 8_1:-24507768 Msa1186340:CDS
AGGCATGTAAGAAGAGAACA+TGG 0.588750 8_1:-24506950 Msa1186340:CDS
AAACCAAAATACAAAATGCA+TGG 0.594465 8_1:+24507829 None:intergenic
CAAAGGAAGAACTATATGGT+TGG 0.595963 8_1:-24508599 Msa1186340:CDS
GAAAGTATTGATCCAGACAA+AGG 0.596444 8_1:-24506416 Msa1186340:CDS
TCTCAATCATACACTGTGAG+AGG 0.598200 8_1:-24508438 Msa1186340:CDS
GCAAGAAGATATTTGCGACC+AGG 0.599787 8_1:-24508265 Msa1186340:CDS
TTATGTGGAGGTAAATCATG+GGG 0.600887 8_1:-24507029 Msa1186340:CDS
TGTAGGATTTGAAGGCCCAA+AGG 0.603672 8_1:-24508616 Msa1186340:CDS
TCACTTCCCGCAATAAGTCA+TGG 0.604090 8_1:+24507593 None:intergenic
AATAGCTTTGAGATTAACCA+AGG 0.605300 8_1:+24506469 None:intergenic
TGAAGCCGCTGAAGTTGGGG+TGG 0.611493 8_1:+24506824 None:intergenic
TTACCCTATTCAAGCGAGTG+AGG 0.612903 8_1:+24506588 None:intergenic
ATGAGAGATTAACTCAACAA+TGG 0.613921 8_1:-24507780 Msa1186340:CDS
CTCTCTTGAATATCTTACCA+TGG 0.615123 8_1:-24506534 Msa1186340:CDS
GTTGTGAACATGAACTGGAA+AGG 0.615676 8_1:+24508155 None:intergenic
TGGAACTTGCATCATTCTAG+TGG 0.615768 8_1:+24508194 None:intergenic
TTTGACTCCAGATAAAGCAT+GGG 0.618733 8_1:-24508124 Msa1186340:CDS
TGGGCATGGCAAATTCAACC+TGG 0.621481 8_1:+24508247 None:intergenic
CGCACAGTGATTTCAGTGGT+AGG 0.622379 8_1:-24508555 Msa1186340:CDS
TCAAGCAAAAGCAACAGCAG+TGG 0.626506 8_1:-24508705 Msa1186340:CDS
AGCTCTTCAACACATTGTTG+TGG 0.627926 8_1:+24507470 None:intergenic
CATCTCCACCCCAACTTCAG+CGG 0.629902 8_1:-24506829 Msa1186340:CDS
GAATATCACTACAATTGGTG+AGG 0.635087 8_1:-24506879 Msa1186340:CDS
TGACTATATGGATCAGCCGA+AGG 0.635992 8_1:+24508895 None:intergenic
GAGTGTTGAATGGATACAAG+AGG 0.636313 8_1:+24506365 None:intergenic
CTGCAGTAGCATCAGCCTTG+GGG 0.640328 8_1:-24509133 Msa1186340:CDS
ACCAAGGACCTGATGCCTGA+GGG 0.640628 8_1:+24506485 None:intergenic
CTATATGGTTGGTTGTTGGA+GGG 0.640736 8_1:-24508588 Msa1186340:CDS
ATGCATGGTTTCAAGTAGTG+AGG 0.641309 8_1:+24507844 None:intergenic
AACCAAGGACCTGATGCCTG+AGG 0.647888 8_1:+24506484 None:intergenic
TTCTCTCATATGCTTCACCC+AGG 0.649352 8_1:+24508953 None:intergenic
GCCATGCCCAATAACAACAA+AGG 0.650067 8_1:-24508234 Msa1186340:CDS
GCATGTAAGAAGAGAACATG+GGG 0.652708 8_1:-24506948 Msa1186340:CDS
TAGTTGGAACACTTGCCCCA+AGG 0.655727 8_1:+24509118 None:intergenic
GTATCCATTCAACACTCGAG+TGG 0.669732 8_1:-24506359 Msa1186340:CDS
CAAGTGTTCCAACTACTCAA+GGG 0.670639 8_1:-24509110 Msa1186340:CDS
CAATGAAGGAATAAGGACCT+GGG 0.670889 8_1:-24508970 Msa1186340:CDS
AGTGTTGAATGGATACAAGA+GGG 0.671484 8_1:+24506366 None:intergenic
ATGAAAAGGGAAGACAGTCG+AGG 0.671605 8_1:+24508654 None:intergenic
GGCATGTAAGAAGAGAACAT+GGG 0.684519 8_1:-24506949 Msa1186340:CDS
AATACAGATCTGTGTCCAGG+AGG 0.693931 8_1:+24508870 None:intergenic
TAATCAAGGAAAGAAGTGAG+AGG 0.696136 8_1:-24508761 Msa1186340:CDS
TGAGCGCACAGTGATTTCAG+TGG 0.700723 8_1:-24508559 Msa1186340:CDS
TGATGATGGTGAATCACTCG+TGG 0.706460 8_1:-24507527 Msa1186340:CDS
ACAGCCAAAAGGTAGCAACA+CGG 0.709057 8_1:-24508488 Msa1186340:CDS
CCAATGGCTACAATTGCCAG+TGG 0.720191 8_1:+24508000 None:intergenic
TATGTGGAGGTAAATCATGG+GGG 0.722155 8_1:-24507028 Msa1186340:CDS
TGAAATCACTGTGCGCTCAG+CGG 0.733206 8_1:+24508563 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATCATATTCCTAAAAATTT+GGG - chr8_1:24508122-24508141 Msa1186340:CDS 15.0%
!!! TTTCAAATTTTAGACAAACA+AGG - chr8_1:24506712-24506731 Msa1186340:CDS 20.0%
!!! TGATAATTTTTGATGATGTA+TGG - chr8_1:24507157-24507176 Msa1186340:CDS 20.0%
!! GAATCATATTCCTAAAAATT+TGG - chr8_1:24508121-24508140 Msa1186340:CDS 20.0%
!!! AAAAGATTTCCCAAATTTTT+AGG + chr8_1:24508134-24508153 None:intergenic 20.0%
!!! CACATAATAAAGTTTTTGTA+GGG + chr8_1:24508402-24508421 None:intergenic 20.0%
!!! GAAATTTTGCATTTTCAAAT+TGG - chr8_1:24508806-24508825 Msa1186340:CDS 20.0%
! ATGTAATTGATGAATACCTT+CGG - chr8_1:24506533-24506552 Msa1186340:CDS 25.0%
! AAGGATTTCTTGAAAAAATC+TGG + chr8_1:24507273-24507292 None:intergenic 25.0%
! AATCCAAAACCATAATTGAA+TGG - chr8_1:24507484-24507503 Msa1186340:CDS 25.0%
!! AAACCATGCATTTTGTATTT+TGG - chr8_1:24507612-24507631 Msa1186340:CDS 25.0%
! AAACCAAAATACAAAATGCA+TGG + chr8_1:24507618-24507637 None:intergenic 25.0%
!!! TTTATTGACTCAAAGAAGTT+GGG - chr8_1:24507803-24507822 Msa1186340:CDS 25.0%
! AGTGATCATTAGAAAAATGA+AGG - chr8_1:24507869-24507888 Msa1186340:CDS 25.0%
!!! GCTATTCATGTTTTTGATAA+AGG - chr8_1:24508017-24508036 Msa1186340:CDS 25.0%
!!! ATTCATGTTTTTGATAAAGG+TGG - chr8_1:24508020-24508039 Msa1186340:CDS 25.0%
!!! TTCATGTTTTTGATAAAGGT+GGG - chr8_1:24508021-24508040 Msa1186340:CDS 25.0%
! TTCTTCAAAGTTACGATTTA+AGG + chr8_1:24508315-24508334 None:intergenic 25.0%
!!! GGAAAAAGGTATTAAAAACA+TGG - chr8_1:24508373-24508392 Msa1186340:CDS 25.0%
!! CCACATAATAAAGTTTTTGT+AGG + chr8_1:24508403-24508422 None:intergenic 25.0%
! CCTACAAAAACTTTATTATG+TGG - chr8_1:24508400-24508419 Msa1186340:CDS 25.0%
! ACAAAAACTTTATTATGTGG+AGG - chr8_1:24508403-24508422 Msa1186340:CDS 25.0%
! TGAAAATGTTAAGTCAGTTA+AGG - chr8_1:24508459-24508478 Msa1186340:CDS 25.0%
!! TGAGACAAAATTCAAGTTAA+TGG + chr8_1:24508597-24508616 None:intergenic 25.0%
!! ATTTTGCATTTTCAAATTGG+AGG - chr8_1:24508809-24508828 Msa1186340:CDS 25.0%
! ATACTTTCAACAAATTCATC+TGG + chr8_1:24509016-24509035 None:intergenic 25.0%
! ATCGCATAATCAAAGAATTT+CGG + chr8_1:24509112-24509131 None:intergenic 25.0%
!!! TCTCTGAAGCAATTTTATGA+CGG + chr8_1:24506636-24506655 None:intergenic 30.0%
TAAAATTGCTTCAGAGATTC+AGG - chr8_1:24506639-24506658 Msa1186340:CDS 30.0%
TTCTGTTTCCTCAATGAAAA+GGG + chr8_1:24506806-24506825 None:intergenic 30.0%
TTTCTGTTTCCTCAATGAAA+AGG + chr8_1:24506807-24506826 None:intergenic 30.0%
ATTGAGGAAACAGAAATTGT+AGG - chr8_1:24506811-24506830 Msa1186340:CDS 30.0%
ACAGAAATTGTAGGATTTGA+AGG - chr8_1:24506820-24506839 Msa1186340:CDS 30.0%
AACCATATAGTTCTTCCTTT+GGG + chr8_1:24506846-24506865 None:intergenic 30.0%
AGGATTACTGATCAAAATGA+TGG - chr8_1:24507026-24507045 Msa1186340:CDS 30.0%
! TGTCACTGATTATAGAAGTA+AGG - chr8_1:24507109-24507128 Msa1186340:CDS 30.0%
! TCAAATACCTTTTATGTTCG+AGG + chr8_1:24507140-24507159 None:intergenic 30.0%
!! CTACTACCTTTGTTGTTATT+GGG + chr8_1:24507219-24507238 None:intergenic 30.0%
! AAAGTATTTAGATCTGAGCT+TGG - chr8_1:24507357-24507376 Msa1186340:CDS 30.0%
! TTGCCATTCAATTATGGTTT+TGG + chr8_1:24507490-24507509 None:intergenic 30.0%
AACCATAATTGAATGGCAAA+AGG - chr8_1:24507491-24507510 Msa1186340:CDS 30.0%
!! ATTTTGTCGCTTAGTTATGA+TGG - chr8_1:24507573-24507592 Msa1186340:CDS 30.0%
ATGAGAGATTAACTCAACAA+TGG - chr8_1:24507664-24507683 Msa1186340:CDS 30.0%
!! AAGGGTTTGTTAAATCTGAT+GGG - chr8_1:24507694-24507713 Msa1186340:CDS 30.0%
!! GTTTATTGACTCAAAGAAGT+TGG - chr8_1:24507802-24507821 Msa1186340:CDS 30.0%
AGCACATAAATGATTCATGT+TGG + chr8_1:24508000-24508019 None:intergenic 30.0%
!! TGGGAAATCTTTTTCACTTA+AGG - chr8_1:24508141-24508160 Msa1186340:CDS 30.0%
ACTTAAGGTTCTTAAACCTA+AGG - chr8_1:24508156-24508175 Msa1186340:CDS 30.0%
!! CACGTATTTTTGTATTCCTT+AGG + chr8_1:24508175-24508194 None:intergenic 30.0%
ACTACATAACTTAGAGACAT+TGG - chr8_1:24508217-24508236 Msa1186340:CDS 30.0%
! AGTTACGATTTAAGGCAAAA+AGG + chr8_1:24508307-24508326 None:intergenic 30.0%
!! TGAAGAAAAGTATTCACTGT+TGG - chr8_1:24508328-24508347 Msa1186340:CDS 30.0%
!! GAAGAAAAGTATTCACTGTT+GGG - chr8_1:24508329-24508348 Msa1186340:CDS 30.0%
TATTATGTGGAGGTAAATCA+TGG - chr8_1:24508413-24508432 Msa1186340:CDS 30.0%
ATTATGTGGAGGTAAATCAT+GGG - chr8_1:24508414-24508433 Msa1186340:CDS 30.0%
AAATGTTAAGTCAGTTAAGG+AGG - chr8_1:24508462-24508481 Msa1186340:CDS 30.0%
TAGTGATATTCAGATCTTCA+AGG + chr8_1:24508556-24508575 None:intergenic 30.0%
GATCTGAATATCACTACAAT+TGG - chr8_1:24508560-24508579 Msa1186340:CDS 30.0%
! TCAACAAGATACTCAAGTTT+TGG + chr8_1:24508683-24508702 None:intergenic 30.0%
ATGCAAAATTTCACCATCAT+AGG + chr8_1:24508798-24508817 None:intergenic 30.0%
AGGGTAAATTCAATCCTTAT+AGG - chr8_1:24508872-24508891 Msa1186340:CDS 30.0%
!! AATAGCTTTGAGATTAACCA+AGG + chr8_1:24508978-24508997 None:intergenic 30.0%
TCGCATAATCAAAGAATTTC+GGG + chr8_1:24509111-24509130 None:intergenic 30.0%
!!! GGGGAATCAAAGTTTTGATT+GGG + chr8_1:24506615-24506634 None:intergenic 35.0%
!! TCTGAAGCAATTTTATGACG+GGG + chr8_1:24506634-24506653 None:intergenic 35.0%
!!! CTCTGAAGCAATTTTATGAC+GGG + chr8_1:24506635-24506654 None:intergenic 35.0%
TAATCAAGGAAAGAAGTGAG+AGG - chr8_1:24506683-24506702 Msa1186340:CDS 35.0%
CAACCATATAGTTCTTCCTT+TGG + chr8_1:24506847-24506866 None:intergenic 35.0%
CAAAGGAAGAACTATATGGT+TGG - chr8_1:24506845-24506864 Msa1186340:CDS 35.0%
! AGAACTATATGGTTGGTTGT+TGG - chr8_1:24506852-24506871 Msa1186340:CDS 35.0%
!! AATGATGGAGCAATTTTGTC+TGG - chr8_1:24507041-24507060 Msa1186340:CDS 35.0%
TCCAAAGAAGTTACGCAAAA+TGG - chr8_1:24507080-24507099 Msa1186340:CDS 35.0%
! TCCATTTTGCGTAACTTCTT+TGG + chr8_1:24507084-24507103 None:intergenic 35.0%
GGAAATACCTCGAACATAAA+AGG - chr8_1:24507130-24507149 Msa1186340:CDS 35.0%
!! CCTACTACCTTTGTTGTTAT+TGG + chr8_1:24507220-24507239 None:intergenic 35.0%
CCAATAACAACAAAGGTAGT+AGG - chr8_1:24507217-24507236 Msa1186340:CDS 35.0%
!! TTTTGACTCCAGATAAAGCA+TGG - chr8_1:24507319-24507338 Msa1186340:CDS 35.0%
TTTGACTCCAGATAAAGCAT+GGG - chr8_1:24507320-24507339 Msa1186340:CDS 35.0%
TATTTAGATCTGAGCTTGGT+GGG - chr8_1:24507361-24507380 Msa1186340:CDS 35.0%
AAAATTCAAGCAACTACCAC+TGG - chr8_1:24507428-24507447 Msa1186340:CDS 35.0%
TGTTGAAAGTAAACCACCAA+TGG + chr8_1:24507463-24507482 None:intergenic 35.0%
! CACCTTTTGCCATTCAATTA+TGG + chr8_1:24507496-24507515 None:intergenic 35.0%
!!! GTATTTTGGTTTATACCCAG+AGG - chr8_1:24507626-24507645 Msa1186340:CDS 35.0%
!! GAAGGGTTTGTTAAATCTGA+TGG - chr8_1:24507693-24507712 Msa1186340:CDS 35.0%
! TGAATTGATTCAGAGAAGTC+TGG - chr8_1:24507755-24507774 Msa1186340:CDS 35.0%
! TTTTGATAAAGGTGGGTCAT+TGG - chr8_1:24508028-24508047 Msa1186340:CDS 35.0%
!! TTCGAAGTCTAGGATTTTGA+AGG - chr8_1:24508073-24508092 Msa1186340:CDS 35.0%
!! TTGAAGGTACTTGACATTGA+AGG - chr8_1:24508089-24508108 Msa1186340:CDS 35.0%
! TGTAGTTCACCAACTGATTT+AGG + chr8_1:24508203-24508222 None:intergenic 35.0%
TTATGTGGAGGTAAATCATG+GGG - chr8_1:24508415-24508434 Msa1186340:CDS 35.0%
TTAAGTCAGTTAAGGAGGTT+AGG - chr8_1:24508467-24508486 Msa1186340:CDS 35.0%
AGTTAAGGAGGTTAGGTTTA+AGG - chr8_1:24508474-24508493 Msa1186340:CDS 35.0%
GAATATCACTACAATTGGTG+AGG - chr8_1:24508565-24508584 Msa1186340:CDS 35.0%
AGCTAGATATATTGCCTGAA+TGG - chr8_1:24508654-24508673 Msa1186340:CDS 35.0%
!!! TCAAGTTTTGGAATCCATTC+AGG + chr8_1:24508671-24508690 None:intergenic 35.0%
AGAGCGAAATTCAACAGATT+TGG + chr8_1:24508764-24508783 None:intergenic 35.0%
ATCTGTTGAATTTCGCTCTA+TGG - chr8_1:24508765-24508784 Msa1186340:CDS 35.0%
TCTGTTGAATTTCGCTCTAT+GGG - chr8_1:24508766-24508785 Msa1186340:CDS 35.0%
AATTCAATCCTTATAGGCGA+TGG - chr8_1:24508878-24508897 Msa1186340:CDS 35.0%
CTCTCTTGAATATCTTACCA+TGG - chr8_1:24508910-24508929 Msa1186340:CDS 35.0%
!! GAAAGTATTGATCCAGACAA+AGG - chr8_1:24509028-24509047 Msa1186340:CDS 35.0%
! AAGTAGTCTTTTCCTTTGTC+TGG + chr8_1:24509043-24509062 None:intergenic 35.0%
! AGTGTTGAATGGATACAAGA+GGG + chr8_1:24509081-24509100 None:intergenic 35.0%
CAAGTGTTCCAACTACTCAA+GGG - chr8_1:24506334-24506353 Msa1186340:CDS 40.0%
! TTGTTTCTCCCTTGAGTAGT+TGG + chr8_1:24506345-24506364 None:intergenic 40.0%
TCCTCAAAGATGCAGATAGA+AGG - chr8_1:24506431-24506450 Msa1186340:CDS 40.0%
CCTCAAAGATGCAGATAGAA+GGG - chr8_1:24506432-24506451 Msa1186340:CDS 40.0%
CAGTCACCAATGAAGGAATA+AGG - chr8_1:24506467-24506486 Msa1186340:CDS 40.0%
CAATGAAGGAATAAGGACCT+GGG - chr8_1:24506474-24506493 Msa1186340:CDS 40.0%
ATCCATATAGTCAATCCTCC+TGG - chr8_1:24506559-24506578 Msa1186340:CDS 40.0%
TTGAATACAGATCTGTGTCC+AGG + chr8_1:24506580-24506599 None:intergenic 40.0%
!! CGGGGAATCAAAGTTTTGAT+TGG + chr8_1:24506616-24506635 None:intergenic 40.0%
GTTGTCAATTCGCGTAATCA+AGG - chr8_1:24506669-24506688 Msa1186340:CDS 40.0%
GAGAGACAGAAAATGGAAGA+TGG - chr8_1:24506761-24506780 Msa1186340:CDS 40.0%
! ACTGTCTTCCCTTTTCATTG+AGG - chr8_1:24506795-24506814 Msa1186340:CDS 40.0%
! ACTATATGGTTGGTTGTTGG+AGG - chr8_1:24506855-24506874 Msa1186340:CDS 40.0%
! CTATATGGTTGGTTGTTGGA+GGG - chr8_1:24506856-24506875 Msa1186340:CDS 40.0%
AGTGATTTCAGTGGTAGGAA+TGG - chr8_1:24506894-24506913 Msa1186340:CDS 40.0%
GTGATTTCAGTGGTAGGAAT+GGG - chr8_1:24506895-24506914 Msa1186340:CDS 40.0%
TGATTTCAGTGGTAGGAATG+GGG - chr8_1:24506896-24506915 Msa1186340:CDS 40.0%
TTGGCTGTCAAAAACTAGCT+TGG + chr8_1:24506944-24506963 None:intergenic 40.0%
!!! GCTAGTTTTTGACAGCCAAA+AGG - chr8_1:24506945-24506964 Msa1186340:CDS 40.0%
TCTCAATCATACACTGTGAG+AGG - chr8_1:24507006-24507025 Msa1186340:CDS 40.0%
! TGCGTAACTTCTTTGGAAGA+GGG + chr8_1:24507077-24507096 None:intergenic 40.0%
! TTGCGTAACTTCTTTGGAAG+AGG + chr8_1:24507078-24507097 None:intergenic 40.0%
!! ACCTTTGTTGTTATTGGGCA+TGG + chr8_1:24507214-24507233 None:intergenic 40.0%
TGGAACTTGCATCATTCTAG+TGG + chr8_1:24507253-24507272 None:intergenic 40.0%
GTTGTGAACATGAACTGGAA+AGG + chr8_1:24507292-24507311 None:intergenic 40.0%
TGCAAGTTGTGAACATGAAC+TGG + chr8_1:24507297-24507316 None:intergenic 40.0%
AAGAGTTCCCATGCTTTATC+TGG + chr8_1:24507330-24507349 None:intergenic 40.0%
GTATTTAGATCTGAGCTTGG+TGG - chr8_1:24507360-24507379 Msa1186340:CDS 40.0%
GGTGAATCAAAATTTGAGCC+TGG - chr8_1:24507512-24507531 Msa1186340:CDS 40.0%
TCAAAATTTGAGCCTGGAGT+TGG - chr8_1:24507518-24507537 Msa1186340:CDS 40.0%
CAAAATTTGAGCCTGGAGTT+GGG - chr8_1:24507519-24507538 Msa1186340:CDS 40.0%
! ATGCATGGTTTCAAGTAGTG+AGG + chr8_1:24507603-24507622 None:intergenic 40.0%
GATCAATAGCATAGTCCTCT+GGG + chr8_1:24507644-24507663 None:intergenic 40.0%
TGATCAATAGCATAGTCCTC+TGG + chr8_1:24507645-24507664 None:intergenic 40.0%
ACTCAACAATGGATAGCTGA+AGG - chr8_1:24507675-24507694 Msa1186340:CDS 40.0%
CTCAACAATGGATAGCTGAA+GGG - chr8_1:24507676-24507695 Msa1186340:CDS 40.0%
AAGAAGTTGGGTTCATGTCT+TGG - chr8_1:24507815-24507834 Msa1186340:CDS 40.0%
GTCAAGTCCATGACTTATTG+CGG - chr8_1:24507844-24507863 Msa1186340:CDS 40.0%
TCAAGTCCATGACTTATTGC+GGG - chr8_1:24507845-24507864 Msa1186340:CDS 40.0%
TGTCATTGTGTGCATGATGA+TGG - chr8_1:24507903-24507922 Msa1186340:CDS 40.0%
CAACACATTGTTGTGGTTAG+TGG + chr8_1:24507970-24507989 None:intergenic 40.0%
AGCTCTTCAACACATTGTTG+TGG + chr8_1:24507977-24507996 None:intergenic 40.0%
GTAAACTGTGTTCGAAGTCT+AGG - chr8_1:24508063-24508082 Msa1186340:CDS 40.0%
CGTGTTCTTCCTAAATCAGT+TGG - chr8_1:24508191-24508210 Msa1186340:CDS 40.0%
! GTGAGCTTGTTTATCTCACT+TGG + chr8_1:24508272-24508291 None:intergenic 40.0%
TATGTGGAGGTAAATCATGG+GGG - chr8_1:24508416-24508435 Msa1186340:CDS 40.0%
AGGCATGTAAGAAGAGAACA+TGG - chr8_1:24508494-24508513 Msa1186340:CDS 40.0%
GGCATGTAAGAAGAGAACAT+GGG - chr8_1:24508495-24508514 Msa1186340:CDS 40.0%
GCATGTAAGAAGAGAACATG+GGG - chr8_1:24508496-24508515 Msa1186340:CDS 40.0%
!! AAGTTTTTCAGTGACTGCAG+TGG + chr8_1:24508740-24508759 None:intergenic 40.0%
TCAAAGTTCCATCGCCTATA+AGG + chr8_1:24508889-24508908 None:intergenic 40.0%
!! GAGTGTTGAATGGATACAAG+AGG + chr8_1:24509082-24509101 None:intergenic 40.0%
GCAAGTGTTCCAACTACTCA+AGG - chr8_1:24506333-24506352 Msa1186340:CDS 45.0%
CCCTTCTATCTGCATCTTTG+AGG + chr8_1:24506435-24506454 None:intergenic 45.0%
GATGAAGCAGTCACCAATGA+AGG - chr8_1:24506460-24506479 Msa1186340:CDS 45.0%
CCAGGTCCTTATTCCTTCAT+TGG + chr8_1:24506476-24506495 None:intergenic 45.0%
CCAATGAAGGAATAAGGACC+TGG - chr8_1:24506473-24506492 Msa1186340:CDS 45.0%
TTCTCTCATATGCTTCACCC+AGG + chr8_1:24506494-24506513 None:intergenic 45.0%
TGACTATATGGATCAGCCGA+AGG + chr8_1:24506552-24506571 None:intergenic 45.0%
GTCCAGGAGGATTGACTATA+TGG + chr8_1:24506564-24506583 None:intergenic 45.0%
AATACAGATCTGTGTCCAGG+AGG + chr8_1:24506577-24506596 None:intergenic 45.0%
!!! ACTGCTGTTGCTTTTGCTTG+AGG + chr8_1:24506740-24506759 None:intergenic 45.0%
TCAAGCAAAAGCAACAGCAG+TGG - chr8_1:24506739-24506758 Msa1186340:CDS 45.0%
AGCAGTGGAGAGACAGAAAA+TGG - chr8_1:24506754-24506773 Msa1186340:CDS 45.0%
ATGAAAAGGGAAGACAGTCG+AGG + chr8_1:24506793-24506812 None:intergenic 45.0%
TGTAGGATTTGAAGGCCCAA+AGG - chr8_1:24506828-24506847 Msa1186340:CDS 45.0%
GGCCCAAAGGAAGAACTATA+TGG - chr8_1:24506841-24506860 Msa1186340:CDS 45.0%
GATTTCAGTGGTAGGAATGG+GGG - chr8_1:24506897-24506916 Msa1186340:CDS 45.0%
ATTTCAGTGGTAGGAATGGG+GGG - chr8_1:24506898-24506917 Msa1186340:CDS 45.0%
! AAAAACTAGCTTGGCGAGAG+TGG + chr8_1:24506935-24506954 None:intergenic 45.0%
ACAGCCAAAAGGTAGCAACA+CGG - chr8_1:24506956-24506975 Msa1186340:CDS 45.0%
!! CAAACCGTGTTGCTACCTTT+TGG + chr8_1:24506963-24506982 None:intergenic 45.0%
! CTTCTTTGGAAGAGGGTCTT+TGG + chr8_1:24507070-24507089 None:intergenic 45.0%
GCAAGAAGATATTTGCGACC+AGG - chr8_1:24507179-24507198 Msa1186340:CDS 45.0%
GCCATGCCCAATAACAACAA+AGG - chr8_1:24507210-24507229 Msa1186340:CDS 45.0%
CAAAGCTAACATCCGAGACT+TGG + chr8_1:24507782-24507801 None:intergenic 45.0%
! CAAGTCTCGGATGTTAGCTT+TGG - chr8_1:24507780-24507799 Msa1186340:CDS 45.0%
TCACTTCCCGCAATAAGTCA+TGG + chr8_1:24507854-24507873 None:intergenic 45.0%
!! TGATGATGGTGAATCACTCG+TGG - chr8_1:24507917-24507936 Msa1186340:CDS 45.0%
!! TGGGTCATTGGAGCATTTTG+TGG - chr8_1:24508040-24508059 Msa1186340:CDS 45.0%
!! GGGTCATTGGAGCATTTTGT+GGG - chr8_1:24508041-24508060 Msa1186340:CDS 45.0%
TCACTGTTGGGCTTTACATC+TGG - chr8_1:24508341-24508360 Msa1186340:CDS 45.0%
CTTTACATCTGGTGTGCAGA+TGG - chr8_1:24508352-24508371 Msa1186340:CDS 45.0%
TCTGGTGTGCAGATGGAAAA+AGG - chr8_1:24508359-24508378 Msa1186340:CDS 45.0%
AGAACATGGGGATGCGTTAA+GGG - chr8_1:24508508-24508527 Msa1186340:CDS 45.0%
AATTGAAGCCGCTGAAGTTG+GGG + chr8_1:24508626-24508645 None:intergenic 45.0%
CAATTGAAGCCGCTGAAGTT+GGG + chr8_1:24508627-24508646 None:intergenic 45.0%
TCAATTGAAGCCGCTGAAGT+TGG + chr8_1:24508628-24508647 None:intergenic 45.0%
CTATGGGATGATGCCTATGA+TGG - chr8_1:24508782-24508801 Msa1186340:CDS 45.0%
TGAACCTCACTCGCTTGAAT+AGG - chr8_1:24508852-24508871 Msa1186340:CDS 45.0%
GAACCTCACTCGCTTGAATA+GGG - chr8_1:24508853-24508872 Msa1186340:CDS 45.0%
TTACCCTATTCAAGCGAGTG+AGG + chr8_1:24508859-24508878 None:intergenic 45.0%
GTATCCATTCAACACTCGAG+TGG - chr8_1:24509085-24509104 Msa1186340:CDS 45.0%
AACTGCAGTAGCATCAGCCT+TGG - chr8_1:24506309-24506328 Msa1186340:CDS 50.0%
ACTGCAGTAGCATCAGCCTT+GGG - chr8_1:24506310-24506329 Msa1186340:CDS 50.0%
TAGTTGGAACACTTGCCCCA+AGG + chr8_1:24506329-24506348 None:intergenic 50.0%
TGAAATCACTGTGCGCTCAG+CGG + chr8_1:24506884-24506903 None:intergenic 50.0%
TGAGCGCACAGTGATTTCAG+TGG - chr8_1:24506885-24506904 Msa1186340:CDS 50.0%
CGCACAGTGATTTCAGTGGT+AGG - chr8_1:24506889-24506908 Msa1186340:CDS 50.0%
TGGTAGGAATGGGGGGTTTA+GGG - chr8_1:24506905-24506924 Msa1186340:CDS 50.0%
TGGGCATGGCAAATTCAACC+TGG + chr8_1:24507200-24507219 None:intergenic 50.0%
CCAATGGCTACAATTGCCAG+TGG + chr8_1:24507447-24507466 None:intergenic 50.0%
CCACTGGCAATTGTAGCCAT+TGG - chr8_1:24507444-24507463 Msa1186340:CDS 50.0%
CTGGCAATTGTAGCCATTGG+TGG - chr8_1:24507447-24507466 Msa1186340:CDS 50.0%
AACTCCAGAGCAAGTTGCAG+AGG - chr8_1:24507722-24507741 Msa1186340:CDS 50.0%
! TACTCCTCTGCAACTTGCTC+TGG + chr8_1:24507729-24507748 None:intergenic 50.0%
GAGAAGTCTGGTCCAAGTCT+CGG - chr8_1:24507767-24507786 Msa1186340:CDS 50.0%
GAGAACATGGGGATGCGTTA+AGG - chr8_1:24508507-24508526 Msa1186340:CDS 50.0%
CTGCAGTAGCATCAGCCTTG+GGG - chr8_1:24506311-24506330 Msa1186340:CDS 55.0%
GTGGTAGGAATGGGGGGTTT+AGG - chr8_1:24506904-24506923 Msa1186340:CDS 55.0%
TTTGCCACAGCCTCAAGCTC+CGG + chr8_1:24507396-24507415 None:intergenic 55.0%
GAGCATTACGTCCCAACTCC+AGG + chr8_1:24507533-24507552 None:intergenic 55.0%
GATGGTGAATCACTCGTGGC+TGG - chr8_1:24507921-24507940 Msa1186340:CDS 55.0%
CATCTCCACCCCAACTTCAG+CGG - chr8_1:24508615-24508634 Msa1186340:CDS 55.0%
!! TGAGGGTACCTCCTTCAGCT+GGG + chr8_1:24508945-24508964 None:intergenic 55.0%
ACCAAGGACCTGATGCCTGA+GGG + chr8_1:24508962-24508981 None:intergenic 55.0%
AACCAAGGACCTGATGCCTG+AGG + chr8_1:24508963-24508982 None:intergenic 55.0%
TGAAGCCGCTGAAGTTGGGG+TGG + chr8_1:24508623-24508642 None:intergenic 60.0%
CAGCTGGGGGATTCTGTCCA+TGG + chr8_1:24508930-24508949 None:intergenic 60.0%
GGACAGAATCCCCCAGCTGA+AGG - chr8_1:24508931-24508950 Msa1186340:CDS 60.0%
CAGAATCCCCCAGCTGAAGG+AGG - chr8_1:24508934-24508953 Msa1186340:CDS 60.0%
! AGGGTACCTCCTTCAGCTGG+GGG + chr8_1:24508943-24508962 None:intergenic 60.0%
!! GAGGGTACCTCCTTCAGCTG+GGG + chr8_1:24508944-24508963 None:intergenic 60.0%
!! CTGAGGGTACCTCCTTCAGC+TGG + chr8_1:24508946-24508965 None:intergenic 60.0%
!! CAGCTGAAGGAGGTACCCTC+AGG - chr8_1:24508944-24508963 Msa1186340:CDS 60.0%
!! AGGAGGTACCCTCAGGCATC+AGG - chr8_1:24508951-24508970 Msa1186340:CDS 60.0%
ACCCTCAGGCATCAGGTCCT+TGG - chr8_1:24508958-24508977 Msa1186340:CDS 60.0%
!! CGGGCCACTCGAGTGTTGAA+TGG + chr8_1:24509092-24509111 None:intergenic 60.0%
! GCTTGGTGGGCGTTGTCCAC+CGG - chr8_1:24507374-24507393 Msa1186340:CDS 65.0%
GCGTTGTCCACCGGAGCTTG+AGG - chr8_1:24507383-24507402 Msa1186340:CDS 65.0%
TCCACCGGAGCTTGAGGCTG+TGG - chr8_1:24507389-24507408 Msa1186340:CDS 65.0%
GCCACAGCCTCAAGCTCCGG+TGG + chr8_1:24507393-24507412 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 24506301 24509165 24506301 ID=Msa1186340;Name=Msa1186340
chr8_1 mRNA 24506301 24509165 24506301 ID=Msa1186340-mRNA-1;Parent=Msa1186340;Name=Msa1186340-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|-1|0|1|-1|1|1|0|954
chr8_1 exon 24506301 24509165 24506301 ID=Msa1186340-mRNA-1:exon:8904;Parent=Msa1186340-mRNA-1
chr8_1 CDS 24506301 24509165 24506301 ID=Msa1186340-mRNA-1:cds;Parent=Msa1186340-mRNA-1
Gene Sequence

>Msa1186340

ATGGCAGAAACTGCAGTAGCATCAGCCTTGGGGCAAGTGTTCCAACTACTCAAGGGAGAAACAAATCTTCTAAAAGATGTACACAAAGATTTTTCAGAGATCAAAGATGAACTAGAAAGCATTCAAGTCTTCCTCAAAGATGCAGATAGAAGGGCAGCAGATGAAGCAGTCACCAATGAAGGAATAAGGACCTGGGTGAAGCATATGAGAGAAGCATCATTTCGAATCGAAGATGTAATTGATGAATACCTTCGGCTGATCCATATAGTCAATCCTCCTGGACACAGATCTGTATTCAACAAGATTAGAAGCCCAATCAAAACTTTGATTCCCCGTCATAAAATTGCTTCAGAGATTCAGGACATCAAGTTGTCAATTCGCGTAATCAAGGAAAGAAGTGAGAGGTATAACTTTCAAATTTTAGACAAACAAGGATCCTCAAGCAAAAGCAACAGCAGTGGAGAGACAGAAAATGGAAGATGGTGTGATCCTCGACTGTCTTCCCTTTTCATTGAGGAAACAGAAATTGTAGGATTTGAAGGCCCAAAGGAAGAACTATATGGTTGGTTGTTGGAGGGTGCCGCTGAGCGCACAGTGATTTCAGTGGTAGGAATGGGGGGTTTAGGGAAAACCACTCTCGCCAAGCTAGTTTTTGACAGCCAAAAGGTAGCAACACGGTTTGATTGTCGAGCTTTCATCGTAGTTTCTCAATCATACACTGTGAGAGGATTACTGATCAAAATGATGGAGCAATTTTGTCTGGAAACCAAAGACCCTCTTCCAAAGAAGTTACGCAAAATGGATGACATGTCACTGATTATAGAAGTAAGGAAATACCTCGAACATAAAAGGTATTTGATAATTTTTGATGATGTATGGCAAGAAGATATTTGCGACCAGGTTGAATTTGCCATGCCCAATAACAACAAAGGTAGTAGGATCATAATCACCACTAGAATGATGCAAGTTCCAGATTTTTTCAAGAAATCCTTTCCAGTTCATGTTCACAACTTGCAACTTTTGACTCCAGATAAAGCATGGGAACTCTTCTGCAAGAAAGTATTTAGATCTGAGCTTGGTGGGCGTTGTCCACCGGAGCTTGAGGCTGTGGCAAAAGAAATTGTTCAAAAATTCAAGCAACTACCACTGGCAATTGTAGCCATTGGTGGTTTACTTTCAACAAAATCCAAAACCATAATTGAATGGCAAAAGGTGAATCAAAATTTGAGCCTGGAGTTGGGACGTAATGCTCATTTAACGAGTCTAACAAAGATTTTGTCGCTTAGTTATGATGGTCTGCCTCACTACTTGAAACCATGCATTTTGTATTTTGGTTTATACCCAGAGGACTATGCTATTGATCATGAGAGATTAACTCAACAATGGATAGCTGAAGGGTTTGTTAAATCTGATGGGAGAAGAACTCCAGAGCAAGTTGCAGAGGAGTACGTGTCTGAATTGATTCAGAGAAGTCTGGTCCAAGTCTCGGATGTTAGCTTTGGTTTATTGACTCAAAGAAGTTGGGTTCATGTCTTGGATAAATGTCAAGTCCATGACTTATTGCGGGAAGTGATCATTAGAAAAATGAAGGATTTAAGTTTCTGTCATTGTGTGCATGATGATGGTGAATCACTCGTGGCTGGAAAAACTAGACGTCTATCTATAACCACTAACCACAACAATGTGTTGAAGAGCTCCAACATGAATCATTTATGTGCTATTCATGTTTTTGATAAAGGTGGGTCATTGGAGCATTTTGTGGGTAAACTGTGTTCGAAGTCTAGGATTTTGAAGGTACTTGACATTGAAGGTACATCGTTGAATCATATTCCTAAAAATTTGGGAAATCTTTTTCACTTAAGGTTCTTAAACCTAAGGAATACAAAAATACGTGTTCTTCCTAAATCAGTTGGTGAACTACATAACTTAGAGACATTGGATATAAGATACACACTTGTGCATGAGATACCAAGTGAGATAAACAAGCTCACAAAGCTACGTAACCTTTTTGCCTTAAATCGTAACTTTGAAGAAAAGTATTCACTGTTGGGCTTTACATCTGGTGTGCAGATGGAAAAAGGTATTAAAAACATGGTTTCCCTACAAAAACTTTATTATGTGGAGGTAAATCATGGGGGTGTAGATCTCATTCAAGAGATGAAAATGTTAAGTCAGTTAAGGAGGTTAGGTTTAAGGCATGTAAGAAGAGAACATGGGGATGCGTTAAGGGCTGTTGTAGTAGAATTGAAACACCTTGAAGATCTGAATATCACTACAATTGGTGAGGATGAAACCATTAACTTGAATTTTGTCTCATCTCCACCCCAACTTCAGCGGCTTCAATTGAAAGCTAAGCTAGATATATTGCCTGAATGGATTCCAAAACTTGAGTATCTTGTTGAGATAAAGCTAGCTTTATCTAAGTTGACAAATGATCCACTGCAGTCACTGAAAAACTTGCCAAATCTGTTGAATTTCGCTCTATGGGATGATGCCTATGATGGTGAAATTTTGCATTTTCAAATTGGAGGCTTTCTAAAATTGAAGAGACTGAACCTCACTCGCTTGAATAGGGTAAATTCAATCCTTATAGGCGATGGAACTTTGATCTCTCTTGAATATCTTACCATGGACAGAATCCCCCAGCTGAAGGAGGTACCCTCAGGCATCAGGTCCTTGGTTAATCTCAAAGCTATTAACTTCACTGAAATGCCAGATGAATTTGTTGAAAGTATTGATCCAGACAAAGGAAAAGACTACTTGATTATCAAGCATGTCCCTCTTGTATCCATTCAACACTCGAGTGGCCCGAAATTCTTTGATTATGCGATTCACACTATTCACTCATCTTCCAAGCAGTCATAA

Protein sequence

>Msa1186340

MAETAVASALGQVFQLLKGETNLLKDVHKDFSEIKDELESIQVFLKDADRRAADEAVTNEGIRTWVKHMREASFRIEDVIDEYLRLIHIVNPPGHRSVFNKIRSPIKTLIPRHKIASEIQDIKLSIRVIKERSERYNFQILDKQGSSSKSNSSGETENGRWCDPRLSSLFIEETEIVGFEGPKEELYGWLLEGAAERTVISVVGMGGLGKTTLAKLVFDSQKVATRFDCRAFIVVSQSYTVRGLLIKMMEQFCLETKDPLPKKLRKMDDMSLIIEVRKYLEHKRYLIIFDDVWQEDICDQVEFAMPNNNKGSRIIITTRMMQVPDFFKKSFPVHVHNLQLLTPDKAWELFCKKVFRSELGGRCPPELEAVAKEIVQKFKQLPLAIVAIGGLLSTKSKTIIEWQKVNQNLSLELGRNAHLTSLTKILSLSYDGLPHYLKPCILYFGLYPEDYAIDHERLTQQWIAEGFVKSDGRRTPEQVAEEYVSELIQRSLVQVSDVSFGLLTQRSWVHVLDKCQVHDLLREVIIRKMKDLSFCHCVHDDGESLVAGKTRRLSITTNHNNVLKSSNMNHLCAIHVFDKGGSLEHFVGKLCSKSRILKVLDIEGTSLNHIPKNLGNLFHLRFLNLRNTKIRVLPKSVGELHNLETLDIRYTLVHEIPSEINKLTKLRNLFALNRNFEEKYSLLGFTSGVQMEKGIKNMVSLQKLYYVEVNHGGVDLIQEMKMLSQLRRLGLRHVRREHGDALRAVVVELKHLEDLNITTIGEDETINLNFVSSPPQLQRLQLKAKLDILPEWIPKLEYLVEIKLALSKLTNDPLQSLKNLPNLLNFALWDDAYDGEILHFQIGGFLKLKRLNLTRLNRVNSILIGDGTLISLEYLTMDRIPQLKEVPSGIRSLVNLKAINFTEMPDEFVESIDPDKGKDYLIIKHVPLVSIQHSSGPKFFDYAIHTIHSSSKQS*