AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1068390


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068390 MtrunA17_Chr7g0250691 97.778 270 6 0 1 270 1 270 0.0 551
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1068390 AT1G02100.3 72.015 268 66 2 5 272 1 259 9.98e-141 399
Msa1068390 AT1G02100.1 72.015 268 66 2 5 272 1 259 9.98e-141 399
Msa1068390 AT1G02100.2 72.015 268 66 2 5 272 1 259 1.26e-140 398

Find 61 sgRNAs with CRISPR-Local

Find 432 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATAGTATCTGCGTCTTTAT+TGG 0.202675 7_2:+63362477 None:intergenic
AAATTGACGTGATATTTAAT+TGG 0.262117 7_2:+63356854 None:intergenic
CATCCAGGTAACAAGTAAAA+AGG 0.327516 7_2:-63360941 Msa1068390:intron
TTGTAGGTCATGTGTGAAAA+AGG 0.332658 7_2:-63362745 Msa1068390:intron
ATAGTATCTGCGTCTTTATT+GGG 0.334293 7_2:+63362478 None:intergenic
ATAATCGGAGATCTTCTTAC+AGG 0.352376 7_2:+63362681 None:intergenic
ATCCATCCAGATGATGCTTT+TGG 0.356856 7_2:-63359224 Msa1068390:CDS
ACAACTTCGTGACTTGAATC+TGG 0.377061 7_2:+63359386 None:intergenic
GAAACTGGTAGAGAAATTTC+CGG 0.393824 7_2:+63362532 None:intergenic
TGAAGGTTACTTTGCTCGTT+GGG 0.405577 7_2:-63362562 Msa1068390:intron
GCAGATGATCAGAAATTTAG+AGG 0.407200 7_2:-63359198 Msa1068390:intron
TGCTGACCAAAAGCATCATC+TGG 0.407645 7_2:+63359218 None:intergenic
CGTGCGAGCGTACAATTTAC+TGG 0.413604 7_2:+63363850 None:intergenic
ATCTTACCACGATTAATAAT+CGG 0.432639 7_2:+63362666 None:intergenic
GTGAAACAGCCTCCATTTCA+AGG 0.435679 7_2:-63360876 Msa1068390:CDS
AAGTCACGAAGTTGTTGGTT+GGG 0.441637 7_2:-63359378 Msa1068390:CDS
TTTATATCACGCAAGTCTGC+AGG 0.460139 7_2:+63360385 None:intergenic
GGCGGAAGCGTCGTCGTTGG+TGG 0.461549 7_2:+63363871 None:intergenic
ATGAAGGTTACTTTGCTCGT+TGG 0.462272 7_2:-63362563 Msa1068390:intron
CATTCTGCAATTATAAAAGT+TGG 0.463383 7_2:+63359428 None:intergenic
GCACTACTTACCCCTTGAAA+TGG 0.465292 7_2:+63360864 None:intergenic
GATTCAAGTCACGAAGTTGT+TGG 0.467158 7_2:-63359383 Msa1068390:CDS
CATGAAATACCTGCCATCCT+TGG 0.472289 7_2:+63357732 None:intergenic
ACTGTTGTCGATGCGTGAAT+CGG 0.479296 7_2:+63363913 None:intergenic
TGCTGTTGAAAATGTTCGGC+AGG 0.483957 7_2:+63359355 None:intergenic
TTGCTCGTTGGGCTGCCCTC+CGG 0.486240 7_2:-63362551 Msa1068390:CDS
CAAGTCACGAAGTTGTTGGT+TGG 0.496700 7_2:-63359379 Msa1068390:CDS
ACAGTGCTGTTGAAAATGTT+CGG 0.499849 7_2:+63359351 None:intergenic
CTGCAATTATAAAAGTTGGC+AGG 0.510055 7_2:+63359432 None:intergenic
ACATTCATTTATTTGTGAGA+AGG 0.526997 7_2:-63362704 Msa1068390:CDS
CCTTGGATCCATCTCAGTAA+TGG 0.532406 7_2:+63360342 None:intergenic
GTGTCGCGGATGTCCTCTGT+TGG 0.532985 7_2:-63357804 Msa1068390:CDS
TGTCGCGGATGTCCTCTGTT+GGG 0.539944 7_2:-63357803 Msa1068390:CDS
GACCAAAAGCATCATCTGGA+TGG 0.540152 7_2:+63359222 None:intergenic
TACACCAACTTTACATGCAA+AGG 0.540339 7_2:-63357771 Msa1068390:CDS
CATCATAACCATTACTGAGA+TGG 0.545001 7_2:-63360350 Msa1068390:CDS
AGTCAATTGAAGAATAAACT+TGG 0.549546 7_2:-63360898 Msa1068390:CDS
GTTTCTTCGTTATTCAACCA+TGG 0.556717 7_2:-63363948 Msa1068390:exon
AGAATGTGTTCTGATTTACT+TGG 0.566293 7_2:-63359411 Msa1068390:CDS
TGTGGAAGTGGACTTTAAAG+AGG 0.570011 7_2:-63361213 Msa1068390:intron
TGAAACAGCCTCCATTTCAA+GGG 0.572201 7_2:-63360875 Msa1068390:CDS
ACCACATTTATATGTGGAAG+TGG 0.576623 7_2:-63361225 Msa1068390:CDS
ACTGGCGGAAGCGTCGTCGT+TGG 0.577080 7_2:+63363868 None:intergenic
CTACTTACCCCTTGAAATGG+AGG 0.585507 7_2:+63360867 None:intergenic
CAGATACTATCACTTGGAGC+AGG 0.588756 7_2:-63362465 Msa1068390:CDS
GAAAGCACCACATTTATATG+TGG 0.593298 7_2:-63361231 Msa1068390:CDS
TTCAACCATGGCGGATACAG+TGG 0.595052 7_2:-63363936 Msa1068390:exon
TTATATCACGCAAGTCTGCA+GGG 0.602424 7_2:+63360386 None:intergenic
ATCGGCCACTGTATCCGCCA+TGG 0.603474 7_2:+63363931 None:intergenic
CCATTACTGAGATGGATCCA+AGG 0.618047 7_2:-63360342 Msa1068390:intron
AAGACGCAGATACTATCACT+TGG 0.623489 7_2:-63362471 Msa1068390:CDS
TCCACTTCCACATATAAATG+TGG 0.634696 7_2:+63361224 None:intergenic
AGATCTCCGATTATTAATCG+TGG 0.658165 7_2:-63362672 Msa1068390:intron
GAAACAGCCTCCATTTCAAG+GGG 0.674160 7_2:-63360874 Msa1068390:intron
CTGGTAGAGAAATTTCCGGA+GGG 0.686441 7_2:+63362536 None:intergenic
ACTGGTAGAGAAATTTCCGG+AGG 0.699047 7_2:+63362535 None:intergenic
CGACAACAGTAACACTGCGG+CGG 0.708713 7_2:-63363900 Msa1068390:CDS
TCTTCGTTATTCAACCATGG+CGG 0.721285 7_2:-63363945 Msa1068390:exon
GCGAGCGTACAATTTACTGG+CGG 0.759993 7_2:+63363853 None:intergenic
GTAGCATAGATACCCAACAG+AGG 0.778818 7_2:+63357791 None:intergenic
CATCGACAACAGTAACACTG+CGG 0.817282 7_2:-63363903 Msa1068390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTATATATATATATATATAA+AGG + chr7_2:63358994-63359013 None:intergenic 0.0%
!! TTTATTATTATATAAATAAA+TGG - chr7_2:63361050-63361069 Msa1068390:intron 0.0%
!!! ATTTTTTTATTGTTTTTTTG+AGG - chr7_2:63358820-63358839 Msa1068390:intron 10.0%
!! ATATATATATATATAAAGGA+CGG + chr7_2:63358990-63359009 None:intergenic 10.0%
!! AAATAAATGGTTATTTATTA+AGG - chr7_2:63361063-63361082 Msa1068390:intron 10.0%
!! AAAAATAGAAATATTGTATT+GGG + chr7_2:63361169-63361188 None:intergenic 10.0%
!! TAAAAATAGAAATATTGTAT+TGG + chr7_2:63361170-63361189 None:intergenic 10.0%
!! CTATAAACATATTTATTTAT+GGG + chr7_2:63361232-63361251 None:intergenic 10.0%
!! TCTATAAACATATTTATTTA+TGG + chr7_2:63361233-63361252 None:intergenic 10.0%
!! AAAAAATAATAATTATAGAC+TGG - chr7_2:63363334-63363353 Msa1068390:intron 10.0%
!! AAATATTAATTCCTATTTAT+AGG + chr7_2:63363510-63363529 None:intergenic 10.0%
!!! AATCATATGTTTTTATTGTA+AGG + chr7_2:63357591-63357610 None:intergenic 15.0%
!!! TTAAGTACTAAAAGTATTTT+TGG + chr7_2:63357834-63357853 None:intergenic 15.0%
!!! TAGATTTTATTCTTATATGA+TGG - chr7_2:63358063-63358082 Msa1068390:intron 15.0%
!!! ATTTTTTATTTCATCTTTGT+TGG - chr7_2:63358637-63358656 Msa1068390:intron 15.0%
!!! ATTTAGATTATCAAATGTTT+TGG - chr7_2:63358751-63358770 Msa1068390:intron 15.0%
!!! TACTTATGTAAATTTTTGTA+CGG - chr7_2:63358873-63358892 Msa1068390:intron 15.0%
!! TATATATATATATAAAGGAC+GGG + chr7_2:63358989-63359008 None:intergenic 15.0%
!! AGTACATATATAAATATGTA+AGG - chr7_2:63359048-63359067 Msa1068390:intron 15.0%
!!! AGATTTATTTTTGTATCTAT+GGG + chr7_2:63359385-63359404 None:intergenic 15.0%
!!! ACATGTTTAAAATCTTTTAT+TGG - chr7_2:63359588-63359607 Msa1068390:intron 15.0%
!! CTTAATTTATAGTTGTTTAT+GGG - chr7_2:63359711-63359730 Msa1068390:intron 15.0%
!!! AACATTTTGAAATATATTGA+TGG - chr7_2:63360767-63360786 Msa1068390:intron 15.0%
!!! ATTTTAAAATTCTAGATTGT+AGG + chr7_2:63360854-63360873 None:intergenic 15.0%
!! TTATATTTAAGAAATGGAAA+TGG - chr7_2:63360960-63360979 Msa1068390:intron 15.0%
!!! TTAAAAAATTGCTGAATTTT+AGG + chr7_2:63361110-63361129 None:intergenic 15.0%
!!! TATGATATTATATTTGCTAA+AGG - chr7_2:63361257-63361276 Msa1068390:intron 15.0%
!!! ACTTAAATTTATTTGAGATT+TGG - chr7_2:63362859-63362878 Msa1068390:intron 15.0%
!!! ATTTTCATTTTTGTTGCATT+TGG - chr7_2:63357121-63357140 Msa1068390:intron 20.0%
!! AAAAATTTCAGTGATTTAAG+GGG + chr7_2:63357232-63357251 None:intergenic 20.0%
!! CAAAAATTTCAGTGATTTAA+GGG + chr7_2:63357233-63357252 None:intergenic 20.0%
!! TTGAATATATTCACATGTAT+CGG - chr7_2:63357673-63357692 Msa1068390:intron 20.0%
!! AAACAATTGAAAAGATGTTA+TGG - chr7_2:63357767-63357786 Msa1068390:CDS 20.0%
!! TAGTACTTAATGATATAGAT+TGG - chr7_2:63357844-63357863 Msa1068390:intron 20.0%
!! ATTCAACATTAAAAGAACTT+TGG - chr7_2:63357882-63357901 Msa1068390:intron 20.0%
!! AAATCTATAATTCATACAAG+AGG + chr7_2:63358050-63358069 None:intergenic 20.0%
!!! ACTATAATTTCCTCTTATTT+TGG - chr7_2:63358501-63358520 Msa1068390:intron 20.0%
!!! ATTTGATAATCTAAATCTCT+AGG + chr7_2:63358747-63358766 None:intergenic 20.0%
!!! TTTTAACTTAAATTAGTGAG+TGG - chr7_2:63359014-63359033 Msa1068390:intron 20.0%
!!! CAGATTTATTTTTGTATCTA+TGG + chr7_2:63359386-63359405 None:intergenic 20.0%
!! CCATAAACAACTATAAATTA+AGG + chr7_2:63359713-63359732 None:intergenic 20.0%
!! CCTTAATTTATAGTTGTTTA+TGG - chr7_2:63359710-63359729 Msa1068390:intron 20.0%
!! TTAACTTTCTATATTAATCG+TGG + chr7_2:63359875-63359894 None:intergenic 20.0%
!! CAAAATCAAAATTTCTCTAA+TGG + chr7_2:63360238-63360257 None:intergenic 20.0%
!! CAATATATTTCAAAATGTTC+TGG + chr7_2:63360766-63360785 None:intergenic 20.0%
!!! TATATGCAATGTTATTTCTA+TGG - chr7_2:63361010-63361029 Msa1068390:intron 20.0%
!! ATGAATCAATATATTAAACC+TGG + chr7_2:63361384-63361403 None:intergenic 20.0%
!!! AGATTACAATTGATTGATTT+CGG - chr7_2:63361722-63361741 Msa1068390:intron 20.0%
!! TAGTATAATGAACAAAAAGA+AGG + chr7_2:63361846-63361865 None:intergenic 20.0%
!!! TTCTCAATAGAAACATTTTA+GGG - chr7_2:63362157-63362176 Msa1068390:intron 20.0%
!! AAGACATTCAATCAAATTAT+GGG + chr7_2:63362678-63362697 None:intergenic 20.0%
!! CAAATAAATTTAAGTCTCTA+AGG + chr7_2:63362854-63362873 None:intergenic 20.0%
!! ATTATCAATTGTCAATGTAT+TGG - chr7_2:63362981-63363000 Msa1068390:intron 20.0%
!! AAAAAAGATAAACCATGTTA+CGG + chr7_2:63363018-63363037 None:intergenic 20.0%
!!! TGCAAAGGAAAAATTATTTT+TGG - chr7_2:63363097-63363116 Msa1068390:intron 20.0%
!!! ATTTATTTAGAGTATCTCTT+AGG - chr7_2:63363421-63363440 Msa1068390:intron 20.0%
!! CAAATCATCATGATAATAAT+AGG + chr7_2:63363458-63363477 None:intergenic 20.0%
!! CAATTACTCTATCATAAATA+AGG + chr7_2:63363483-63363502 None:intergenic 20.0%
!! GTAATTGTATTCCTATAAAT+AGG - chr7_2:63363496-63363515 Msa1068390:intron 20.0%
!!! TTGTGAGATTTTAGATAAAA+TGG + chr7_2:63363574-63363593 None:intergenic 20.0%
! AGTGATTGATTGATCAATAA+AGG + chr7_2:63357040-63357059 None:intergenic 25.0%
! CCAAAAATTTCAGTGATTTA+AGG + chr7_2:63357234-63357253 None:intergenic 25.0%
!! CCTTAAATCACTGAAATTTT+TGG - chr7_2:63357231-63357250 Msa1068390:intron 25.0%
!! TTTTTATTGTAAGGTGTGTT+TGG + chr7_2:63357582-63357601 None:intergenic 25.0%
!!! GTACTAAAAGTATTTTTGGA+TGG + chr7_2:63357830-63357849 None:intergenic 25.0%
! AAAACCAATGTTCAATTACA+TGG + chr7_2:63357992-63358011 None:intergenic 25.0%
! ACATTCATTTATTTGTGAGA+AGG - chr7_2:63358149-63358168 Msa1068390:intron 25.0%
! ATCTTACCACGATTAATAAT+CGG + chr7_2:63358190-63358209 None:intergenic 25.0%
!!! TTAACAAGCAACTTGTTTTA+CGG + chr7_2:63358251-63358270 None:intergenic 25.0%
! CTATAATTGTTTGAGTATGA+AGG - chr7_2:63358274-63358293 Msa1068390:intron 25.0%
! GAGAAAAAGAACAATGAAAA+TGG - chr7_2:63358352-63358371 Msa1068390:intron 25.0%
!!! AGTGCAATTTGTTTTATAAC+AGG - chr7_2:63358604-63358623 Msa1068390:intron 25.0%
! TACGGAAAAATAATAGACAA+TGG - chr7_2:63358891-63358910 Msa1068390:intron 25.0%
!!! GTATAAAAAGCTTTGAAAAC+AGG + chr7_2:63358967-63358986 None:intergenic 25.0%
! TTAAATACACACCAAAAACT+TGG + chr7_2:63359250-63359269 None:intergenic 25.0%
! TAATTGGCAACAATGTATAA+AGG + chr7_2:63359483-63359502 None:intergenic 25.0%
! TAGCAAAAAGGTTACAAAAT+TGG + chr7_2:63359515-63359534 None:intergenic 25.0%
!!! GTTTAAAATCTTTTATTGGC+AGG - chr7_2:63359592-63359611 Msa1068390:intron 25.0%
! AGTCAATTGAAGAATAAACT+TGG - chr7_2:63359955-63359974 Msa1068390:intron 25.0%
! AAAGAAATTGCAAGAATATG+AGG + chr7_2:63360061-63360080 None:intergenic 25.0%
! ACTATAGCAAATAAATTGCT+TGG - chr7_2:63360194-63360213 Msa1068390:intron 25.0%
! AGTTATCAATTATATCCAGA+TGG + chr7_2:63360586-63360605 None:intergenic 25.0%
!! GGATATAATTGATAACTGTT+TGG - chr7_2:63360589-63360608 Msa1068390:intron 25.0%
!! TTTCATATCTTTTCCTAGAA+GGG + chr7_2:63360625-63360644 None:intergenic 25.0%
!! TTTTCATATCTTTTCCTAGA+AGG + chr7_2:63360626-63360645 None:intergenic 25.0%
! TTCTGATTTAGTCAAATTCT+AGG + chr7_2:63360663-63360682 None:intergenic 25.0%
! AGAATTTGACTAAATCAGAA+AGG - chr7_2:63360663-63360682 Msa1068390:intron 25.0%
! GAATTTGACTAAATCAGAAA+GGG - chr7_2:63360664-63360683 Msa1068390:intron 25.0%
! ATGAAGAAATACAATATTGC+TGG + chr7_2:63360722-63360741 None:intergenic 25.0%
! TATATTTCAAAATGTTCTGG+TGG + chr7_2:63360763-63360782 None:intergenic 25.0%
! TTTATATTTATCACTTTGCC+AGG + chr7_2:63360821-63360840 None:intergenic 25.0%
!!! GCGTTTCTGAATTTTAATAT+TGG - chr7_2:63360894-63360913 Msa1068390:CDS 25.0%
!!! TGAATTTTAATATTGGTGAG+CGG - chr7_2:63360901-63360920 Msa1068390:CDS 25.0%
! AGAAATATTGTATTGGGAAA+TGG + chr7_2:63361163-63361182 None:intergenic 25.0%
! CATTCTGCAATTATAAAAGT+TGG + chr7_2:63361428-63361447 None:intergenic 25.0%
!!! TCTCATTCTACTACTTTTTA+TGG - chr7_2:63361560-63361579 Msa1068390:intron 25.0%
!!! CTCATTCTACTACTTTTTAT+GGG - chr7_2:63361561-63361580 Msa1068390:intron 25.0%
! AATATCCTCTTTGCATTATA+TGG - chr7_2:63361592-63361611 Msa1068390:intron 25.0%
!! ATTTAAAGCTCATCTCATTA+AGG + chr7_2:63361907-63361926 None:intergenic 25.0%
!! CTTCTCAATAGAAACATTTT+AGG - chr7_2:63362156-63362175 Msa1068390:intron 25.0%
! CAAGACATTCAATCAAATTA+TGG + chr7_2:63362679-63362698 None:intergenic 25.0%
! GAAGAATTGGAAAAATAAAC+AGG + chr7_2:63362777-63362796 None:intergenic 25.0%
!!! GAAAAATTATTTTTGGACCA+AGG - chr7_2:63363104-63363123 Msa1068390:intron 25.0%
!! ATTGGAAAGCTTTTTGTAAA+TGG + chr7_2:63363233-63363252 None:intergenic 25.0%
! AGGAAAAACAAGAATTTCAT+TGG + chr7_2:63363659-63363678 None:intergenic 25.0%
! NNNAGAATATAAGCACTCTA+GGG + chr7_2:63363778-63363797 None:intergenic 25.0%
! NNNNAGAATATAAGCACTCT+AGG + chr7_2:63363779-63363798 None:intergenic 25.0%
! TTGAAAAACAAATGAGACAA+AGG + chr7_2:63363927-63363946 None:intergenic 25.0%
GATTGATCAATAAAGGAGAA+AGG + chr7_2:63357033-63357052 None:intergenic 30.0%
! GAAAATCTGAAATAGCTTTG+CGG + chr7_2:63357107-63357126 None:intergenic 30.0%
GAACATGATATTGTGACATT+AGG - chr7_2:63357184-63357203 Msa1068390:intron 30.0%
AACACACCCTTAATGTATTT+GGG + chr7_2:63357334-63357353 None:intergenic 30.0%
AAACACACCCTTAATGTATT+TGG + chr7_2:63357335-63357354 None:intergenic 30.0%
! AAATACATTAAGGGTGTGTT+TGG - chr7_2:63357334-63357353 Msa1068390:intron 30.0%
!! AACATATGATTTCTGAAGCA+TGG - chr7_2:63357600-63357619 Msa1068390:intron 30.0%
! TCCTTTTCTCAAATAACTAC+CGG + chr7_2:63357648-63357667 None:intergenic 30.0%
TGAAAAGATGTTATGGACTT+TGG - chr7_2:63357774-63357793 Msa1068390:CDS 30.0%
TGGTTATCTCAAATGGAAAA+CGG - chr7_2:63357798-63357817 Msa1068390:CDS 30.0%
CATTCCATGTAATTGAACAT+TGG - chr7_2:63357985-63358004 Msa1068390:intron 30.0%
!!! TAACAAGCAACTTGTTTTAC+GGG + chr7_2:63358250-63358269 None:intergenic 30.0%
! TTTTCTCAACATCAAGAAAC+TGG + chr7_2:63358339-63358358 None:intergenic 30.0%
ATAGTATCTGCGTCTTTATT+GGG + chr7_2:63358378-63358397 None:intergenic 30.0%
! TACAACATATTTTCAGTTGC+AGG - chr7_2:63358417-63358436 Msa1068390:intron 30.0%
ATACTGATGCAAAATCTTTG+GGG + chr7_2:63358570-63358589 None:intergenic 30.0%
GATACTGATGCAAAATCTTT+GGG + chr7_2:63358571-63358590 None:intergenic 30.0%
AGATACTGATGCAAAATCTT+TGG + chr7_2:63358572-63358591 None:intergenic 30.0%
! AAGATTTTGCATCAGTATCT+TGG - chr7_2:63358572-63358591 Msa1068390:intron 30.0%
TAAAGAGAGTAAGATTGTGA+AGG + chr7_2:63358687-63358706 None:intergenic 30.0%
TAACTTAAATTAGTGAGTGG+TGG - chr7_2:63359017-63359036 Msa1068390:intron 30.0%
!!! TTTGTTTTGTATGTTTCCGA+TGG - chr7_2:63359143-63359162 Msa1068390:intron 30.0%
ATATGCACAGCATTTATAGA+TGG + chr7_2:63359206-63359225 None:intergenic 30.0%
TTTGTATCTATGGGTAAAAG+AGG + chr7_2:63359376-63359395 None:intergenic 30.0%
ATGGAGACTATTAGAAAACA+AGG + chr7_2:63359427-63359446 None:intergenic 30.0%
AAATTGGAACAACTGGTAAT+TGG + chr7_2:63359499-63359518 None:intergenic 30.0%
TTAATGAGGCTATAGCAAAA+AGG + chr7_2:63359527-63359546 None:intergenic 30.0%
!!! GTTTTTTGTCAAGAAACTCA+TGG - chr7_2:63359758-63359777 Msa1068390:intron 30.0%
AACTCATGGTTAATACAATC+TGG - chr7_2:63359772-63359791 Msa1068390:intron 30.0%
AGTATGATGCTTTATATGGA+AGG - chr7_2:63360014-63360033 Msa1068390:intron 30.0%
GTATGATGCTTTATATGGAA+GGG - chr7_2:63360015-63360034 Msa1068390:intron 30.0%
TATGATGCTTTATATGGAAG+GGG - chr7_2:63360016-63360035 Msa1068390:intron 30.0%
AATTAGATCTGTAGCATTTG+CGG - chr7_2:63360291-63360310 Msa1068390:intron 30.0%
! TTCATATCTTTTCCTAGAAG+GGG + chr7_2:63360624-63360643 None:intergenic 30.0%
TGATTTAGTCAAATTCTAGG+AGG + chr7_2:63360660-63360679 None:intergenic 30.0%
!!! ATCATTTTTTTATCACCTCC+TGG - chr7_2:63360800-63360819 Msa1068390:intron 30.0%
TATGACTGTAATATGTGCAA+AGG + chr7_2:63360936-63360955 None:intergenic 30.0%
ATTTAAGAAATGGAAATGGC+AGG - chr7_2:63360964-63360983 Msa1068390:intron 30.0%
TTAGGCAAACTTACTTCATT+TGG + chr7_2:63361092-63361111 None:intergenic 30.0%
AGAATGTGTTCTGATTTACT+TGG - chr7_2:63361442-63361461 Msa1068390:intron 30.0%
!!! ACTGTTTTTTCTTTATGAGC+AGG - chr7_2:63361520-63361539 Msa1068390:intron 30.0%
AGTAGAATGAGAAACTATGA+AGG + chr7_2:63361552-63361571 None:intergenic 30.0%
CAATTACAGAGAGAGTAAAA+AGG + chr7_2:63361818-63361837 None:intergenic 30.0%
TTTGCACAAATATTCTTCAG+CGG + chr7_2:63361951-63361970 None:intergenic 30.0%
CTGAAGAATATTTGTGCAAA+GGG - chr7_2:63361951-63361970 Msa1068390:intron 30.0%
CTGAAAACTCCAAAAATATG+TGG + chr7_2:63362110-63362129 None:intergenic 30.0%
TGGAAGTAACCAAAAAGATT+GGG + chr7_2:63362133-63362152 None:intergenic 30.0%
GAGAAAACAGTTTCTGATAT+TGG - chr7_2:63362211-63362230 Msa1068390:intron 30.0%
! ATGCAAAACAAACTTTTGTC+TGG - chr7_2:63362452-63362471 Msa1068390:CDS 30.0%
GATTTGAAAACACATACCAA+AGG + chr7_2:63362595-63362614 None:intergenic 30.0%
! ATTTTTCCAATTCTTCCTTG+CGG - chr7_2:63362781-63362800 Msa1068390:intron 30.0%
ATATGCTCCATGACTTATAT+TGG - chr7_2:63362899-63362918 Msa1068390:intron 30.0%
GACAATACCAATATAAGTCA+TGG + chr7_2:63362909-63362928 None:intergenic 30.0%
! TTTTCCTTTGCATGTAAAGT+TGG + chr7_2:63363089-63363108 None:intergenic 30.0%
!!! AATTATTTTTGGACCAAGGA+TGG - chr7_2:63363108-63363127 Msa1068390:intron 30.0%
TTTGCTAGAAAAGAAGTCTT+TGG - chr7_2:63363149-63363168 Msa1068390:intron 30.0%
TTTGGTATTTATCGTGTCTT+TGG - chr7_2:63363174-63363193 Msa1068390:intron 30.0%
TTTGGTATATGATTCGTCTT+TGG - chr7_2:63363192-63363211 Msa1068390:intron 30.0%
ATGTTCAAAGCACAAGTAAT+TGG - chr7_2:63363281-63363300 Msa1068390:intron 30.0%
AAGCACAAGTAATTGGATAA+AGG - chr7_2:63363288-63363307 Msa1068390:intron 30.0%
TAATTGGATAAAGGATAGAG+TGG - chr7_2:63363297-63363316 Msa1068390:intron 30.0%
CACATAAGCATATATCATAC+AGG + chr7_2:63363679-63363698 None:intergenic 30.0%
!!! CGAACGTGATTCTCTTTTTT+AGG + chr7_2:63356886-63356905 None:intergenic 35.0%
GTTTCTTCGTTATTCAACCA+TGG - chr7_2:63356905-63356924 Msa1068390:intron 35.0%
!!! TCACTGAAATTTTTGGCCAA+TGG - chr7_2:63357238-63357257 Msa1068390:intron 35.0%
TCGAAACCCCAAATACATTA+AGG - chr7_2:63357324-63357343 Msa1068390:intron 35.0%
CGAAACCCCAAATACATTAA+GGG - chr7_2:63357325-63357344 Msa1068390:intron 35.0%
ACACACCCTTAATGTATTTG+GGG + chr7_2:63357333-63357352 None:intergenic 35.0%
TATTGTAAGGTGTGTTTGGA+TGG + chr7_2:63357578-63357597 None:intergenic 35.0%
ACCGGTAGTTATTTGAGAAA+AGG - chr7_2:63357644-63357663 Msa1068390:intron 35.0%
GGTTATCTCAAATGGAAAAC+GGG - chr7_2:63357799-63357818 Msa1068390:CDS 35.0%
AGAACTTTGGTCCATAATAG+TGG - chr7_2:63357895-63357914 Msa1068390:intron 35.0%
CCTAAATCAGTCCACTATTA+TGG + chr7_2:63357909-63357928 None:intergenic 35.0%
!! CCATAATAGTGGACTGATTT+AGG - chr7_2:63357906-63357925 Msa1068390:intron 35.0%
TATCCATCTATTCCGTGTAT+TGG - chr7_2:63357931-63357950 Msa1068390:intron 35.0%
ATGATGTTCTTCTTCCTTTC+TGG - chr7_2:63358013-63358032 Msa1068390:intron 35.0%
AGGAAAAACTACAACCAGAA+AGG + chr7_2:63358030-63358049 None:intergenic 35.0%
TTGTAGGTCATGTGTGAAAA+AGG - chr7_2:63358108-63358127 Msa1068390:intron 35.0%
TGTAGGTCATGTGTGAAAAA+GGG - chr7_2:63358109-63358128 Msa1068390:intron 35.0%
ATAATCGGAGATCTTCTTAC+AGG + chr7_2:63358175-63358194 None:intergenic 35.0%
AGATCTCCGATTATTAATCG+TGG - chr7_2:63358181-63358200 Msa1068390:intron 35.0%
! GGTAAGATTTAGCTGTCTTT+TGG - chr7_2:63358202-63358221 Msa1068390:intron 35.0%
GAAACTGGTAGAGAAATTTC+CGG + chr7_2:63358324-63358343 None:intergenic 35.0%
GATAGTATCTGCGTCTTTAT+TGG + chr7_2:63358379-63358398 None:intergenic 35.0%
GAAACTAAGTTCTCATGTCA+TGG - chr7_2:63358773-63358792 Msa1068390:intron 35.0%
GGATGTCAGATGCATTAATT+TGG - chr7_2:63358912-63358931 Msa1068390:intron 35.0%
!! AAAGCAAAAGCACCAATCAA+GGG + chr7_2:63359098-63359117 None:intergenic 35.0%
!!! ACTACTTTTTTTGGAGCCAT+CGG + chr7_2:63359162-63359181 None:intergenic 35.0%
ATGGCTCCAAAAAAAGTAGT+TGG - chr7_2:63359162-63359181 Msa1068390:intron 35.0%
!!! CCATGTCCAACTACTTTTTT+TGG + chr7_2:63359171-63359190 None:intergenic 35.0%
CCAAAAAAAGTAGTTGGACA+TGG - chr7_2:63359168-63359187 Msa1068390:intron 35.0%
! TTTGCACTTCACCAAGTTTT+TGG - chr7_2:63359236-63359255 Msa1068390:intron 35.0%
TGAACAACATTGTTATAGCC+TGG - chr7_2:63359331-63359350 Msa1068390:intron 35.0%
AATCAATCTTCTATGCTACC+AGG + chr7_2:63359352-63359371 None:intergenic 35.0%
AAAACAAGGATCCCATCATA+CGG + chr7_2:63359413-63359432 None:intergenic 35.0%
GGTTACAAAATTGGAACAAC+TGG + chr7_2:63359506-63359525 None:intergenic 35.0%
CAATACACCATAGGTTAATG+AGG + chr7_2:63359541-63359560 None:intergenic 35.0%
! AATCTTTTATTGGCAGGATG+AGG - chr7_2:63359598-63359617 Msa1068390:intron 35.0%
! ATCTTTTATTGGCAGGATGA+GGG - chr7_2:63359599-63359618 Msa1068390:intron 35.0%
!! GAAAGCACCACATTTATATG+TGG - chr7_2:63359622-63359641 Msa1068390:intron 35.0%
ACCACATTTATATGTGGAAG+TGG - chr7_2:63359628-63359647 Msa1068390:intron 35.0%
TCCACTTCCACATATAAATG+TGG + chr7_2:63359632-63359651 None:intergenic 35.0%
GTCTAATAAAGGTTGCAGAA+AGG + chr7_2:63359680-63359699 None:intergenic 35.0%
!! CTTTTTACTTGTTACCTGGA+TGG + chr7_2:63359914-63359933 None:intergenic 35.0%
CATCCAGGTAACAAGTAAAA+AGG - chr7_2:63359912-63359931 Msa1068390:intron 35.0%
GCTGAGTATGATGCTTTATA+TGG - chr7_2:63360010-63360029 Msa1068390:intron 35.0%
CTTGGATTAACTGAAAGAGT+TGG - chr7_2:63360212-63360231 Msa1068390:intron 35.0%
GTTGTTGAGATTAAACTGAG+TGG + chr7_2:63360261-63360280 None:intergenic 35.0%
ATTTGCGGATGTAACCAATA+CGG - chr7_2:63360306-63360325 Msa1068390:intron 35.0%
TCATAGTGAAAAGACCGTAT+TGG + chr7_2:63360323-63360342 None:intergenic 35.0%
CATCATAACCATTACTGAGA+TGG - chr7_2:63360503-63360522 Msa1068390:intron 35.0%
! ATGGATCCAAGGTATGTTTT+GGG - chr7_2:63360522-63360541 Msa1068390:intron 35.0%
TTGAATCCCAAAACATACCT+TGG + chr7_2:63360531-63360550 None:intergenic 35.0%
!! TTGTTAGTTCTGTTACCATC+TGG - chr7_2:63360568-63360587 Msa1068390:intron 35.0%
ATATTTATCACTTTGCCAGG+AGG + chr7_2:63360818-63360837 None:intergenic 35.0%
TCTTCTAAACTAATGCCCTA+AGG - chr7_2:63361190-63361209 Msa1068390:intron 35.0%
CTTCTAAACTAATGCCCTAA+GGG - chr7_2:63361191-63361210 Msa1068390:intron 35.0%
TACACATGCATTTATGATCC+AGG - chr7_2:63361363-63361382 Msa1068390:intron 35.0%
CTGCAATTATAAAAGTTGGC+AGG + chr7_2:63361424-63361443 None:intergenic 35.0%
! ACAGTGCTGTTGAAAATGTT+CGG + chr7_2:63361505-63361524 None:intergenic 35.0%
AAGTGCCATATAATGCAAAG+AGG + chr7_2:63361600-63361619 None:intergenic 35.0%
GCAGATGATCAGAAATTTAG+AGG - chr7_2:63361655-63361674 Msa1068390:intron 35.0%
TTGTATCTTGTTCTCTACTG+TGG - chr7_2:63361694-63361713 Msa1068390:intron 35.0%
! GATTGATTTCGGATTACCAT+TGG - chr7_2:63361733-63361752 Msa1068390:intron 35.0%
GCTGAAGAATATTTGTGCAA+AGG - chr7_2:63361950-63361969 Msa1068390:intron 35.0%
AAGTTATCATCCAAAACCAC+AGG + chr7_2:63362066-63362085 None:intergenic 35.0%
ACTCCAAAAATATGTGGAGA+TGG + chr7_2:63362104-63362123 None:intergenic 35.0%
! AGTTTTCAGCCCAATCTTTT+TGG - chr7_2:63362121-63362140 Msa1068390:intron 35.0%
GTGGAAGTAACCAAAAAGAT+TGG + chr7_2:63362134-63362153 None:intergenic 35.0%
! ATGTTTCTATTGAGAAGTCG+TGG + chr7_2:63362153-63362172 None:intergenic 35.0%
TTTGCATCAGAAACTCTCAT+TGG + chr7_2:63362255-63362274 None:intergenic 35.0%
TGTGTATATTCTATACCGAG+TGG + chr7_2:63362409-63362428 None:intergenic 35.0%
AATGTGAACTATTAGTGAGG+AGG + chr7_2:63362655-63362674 None:intergenic 35.0%
! ATTCTATCATCTTCCCCTTT+TGG - chr7_2:63362723-63362742 Msa1068390:CDS 35.0%
! TTCTATCATCTTCCCCTTTT+GGG - chr7_2:63362724-63362743 Msa1068390:CDS 35.0%
ATGAATGTAAGTCCCAAAAG+GGG + chr7_2:63362739-63362758 None:intergenic 35.0%
CATGAATGTAAGTCCCAAAA+GGG + chr7_2:63362740-63362759 None:intergenic 35.0%
ACATGAATGTAAGTCCCAAA+AGG + chr7_2:63362741-63362760 None:intergenic 35.0%
TATAAGTCATGGAGCATATG+TGG + chr7_2:63362898-63362917 None:intergenic 35.0%
TGTTAATTATGCCTGAGTGA+CGG - chr7_2:63362930-63362949 Msa1068390:intron 35.0%
GATGTGTATAAACCGTAACA+TGG - chr7_2:63363003-63363022 Msa1068390:intron 35.0%
TACACCAACTTTACATGCAA+AGG - chr7_2:63363082-63363101 Msa1068390:intron 35.0%
!! GAAAAGAAGTCTTTGGTGTT+TGG - chr7_2:63363156-63363175 Msa1068390:intron 35.0%
GATGACATCTTTATCGTCAT+TGG + chr7_2:63363251-63363270 None:intergenic 35.0%
TGACGATAAAGATGTCATCT+AGG - chr7_2:63363252-63363271 Msa1068390:intron 35.0%
ATCTCACAACTTCTTCAACA+TGG - chr7_2:63363585-63363604 Msa1068390:intron 35.0%
! TGTATACCTGATTTTCCTTG+CGG - chr7_2:63363739-63363758 Msa1068390:intron 35.0%
TCTTCGTTATTCAACCATGG+CGG - chr7_2:63356908-63356927 Msa1068390:intron 40.0%
!!! GAAATTTTTGGCCAATGGAC+TGG - chr7_2:63357243-63357262 Msa1068390:intron 40.0%
! TTAAGGGTGTGTTTGGATTG+AGG - chr7_2:63357341-63357360 Msa1068390:intron 40.0%
! TAAGGGTGTGTTTGGATTGA+GGG - chr7_2:63357342-63357361 Msa1068390:intron 40.0%
TGTGTTTGGATTGAGGGTTT+AGG - chr7_2:63357348-63357367 Msa1068390:intron 40.0%
TTTGGATTGAGGGTTTAGGA+CGG - chr7_2:63357352-63357371 Msa1068390:intron 40.0%
TCGTGTCAAATGTCAGACAT+TGG - chr7_2:63357698-63357717 Msa1068390:intron 40.0%
ACGTGTTCGATCAGAAATGT+CGG - chr7_2:63357723-63357742 Msa1068390:intron 40.0%
AAGATGTTATGGACTTTGGC+TGG - chr7_2:63357778-63357797 Msa1068390:CDS 40.0%
! CTTTGGCTGGTTATCTCAAA+TGG - chr7_2:63357791-63357810 Msa1068390:CDS 40.0%
CTTCCAATACACGGAATAGA+TGG + chr7_2:63357937-63357956 None:intergenic 40.0%
CATCTATTCCGTGTATTGGA+AGG - chr7_2:63357935-63357954 Msa1068390:intron 40.0%
GTGATAGACCTTCCAATACA+CGG + chr7_2:63357946-63357965 None:intergenic 40.0%
! GAAATTTGCTTCCCATGAAC+TGG - chr7_2:63358085-63358104 Msa1068390:intron 40.0%
ATGACCTACAACCAGTTCAT+GGG + chr7_2:63358099-63358118 None:intergenic 40.0%
GTAGGTCATGTGTGAAAAAG+GGG - chr7_2:63358110-63358129 Msa1068390:intron 40.0%
! ATGAAGGTTACTTTGCTCGT+TGG - chr7_2:63358290-63358309 Msa1068390:intron 40.0%
! TGAAGGTTACTTTGCTCGTT+GGG - chr7_2:63358291-63358310 Msa1068390:intron 40.0%
AAGACGCAGATACTATCACT+TGG - chr7_2:63358382-63358401 Msa1068390:intron 40.0%
AGTAACTTCTCCAAACTGTG+TGG - chr7_2:63358848-63358867 Msa1068390:intron 40.0%
GTAACTTCTCCAAACTGTGT+GGG - chr7_2:63358849-63358868 Msa1068390:intron 40.0%
!! AAGCAAAAGCACCAATCAAG+GGG + chr7_2:63359097-63359116 None:intergenic 40.0%
!! GAAAGCAAAAGCACCAATCA+AGG + chr7_2:63359099-63359118 None:intergenic 40.0%
TAAATCTGCATGCCGTATGA+TGG - chr7_2:63359398-63359417 Msa1068390:CDS 40.0%
AAATCTGCATGCCGTATGAT+GGG - chr7_2:63359399-63359418 Msa1068390:CDS 40.0%
GCTATAGCCTCATTAACCTA+TGG - chr7_2:63359531-63359550 Msa1068390:intron 40.0%
GTCACATAGCAATACACCAT+AGG + chr7_2:63359550-63359569 None:intergenic 40.0%
! TCTTTTATTGGCAGGATGAG+GGG - chr7_2:63359600-63359619 Msa1068390:intron 40.0%
! TGTGGAAGTGGACTTTAAAG+AGG - chr7_2:63359640-63359659 Msa1068390:intron 40.0%
GCTGCAGCATTGTCTAATAA+AGG + chr7_2:63359691-63359710 None:intergenic 40.0%
!! TTGTTTATGGGCTCTGAGAT+GGG - chr7_2:63359723-63359742 Msa1068390:intron 40.0%
!! CTGCCTTTTTACTTGTTACC+TGG + chr7_2:63359918-63359937 None:intergenic 40.0%
TGAAACAGCCTCCATTTCAA+GGG - chr7_2:63359978-63359997 Msa1068390:intron 40.0%
! TTTTCTTCTGTGCTAGCACA+TGG - chr7_2:63360079-63360098 Msa1068390:intron 40.0%
TCTCATTCTATGCCAGAGAA+AGG - chr7_2:63360414-63360433 Msa1068390:CDS 40.0%
CTGATAACTTCTCCTTTCTC+TGG + chr7_2:63360429-63360448 None:intergenic 40.0%
TTATATCACGCAAGTCTGCA+GGG + chr7_2:63360470-63360489 None:intergenic 40.0%
TTTATATCACGCAAGTCTGC+AGG + chr7_2:63360471-63360490 None:intergenic 40.0%
! GATGGATCCAAGGTATGTTT+TGG - chr7_2:63360521-63360540 Msa1068390:intron 40.0%
ATGGCAGGAAGAAACAAGTT+TGG - chr7_2:63360979-63360998 Msa1068390:intron 40.0%
TGGCAGGAAGAAACAAGTTT+GGG - chr7_2:63360980-63360999 Msa1068390:intron 40.0%
!! AATGCTAAAGAGTGCCCTTA+GGG + chr7_2:63361208-63361227 None:intergenic 40.0%
!! AAATGCTAAAGAGTGCCCTT+AGG + chr7_2:63361209-63361228 None:intergenic 40.0%
!! TGCTAAAGGCACTCAAACAT+TGG - chr7_2:63361271-63361290 Msa1068390:intron 40.0%
!! TAAAGGCACTCAAACATTGG+AGG - chr7_2:63361274-63361293 Msa1068390:intron 40.0%
!! AAAGGCACTCAAACATTGGA+GGG - chr7_2:63361275-63361294 Msa1068390:intron 40.0%
ACAACTTCGTGACTTGAATC+TGG + chr7_2:63361470-63361489 None:intergenic 40.0%
GATTCAAGTCACGAAGTTGT+TGG - chr7_2:63361470-63361489 Msa1068390:intron 40.0%
! AAGTCACGAAGTTGTTGGTT+GGG - chr7_2:63361475-63361494 Msa1068390:intron 40.0%
! ATCCATCCAGATGATGCTTT+TGG - chr7_2:63361629-63361648 Msa1068390:intron 40.0%
TGATTTCGGATTACCATTGG+AGG - chr7_2:63361736-63361755 Msa1068390:intron 40.0%
!! GAGAACGAAGATCCACTTTT+AGG + chr7_2:63361770-63361789 None:intergenic 40.0%
ATGATTTCGTACCTCAAGTG+AGG - chr7_2:63361974-63361993 Msa1068390:intron 40.0%
!! GATTAGTCTCACCCATAGTT+GGG - chr7_2:63361996-63362015 Msa1068390:intron 40.0%
TGTCATGAATGCCCAACTAT+GGG + chr7_2:63362010-63362029 None:intergenic 40.0%
ATGTCATGAATGCCCAACTA+TGG + chr7_2:63362011-63362030 None:intergenic 40.0%
! TAGATTAGTTGTCATGCCTG+TGG - chr7_2:63362047-63362066 Msa1068390:intron 40.0%
! TCGCCATCTCCACATATTTT+TGG - chr7_2:63362098-63362117 Msa1068390:intron 40.0%
ATACAAGCATGTCTAAGCCT+AGG - chr7_2:63362285-63362304 Msa1068390:intron 40.0%
CTTGTACATACCTACTACCT+AGG + chr7_2:63362305-63362324 None:intergenic 40.0%
!! TTGTAGCTAGACTAGCTTTC+TGG + chr7_2:63362369-63362388 None:intergenic 40.0%
GTGAATGAAACTCATCCACT+CGG - chr7_2:63362391-63362410 Msa1068390:intron 40.0%
CATGCATGAACATAGACTAG+TGG + chr7_2:63362558-63362577 None:intergenic 40.0%
TGACTTCTCTGTTCATCCTT+TGG - chr7_2:63362576-63362595 Msa1068390:intron 40.0%
GGGAATGTGAACTATTAGTG+AGG + chr7_2:63362658-63362677 None:intergenic 40.0%
GACTTACATTCATGTGCTCT+TGG - chr7_2:63362746-63362765 Msa1068390:intron 40.0%
!!! TTTGTTTTGCATCAGTGTCG+CGG - chr7_2:63363035-63363054 Msa1068390:intron 40.0%
GCAAGTGTTAACACTCAACT+TGG + chr7_2:63363623-63363642 None:intergenic 40.0%
!!! GATCGTGATGTTTTTTCGCA+AGG - chr7_2:63363705-63363724 Msa1068390:intron 40.0%
! TATAAGCACTCTAGGGGAAT+GGG + chr7_2:63363771-63363790 None:intergenic 40.0%
! ATATAAGCACTCTAGGGGAA+TGG + chr7_2:63363772-63363791 None:intergenic 40.0%
ACTGTTGTCGATGCGTGAAT+CGG + chr7_2:63356943-63356962 None:intergenic 45.0%
CATCGACAACAGTAACACTG+CGG - chr7_2:63356950-63356969 Msa1068390:intron 45.0%
TCTCCATTTCTCCAGTCCAT+TGG + chr7_2:63357257-63357276 None:intergenic 45.0%
! TTGGATTGAGGGTTTAGGAC+GGG - chr7_2:63357353-63357372 Msa1068390:intron 45.0%
TTTGGATGGAGGGTTTAGGA+GGG + chr7_2:63357564-63357583 None:intergenic 45.0%
TGTGTTTGGATGGAGGGTTT+AGG + chr7_2:63357568-63357587 None:intergenic 45.0%
GTAAGGTGTGTTTGGATGGA+GGG + chr7_2:63357574-63357593 None:intergenic 45.0%
TGTAAGGTGTGTTTGGATGG+AGG + chr7_2:63357575-63357594 None:intergenic 45.0%
CATGACCTACAACCAGTTCA+TGG + chr7_2:63358100-63358119 None:intergenic 45.0%
CTGGTAGAGAAATTTCCGGA+GGG + chr7_2:63358320-63358339 None:intergenic 45.0%
ACTGGTAGAGAAATTTCCGG+AGG + chr7_2:63358321-63358340 None:intergenic 45.0%
CAGATACTATCACTTGGAGC+AGG - chr7_2:63358388-63358407 Msa1068390:intron 45.0%
GCACAGCATAACTCAAACTC+AGG + chr7_2:63358445-63358464 None:intergenic 45.0%
!!! CCTCTTATTTTGGAGCTGTG+CGG - chr7_2:63358511-63358530 Msa1068390:intron 45.0%
!!! CTCTTATTTTGGAGCTGTGC+GGG - chr7_2:63358512-63358531 Msa1068390:intron 45.0%
CATAAGTAGCCCACACAGTT+TGG + chr7_2:63358861-63358880 None:intergenic 45.0%
ACCAATCAAGGGGATTCACA+AGG + chr7_2:63359087-63359106 None:intergenic 45.0%
ATAGTCTCCATCCGCTTGTT+TGG - chr7_2:63359436-63359455 Msa1068390:intron 45.0%
CAGAGTCACATCCAAACAAG+CGG + chr7_2:63359450-63359469 None:intergenic 45.0%
GCTTGTTTGGATGTGACTCT+GGG - chr7_2:63359449-63359468 Msa1068390:intron 45.0%
!! AAGGTTGCAGAAAGGTACTC+AGG + chr7_2:63359672-63359691 None:intergenic 45.0%
!! GTTGTTTATGGGCTCTGAGA+TGG - chr7_2:63359722-63359741 Msa1068390:intron 45.0%
!! TGTTTATGGGCTCTGAGATG+GGG - chr7_2:63359724-63359743 Msa1068390:intron 45.0%
TACTATCATGCTTGCCATCC+AGG - chr7_2:63359897-63359916 Msa1068390:intron 45.0%
GTGAAACAGCCTCCATTTCA+AGG - chr7_2:63359977-63359996 Msa1068390:intron 45.0%
GAAACAGCCTCCATTTCAAG+GGG - chr7_2:63359979-63359998 Msa1068390:intron 45.0%
CTACTTACCCCTTGAAATGG+AGG + chr7_2:63359989-63360008 None:intergenic 45.0%
GCACTACTTACCCCTTGAAA+TGG + chr7_2:63359992-63360011 None:intergenic 45.0%
CCTTGGATCCATCTCAGTAA+TGG + chr7_2:63360514-63360533 None:intergenic 45.0%
CCATTACTGAGATGGATCCA+AGG - chr7_2:63360511-63360530 Msa1068390:intron 45.0%
CAAGTCACGAAGTTGTTGGT+TGG - chr7_2:63361474-63361493 Msa1068390:intron 45.0%
TGCTGTTGAAAATGTTCGGC+AGG + chr7_2:63361501-63361520 None:intergenic 45.0%
!! GACCAAAAGCATCATCTGGA+TGG + chr7_2:63361634-63361653 None:intergenic 45.0%
!! TGCTGACCAAAAGCATCATC+TGG + chr7_2:63361638-63361657 None:intergenic 45.0%
TTAGGATCAGACACCTCCAA+TGG + chr7_2:63361752-63361771 None:intergenic 45.0%
! GAGGTGTCTGATCCTAAAAG+TGG - chr7_2:63361755-63361774 Msa1068390:intron 45.0%
GTGAGACTAATCCTCACTTG+AGG + chr7_2:63361988-63362007 None:intergenic 45.0%
!! GGATTAGTCTCACCCATAGT+TGG - chr7_2:63361995-63362014 Msa1068390:intron 45.0%
! AGTTGTCATGCCTGTGGTTT+TGG - chr7_2:63362053-63362072 Msa1068390:intron 45.0%
CATGTCTAAGCCTAGGTAGT+AGG - chr7_2:63362292-63362311 Msa1068390:intron 45.0%
! ACGTCTCTGTTTTCCTGCTT+GGG - chr7_2:63362624-63362643 Msa1068390:intron 45.0%
GTGAACTATTAGTGAGGAGG+AGG + chr7_2:63362652-63362671 None:intergenic 45.0%
TGAAGTCCGCAAGGAAGAAT+TGG + chr7_2:63362790-63362809 None:intergenic 45.0%
TGATCAGAATGAAGTCCGCA+AGG + chr7_2:63362799-63362818 None:intergenic 45.0%
TGCGGACTTCATTCTGATCA+AGG - chr7_2:63362799-63362818 Msa1068390:intron 45.0%
GGACTTCATTCTGATCAAGG+AGG - chr7_2:63362802-63362821 Msa1068390:intron 45.0%
GTAGCATAGATACCCAACAG+AGG + chr7_2:63363065-63363084 None:intergenic 45.0%
!! ATTTTTGGACCAAGGATGGC+AGG - chr7_2:63363112-63363131 Msa1068390:intron 45.0%
CATGAAATACCTGCCATCCT+TGG + chr7_2:63363124-63363143 None:intergenic 45.0%
!!! TATATTTTATATTTAAGAAA+TGG - chr7_2:63360954-63360973 Msa1068390:intron 5.0%
!!! ATAATTATTATTTTTTTGAA+TGG + chr7_2:63363330-63363349 None:intergenic 5.0%
!! TTCAACCATGGCGGATACAG+TGG - chr7_2:63356917-63356936 Msa1068390:intron 50.0%
GCGAGCGTACAATTTACTGG+CGG + chr7_2:63357003-63357022 None:intergenic 50.0%
CGTGCGAGCGTACAATTTAC+TGG + chr7_2:63357006-63357025 None:intergenic 50.0%
!! TGGCCAATGGACTGGAGAAA+TGG - chr7_2:63357251-63357270 Msa1068390:intron 50.0%
! TGGACTGGAGAAATGGAGAC+AGG - chr7_2:63357258-63357277 Msa1068390:intron 50.0%
! TTGAGGGTTTAGGACGGGAA+TGG - chr7_2:63357358-63357377 Msa1068390:intron 50.0%
TTGGATGGAGGGTTTAGGAG+GGG + chr7_2:63357563-63357582 None:intergenic 50.0%
GTTTGGATGGAGGGTTTAGG+AGG + chr7_2:63357565-63357584 None:intergenic 50.0%
CAACACTGACACATCGACAC+CGG - chr7_2:63357626-63357645 Msa1068390:intron 50.0%
GCTTCCCATGAACTGGTTGT+AGG - chr7_2:63358092-63358111 Msa1068390:intron 50.0%
CCGCACAGCTCCAAAATAAG+AGG + chr7_2:63358514-63358533 None:intergenic 50.0%
TCAAGGGGATTCACAAGGCA+TGG + chr7_2:63359082-63359101 None:intergenic 50.0%
GCCTTGTGAATCCCCTTGAT+TGG - chr7_2:63359083-63359102 Msa1068390:intron 50.0%
GTCACATCCAAACAAGCGGA+TGG + chr7_2:63359446-63359465 None:intergenic 50.0%
CGCTTGTTTGGATGTGACTC+TGG - chr7_2:63359448-63359467 Msa1068390:intron 50.0%
TGGATGTATCAGCCCCTTCT+AGG - chr7_2:63360609-63360628 Msa1068390:intron 50.0%
CAGTGGCTGGCAACAAAAGT+GGG + chr7_2:63362500-63362519 None:intergenic 50.0%
TCAGTGGCTGGCAACAAAAG+TGG + chr7_2:63362501-63362520 None:intergenic 50.0%
! CACGTCTCTGTTTTCCTGCT+TGG - chr7_2:63362623-63362642 Msa1068390:intron 50.0%
ACGTAGAATCACCGTCACTC+AGG + chr7_2:63362944-63362963 None:intergenic 50.0%
TCTAGGCCGCAAGGAAAATC+AGG + chr7_2:63363748-63363767 None:intergenic 50.0%
CGACAACAGTAACACTGCGG+CGG - chr7_2:63356953-63356972 Msa1068390:intron 55.0%
! AGGGTTTAGGACGGGAATGG+AGG - chr7_2:63357361-63357380 Msa1068390:intron 55.0%
! GGGTTTAGGACGGGAATGGA+GGG - chr7_2:63357362-63357381 Msa1068390:intron 55.0%
! GGTTTAGGACGGGAATGGAG+GGG - chr7_2:63357363-63357382 Msa1068390:intron 55.0%
TGGAGGGTTTAGGAGGGGAA+GGG + chr7_2:63357558-63357577 None:intergenic 55.0%
ATGGAGGGTTTAGGAGGGGA+AGG + chr7_2:63357559-63357578 None:intergenic 55.0%
GTGCGGGTCAAGTGAAGGTT+TGG - chr7_2:63358528-63358547 Msa1068390:intron 55.0%
!! TTATGGGCTCTGAGATGGGG+TGG - chr7_2:63359727-63359746 Msa1068390:intron 55.0%
AAGACCAGAGTCCTGGACAC+GGG + chr7_2:63362535-63362554 None:intergenic 55.0%
GAAGACCAGAGTCCTGGACA+CGG + chr7_2:63362536-63362555 None:intergenic 55.0%
CTAGTGGAAGACCAGAGTCC+TGG + chr7_2:63362542-63362561 None:intergenic 55.0%
TGTCGCGGATGTCCTCTGTT+GGG - chr7_2:63363050-63363069 Msa1068390:intron 55.0%
! CACTCTAGGGGAATGGGTCT+AGG + chr7_2:63363765-63363784 None:intergenic 55.0%
ATCGGCCACTGTATCCGCCA+TGG + chr7_2:63356925-63356944 None:intergenic 60.0%
TTAGGACGGGAATGGAGGGG+AGG - chr7_2:63357366-63357385 Msa1068390:intron 60.0%
TAGGACGGGAATGGAGGGGA+GGG - chr7_2:63357367-63357386 Msa1068390:intron 60.0%
GGTTTAGGAGGGGAAGGGAG+GGG + chr7_2:63357553-63357572 None:intergenic 60.0%
GGGTTTAGGAGGGGAAGGGA+GGG + chr7_2:63357554-63357573 None:intergenic 60.0%
AGGGTTTAGGAGGGGAAGGG+AGG + chr7_2:63357555-63357574 None:intergenic 60.0%
GAGCTGTGCGGGTCAAGTGA+AGG - chr7_2:63358523-63358542 Msa1068390:intron 60.0%
TGAGGAGGAGGAACCCAAGC+AGG + chr7_2:63362640-63362659 None:intergenic 60.0%
GTGTCGCGGATGTCCTCTGT+TGG - chr7_2:63363049-63363068 Msa1068390:intron 60.0%
!! ACTGGCGGAAGCGTCGTCGT+TGG + chr7_2:63356988-63357007 None:intergenic 65.0%
TTGCTCGTTGGGCTGCCCTC+CGG - chr7_2:63358302-63358321 Msa1068390:intron 65.0%
GTGGGAAGTGGGTCAGTGGC+TGG + chr7_2:63362513-63362532 None:intergenic 65.0%
ACGGGTGGGAAGTGGGTCAG+TGG + chr7_2:63362517-63362536 None:intergenic 65.0%
CCTGGACACGGGTGGGAAGT+GGG + chr7_2:63362524-63362543 None:intergenic 65.0%
TCCTGGACACGGGTGGGAAG+TGG + chr7_2:63362525-63362544 None:intergenic 65.0%
CCAGAGTCCTGGACACGGGT+GGG + chr7_2:63362531-63362550 None:intergenic 65.0%
ACCAGAGTCCTGGACACGGG+TGG + chr7_2:63362532-63362551 None:intergenic 65.0%
GGGAATGGGTCTAGGCCGCA+AGG + chr7_2:63363757-63363776 None:intergenic 65.0%
!! GGCGGAAGCGTCGTCGTTGG+TGG + chr7_2:63356985-63357004 None:intergenic 70.0%
CCCACTTCCCACCCGTGTCC+AGG - chr7_2:63362521-63362540 Msa1068390:CDS 70.0%
CCCACCCGTGTCCAGGACTC+TGG - chr7_2:63362528-63362547 Msa1068390:CDS 70.0%
Chromosome Type Strat End Strand Name
chr7_2 gene 63356869 63364006 63356869 ID=Msa1068390;Name=Msa1068390
chr7_2 mRNA 63356869 63364006 63356869 ID=Msa1068390-mRNA-1;Parent=Msa1068390;Name=Msa1068390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=55|0.77|0.8|0.9|0.88|0.9|10|0|275
chr7_2 exon 63356869 63356889 63356869 ID=Msa1068390-mRNA-1:exon:13116;Parent=Msa1068390-mRNA-1
chr7_2 exon 63357742 63357825 63357742 ID=Msa1068390-mRNA-1:exon:13115;Parent=Msa1068390-mRNA-1
chr7_2 exon 63359199 63359246 63359199 ID=Msa1068390-mRNA-1:exon:13114;Parent=Msa1068390-mRNA-1
chr7_2 exon 63359334 63359454 63359334 ID=Msa1068390-mRNA-1:exon:13113;Parent=Msa1068390-mRNA-1
chr7_2 exon 63360343 63360445 63360343 ID=Msa1068390-mRNA-1:exon:13112;Parent=Msa1068390-mRNA-1
chr7_2 exon 63360875 63360956 63360875 ID=Msa1068390-mRNA-1:exon:13111;Parent=Msa1068390-mRNA-1
chr7_2 exon 63361214 63361261 63361214 ID=Msa1068390-mRNA-1:exon:13110;Parent=Msa1068390-mRNA-1
chr7_2 exon 63362437 63362579 63362437 ID=Msa1068390-mRNA-1:exon:13109;Parent=Msa1068390-mRNA-1
chr7_2 exon 63362673 63362761 63362673 ID=Msa1068390-mRNA-1:exon:13108;Parent=Msa1068390-mRNA-1
chr7_2 exon 63363863 63364006 63363863 ID=Msa1068390-mRNA-1:exon:13107;Parent=Msa1068390-mRNA-1
chr7_2 five_prime_UTR 63363952 63364006 63363952 ID=Msa1068390-mRNA-1:five_prime_utr;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63363863 63363951 63363863 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63362673 63362761 63362673 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63362437 63362579 63362437 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63361214 63361261 63361214 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63360875 63360956 63360875 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63360343 63360445 63360343 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63359334 63359454 63359334 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63359199 63359246 63359199 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63357742 63357825 63357742 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
chr7_2 CDS 63356869 63356889 63356869 ID=Msa1068390-mRNA-1:cds;Parent=Msa1068390-mRNA-1
Gene Sequence

>Msa1068390

ATGGCGGATACAGTGGCCGATTCACGCATCGACAACAGTAACACTGCGGCGGTACAAGCCACCAACGACGACGCTTCCGCCAGTAAATTGTCATGTGTGAAAAAGGGGTACATGAAAGATGATTACATTCATTTATTTGTGAGAAGGCCTGTAAGAAGATCTCCGATTATTAATCGTGGTTACTTTGCTCGTTGGGCTGCCCTCCGGAAATTTCTCTACCAGTTTCTTGATGTTGAGAAAAAGAACAATGAAAATGGCCCAATAAAGACGCAGATACTATCACTTGGAGCAGGCTTTGATACAACATATTTTCAGTTGCAGGATGAGGGGAAAGCACCACATTTATATGTGGAAGTGGACTTTAAAGAGGTAACAAGTAAAAAGGCAGCACTGATCGAGACTTGCAGTCAATTGAAGAATAAACTTGGTGAAACAGCCTCCATTTCAAGGGAGAAAGGAGAAGTTATCAGTGCTCATTATAAACTAGTCCCTGCAGACTTGCGTGATATAAAACAATTAAATGACATCATAACCATTACTGAGATGGATCCAAGCCTGCCAACTTTTATAATTGCAGAATGTGTTCTGATTTACTTGGATCCAGATTCAAGTCACGAAGTTGTTGGTTGGGCCTGCCGAACATTTTCAACAGCACTGTTTTTTCTTTATGAGCAGATCCATCCAGATGATGCTTTTGGTCAGCAGATGATCAGAAATTTAGAGTGTCGCGGATGTCCTCTGTTGGGTATCTATGCTACACCAACTTTACATGCAAAGGAAAAATTATTTTTGGACCAAGGATGGCAGAGAGTTTTAGACTCCAATTAA

Protein sequence

>Msa1068390

MADTVADSRIDNSNTAAVQATNDDASASKLSCVKKGYMKDDYIHLFVRRPVRRSPIINRGYFARWAALRKFLYQFLDVEKKNNENGPIKTQILSLGAGFDTTYFQLQDEGKAPHLYVEVDFKEVTSKKAALIETCSQLKNKLGETASISREKGEVISAHYKLVPADLRDIKQLNDIITITEMDPSLPTFIIAECVLIYLDPDSSHEVVGWACRTFSTALFFLYEQIHPDDAFGQQMIRNLECRGCPLLGIYATPTLHAKEKLFLDQGWQRVLDSN*