AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0126770


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126770 MtrunA17_Chr1g0190001 99.571 699 3 0 1 699 1 699 0.0 1434
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0126770 AT1G71270.1 83.236 686 114 1 14 699 23 707 0.0 1198
Msa0126770 AT1G71300.2 77.681 690 147 2 16 699 13 701 0.0 1122
Msa0126770 AT1G71300.1 73.370 736 143 5 16 699 13 747 0.0 1103

Find 153 sgRNAs with CRISPR-Local

Find 629 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACACTTTGTTGAAGTATT+TGG 0.142382 1_3:-55866208 None:intergenic
AAAACATACATTGGATATTA+TGG 0.143109 1_3:-55872554 None:intergenic
AAACTCACTTGTACTTTAAA+AGG 0.194550 1_3:-55866229 None:intergenic
GCAACATCCTATGATTTAAT+TGG 0.226169 1_3:+55867602 Msa0126770:CDS
AAGTATTTGGATATTTGTTT+TGG 0.230134 1_3:-55866195 None:intergenic
ATTCCAGCAACTAAGATCTT+AGG 0.236093 1_3:+55872818 Msa0126770:three_prime_UTR
TACATTGGATATTATGGATT+TGG 0.243421 1_3:-55872548 None:intergenic
AGAAACACCGTTTGTAGTTT+TGG 0.244653 1_3:-55871175 None:intergenic
AACTCTGCTAAGTGGATTTC+AGG 0.248051 1_3:+55864147 Msa0126770:CDS
ATCCACTTAAACTCTGAGTT+TGG 0.250844 1_3:+55870990 Msa0126770:CDS
TATTATCACAATCATGAATT+TGG 0.261483 1_3:-55864108 None:intergenic
GCCATTGACGTGATGAGATT+TGG 0.261744 1_3:-55862363 None:intergenic
CTCATACATGATTGAAGATA+TGG 0.264600 1_3:-55872460 None:intergenic
GCAAGAGAAGTCTATGGATA+TGG 0.265601 1_3:+55864649 Msa0126770:CDS
CACAATTTAATAAATTGATT+TGG 0.280183 1_3:+55872884 Msa0126770:three_prime_UTR
GCAACAGTTATAGGTTTATC+AGG 0.284406 1_3:-55872225 None:intergenic
CGCTTTATACTTACAGGCTT+TGG 0.287857 1_3:-55872077 None:intergenic
TCCACTTCCGCAACAGTTAT+AGG 0.293677 1_3:-55872234 None:intergenic
TTAGTATAATCTCTAAGTTT+TGG 0.301178 1_3:-55863808 None:intergenic
TCCACTTAAACTCTGAGTTT+GGG 0.308316 1_3:+55870991 Msa0126770:CDS
AGTGGAGTTGGATTCAATTC+AGG 0.310032 1_3:+55863855 Msa0126770:CDS
TTGGTTTATACAGGTCCTTT+TGG 0.364770 1_3:+55869294 Msa0126770:intron
GAGCTTGCAGAAGCTGCTTA+TGG 0.365008 1_3:+55868464 Msa0126770:CDS
CCATTGACGTGATGAGATTT+GGG 0.371241 1_3:-55862362 None:intergenic
CCTTCTAGTGCATTTGATCT+AGG 0.372542 1_3:+55862648 Msa0126770:CDS
GCTGGAATGCCATGCTCAAC+AGG 0.375148 1_3:-55872803 None:intergenic
ATTGCAGCTTGAACTGAATC+TGG 0.380544 1_3:+55871093 Msa0126770:intron
TTAAATCATTAAAATGCTCT+TGG 0.392587 1_3:-55872039 None:intergenic
TGATAATATCTTGTCACATA+TGG 0.393000 1_3:+55864123 Msa0126770:CDS
CTCTGAGTTTGGGGATGGTC+AGG 0.393038 1_3:+55871001 Msa0126770:CDS
ACCTATAACTGTTGCGGAAG+TGG 0.396596 1_3:+55872233 Msa0126770:CDS
CTTCAATCATGTATGAGATT+AGG 0.397107 1_3:+55872466 Msa0126770:CDS
TCGGAGGCGGATTCCATGCT+TGG 0.397429 1_3:+55869841 Msa0126770:CDS
TTTAATAAATTGATTTGGAT+TGG 0.397531 1_3:+55872889 Msa0126770:three_prime_UTR
CCCACCAGGGATCCTCTTGA+TGG 0.398438 1_3:-55872412 None:intergenic
ATTTCAGGAAATTGATGAAC+CGG 0.399043 1_3:+55868380 Msa0126770:intron
ATCCCTAAGATCTTAGTTGC+TGG 0.401540 1_3:-55872821 None:intergenic
ATCCATATGAAGTTCTGTTC+AGG 0.405654 1_3:+55868442 Msa0126770:CDS
TTTATTTACCAGGCTGAGAT+TGG 0.409163 1_3:+55864599 Msa0126770:intron
AATTCTGCAAGAGAAGTCTA+TGG 0.414810 1_3:+55864643 Msa0126770:CDS
TACATCTATAGTTACCGAAT+TGG 0.416199 1_3:+55872624 Msa0126770:three_prime_UTR
TCGTATAGTAAAGTAGCAAT+TGG 0.417834 1_3:-55872377 None:intergenic
ATCGTTAGATGGACTTCAAC+AGG 0.417942 1_3:+55862837 Msa0126770:CDS
CCTATAGCATCATAGCAGTT+TGG 0.418595 1_3:-55869348 None:intergenic
CTCCTGAACAGAACTTCATA+TGG 0.421045 1_3:-55868444 None:intergenic
CTCTACACCAATTAAATCAT+AGG 0.428333 1_3:-55867609 None:intergenic
TTCCACAAACTTAGCCAGCT+TGG 0.428764 1_3:-55865008 None:intergenic
AATTATACAGAATGCAAATA+CGG 0.434615 1_3:+55872714 Msa0126770:three_prime_UTR
ACCATTGAAGAAGATCTAAA+CGG 0.434766 1_3:+55862690 Msa0126770:CDS
CCCCAAACTCAGAGTTTAAG+TGG 0.436616 1_3:-55870992 None:intergenic
CCCGTTTAGATCTTCTTCAA+TGG 0.437299 1_3:-55862691 None:intergenic
CAAAATTCAAATGCACTTTG+AGG 0.439404 1_3:+55871451 Msa0126770:CDS
CATGTGATTTGAAGAAGAAA+AGG 0.439416 1_3:-55862425 None:intergenic
ATTCTTCAACAATGCCAATT+CGG 0.448022 1_3:-55872638 None:intergenic
GAAACTGAAGTTTGTAGAAG+TGG 0.448325 1_3:+55865913 Msa0126770:CDS
CCTAGATCAAATGCACTAGA+AGG 0.458119 1_3:-55862648 None:intergenic
CCAAACTGCTATGATGCTAT+AGG 0.459765 1_3:+55869348 Msa0126770:CDS
TGATTTGCGCAAAGTGGAGT+TGG 0.463004 1_3:+55863843 Msa0126770:CDS
CAAATCAATTTATTAAATTG+TGG 0.466205 1_3:-55872883 None:intergenic
TCAATATTTCCCTATGGCCT+CGG 0.467395 1_3:+55870844 Msa0126770:CDS
AGCATTGGAGAAACTGCAAT+TGG 0.468009 1_3:+55867574 Msa0126770:CDS
TGCTCATCCATGACACCAAA+AGG 0.473405 1_3:-55869309 None:intergenic
ATATGGATATTTAATAGAGC+TGG 0.474130 1_3:-55868427 None:intergenic
GGCAGGTCAATATTTCCCTA+TGG 0.475047 1_3:+55870838 Msa0126770:intron
GTTTATCAGGACTCGATGTT+GGG 0.475291 1_3:-55872212 None:intergenic
CCGTGCTTACATACAAGCAT+TGG 0.475768 1_3:+55867559 Msa0126770:CDS
GGTTTATCAGGACTCGATGT+TGG 0.478071 1_3:-55872213 None:intergenic
TTCCAGCAACTAAGATCTTA+GGG 0.478658 1_3:+55872819 Msa0126770:three_prime_UTR
ATCCAAGCTGGCTAAGTTTG+TGG 0.479760 1_3:+55865006 Msa0126770:CDS
CATTATTATCCCTCCGAGAA+TGG 0.482423 1_3:+55865033 Msa0126770:CDS
CCTATGGCCTCGGTTTAAGA+TGG 0.482544 1_3:+55870854 Msa0126770:CDS
AAGAAGTCATAGTTATCTGT+TGG 0.483385 1_3:+55872517 Msa0126770:three_prime_UTR
TATATGTACCATTGTGTTTG+AGG 0.486517 1_3:-55862522 None:intergenic
TTGCATTCTGTATAATTCCA+TGG 0.489937 1_3:-55872708 None:intergenic
GAGCAATACAGCATTATTTG+TGG 0.490021 1_3:+55871484 Msa0126770:CDS
CCCAAATCTCATCACGTCAA+TGG 0.498059 1_3:+55862362 Msa0126770:five_prime_UTR
CCATTGAAGAAGATCTAAAC+GGG 0.498176 1_3:+55862691 Msa0126770:CDS
ATGGTGGACATCCTTGTTGA+TGG 0.498798 1_3:+55865052 Msa0126770:CDS
AGTGATGATATATCGTTAGA+TGG 0.498874 1_3:+55862826 Msa0126770:intron
ACAAGGATGTCCACCATTCT+CGG 0.499451 1_3:-55865046 None:intergenic
AGCTCATTATGTCTCGGAGG+CGG 0.500639 1_3:+55869828 Msa0126770:intron
AACCCGAGCTTGAAAAGCTC+AGG 0.501245 1_3:+55865975 Msa0126770:CDS
TCGCATAATACACCAGCATC+AGG 0.502459 1_3:+55869386 Msa0126770:CDS
CACAAAGCCAAAACTACAAA+CGG 0.504050 1_3:+55871168 Msa0126770:CDS
CAGGAAGCAGGTCCTGAAGC+TGG 0.508420 1_3:+55871428 Msa0126770:intron
CTTGATAAGTAAATCATCAA+TGG 0.510022 1_3:-55871131 None:intergenic
CAAGAGAAGTCTATGGATAT+GGG 0.510930 1_3:+55864650 Msa0126770:CDS
AGTCTATGGATATGGGTTTG+AGG 0.513380 1_3:+55864657 Msa0126770:CDS
ACAGCAGATCGATTCTTTAG+CGG 0.514662 1_3:-55867671 None:intergenic
GGATAGGATTAATATATTGA+AGG 0.519305 1_3:+55867706 Msa0126770:CDS
AAAACTTAGAGATTATACTA+AGG 0.519810 1_3:+55863810 Msa0126770:CDS
GAATCTGGAACGACTTAGAA+TGG 0.521290 1_3:+55871108 Msa0126770:CDS
GATTCCATCAAGAGGATCCC+TGG 0.522126 1_3:+55872408 Msa0126770:CDS
TGCAACAAATATCAAGTCCA+TGG 0.523909 1_3:+55872691 Msa0126770:three_prime_UTR
GTTGCAAATATACTATCTAA+AGG 0.530234 1_3:+55863784 Msa0126770:CDS
CATCTTAAACCGAGGCCATA+GGG 0.530347 1_3:-55870853 None:intergenic
TTGTTCAATGCAGACCCACC+AGG 0.531672 1_3:-55872426 None:intergenic
CGTATAGTAAAGTAGCAATT+GGG 0.531794 1_3:-55872376 None:intergenic
TATTTCAGCTCATTATGTCT+CGG 0.532355 1_3:+55869822 Msa0126770:intron
GAGCTGGCTTCAGCTATATG+AGG 0.536113 1_3:-55868411 None:intergenic
CCACTTAAACTCTGAGTTTG+GGG 0.538247 1_3:+55870992 Msa0126770:CDS
CCATCTTAAACCGAGGCCAT+AGG 0.544335 1_3:-55870854 None:intergenic
CAGGCAGAAAGCAGTCTCAA+AGG 0.545719 1_3:+55865994 Msa0126770:CDS
CATGCTTGATTCCAGGAAGC+AGG 0.549332 1_3:+55871416 Msa0126770:intron
GACTCTCTGATTCCATCAAG+AGG 0.549335 1_3:+55872400 Msa0126770:CDS
ATTATACAGAATGCAAATAC+GGG 0.550875 1_3:+55872715 Msa0126770:three_prime_UTR
AAACTTAGAGATTATACTAA+GGG 0.553199 1_3:+55863811 Msa0126770:CDS
GAATTGGCATTGTTGAAGAA+TGG 0.553471 1_3:+55872640 Msa0126770:three_prime_UTR
TGAGAATGATTTGCGCAAAG+TGG 0.554547 1_3:+55863837 Msa0126770:CDS
TTGCATTTCGCAAACTGTTG+AGG 0.557428 1_3:-55870890 None:intergenic
CTTGGATTCTTATTTAGACA+AGG 0.558627 1_3:+55869859 Msa0126770:CDS
GGAAGTGGAGCCACTGGTGA+AGG 0.561875 1_3:+55872248 Msa0126770:CDS
TAACGCCTCATGACATAATG+AGG 0.563593 1_3:-55870945 None:intergenic
GTATGTTGTTAACTTTCTCA+AGG 0.565046 1_3:+55866791 Msa0126770:CDS
GTTAACTTTCTCAAGGAACA+TGG 0.568981 1_3:+55866798 Msa0126770:CDS
TCTAAATAAGAATCCAAGCA+TGG 0.575363 1_3:-55869854 None:intergenic
TTAAACTCTGAGTTTGGGGA+TGG 0.578938 1_3:+55870996 Msa0126770:CDS
CCAATGCTTGTATGTAAGCA+CGG 0.580622 1_3:-55867559 None:intergenic
TGATTTAATCAAGTTTGTCA+AGG 0.581810 1_3:+55872054 Msa0126770:CDS
TGGTGGGTCTGCATTGAACA+AGG 0.583690 1_3:+55872428 Msa0126770:CDS
GTCAGAATGTTACCTGATGC+TGG 0.583853 1_3:-55869398 None:intergenic
TGATAAACCTATAACTGTTG+CGG 0.590582 1_3:+55872227 Msa0126770:CDS
CATATGGAAACTCTGCTAAG+TGG 0.592668 1_3:+55864139 Msa0126770:CDS
CAATTTCTACACAAACAAGA+TGG 0.602918 1_3:+55862490 Msa0126770:exon
GCTATATGAGGAATCAATGC+CGG 0.605953 1_3:-55868399 None:intergenic
ATAGGTGGCTGAATCCAAGC+TGG 0.607893 1_3:+55864994 Msa0126770:intron
TTCATCCTCATTATGTCATG+AGG 0.609555 1_3:+55870940 Msa0126770:CDS
TGTTGCGGAAGTGGAGCCAC+TGG 0.613209 1_3:+55872242 Msa0126770:CDS
ATGCAAATGTGAAGACATTG+TGG 0.614201 1_3:+55870907 Msa0126770:CDS
TGGACTTCAACAGGAGCTTG+AGG 0.615166 1_3:+55862846 Msa0126770:CDS
ATGAGATTTGGGAGACACGT+CGG 0.618823 1_3:-55862351 None:intergenic
TTTGATCTAGGAGCATTCGT+TGG 0.622940 1_3:+55862660 Msa0126770:CDS
TATTATCCCTCCGAGAATGG+TGG 0.631865 1_3:+55865036 Msa0126770:CDS
TGCAAATGTGAAGACATTGT+GGG 0.634645 1_3:+55870908 Msa0126770:CDS
TCGAATACCATCTTAAACCG+AGG 0.634683 1_3:-55870861 None:intergenic
GTTTGTAGAAGTGGACACAA+TGG 0.634918 1_3:+55865922 Msa0126770:CDS
TTATGTCATGAGGCGTTATG+CGG 0.635931 1_3:+55870950 Msa0126770:CDS
GGATGTCCACCATTCTCGGA+GGG 0.636579 1_3:-55865042 None:intergenic
TTTGAGGCTTAAGAATCGCA+AGG 0.639267 1_3:+55864673 Msa0126770:CDS
TTCAGCTCATTATGTCTCGG+AGG 0.639985 1_3:+55869825 Msa0126770:intron
CCATCAAGAGGATCCCTGGT+GGG 0.646372 1_3:+55872412 Msa0126770:CDS
ATGAGATTAGGAAATATTCG+AGG 0.647688 1_3:+55872478 Msa0126770:CDS
TTTGAAGAAGAAAAGGTGTG+AGG 0.650533 1_3:-55862418 None:intergenic
GGACATCCTTGTTGATGGAG+AGG 0.650934 1_3:+55865057 Msa0126770:CDS
TCCATCAAGAGGATCCCTGG+TGG 0.661975 1_3:+55872411 Msa0126770:CDS
CTTGCAAAATCCTTCACCAG+TGG 0.665825 1_3:-55872258 None:intergenic
TTATATTGATACAATGAACA+AGG 0.679968 1_3:+55866851 Msa0126770:CDS
TGTTCAATGCAGACCCACCA+GGG 0.681342 1_3:-55872425 None:intergenic
ATAATACCTCTCCATCAACA+AGG 0.682669 1_3:-55865063 None:intergenic
TGATGTCGCCTCAAACACAA+TGG 0.699806 1_3:+55862514 Msa0126770:CDS
AGGATGTCCACCATTCTCGG+AGG 0.702552 1_3:-55865043 None:intergenic
CTGCAGATATAATTTCTGTG+AGG 0.705047 1_3:+55868601 Msa0126770:intron
GTAGAGACAAGAAGCAACAG+CGG 0.747225 1_3:+55867626 Msa0126770:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTATATCAATATTTT+CGG + chr1_3:55862971-55862990 Msa0126770:intron 10.0%
!!! AAATTTTAATTTTATTTACC+AGG + chr1_3:55864589-55864608 Msa0126770:intron 10.0%
!! AGAAATTAATAAAACATTAT+TGG - chr1_3:55865118-55865137 None:intergenic 10.0%
!! TTGATCAATAAAAATATTAA+AGG - chr1_3:55866900-55866919 None:intergenic 10.0%
!! TGTTATATTATTCAATTATT+TGG - chr1_3:55869642-55869661 None:intergenic 10.0%
!! AATAAAATATATTAGACTAA+GGG - chr1_3:55870729-55870748 None:intergenic 10.0%
!! AAATAAAATATATTAGACTA+AGG - chr1_3:55870730-55870749 None:intergenic 10.0%
!!! TTTTTTTTTTTTTTAACAAG+TGG - chr1_3:55872109-55872128 None:intergenic 10.0%
!!! TTGTAAAAAAAAAACATTTT+TGG + chr1_3:55872575-55872594 Msa0126770:three_prime_UTR 10.0%
!!! TTGTAATGTAATTTTTAATT+TGG + chr1_3:55872755-55872774 Msa0126770:three_prime_UTR 10.0%
!!! TGTAATGTAATTTTTAATTT+GGG + chr1_3:55872756-55872775 Msa0126770:three_prime_UTR 10.0%
!!! TAATAATCATTTTGGTAAAT+AGG - chr1_3:55863386-55863405 None:intergenic 15.0%
!!! TTTTTTTATATTCTTCTGAT+TGG + chr1_3:55863591-55863610 Msa0126770:intron 15.0%
!!! TCAATAATATCCTTTAAAAA+TGG + chr1_3:55864261-55864280 Msa0126770:intron 15.0%
!!! TAATGAAAGTATTTTACATT+TGG + chr1_3:55864321-55864340 Msa0126770:intron 15.0%
!! CTTATATCGTTTATATAAAA+TGG - chr1_3:55864704-55864723 None:intergenic 15.0%
!! GTTCATTAATATTTCTTTAA+TGG + chr1_3:55864838-55864857 Msa0126770:intron 15.0%
!! ATTAATATTTCTTTAATGGT+TGG + chr1_3:55864842-55864861 Msa0126770:intron 15.0%
!!! GTTTTATTAATTTCTTTTTG+TGG + chr1_3:55865123-55865142 Msa0126770:intron 15.0%
!!! ATATATATTTTCTAATACCT+TGG + chr1_3:55865381-55865400 Msa0126770:intron 15.0%
!! AAATATTAGTTAAAAAACCA+AGG - chr1_3:55865401-55865420 None:intergenic 15.0%
!!! TTTCATTATTTTTGTAACTT+TGG + chr1_3:55866728-55866747 Msa0126770:intron 15.0%
!!! TTCATTATTTTTGTAACTTT+GGG + chr1_3:55866729-55866748 Msa0126770:intron 15.0%
!!! AAAAATTGATAATTGTAACA+TGG - chr1_3:55867403-55867422 None:intergenic 15.0%
!! ATATCTATATGTCTAAATAT+TGG - chr1_3:55867436-55867455 None:intergenic 15.0%
!! AGATAGTATTATAAAACAAA+AGG - chr1_3:55867774-55867793 None:intergenic 15.0%
!!! AAATAAAAAGTATATAGCAA+AGG - chr1_3:55868027-55868046 None:intergenic 15.0%
!! AAAGAAATTCTTTAATCTAT+TGG - chr1_3:55868717-55868736 None:intergenic 15.0%
!! GCATTTAATATAATCAATAA+TGG + chr1_3:55868928-55868947 Msa0126770:intron 15.0%
!!! ATTTTCAGCAATTTTTTATT+GGG + chr1_3:55868967-55868986 Msa0126770:intron 15.0%
!!! AACTTTTTAAATAAATGCAT+TGG + chr1_3:55869088-55869107 Msa0126770:intron 15.0%
!!! AAAGGTACAAAAATAAAAAA+GGG - chr1_3:55869177-55869196 None:intergenic 15.0%
!!! AAAAGGTACAAAAATAAAAA+AGG - chr1_3:55869178-55869197 None:intergenic 15.0%
!!! TTTTTATTTTTGTACCTTTT+TGG + chr1_3:55869178-55869197 Msa0126770:intron 15.0%
!!! TTTTTTTACAAAACATACAT+TGG - chr1_3:55872566-55872585 None:intergenic 15.0%
!! CAAATCAATTTATTAAATTG+TGG - chr1_3:55872886-55872905 None:intergenic 15.0%
!! CACAATTTAATAAATTGATT+TGG + chr1_3:55872884-55872903 Msa0126770:three_prime_UTR 15.0%
!!! TTTAATAAATTGATTTGGAT+TGG + chr1_3:55872889-55872908 Msa0126770:three_prime_UTR 15.0%
!! AACTAAAACAGATTGTAATT+TGG - chr1_3:55862746-55862765 None:intergenic 20.0%
!! TCTATTAACTACAACTAATA+AGG - chr1_3:55863106-55863125 None:intergenic 20.0%
!! GATATAATCCAATAATCAAT+AGG + chr1_3:55863428-55863447 Msa0126770:intron 20.0%
!! ACTCAAAATAATTCTTCAAT+TGG + chr1_3:55863528-55863547 Msa0126770:intron 20.0%
!! ATGCTTAAAGTGAAATTAAT+TGG - chr1_3:55863565-55863584 None:intergenic 20.0%
!!! TTAGTATAATCTCTAAGTTT+TGG - chr1_3:55863811-55863830 None:intergenic 20.0%
!! AAAACTTAGAGATTATACTA+AGG + chr1_3:55863810-55863829 Msa0126770:CDS 20.0%
!! AAACTTAGAGATTATACTAA+GGG + chr1_3:55863811-55863830 Msa0126770:CDS 20.0%
!! TAATATAATCCTGCAATAAA+TGG - chr1_3:55864057-55864076 None:intergenic 20.0%
!! TATTATCACAATCATGAATT+TGG - chr1_3:55864111-55864130 None:intergenic 20.0%
!!! ATAATATCCTTTAAAAATGG+TGG + chr1_3:55864264-55864283 Msa0126770:intron 20.0%
!!! AATTTTAATGTCTGAACTTA+TGG - chr1_3:55864627-55864646 None:intergenic 20.0%
!! TATGTAGTATGTAGTATAAT+TGG + chr1_3:55864953-55864972 Msa0126770:intron 20.0%
!! TTAATAAAACATTATTGGAG+AGG - chr1_3:55865113-55865132 None:intergenic 20.0%
!!! TCATTTATTATCTAAGATCA+TGG + chr1_3:55865501-55865520 Msa0126770:intron 20.0%
!!! CAGAAATTTTCTTTTATTCT+GGG + chr1_3:55866074-55866093 Msa0126770:intron 20.0%
!!! AGTATTTGGATATTTGTTTT+GGG - chr1_3:55866197-55866216 None:intergenic 20.0%
!!! AAGTATTTGGATATTTGTTT+TGG - chr1_3:55866198-55866217 None:intergenic 20.0%
!! TAGATAAAATTGTACATTCA+AGG - chr1_3:55866512-55866531 None:intergenic 20.0%
!!! AAAACGTTTTCACAATTTAA+AGG - chr1_3:55866711-55866730 None:intergenic 20.0%
!!! AAATAGAAATGTAAAAGTGT+AGG + chr1_3:55866769-55866788 Msa0126770:intron 20.0%
!! TTATATTGATACAATGAACA+AGG + chr1_3:55866851-55866870 Msa0126770:CDS 20.0%
!! ATATAGATATTGAGTGAAAT+GGG + chr1_3:55867446-55867465 Msa0126770:intron 20.0%
!! TACTTTGAATTATTTGCTTT+AGG + chr1_3:55867977-55867996 Msa0126770:intron 20.0%
!!! TTTGTGAAAGTTATATTTTG+TGG + chr1_3:55868044-55868063 Msa0126770:intron 20.0%
!!! TTAAACTTTTATCCTCTAAA+GGG - chr1_3:55868121-55868140 None:intergenic 20.0%
!!! TTTAAACTTTTATCCTCTAA+AGG - chr1_3:55868122-55868141 None:intergenic 20.0%
!! AATTATAAACGATGATTGAT+AGG + chr1_3:55868140-55868159 Msa0126770:intron 20.0%
!!! GTATAAATTTTGATTGAGTT+TGG - chr1_3:55868292-55868311 None:intergenic 20.0%
!! TGAAATAATGTCAAATCTTA+AGG - chr1_3:55868366-55868385 None:intergenic 20.0%
!! TTAAGATTTGACATTATTTC+AGG + chr1_3:55868365-55868384 Msa0126770:intron 20.0%
!!! ATGTTCTATGAAATTTTTTC+AGG + chr1_3:55868644-55868663 Msa0126770:CDS 20.0%
!! AAAATGAACTTTGTTAGATT+CGG + chr1_3:55868752-55868771 Msa0126770:intron 20.0%
!! TAATATAATCAATAATGGCA+TGG + chr1_3:55868933-55868952 Msa0126770:intron 20.0%
!! CAATAAAAAATTGCTGAAAA+TGG - chr1_3:55868968-55868987 None:intergenic 20.0%
!!! CATTTTCAGCAATTTTTTAT+TGG + chr1_3:55868966-55868985 Msa0126770:intron 20.0%
!! TGTTTGTTTATATACCAAAA+AGG - chr1_3:55869195-55869214 None:intergenic 20.0%
!!! AAGTTTTTCATTTTCAGATA+TGG + chr1_3:55869236-55869255 Msa0126770:intron 20.0%
!!! AGTTTTTCATTTTCAGATAT+GGG + chr1_3:55869237-55869256 Msa0126770:intron 20.0%
!! AGTTATAACATTGAAATTTC+TGG + chr1_3:55870034-55870053 Msa0126770:intron 20.0%
!! GTTATAACATTGAAATTTCT+GGG + chr1_3:55870035-55870054 Msa0126770:intron 20.0%
!! TTATAACATTGAAATTTCTG+GGG + chr1_3:55870036-55870055 Msa0126770:intron 20.0%
!! TTAAAGCTAATTCATAACTT+TGG + chr1_3:55870817-55870836 Msa0126770:intron 20.0%
!! TGCATTAGAAATTTACAAAA+AGG - chr1_3:55871057-55871076 None:intergenic 20.0%
!! AAATTAAAGTTCGTGTTTAA+TGG + chr1_3:55871544-55871563 Msa0126770:intron 20.0%
!!! TGTAATTTTCAAAAAGAAGA+TGG + chr1_3:55871894-55871913 Msa0126770:intron 20.0%
!!! GTAATTTTCAAAAAGAAGAT+GGG + chr1_3:55871895-55871914 Msa0126770:intron 20.0%
!! TTAAATCATTAAAATGCTCT+TGG - chr1_3:55872042-55872061 None:intergenic 20.0%
!!! ATTCAATATTTGCTAAACTA+TGG + chr1_3:55872158-55872177 Msa0126770:intron 20.0%
!!! TTCAATATTTGCTAAACTAT+GGG + chr1_3:55872159-55872178 Msa0126770:intron 20.0%
!! AAAACATACATTGGATATTA+TGG - chr1_3:55872557-55872576 None:intergenic 20.0%
!! AATTATACAGAATGCAAATA+CGG + chr1_3:55872714-55872733 Msa0126770:three_prime_UTR 20.0%
! AATTTCAGTGTAACAGAAAA+CGG - chr1_3:55862559-55862578 None:intergenic 25.0%
!!! ATTAGTTGTGTTGATTTCAA+CGG + chr1_3:55863053-55863072 Msa0126770:intron 25.0%
!! CAATGAATAAGAGTATATAG+TGG + chr1_3:55863147-55863166 Msa0126770:intron 25.0%
! GCAAATAATCAATGTTTCAT+TGG + chr1_3:55863172-55863191 Msa0126770:intron 25.0%
! CAAAATAATTCTTCAATTGG+AGG + chr1_3:55863531-55863550 Msa0126770:intron 25.0%
!! TAGCTAGAAGTATAATTGAA+AGG - chr1_3:55863712-55863731 None:intergenic 25.0%
! CTTAATAACTTACATATGTG+TGG - chr1_3:55863743-55863762 None:intergenic 25.0%
! GTTGCAAATATACTATCTAA+AGG + chr1_3:55863784-55863803 Msa0126770:CDS 25.0%
! TGATAATATCTTGTCACATA+TGG + chr1_3:55864123-55864142 Msa0126770:CDS 25.0%
!! ATTATTGACTAACTAAGAAC+TGG - chr1_3:55864249-55864268 None:intergenic 25.0%
!!! ACATTTACCACCATTTTTAA+AGG - chr1_3:55864274-55864293 None:intergenic 25.0%
!! AAATGTGTTTTCCTGATTTT+CGG + chr1_3:55864288-55864307 Msa0126770:intron 25.0%
!!! AAAGTATTTTACATTTGGAG+TGG + chr1_3:55864326-55864345 Msa0126770:intron 25.0%
! TCAATTAATATTACGCCAAA+AGG - chr1_3:55864754-55864773 None:intergenic 25.0%
!! AATTGATTATCAGTTTGTTC+TGG + chr1_3:55864768-55864787 Msa0126770:intron 25.0%
!!! TCTTGTTTTTTTCTCTCAAT+AGG + chr1_3:55864976-55864995 Msa0126770:intron 25.0%
!!! TCTCTTGTTTGATTTTGTTT+AGG + chr1_3:55865615-55865634 Msa0126770:intron 25.0%
! AGAAAGAAATCTAACTAGAA+GGG - chr1_3:55865833-55865852 None:intergenic 25.0%
! CATCAATAACAGTATTAGTA+TGG + chr1_3:55866024-55866043 Msa0126770:intron 25.0%
!! GCAGAAATTTTCTTTTATTC+TGG + chr1_3:55866073-55866092 Msa0126770:intron 25.0%
! AAACTCACTTGTACTTTAAA+AGG - chr1_3:55866232-55866251 None:intergenic 25.0%
!!! TTTTAGAATGTATAGCTTGA+TGG + chr1_3:55866262-55866281 Msa0126770:intron 25.0%
! ATTCTGAATTCCTATTGATA+AGG + chr1_3:55866300-55866319 Msa0126770:intron 25.0%
! AGATAAAACTAATTGCTAGA+GGG - chr1_3:55866327-55866346 None:intergenic 25.0%
! TAGATAAAACTAATTGCTAG+AGG - chr1_3:55866328-55866347 None:intergenic 25.0%
! TGTTATTGAACTACTATTGA+AGG + chr1_3:55866577-55866596 Msa0126770:intron 25.0%
! TTATCCTAAATAATGCTATG+AGG + chr1_3:55866924-55866943 Msa0126770:intron 25.0%
!!! TTTTTTGAAAACAACTTTGC+TGG - chr1_3:55867048-55867067 None:intergenic 25.0%
! TATGTATTCAATCAAAGTGT+AGG + chr1_3:55867151-55867170 Msa0126770:intron 25.0%
!!! TGGTAGCATTTTAAAATCTT+TGG + chr1_3:55867243-55867262 Msa0126770:intron 25.0%
!!! TTCATTCTATGTTAATTTGC+TGG + chr1_3:55867291-55867310 Msa0126770:intron 25.0%
! CATATAGATATTGAGTGAAA+TGG + chr1_3:55867445-55867464 Msa0126770:intron 25.0%
! GGATAGGATTAATATATTGA+AGG + chr1_3:55867706-55867725 Msa0126770:CDS 25.0%
! TTCAACTGTTAATTCTTCAA+TGG + chr1_3:55868233-55868252 Msa0126770:intron 25.0%
! ATATGGATATTTAATAGAGC+TGG - chr1_3:55868430-55868449 None:intergenic 25.0%
! TGTCAACATGTATATAACTA+GGG - chr1_3:55868567-55868586 None:intergenic 25.0%
! ATGTCAACATGTATATAACT+AGG - chr1_3:55868568-55868587 None:intergenic 25.0%
!! AATTTCTGTGAGGATTTTTA+TGG + chr1_3:55868611-55868630 Msa0126770:CDS 25.0%
!! ATTTCTGTGAGGATTTTTAT+GGG + chr1_3:55868612-55868631 Msa0126770:CDS 25.0%
!!! AATTTTTTCAGGTATTGTGA+TGG + chr1_3:55868655-55868674 Msa0126770:intron 25.0%
!! GATGGAGTTTTTAAATTTTG+TGG + chr1_3:55868673-55868692 Msa0126770:intron 25.0%
! AAATTTAAACTATGCCAACA+TGG + chr1_3:55868802-55868821 Msa0126770:intron 25.0%
! AATTTAAACTATGCCAACAT+GGG + chr1_3:55868803-55868822 Msa0126770:intron 25.0%
! TTAAAGACAAAATGATACAG+TGG - chr1_3:55869218-55869237 None:intergenic 25.0%
!! TTTTCATTGGAATTTCAAGA+GGG - chr1_3:55869572-55869591 None:intergenic 25.0%
! TCAGTTTCAAATTGTTTGAA+AGG - chr1_3:55869792-55869811 None:intergenic 25.0%
!! CAAAATGAGGAGATATTTTT+GGG - chr1_3:55870361-55870380 None:intergenic 25.0%
! AATGTTCTCATAAAAAGTTG+AGG - chr1_3:55870454-55870473 None:intergenic 25.0%
!! TCAACTTTTTATGAGAACAT+TGG + chr1_3:55870453-55870472 Msa0126770:intron 25.0%
!!! TTAGCTTTAAATATGACTCA+CGG - chr1_3:55870807-55870826 None:intergenic 25.0%
! TAGAAATTTACAAAAAGGAG+TGG - chr1_3:55871052-55871071 None:intergenic 25.0%
! CTTGATAAGTAAATCATCAA+TGG - chr1_3:55871134-55871153 None:intergenic 25.0%
!!! TATCAATTTTGGAATATCCA+GGG + chr1_3:55871374-55871393 Msa0126770:intron 25.0%
!! TTAAGACTGAAACTCTTTTT+CGG + chr1_3:55871700-55871719 Msa0126770:intron 25.0%
! AGTTCTGTGTTAAATTAAGT+GGG + chr1_3:55871787-55871806 Msa0126770:intron 25.0%
! ATTTACTTGTTTCCTTTAGA+TGG - chr1_3:55871865-55871884 None:intergenic 25.0%
!! TGTATTCATTGATTATTTCG+TGG + chr1_3:55871922-55871941 Msa0126770:intron 25.0%
! TGATTTAATCAAGTTTGTCA+AGG + chr1_3:55872054-55872073 Msa0126770:CDS 25.0%
! TACATTGGATATTATGGATT+TGG - chr1_3:55872551-55872570 None:intergenic 25.0%
!!! TAAGATTTTTTTGCTCGTTT+TGG + chr1_3:55872600-55872619 Msa0126770:three_prime_UTR 25.0%
!!! AAGATTTTTTTGCTCGTTTT+GGG + chr1_3:55872601-55872620 Msa0126770:three_prime_UTR 25.0%
! ATTATACAGAATGCAAATAC+GGG + chr1_3:55872715-55872734 Msa0126770:three_prime_UTR 25.0%
CATGTGATTTGAAGAAGAAA+AGG - chr1_3:55862428-55862447 None:intergenic 30.0%
CAATTTCTACACAAACAAGA+TGG + chr1_3:55862490-55862509 Msa0126770:exon 30.0%
TATATGTACCATTGTGTTTG+AGG - chr1_3:55862525-55862544 None:intergenic 30.0%
ACCATTGAAGAAGATCTAAA+CGG + chr1_3:55862690-55862709 Msa0126770:CDS 30.0%
AGTGATGATATATCGTTAGA+TGG + chr1_3:55862826-55862845 Msa0126770:intron 30.0%
! AATTCATTGGTATTCTGAAG+TGG + chr1_3:55863299-55863318 Msa0126770:intron 30.0%
AGACACTTATAATGAGATGA+GGG + chr1_3:55863356-55863375 Msa0126770:intron 30.0%
! TACGCGGTTAATAATCATTT+TGG - chr1_3:55863394-55863413 None:intergenic 30.0%
TGTTTCTCAATTGAAGAGTT+TGG + chr1_3:55863470-55863489 Msa0126770:intron 30.0%
TTCTTTATGTGCATAGTCAA+AGG + chr1_3:55863650-55863669 Msa0126770:intron 30.0%
! AGAAGTATAATTGAAAGGCA+GGG - chr1_3:55863707-55863726 None:intergenic 30.0%
! TAGAAGTATAATTGAAAGGC+AGG - chr1_3:55863708-55863727 None:intergenic 30.0%
CTAGCAAAGAAGAAACAAAA+TGG - chr1_3:55863916-55863935 None:intergenic 30.0%
AACAAAAATTGTCGAGATTG+TGG - chr1_3:55864354-55864373 None:intergenic 30.0%
ATATACTAACAGATCCTCAA+AGG - chr1_3:55864466-55864485 None:intergenic 30.0%
TCGTTTATTCGATCATTTGA+AGG + chr1_3:55864510-55864529 Msa0126770:intron 30.0%
! TTCATAATTGTAGCACCTTT+TGG + chr1_3:55864736-55864755 Msa0126770:intron 30.0%
GGAAATCAAATTGCATCAAA+AGG + chr1_3:55864789-55864808 Msa0126770:intron 30.0%
TTCTATTCATGTTTGGATGA+GGG + chr1_3:55864867-55864886 Msa0126770:intron 30.0%
ACAGAAAAACTTAATTCGCT+GGG - chr1_3:55864914-55864933 None:intergenic 30.0%
ATACTACATATAACACATGC+AGG - chr1_3:55864943-55864962 None:intergenic 30.0%
!!! TGTTTTTTTCTCTCAATAGG+TGG + chr1_3:55864979-55864998 Msa0126770:intron 30.0%
AAACCTTATAAGTACTACCT+AGG - chr1_3:55865220-55865239 None:intergenic 30.0%
TAGGTAGTACTTATAAGGTT+TGG + chr1_3:55865219-55865238 Msa0126770:intron 30.0%
!! ACCTTATAAGTCAGTTTTGT+GGG + chr1_3:55865251-55865270 Msa0126770:intron 30.0%
TACCTTAAATTCAGGACTTA+GGG - chr1_3:55865287-55865306 None:intergenic 30.0%
ATACCTTAAATTCAGGACTT+AGG - chr1_3:55865288-55865307 None:intergenic 30.0%
GCAAACAATACCTTAAATTC+AGG - chr1_3:55865295-55865314 None:intergenic 30.0%
TCCTTAGAGAATCAACTAAA+AGG + chr1_3:55865552-55865571 Msa0126770:intron 30.0%
!! TCCTTTTAGTTGATTCTCTA+AGG - chr1_3:55865556-55865575 None:intergenic 30.0%
!!! ATTGACAGTTTTATTGTTGC+TGG + chr1_3:55865661-55865680 Msa0126770:intron 30.0%
GAGAAAGAAATCTAACTAGA+AGG - chr1_3:55865834-55865853 None:intergenic 30.0%
GTTAGATTTCTTTCTCACTT+TGG + chr1_3:55865838-55865857 Msa0126770:intron 30.0%
!!! CTATTCATTGCTATTTTGAC+TGG + chr1_3:55866445-55866464 Msa0126770:intron 30.0%
! ACGTTTTCACAATTTAAAGG+TGG - chr1_3:55866708-55866727 None:intergenic 30.0%
GTATGTTGTTAACTTTCTCA+AGG + chr1_3:55866791-55866810 Msa0126770:CDS 30.0%
ACATAGAATGAAAGTAAGTC+AGG - chr1_3:55867283-55867302 None:intergenic 30.0%
! AATGGGTATAATGATTTTGC+AGG + chr1_3:55867463-55867482 Msa0126770:intron 30.0%
! ATGGGTATAATGATTTTGCA+GGG + chr1_3:55867464-55867483 Msa0126770:intron 30.0%
GCAACATCCTATGATTTAAT+TGG + chr1_3:55867602-55867621 Msa0126770:CDS 30.0%
CTCTACACCAATTAAATCAT+AGG - chr1_3:55867612-55867631 None:intergenic 30.0%
! ATAGTTTTTCCCTTTTTCCT+AGG - chr1_3:55867742-55867761 None:intergenic 30.0%
! AAGTTATATTTTGTGGTCCT+TGG + chr1_3:55868051-55868070 Msa0126770:intron 30.0%
ACTGTTAATTCTTCAATGGA+AGG + chr1_3:55868237-55868256 Msa0126770:intron 30.0%
ATTTCAGGAAATTGATGAAC+CGG + chr1_3:55868380-55868399 Msa0126770:intron 30.0%
AAATTATATCTGCAGATGCA+AGG - chr1_3:55868596-55868615 None:intergenic 30.0%
! TTTCTGTGAGGATTTTTATG+GGG + chr1_3:55868613-55868632 Msa0126770:CDS 30.0%
!!! TATGCCTTTTTGGTTTATAC+AGG + chr1_3:55869285-55869304 Msa0126770:intron 30.0%
AAACCACATTGATACTATTG+CGG + chr1_3:55869470-55869489 Msa0126770:intron 30.0%
AATTCTTGGAACAAGATGAT+GGG - chr1_3:55869536-55869555 None:intergenic 30.0%
AAATTCTTGGAACAAGATGA+TGG - chr1_3:55869537-55869556 None:intergenic 30.0%
! GTTTTCATTGGAATTTCAAG+AGG - chr1_3:55869573-55869592 None:intergenic 30.0%
CTGAAACATAAAATGCAGAT+TGG - chr1_3:55869704-55869723 None:intergenic 30.0%
TATTTCAGCTCATTATGTCT+CGG + chr1_3:55869822-55869841 Msa0126770:intron 30.0%
TCTAAATAAGAATCCAAGCA+TGG - chr1_3:55869857-55869876 None:intergenic 30.0%
! CTTGGATTCTTATTTAGACA+AGG + chr1_3:55869859-55869878 Msa0126770:CDS 30.0%
ATAGTTAGAATCCTCAAGAT+TGG + chr1_3:55870180-55870199 Msa0126770:intron 30.0%
TAGTTAGAATCCTCAAGATT+GGG + chr1_3:55870181-55870200 Msa0126770:intron 30.0%
! CCAAAATGAGGAGATATTTT+TGG - chr1_3:55870362-55870381 None:intergenic 30.0%
! CCAAAAATATCTCCTCATTT+TGG + chr1_3:55870359-55870378 Msa0126770:intron 30.0%
! AGAATTTGATGACCAAAATG+AGG - chr1_3:55870374-55870393 None:intergenic 30.0%
! AAGTTGAGGTTAGTCATATT+GGG - chr1_3:55870440-55870459 None:intergenic 30.0%
! AAAGTTGAGGTTAGTCATAT+TGG - chr1_3:55870441-55870460 None:intergenic 30.0%
TATGACTTCTATAGGTAGAA+CGG - chr1_3:55870599-55870618 None:intergenic 30.0%
TAGTCATCTATGACTTCTAT+AGG - chr1_3:55870607-55870626 None:intergenic 30.0%
TATAGAAGTCATAGATGACT+AGG + chr1_3:55870606-55870625 Msa0126770:intron 30.0%
TTTCGTCATTGAACAATAGA+AGG - chr1_3:55870770-55870789 None:intergenic 30.0%
CTATTGTTCAATGACGAAAA+TGG + chr1_3:55870771-55870790 Msa0126770:intron 30.0%
!! GTTTTGTTCAAGTACTTTCT+AGG - chr1_3:55871299-55871318 None:intergenic 30.0%
AAAACTCCATTTCAAATTGC+TGG + chr1_3:55871314-55871333 Msa0126770:intron 30.0%
!!! ATAGCTTGCTCTATCAATTT+TGG + chr1_3:55871363-55871382 Msa0126770:intron 30.0%
!!! CTATCAATTTTGGAATATCC+AGG + chr1_3:55871373-55871392 Msa0126770:intron 30.0%
CAAAATTCAAATGCACTTTG+AGG + chr1_3:55871451-55871470 Msa0126770:CDS 30.0%
!! CTTTAATTTGCAACAAAACC+AGG - chr1_3:55871533-55871552 None:intergenic 30.0%
!! TTGCTATTTCTTCACATTGT+TGG + chr1_3:55871603-55871622 Msa0126770:intron 30.0%
GAAACTAAATTTCGACTAAG+TGG - chr1_3:55871652-55871671 None:intergenic 30.0%
TAATTCATTTCCTTCAGATC+AGG - chr1_3:55871745-55871764 None:intergenic 30.0%
GAATTAGAAATAAGACTAGC+TGG + chr1_3:55871759-55871778 Msa0126770:intron 30.0%
GAGTTCTGTGTTAAATTAAG+TGG + chr1_3:55871786-55871805 Msa0126770:intron 30.0%
GTTCTGTGTTAAATTAAGTG+GGG + chr1_3:55871788-55871807 Msa0126770:intron 30.0%
TTCTGTGTTAAATTAAGTGG+GGG + chr1_3:55871789-55871808 Msa0126770:intron 30.0%
!! AATAGTTTGTTATCAGCAAG+TGG - chr1_3:55871828-55871847 None:intergenic 30.0%
! ATTTTTCTTTCAATCCTTGC+AGG + chr1_3:55872006-55872025 Msa0126770:intron 30.0%
ATGTAAATAAGATGCGACAT+TGG - chr1_3:55872140-55872159 None:intergenic 30.0%
TGATAAACCTATAACTGTTG+CGG + chr1_3:55872227-55872246 Msa0126770:CDS 30.0%
!!! TCTTTCAGCAATTTTTTGTG+CGG + chr1_3:55872327-55872346 Msa0126770:CDS 30.0%
CGTATAGTAAAGTAGCAATT+GGG - chr1_3:55872379-55872398 None:intergenic 30.0%
TCGTATAGTAAAGTAGCAAT+TGG - chr1_3:55872380-55872399 None:intergenic 30.0%
CTCATACATGATTGAAGATA+TGG - chr1_3:55872463-55872482 None:intergenic 30.0%
CTTCAATCATGTATGAGATT+AGG + chr1_3:55872466-55872485 Msa0126770:CDS 30.0%
ATGAGATTAGGAAATATTCG+AGG + chr1_3:55872478-55872497 Msa0126770:CDS 30.0%
AAGAAGTCATAGTTATCTGT+TGG + chr1_3:55872517-55872536 Msa0126770:three_prime_UTR 30.0%
TACATCTATAGTTACCGAAT+TGG + chr1_3:55872624-55872643 Msa0126770:three_prime_UTR 30.0%
ATTCTTCAACAATGCCAATT+CGG - chr1_3:55872641-55872660 None:intergenic 30.0%
TTGCATTCTGTATAATTCCA+TGG - chr1_3:55872711-55872730 None:intergenic 30.0%
! TTTGAAGAAGAAAAGGTGTG+AGG - chr1_3:55862421-55862440 None:intergenic 35.0%
AGTGTAACAGAAAACGGTTA+TGG - chr1_3:55862553-55862572 None:intergenic 35.0%
CCATTGAAGAAGATCTAAAC+GGG + chr1_3:55862691-55862710 Msa0126770:CDS 35.0%
!!! TTTTCGGTTGTAGCTTTGTA+AGG + chr1_3:55862987-55863006 Msa0126770:intron 35.0%
TTCATTGGTATTAACCCACT+TGG + chr1_3:55863187-55863206 Msa0126770:intron 35.0%
TCATTGGTATTAACCCACTT+GGG + chr1_3:55863188-55863207 Msa0126770:intron 35.0%
!! TTCTGAAGTGGCAATTAACT+TGG + chr1_3:55863311-55863330 Msa0126770:intron 35.0%
GAGACACTTATAATGAGATG+AGG + chr1_3:55863355-55863374 Msa0126770:intron 35.0%
TCGAATTGTTCTCATATACG+CGG - chr1_3:55863410-55863429 None:intergenic 35.0%
! CAAGGTCTCCTATTGATTAT+TGG - chr1_3:55863439-55863458 None:intergenic 35.0%
!! AATTGAAGAGTTTGGTGTAC+TGG + chr1_3:55863478-55863497 Msa0126770:intron 35.0%
!! ATTGAAGAGTTTGGTGTACT+GGG + chr1_3:55863479-55863498 Msa0126770:intron 35.0%
!! CTTCTGATTGGCTTCATTTA+AGG + chr1_3:55863603-55863622 Msa0126770:intron 35.0%
! TAAGTTGTTGTTCTCTGTGT+AGG + chr1_3:55863759-55863778 Msa0126770:intron 35.0%
AAAGAAGAAACAAAATGGCG+TGG - chr1_3:55863911-55863930 None:intergenic 35.0%
! TAAGTGGATTTCAGGTATGT+TGG + chr1_3:55864155-55864174 Msa0126770:intron 35.0%
TGACTAACTAAGAACTGGTT+GGG - chr1_3:55864244-55864263 None:intergenic 35.0%
TTGACTAACTAAGAACTGGT+TGG - chr1_3:55864245-55864264 None:intergenic 35.0%
TAGACACTTCATTGTTGCAA+GGG - chr1_3:55864436-55864455 None:intergenic 35.0%
ATAGACACTTCATTGTTGCA+AGG - chr1_3:55864437-55864456 None:intergenic 35.0%
TTTATTTACCAGGCTGAGAT+TGG + chr1_3:55864599-55864618 Msa0126770:intron 35.0%
AATTCTGCAAGAGAAGTCTA+TGG + chr1_3:55864643-55864662 Msa0126770:CDS 35.0%
CAAGAGAAGTCTATGGATAT+GGG + chr1_3:55864650-55864669 Msa0126770:CDS 35.0%
GTTGGACTTCTATTCATGTT+TGG + chr1_3:55864860-55864879 Msa0126770:intron 35.0%
CTTCTATTCATGTTTGGATG+AGG + chr1_3:55864866-55864885 Msa0126770:intron 35.0%
TCTATTCATGTTTGGATGAG+GGG + chr1_3:55864868-55864887 Msa0126770:intron 35.0%
GACAGAAAAACTTAATTCGC+TGG - chr1_3:55864915-55864934 None:intergenic 35.0%
ATAATACCTCTCCATCAACA+AGG - chr1_3:55865066-55865085 None:intergenic 35.0%
! TATTTGTTGAGACTTGAGTC+CGG + chr1_3:55865176-55865195 Msa0126770:intron 35.0%
! CACCTTATAAGTCAGTTTTG+TGG + chr1_3:55865250-55865269 Msa0126770:intron 35.0%
! ACCCACAAAACTGACTTATA+AGG - chr1_3:55865255-55865274 None:intergenic 35.0%
CATAACAAATATTGCAGTGC+CGG + chr1_3:55865434-55865453 Msa0126770:intron 35.0%
GTGTTTATAATGTTGTGTGC+AGG - chr1_3:55865478-55865497 None:intergenic 35.0%
GCACACAACATTATAAACAC+TGG + chr1_3:55865478-55865497 Msa0126770:intron 35.0%
GCATTTGTAAACTAGTGTCT+TGG + chr1_3:55865523-55865542 Msa0126770:intron 35.0%
!! TTGGTCTTCTTTGGCATTTT+AGG + chr1_3:55865698-55865717 Msa0126770:intron 35.0%
CTAGAAGGGAATATACTAGT+AGG - chr1_3:55865819-55865838 None:intergenic 35.0%
GAAACTGAAGTTTGTAGAAG+TGG + chr1_3:55865913-55865932 Msa0126770:CDS 35.0%
TGGATGGATAACAGATGATA+TGG - chr1_3:55866125-55866144 None:intergenic 35.0%
! GGACACTTTGTTGAAGTATT+TGG - chr1_3:55866211-55866230 None:intergenic 35.0%
ATTTAAAGGTGGTTAACGCA+AGG - chr1_3:55866697-55866716 None:intergenic 35.0%
GTTAACTTTCTCAAGGAACA+TGG + chr1_3:55866798-55866817 Msa0126770:CDS 35.0%
CCATCCTCATAGCATTATTT+AGG - chr1_3:55866931-55866950 None:intergenic 35.0%
CCTAAATAATGCTATGAGGA+TGG + chr1_3:55866928-55866947 Msa0126770:intron 35.0%
AAACAACTTTGCTGGCATAT+GGG - chr1_3:55867040-55867059 None:intergenic 35.0%
AAAACAACTTTGCTGGCATA+TGG - chr1_3:55867041-55867060 None:intergenic 35.0%
ATAAAAGACTTAGAGCCTGT+TGG + chr1_3:55867106-55867125 Msa0126770:intron 35.0%
!!! AAAACTAGCTTTTTGCCAAC+AGG - chr1_3:55867124-55867143 None:intergenic 35.0%
!! AATCTTTGGTAGCTTTGAGT+TGG + chr1_3:55867257-55867276 Msa0126770:intron 35.0%
!! TGTTAATTTGCTGGCTTTCA+CGG + chr1_3:55867300-55867319 Msa0126770:intron 35.0%
GAAAATAGAAGTCTTCCATG+TGG - chr1_3:55867337-55867356 None:intergenic 35.0%
TGTAATATGTATGAGCTGAG+TGG + chr1_3:55867359-55867378 Msa0126770:intron 35.0%
GTAATATGTATGAGCTGAGT+GGG + chr1_3:55867360-55867379 Msa0126770:intron 35.0%
TTGTAACATGGATCAGTGAT+TGG - chr1_3:55867391-55867410 None:intergenic 35.0%
TATGACTCAACCTAGGAAAA+AGG + chr1_3:55867729-55867748 Msa0126770:intron 35.0%
ATGACTCAACCTAGGAAAAA+GGG + chr1_3:55867730-55867749 Msa0126770:intron 35.0%
AATACTATCTGAATTGACCG+AGG + chr1_3:55867784-55867803 Msa0126770:intron 35.0%
AAAGAAATACATGGACTCCT+CGG - chr1_3:55867804-55867823 None:intergenic 35.0%
GTCCATGTATTTCTTTCCAT+TGG + chr1_3:55867808-55867827 Msa0126770:intron 35.0%
CACCAATGGAAAGAAATACA+TGG - chr1_3:55867813-55867832 None:intergenic 35.0%
AAATGAACTACTGACACCAA+TGG - chr1_3:55867827-55867846 None:intergenic 35.0%
! TAGTTCATTTTGAGCAGTGA+AGG + chr1_3:55867837-55867856 Msa0126770:intron 35.0%
AATTATATTTCCTGCCCCTA+GGG + chr1_3:55867918-55867937 Msa0126770:intron 35.0%
CAGTCACATTAACAATACCA+AGG - chr1_3:55868071-55868090 None:intergenic 35.0%
CTTGGTATTGTTAATGTGAC+TGG + chr1_3:55868069-55868088 Msa0126770:intron 35.0%
! TTTTACACTCTTTACTTGCG+AGG + chr1_3:55868264-55868283 Msa0126770:intron 35.0%
ATTGTGTAGTCATTGGGTTA+TGG + chr1_3:55868340-55868359 Msa0126770:intron 35.0%
ATCCATATGAAGTTCTGTTC+AGG + chr1_3:55868442-55868461 Msa0126770:CDS 35.0%
CTGCAGATATAATTTCTGTG+AGG + chr1_3:55868601-55868620 Msa0126770:intron 35.0%
!!! ACCATTTTTTGTTCCCATGT+TGG - chr1_3:55868819-55868838 None:intergenic 35.0%
AAATGCTAATGAGTTCCCTA+AGG + chr1_3:55868990-55869009 Msa0126770:intron 35.0%
AATGCTAATGAGTTCCCTAA+GGG + chr1_3:55868991-55869010 Msa0126770:intron 35.0%
AATATGCGTATTCAGTGCAT+TGG + chr1_3:55869051-55869070 Msa0126770:intron 35.0%
! TCATTTTCAGATATGGGTTC+AGG + chr1_3:55869243-55869262 Msa0126770:intron 35.0%
!! TATGGGTTCAGGTTTTGTAT+AGG + chr1_3:55869254-55869273 Msa0126770:intron 35.0%
! GGTCAATTGATATGCCTTTT+TGG + chr1_3:55869275-55869294 Msa0126770:intron 35.0%
AGGACCTGTATAAACCAAAA+AGG - chr1_3:55869292-55869311 None:intergenic 35.0%
! TTGGTTTATACAGGTCCTTT+TGG + chr1_3:55869294-55869313 Msa0126770:intron 35.0%
! AACATTCTGACTTGTAAGAG+TGG + chr1_3:55869410-55869429 Msa0126770:intron 35.0%
GTTTGCATTACACCTTCTTT+AGG - chr1_3:55869496-55869515 None:intergenic 35.0%
GTGGCTATGAATCAAATTCT+TGG - chr1_3:55869550-55869569 None:intergenic 35.0%
GGTAATTGCTTCTCAAGAAA+TGG - chr1_3:55869621-55869640 None:intergenic 35.0%
CCAACATTCACATTACTGTT+TGG - chr1_3:55869740-55869759 None:intergenic 35.0%
CCAAACAGTAATGTGAATGT+TGG + chr1_3:55869737-55869756 Msa0126770:intron 35.0%
AGAACCCTACAAGAATTGTA+GGG - chr1_3:55870004-55870023 None:intergenic 35.0%
!! CATTGAAATTTCTGGGGTAT+CGG + chr1_3:55870042-55870061 Msa0126770:intron 35.0%
ATCTGTACAACCAACATACA+TGG + chr1_3:55870152-55870171 Msa0126770:intron 35.0%
TCTGTACAACCAACATACAT+GGG + chr1_3:55870153-55870172 Msa0126770:intron 35.0%
ACTATGTTTCCCATGTATGT+TGG - chr1_3:55870165-55870184 None:intergenic 35.0%
GATGCTTATTCACTAGTTCA+TGG - chr1_3:55870293-55870312 None:intergenic 35.0%
GAAAAATGAAACCCGTAATG+AGG - chr1_3:55870416-55870435 None:intergenic 35.0%
! TTTTTATGAGAACATTGGCG+AGG + chr1_3:55870458-55870477 Msa0126770:intron 35.0%
! TTTTATGAGAACATTGGCGA+GGG + chr1_3:55870459-55870478 Msa0126770:intron 35.0%
!! TTTAACATGTCAGGTGTTGA+TGG - chr1_3:55870533-55870552 None:intergenic 35.0%
GACTAGACATTTAACATGTC+AGG - chr1_3:55870542-55870561 None:intergenic 35.0%
GAATTTCCATGGAGCAAAAA+TGG - chr1_3:55870564-55870583 None:intergenic 35.0%
AGCTAATTCATAACTTTGGC+AGG + chr1_3:55870821-55870840 Msa0126770:intron 35.0%
ATGCAAATGTGAAGACATTG+TGG + chr1_3:55870907-55870926 Msa0126770:CDS 35.0%
TGCAAATGTGAAGACATTGT+GGG + chr1_3:55870908-55870927 Msa0126770:CDS 35.0%
TTCATCCTCATTATGTCATG+AGG + chr1_3:55870940-55870959 Msa0126770:CDS 35.0%
ATCCACTTAAACTCTGAGTT+TGG + chr1_3:55870990-55871009 Msa0126770:CDS 35.0%
TCCACTTAAACTCTGAGTTT+GGG + chr1_3:55870991-55871010 Msa0126770:CDS 35.0%
AAAAGGAGTGGATGATTGAT+AGG - chr1_3:55871040-55871059 None:intergenic 35.0%
AGCTGCAATTAGTAAACAGA+TGG - chr1_3:55871082-55871101 None:intergenic 35.0%
!!! TTTTGGCTTTGTGAAGTTCT+TGG - chr1_3:55871161-55871180 None:intergenic 35.0%
CACAAAGCCAAAACTACAAA+CGG + chr1_3:55871168-55871187 Msa0126770:CDS 35.0%
! AGAAACACCGTTTGTAGTTT+TGG - chr1_3:55871178-55871197 None:intergenic 35.0%
!! TATGACAATCGCTGTTTTGA+AGG + chr1_3:55871213-55871232 Msa0126770:CDS 35.0%
AGCAAAAATTGAAGTTACCC+TGG - chr1_3:55871394-55871413 None:intergenic 35.0%
! ATTTGAATTTTGCCAGCTTC+AGG - chr1_3:55871443-55871462 None:intergenic 35.0%
GAGCAATACAGCATTATTTG+TGG + chr1_3:55871484-55871503 Msa0126770:CDS 35.0%
ATGACAATCACAACGCAAAT+TGG - chr1_3:55871680-55871699 None:intergenic 35.0%
!! TTCGGAAATTTTAGTGCTGT+CGG + chr1_3:55871718-55871737 Msa0126770:intron 35.0%
GAACTATGATCTCCATCTAA+AGG + chr1_3:55871850-55871869 Msa0126770:intron 35.0%
TGTCATCGCTTTATACTTAC+AGG - chr1_3:55872086-55872105 None:intergenic 35.0%
TGCATGAAATTTATCAGCTG+AGG + chr1_3:55872188-55872207 Msa0126770:intron 35.0%
GCAACAGTTATAGGTTTATC+AGG - chr1_3:55872228-55872247 None:intergenic 35.0%
GAATTGGCATTGTTGAAGAA+TGG + chr1_3:55872640-55872659 Msa0126770:three_prime_UTR 35.0%
TGCAACAAATATCAAGTCCA+TGG + chr1_3:55872691-55872710 Msa0126770:three_prime_UTR 35.0%
!!! TACTTTTTTCCTGTTGAGCA+TGG + chr1_3:55872794-55872813 Msa0126770:three_prime_UTR 35.0%
ATTCCAGCAACTAAGATCTT+AGG + chr1_3:55872818-55872837 Msa0126770:three_prime_UTR 35.0%
TTCCAGCAACTAAGATCTTA+GGG + chr1_3:55872819-55872838 Msa0126770:three_prime_UTR 35.0%
CCATTGACGTGATGAGATTT+GGG - chr1_3:55862365-55862384 None:intergenic 40.0%
CCTAGATCAAATGCACTAGA+AGG - chr1_3:55862651-55862670 None:intergenic 40.0%
CCTTCTAGTGCATTTGATCT+AGG + chr1_3:55862648-55862667 Msa0126770:CDS 40.0%
!! TTTGATCTAGGAGCATTCGT+TGG + chr1_3:55862660-55862679 Msa0126770:CDS 40.0%
CCCGTTTAGATCTTCTTCAA+TGG - chr1_3:55862694-55862713 None:intergenic 40.0%
! ATCGTTAGATGGACTTCAAC+AGG + chr1_3:55862837-55862856 Msa0126770:CDS 40.0%
TGTGCGCGATTCTTAAGAAA+AGG + chr1_3:55863030-55863049 Msa0126770:intron 40.0%
CACTTATAATGAGATGAGGG+AGG + chr1_3:55863359-55863378 Msa0126770:intron 40.0%
AGAAACAAAACCGACAAGCA+AGG - chr1_3:55863457-55863476 None:intergenic 40.0%
! TGAGAATGATTTGCGCAAAG+TGG + chr1_3:55863837-55863856 Msa0126770:CDS 40.0%
AGTGGAGTTGGATTCAATTC+AGG + chr1_3:55863855-55863874 Msa0126770:CDS 40.0%
GTAGCGATGATCTTACATGT+AGG + chr1_3:55863975-55863994 Msa0126770:intron 40.0%
! ACAACTCTGCCATTTATTGC+AGG + chr1_3:55864045-55864064 Msa0126770:intron 40.0%
CATATGGAAACTCTGCTAAG+TGG + chr1_3:55864139-55864158 Msa0126770:CDS 40.0%
! AACTCTGCTAAGTGGATTTC+AGG + chr1_3:55864147-55864166 Msa0126770:CDS 40.0%
ATCTGTCTTGTCCGAAAATC+AGG - chr1_3:55864302-55864321 None:intergenic 40.0%
AGACACTTCATTGTTGCAAG+GGG - chr1_3:55864435-55864454 None:intergenic 40.0%
GTGTCTATTTACCACCTTTG+AGG + chr1_3:55864449-55864468 Msa0126770:intron 40.0%
TACTAACAGATCCTCAAAGG+TGG - chr1_3:55864463-55864482 None:intergenic 40.0%
GCAAGAGAAGTCTATGGATA+TGG + chr1_3:55864649-55864668 Msa0126770:CDS 40.0%
AGTCTATGGATATGGGTTTG+AGG + chr1_3:55864657-55864676 Msa0126770:CDS 40.0%
! TTTGAGGCTTAAGAATCGCA+AGG + chr1_3:55864673-55864692 Msa0126770:CDS 40.0%
CATTATTATCCCTCCGAGAA+TGG + chr1_3:55865033-55865052 Msa0126770:CDS 40.0%
GTCCCTAAGTCCTGAATTTA+AGG + chr1_3:55865282-55865301 Msa0126770:intron 40.0%
! TTTGAAACAAGGGTCTGATC+TGG + chr1_3:55865350-55865369 Msa0126770:intron 40.0%
TGTAAACTAGTGTCTTGGCT+TGG + chr1_3:55865528-55865547 Msa0126770:intron 40.0%
GTAAACTAGTGTCTTGGCTT+GGG + chr1_3:55865529-55865548 Msa0126770:intron 40.0%
!! TAAAAGGAGTCTAGCTCTTC+TGG + chr1_3:55865568-55865587 Msa0126770:intron 40.0%
! TGTCTCTTCTTGGTCTTCTT+TGG + chr1_3:55865689-55865708 Msa0126770:intron 40.0%
! GTTGACATGCTTTTACATCG+AGG + chr1_3:55865726-55865745 Msa0126770:intron 40.0%
CAGCATGCATGTCAAGTATT+GGG - chr1_3:55865779-55865798 None:intergenic 40.0%
! TCTCACTTTGGATGCTTTTC+AGG + chr1_3:55865850-55865869 Msa0126770:intron 40.0%
GTTTGTAGAAGTGGACACAA+TGG + chr1_3:55865922-55865941 Msa0126770:CDS 40.0%
TGAAGTCAAATACCTGCAGA+TGG - chr1_3:55866145-55866164 None:intergenic 40.0%
AACTCAACACCAGCAAACAT+GGG - chr1_3:55866363-55866382 None:intergenic 40.0%
AAACTCAACACCAGCAAACA+TGG - chr1_3:55866364-55866383 None:intergenic 40.0%
GCTAACAAGAGAACTAGTGA+AGG + chr1_3:55866646-55866665 Msa0126770:intron 40.0%
! TAACGCAAGGAGGTATACAA+TGG - chr1_3:55866684-55866703 None:intergenic 40.0%
!!! GGGAAATGCATTTTTAGTGG+GGG - chr1_3:55867194-55867213 None:intergenic 40.0%
!!! GGGGAAATGCATTTTTAGTG+GGG - chr1_3:55867195-55867214 None:intergenic 40.0%
!!! GGGGGAAATGCATTTTTAGT+GGG - chr1_3:55867196-55867215 None:intergenic 40.0%
TCGCTATAAACTTCACTTCG+GGG - chr1_3:55867215-55867234 None:intergenic 40.0%
CTCGCTATAAACTTCACTTC+GGG - chr1_3:55867216-55867235 None:intergenic 40.0%
CCTCGCTATAAACTTCACTT+CGG - chr1_3:55867217-55867236 None:intergenic 40.0%
AGTTTATAGCGAGGTGTGAA+TGG + chr1_3:55867223-55867242 Msa0126770:intron 40.0%
ACGGTTAATGATGAACCACA+TGG + chr1_3:55867319-55867338 Msa0126770:intron 40.0%
! TGCACATATAGAGGAGCATA+AGG - chr1_3:55867521-55867540 None:intergenic 40.0%
TTATGCTCCTCTATATGTGC+AGG + chr1_3:55867520-55867539 Msa0126770:intron 40.0%
CTAAGAACCTGCACATATAG+AGG - chr1_3:55867530-55867549 None:intergenic 40.0%
CCAATGCTTGTATGTAAGCA+CGG - chr1_3:55867562-55867581 None:intergenic 40.0%
! AGCATTGGAGAAACTGCAAT+TGG + chr1_3:55867574-55867593 Msa0126770:CDS 40.0%
! ACAGCAGATCGATTCTTTAG+CGG - chr1_3:55867674-55867693 None:intergenic 40.0%
!!! GATCTGCTGTTTTTGCTCTT+GGG + chr1_3:55867684-55867703 Msa0126770:CDS 40.0%
!!! ATCTGCTGTTTTTGCTCTTG+GGG + chr1_3:55867685-55867704 Msa0126770:CDS 40.0%
! TTGAAGGTATGACTCAACCT+AGG + chr1_3:55867722-55867741 Msa0126770:intron 40.0%
! AGTGAAGGTTAGTCAAGACT+AGG + chr1_3:55867852-55867871 Msa0126770:intron 40.0%
GAATTATATTTCCTGCCCCT+AGG + chr1_3:55867917-55867936 Msa0126770:intron 40.0%
!! AAGGGCATCTCTTTCTTTAG+AGG - chr1_3:55868103-55868122 None:intergenic 40.0%
AAGAAAGAGATGCCCTTTAG+AGG + chr1_3:55868106-55868125 Msa0126770:intron 40.0%
TGCAGAGATTGTGTAGTCAT+TGG + chr1_3:55868333-55868352 Msa0126770:intron 40.0%
GCAGAGATTGTGTAGTCATT+GGG + chr1_3:55868334-55868353 Msa0126770:intron 40.0%
GCTATATGAGGAATCAATGC+CGG - chr1_3:55868402-55868421 None:intergenic 40.0%
CTCCTGAACAGAACTTCATA+TGG - chr1_3:55868447-55868466 None:intergenic 40.0%
TATTAAGTGCCATAGCAAGC+TGG - chr1_3:55868513-55868532 None:intergenic 40.0%
! CTAGGGTTTTTATGCACAGA+AGG - chr1_3:55868550-55868569 None:intergenic 40.0%
GCCAACATGGGAACAAAAAA+TGG + chr1_3:55868815-55868834 Msa0126770:intron 40.0%
!! ACTCTTAAAGAGTGCCCTTA+GGG - chr1_3:55869008-55869027 None:intergenic 40.0%
!! AACTCTTAAAGAGTGCCCTT+AGG - chr1_3:55869009-55869028 None:intergenic 40.0%
CCTATAGCATCATAGCAGTT+TGG - chr1_3:55869351-55869370 None:intergenic 40.0%
CCAAACTGCTATGATGCTAT+AGG + chr1_3:55869348-55869367 Msa0126770:CDS 40.0%
GGTTTCAGTCTTCAGTAAGA+AGG + chr1_3:55869431-55869450 Msa0126770:intron 40.0%
ATACTATTGCGGCCTAAAGA+AGG + chr1_3:55869481-55869500 Msa0126770:intron 40.0%
TCATTGGAATTTCAAGAGGG+TGG - chr1_3:55869569-55869588 None:intergenic 40.0%
!!! AAAACTGACCCGTTGGTTTT+GGG + chr1_3:55869588-55869607 Msa0126770:intron 40.0%
GTTTGTATCCCAAAACCAAC+GGG - chr1_3:55869599-55869618 None:intergenic 40.0%
GGTTTGTATCCCAAAACCAA+CGG - chr1_3:55869600-55869619 None:intergenic 40.0%
CTTGACAGTGTGTTTATTGC+TGG + chr1_3:55869927-55869946 Msa0126770:intron 40.0%
AGTAGCCCTACAATTCTTGT+AGG + chr1_3:55869996-55870015 Msa0126770:intron 40.0%
GTAGCCCTACAATTCTTGTA+GGG + chr1_3:55869997-55870016 Msa0126770:intron 40.0%
CAGAACCCTACAAGAATTGT+AGG - chr1_3:55870005-55870024 None:intergenic 40.0%
GAACTATTTGACTGCTTAGC+TGG + chr1_3:55870070-55870089 Msa0126770:intron 40.0%
GTGAATAAGCATCTGCTACT+CGG + chr1_3:55870300-55870319 Msa0126770:intron 40.0%
AATGAAACCCGTAATGAGGA+AGG - chr1_3:55870412-55870431 None:intergenic 40.0%
TTTATGAGAACATTGGCGAG+GGG + chr1_3:55870460-55870479 Msa0126770:intron 40.0%
!! TCTAGTCCATTTTTGCTCCA+TGG + chr1_3:55870555-55870574 Msa0126770:intron 40.0%
GGGAAAACGTTGAATTTCCA+TGG - chr1_3:55870575-55870594 None:intergenic 40.0%
ACTTCTATAGGTAGAACGGA+GGG - chr1_3:55870595-55870614 None:intergenic 40.0%
! CCATCTAGAAAGTCTTGTCT+AGG - chr1_3:55870643-55870662 None:intergenic 40.0%
CCTAGACAAGACTTTCTAGA+TGG + chr1_3:55870640-55870659 Msa0126770:intron 40.0%
AGACAAGACTTTCTAGATGG+CGG + chr1_3:55870643-55870662 Msa0126770:intron 40.0%
TCAATATTTCCCTATGGCCT+CGG + chr1_3:55870844-55870863 Msa0126770:CDS 40.0%
TCGAATACCATCTTAAACCG+AGG - chr1_3:55870864-55870883 None:intergenic 40.0%
TTGCATTTCGCAAACTGTTG+AGG - chr1_3:55870893-55870912 None:intergenic 40.0%
TAACGCCTCATGACATAATG+AGG - chr1_3:55870948-55870967 None:intergenic 40.0%
! TTATGTCATGAGGCGTTATG+CGG + chr1_3:55870950-55870969 Msa0126770:CDS 40.0%
CCACTTAAACTCTGAGTTTG+GGG + chr1_3:55870992-55871011 Msa0126770:CDS 40.0%
TTAAACTCTGAGTTTGGGGA+TGG + chr1_3:55870996-55871015 Msa0126770:CDS 40.0%
ATTGCAGCTTGAACTGAATC+TGG + chr1_3:55871093-55871112 Msa0126770:intron 40.0%
! GAATCTGGAACGACTTAGAA+TGG + chr1_3:55871108-55871127 Msa0126770:CDS 40.0%
TCCATTTCAAATTGCTGGTG+TGG + chr1_3:55871319-55871338 Msa0126770:intron 40.0%
ACCACACCAGCAATTTGAAA+TGG - chr1_3:55871323-55871342 None:intergenic 40.0%
GCTTTCAATCCTTTCATACC+TGG + chr1_3:55871512-55871531 Msa0126770:intron 40.0%
GCAACAAAACCAGGTATGAA+AGG - chr1_3:55871524-55871543 None:intergenic 40.0%
CGCTTTATACTTACAGGCTT+TGG - chr1_3:55872080-55872099 None:intergenic 40.0%
GTTTATCAGGACTCGATGTT+GGG - chr1_3:55872215-55872234 None:intergenic 40.0%
! TGGTGAAGGATTTTGCAAGT+AGG + chr1_3:55872262-55872281 Msa0126770:CDS 40.0%
! TGAAGGATTTTGCAAGTAGG+TGG + chr1_3:55872265-55872284 Msa0126770:CDS 40.0%
!!! CAGCAATTTTTTGTGCGGTA+TGG + chr1_3:55872332-55872351 Msa0126770:CDS 40.0%
ATCCCTAAGATCTTAGTTGC+TGG - chr1_3:55872824-55872843 None:intergenic 40.0%
ATGAGATTTGGGAGACACGT+CGG - chr1_3:55862354-55862373 None:intergenic 45.0%
CCCAAATCTCATCACGTCAA+TGG + chr1_3:55862362-55862381 Msa0126770:five_prime_UTR 45.0%
GCCATTGACGTGATGAGATT+TGG - chr1_3:55862366-55862385 None:intergenic 45.0%
TGATGTCGCCTCAAACACAA+TGG + chr1_3:55862514-55862533 Msa0126770:CDS 45.0%
GCACAACTCGTAAGAGACAT+CGG - chr1_3:55863015-55863034 None:intergenic 45.0%
! TTGAGTAGAAGCACACTCCA+AGG - chr1_3:55863239-55863258 None:intergenic 45.0%
TTGGAGTGTGCTTCTACTCA+AGG + chr1_3:55863238-55863257 Msa0126770:intron 45.0%
CAATAGGAGACCTTGCTTGT+CGG + chr1_3:55863444-55863463 Msa0126770:intron 45.0%
AGGCAGGGACAACAAAAAGA+TGG - chr1_3:55863692-55863711 None:intergenic 45.0%
! TGATTTGCGCAAAGTGGAGT+TGG + chr1_3:55863843-55863862 Msa0126770:CDS 45.0%
!! TGGGTGGTTCTGCTTTTGAT+CGG - chr1_3:55864225-55864244 None:intergenic 45.0%
CTAACTAAGAACTGGTTGGG+TGG - chr1_3:55864241-55864260 None:intergenic 45.0%
TTATGGAACCAATCTCAGCC+TGG - chr1_3:55864610-55864629 None:intergenic 45.0%
ACTTAATTCGCTGGGTAGCA+GGG - chr1_3:55864906-55864925 None:intergenic 45.0%
AACTTAATTCGCTGGGTAGC+AGG - chr1_3:55864907-55864926 None:intergenic 45.0%
ATCCAAGCTGGCTAAGTTTG+TGG + chr1_3:55865006-55865025 Msa0126770:CDS 45.0%
TTCCACAAACTTAGCCAGCT+TGG - chr1_3:55865011-55865030 None:intergenic 45.0%
TATTATCCCTCCGAGAATGG+TGG + chr1_3:55865036-55865055 Msa0126770:CDS 45.0%
ACAAGGATGTCCACCATTCT+CGG - chr1_3:55865049-55865068 None:intergenic 45.0%
!! ATGGTGGACATCCTTGTTGA+TGG + chr1_3:55865052-55865071 Msa0126770:CDS 45.0%
!! TCCGGCATTGACTAGAGATA+GGG + chr1_3:55865194-55865213 Msa0126770:intron 45.0%
ATTGACTAGAGATAGGGCCT+AGG + chr1_3:55865200-55865219 Msa0126770:intron 45.0%
GGGCCTAGGTAGTACTTATA+AGG + chr1_3:55865214-55865233 Msa0126770:intron 45.0%
! TACATTTTTGCCAGCTGTCC+AGG + chr1_3:55865326-55865345 Msa0126770:intron 45.0%
!! CTGTCCAGGCTTTGAAACAA+GGG + chr1_3:55865340-55865359 Msa0126770:intron 45.0%
!! GCTGGTTTGATGTCTCTTCT+TGG + chr1_3:55865679-55865698 Msa0126770:intron 45.0%
!! CATGCATGTCAAGTATTGGG+TGG - chr1_3:55865776-55865795 None:intergenic 45.0%
GCAGCATGCATGTCAAGTAT+TGG - chr1_3:55865780-55865799 None:intergenic 45.0%
!!! GGATGCTTTTCAGGTCAATG+AGG + chr1_3:55865859-55865878 Msa0126770:intron 45.0%
TCTGTTATCCATCCATCTGC+AGG + chr1_3:55866130-55866149 Msa0126770:intron 45.0%
GTCAAATACCTGCAGATGGA+TGG - chr1_3:55866141-55866160 None:intergenic 45.0%
GCTAGAGGGACCTTATCAAT+AGG - chr1_3:55866313-55866332 None:intergenic 45.0%
TAAAGGTGGTTAACGCAAGG+AGG - chr1_3:55866694-55866713 None:intergenic 45.0%
!! CGGGGGAAATGCATTTTTAG+TGG - chr1_3:55867197-55867216 None:intergenic 45.0%
CGCTATAAACTTCACTTCGG+GGG - chr1_3:55867214-55867233 None:intergenic 45.0%
CCGAAGTGAAGTTTATAGCG+AGG + chr1_3:55867214-55867233 Msa0126770:intron 45.0%
CCGTGCTTACATACAAGCAT+TGG + chr1_3:55867559-55867578 Msa0126770:CDS 45.0%
!!! CGATCTGCTGTTTTTGCTCT+TGG + chr1_3:55867683-55867702 Msa0126770:CDS 45.0%
!!! CTGTTTTTGCTCTTGGGGAT+AGG + chr1_3:55867690-55867709 Msa0126770:CDS 45.0%
AAACCAGCAACAGATCCCTA+GGG - chr1_3:55867936-55867955 None:intergenic 45.0%
TAAACCAGCAACAGATCCCT+AGG - chr1_3:55867937-55867956 None:intergenic 45.0%
!! GCACTTAAGGGCACTCTTTA+AGG - chr1_3:55869131-55869150 None:intergenic 45.0%
!!! TACAGGTCCTTTTGGTGTCA+TGG + chr1_3:55869302-55869321 Msa0126770:intron 45.0%
TGCTCATCCATGACACCAAA+AGG - chr1_3:55869312-55869331 None:intergenic 45.0%
TCGCATAATACACCAGCATC+AGG + chr1_3:55869386-55869405 Msa0126770:CDS 45.0%
GTCAGAATGTTACCTGATGC+TGG - chr1_3:55869401-55869420 None:intergenic 45.0%
AGGCCGCAATAGTATCAATG+TGG - chr1_3:55869476-55869495 None:intergenic 45.0%
TCCAATGAAAACTGACCCGT+TGG + chr1_3:55869581-55869600 Msa0126770:intron 45.0%
! ACCAACGGGTCAGTTTTCAT+TGG - chr1_3:55869585-55869604 None:intergenic 45.0%
!!! GAAAACTGACCCGTTGGTTT+TGG + chr1_3:55869587-55869606 Msa0126770:intron 45.0%
TTCAGCTCATTATGTCTCGG+AGG + chr1_3:55869825-55869844 Msa0126770:intron 45.0%
TTTAGACAAGGTCAGCTTCC+TGG + chr1_3:55869871-55869890 Msa0126770:intron 45.0%
TTAGACAAGGTCAGCTTCCT+GGG + chr1_3:55869872-55869891 Msa0126770:intron 45.0%
! TTTGGGTTCCTGCAGCTATA+CGG - chr1_3:55870344-55870363 None:intergenic 45.0%
TAATGAGGAAGGAGAGGGAA+CGG - chr1_3:55870401-55870420 None:intergenic 45.0%
TTCCCTCTCCTTCCTCATTA+CGG + chr1_3:55870401-55870420 Msa0126770:intron 45.0%
TGATGGCAAGAAGGACTCAA+GGG - chr1_3:55870516-55870535 None:intergenic 45.0%
! TTGATGGCAAGAAGGACTCA+AGG - chr1_3:55870517-55870536 None:intergenic 45.0%
GACTTCTATAGGTAGAACGG+AGG - chr1_3:55870596-55870615 None:intergenic 45.0%
GACAAGACTTTCTAGATGGC+GGG + chr1_3:55870644-55870663 Msa0126770:intron 45.0%
TGACAAAACTTCAGACACCC+AGG - chr1_3:55870680-55870699 None:intergenic 45.0%
GGCAGGTCAATATTTCCCTA+TGG + chr1_3:55870838-55870857 Msa0126770:intron 45.0%
CATCTTAAACCGAGGCCATA+GGG - chr1_3:55870856-55870875 None:intergenic 45.0%
CCCCAAACTCAGAGTTTAAG+TGG - chr1_3:55870995-55871014 None:intergenic 45.0%
GAAGGTAAGAATCTGCAAGC+TGG + chr1_3:55871231-55871250 Msa0126770:intron 45.0%
TTGGAGAAGTTCTTCCTGCA+AGG - chr1_3:55872023-55872042 None:intergenic 45.0%
GGTTTATCAGGACTCGATGT+TGG - chr1_3:55872216-55872235 None:intergenic 45.0%
ACCTATAACTGTTGCGGAAG+TGG + chr1_3:55872233-55872252 Msa0126770:CDS 45.0%
TCCACTTCCGCAACAGTTAT+AGG - chr1_3:55872237-55872256 None:intergenic 45.0%
CTTGCAAAATCCTTCACCAG+TGG - chr1_3:55872261-55872280 None:intergenic 45.0%
! GGATTTTGCAAGTAGGTGGA+AGG + chr1_3:55872269-55872288 Msa0126770:CDS 45.0%
! TTTTGCAAGTAGGTGGAAGG+CGG + chr1_3:55872272-55872291 Msa0126770:CDS 45.0%
GACTCTCTGATTCCATCAAG+AGG + chr1_3:55872400-55872419 Msa0126770:CDS 45.0%
!! AAAAAAAAAAAAAAATTCAT+TGG + chr1_3:55863286-55863305 Msa0126770:intron 5.0%
TGGACTTCAACAGGAGCTTG+AGG + chr1_3:55862846-55862865 Msa0126770:CDS 50.0%
!! TTAACCCACTTGGGTTGACC+TGG + chr1_3:55863197-55863216 Msa0126770:intron 50.0%
CTTAATTCGCTGGGTAGCAG+GGG - chr1_3:55864905-55864924 None:intergenic 50.0%
ATAGGTGGCTGAATCCAAGC+TGG + chr1_3:55864994-55865013 Msa0126770:intron 50.0%
! GGACATCCTTGTTGATGGAG+AGG + chr1_3:55865057-55865076 Msa0126770:CDS 50.0%
!! GTCCGGCATTGACTAGAGAT+AGG + chr1_3:55865193-55865212 Msa0126770:intron 50.0%
GCCCTATCTCTAGTCAATGC+CGG - chr1_3:55865198-55865217 None:intergenic 50.0%
TGTTTCAAAGCCTGGACAGC+TGG - chr1_3:55865339-55865358 None:intergenic 50.0%
!! GCTGTCCAGGCTTTGAAACA+AGG + chr1_3:55865339-55865358 Msa0126770:intron 50.0%
! CAGACCCTTGTTTCAAAGCC+TGG - chr1_3:55865347-55865366 None:intergenic 50.0%
AACCCGAGCTTGAAAAGCTC+AGG + chr1_3:55865975-55865994 Msa0126770:CDS 50.0%
!! TGCCTGAGCTTTTCAAGCTC+GGG - chr1_3:55865980-55865999 None:intergenic 50.0%
!! CTGCCTGAGCTTTTCAAGCT+CGG - chr1_3:55865981-55866000 None:intergenic 50.0%
CAGGCAGAAAGCAGTCTCAA+AGG + chr1_3:55865994-55866013 Msa0126770:CDS 50.0%
GACAACATGCCCATGTTTGC+TGG + chr1_3:55866351-55866370 Msa0126770:intron 50.0%
TATGTATGAGCTGAGTGGGC+TGG + chr1_3:55867364-55867383 Msa0126770:intron 50.0%
! ATGTATGAGCTGAGTGGGCT+GGG + chr1_3:55867365-55867384 Msa0126770:intron 50.0%
! GCGGTCTTTTTGCAACAGCA+TGG + chr1_3:55867645-55867664 Msa0126770:CDS 50.0%
AACCAGCAACAGATCCCTAG+GGG - chr1_3:55867935-55867954 None:intergenic 50.0%
! GAGCTGGCTTCAGCTATATG+AGG - chr1_3:55868414-55868433 None:intergenic 50.0%
GAGCTTGCAGAAGCTGCTTA+TGG + chr1_3:55868464-55868483 Msa0126770:CDS 50.0%
!! GAGTACACTCCAGCTTGCTA+TGG + chr1_3:55868501-55868520 Msa0126770:intron 50.0%
AGTGCCCTTAAGTGCCCTAA+GGG + chr1_3:55869136-55869155 Msa0126770:intron 50.0%
! AGTGCCCTTAGGGCACTTAA+GGG - chr1_3:55869143-55869162 None:intergenic 50.0%
CTTGCTAACGAGTGCCCTTA+GGG - chr1_3:55869153-55869172 None:intergenic 50.0%
TCTTGCTAACGAGTGCCCTT+AGG - chr1_3:55869154-55869173 None:intergenic 50.0%
AGCTCATTATGTCTCGGAGG+CGG + chr1_3:55869828-55869847 Msa0126770:intron 50.0%
TTAAGCAGAACGCATTGCCC+AGG - chr1_3:55869892-55869911 None:intergenic 50.0%
TTCTTCACCTAGCTCCTAGC+TGG - chr1_3:55870246-55870265 None:intergenic 50.0%
! GATTAGCTCCGTATAGCTGC+AGG + chr1_3:55870333-55870352 Msa0126770:intron 50.0%
TCCCTCTCCTTCCTCATTAC+GGG + chr1_3:55870402-55870421 Msa0126770:intron 50.0%
ACCCGTAATGAGGAAGGAGA+GGG - chr1_3:55870406-55870425 None:intergenic 50.0%
AACCCGTAATGAGGAAGGAG+AGG - chr1_3:55870407-55870426 None:intergenic 50.0%
!! GTCAGGTGTTGATGGCAAGA+AGG - chr1_3:55870525-55870544 None:intergenic 50.0%
CCATCTTAAACCGAGGCCAT+AGG - chr1_3:55870857-55870876 None:intergenic 50.0%
CCTATGGCCTCGGTTTAAGA+TGG + chr1_3:55870854-55870873 Msa0126770:CDS 50.0%
TTGCTCGCATGCTTGATTCC+AGG + chr1_3:55871409-55871428 Msa0126770:intron 50.0%
CATGCTTGATTCCAGGAAGC+AGG + chr1_3:55871416-55871435 Msa0126770:intron 50.0%
GATTCCATCAAGAGGATCCC+TGG + chr1_3:55872408-55872427 Msa0126770:CDS 50.0%
TGTTCAATGCAGACCCACCA+GGG - chr1_3:55872428-55872447 None:intergenic 50.0%
TTGTTCAATGCAGACCCACC+AGG - chr1_3:55872429-55872448 None:intergenic 50.0%
! TGGTGGGTCTGCATTGAACA+AGG + chr1_3:55872428-55872447 Msa0126770:CDS 50.0%
ACCACCAGGTCAACCCAAGT+GGG - chr1_3:55863204-55863223 None:intergenic 55.0%
!! TTGGGTTGACCTGGTGGTGT+TGG + chr1_3:55863206-55863225 Msa0126770:intron 55.0%
!! TTGACCTGGTGGTGTTGGCT+TGG + chr1_3:55863211-55863230 Msa0126770:intron 55.0%
!! TGACCTGGTGGTGTTGGCTT+GGG + chr1_3:55863212-55863231 Msa0126770:intron 55.0%
GGATGTCCACCATTCTCGGA+GGG - chr1_3:55865045-55865064 None:intergenic 55.0%
AGGATGTCCACCATTCTCGG+AGG - chr1_3:55865046-55865065 None:intergenic 55.0%
!! TTGCAGTGCCGGTGTTGAGA+AGG + chr1_3:55865445-55865464 Msa0126770:intron 55.0%
GCTGCAGACCTTCTCAACAC+CGG - chr1_3:55865456-55865475 None:intergenic 55.0%
GAGTGCCCTTAAGTGCCCTA+AGG + chr1_3:55869135-55869154 Msa0126770:intron 55.0%
! GAGTGCCCTTAGGGCACTTA+AGG - chr1_3:55869144-55869163 None:intergenic 55.0%
GCTAGCTGCTCCCAATCTTG+AGG - chr1_3:55870194-55870213 None:intergenic 55.0%
CTAGCTCCTAGCTGGTTGCA+GGG - chr1_3:55870238-55870257 None:intergenic 55.0%
!! TCTAGATGGCGGGACTCTCT+TGG + chr1_3:55870654-55870673 Msa0126770:intron 55.0%
CTCTGAGTTTGGGGATGGTC+AGG + chr1_3:55871001-55871020 Msa0126770:CDS 55.0%
TGCTGTCGGTCCTGATCTGA+AGG + chr1_3:55871732-55871751 Msa0126770:intron 55.0%
TCCATCAAGAGGATCCCTGG+TGG + chr1_3:55872411-55872430 Msa0126770:CDS 55.0%
CCATCAAGAGGATCCCTGGT+GGG + chr1_3:55872412-55872431 Msa0126770:CDS 55.0%
GCTGGAATGCCATGCTCAAC+AGG - chr1_3:55872806-55872825 None:intergenic 55.0%
!! ACCCACTTGGGTTGACCTGG+TGG + chr1_3:55863200-55863219 Msa0126770:intron 60.0%
CACCACCAGGTCAACCCAAG+TGG - chr1_3:55863205-55863224 None:intergenic 60.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr1_3:55863219-55863238 Msa0126770:intron 60.0%
AGCAACAGATCCCTAGGGGC+AGG - chr1_3:55867931-55867950 None:intergenic 60.0%
TGCCCCTAGGGATCTGTTGC+TGG + chr1_3:55867930-55867949 Msa0126770:intron 60.0%
! TCGGAGGCGGATTCCATGCT+TGG + chr1_3:55869841-55869860 Msa0126770:CDS 60.0%
TCTCGACCCTGCAACCAGCT+AGG + chr1_3:55870229-55870248 Msa0126770:intron 60.0%
CCTAGCTCCTAGCTGGTTGC+AGG - chr1_3:55870239-55870258 None:intergenic 60.0%
CCTGCAACCAGCTAGGAGCT+AGG + chr1_3:55870236-55870255 Msa0126770:intron 60.0%
CAGCTTCAGGACCTGCTTCC+TGG - chr1_3:55871430-55871449 None:intergenic 60.0%
CAGGAAGCAGGTCCTGAAGC+TGG + chr1_3:55871428-55871447 Msa0126770:intron 60.0%
TGTTGCGGAAGTGGAGCCAC+TGG + chr1_3:55872242-55872261 Msa0126770:CDS 60.0%
GGAAGTGGAGCCACTGGTGA+AGG + chr1_3:55872248-55872267 Msa0126770:CDS 60.0%
CCCACCAGGGATCCTCTTGA+TGG - chr1_3:55872415-55872434 None:intergenic 60.0%
GGTCCCAAGCCAACACCACC+AGG - chr1_3:55863218-55863237 None:intergenic 65.0%
! ATGGCGGGACTCTCTTGGCC+TGG + chr1_3:55870659-55870678 Msa0126770:intron 65.0%
TGGCGGGACTCTCTTGGCCT+GGG + chr1_3:55870660-55870679 Msa0126770:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 55862335 55872920 55862335 ID=Msa0126770;Name=Msa0126770
chr1_3 mRNA 55862335 55872920 55862335 ID=Msa0126770-mRNA-1;Parent=Msa0126770;Name=Msa0126770-mRNA-1;_AED=0.05;_eAED=0.05;_QI=174|1|1|1|1|1|20|411|699
chr1_3 exon 55862335 55862535 55862335 ID=Msa0126770-mRNA-1:exon:17429;Parent=Msa0126770-mRNA-1
chr1_3 exon 55862645 55862712 55862645 ID=Msa0126770-mRNA-1:exon:17430;Parent=Msa0126770-mRNA-1
chr1_3 exon 55862828 55862885 55862828 ID=Msa0126770-mRNA-1:exon:17431;Parent=Msa0126770-mRNA-1
chr1_3 exon 55863781 55863876 55863781 ID=Msa0126770-mRNA-1:exon:17432;Parent=Msa0126770-mRNA-1
chr1_3 exon 55864067 55864168 55864067 ID=Msa0126770-mRNA-1:exon:17433;Parent=Msa0126770-mRNA-1
chr1_3 exon 55864611 55864694 55864611 ID=Msa0126770-mRNA-1:exon:17434;Parent=Msa0126770-mRNA-1
chr1_3 exon 55864998 55865078 55864998 ID=Msa0126770-mRNA-1:exon:17435;Parent=Msa0126770-mRNA-1
chr1_3 exon 55865872 55866015 55865872 ID=Msa0126770-mRNA-1:exon:17436;Parent=Msa0126770-mRNA-1
chr1_3 exon 55866152 55866243 55866152 ID=Msa0126770-mRNA-1:exon:17437;Parent=Msa0126770-mRNA-1
chr1_3 exon 55866791 55866872 55866791 ID=Msa0126770-mRNA-1:exon:17438;Parent=Msa0126770-mRNA-1
chr1_3 exon 55867542 55867727 55867542 ID=Msa0126770-mRNA-1:exon:17439;Parent=Msa0126770-mRNA-1
chr1_3 exon 55868387 55868502 55868387 ID=Msa0126770-mRNA-1:exon:17440;Parent=Msa0126770-mRNA-1
chr1_3 exon 55868607 55868665 55868607 ID=Msa0126770-mRNA-1:exon:17441;Parent=Msa0126770-mRNA-1
chr1_3 exon 55869307 55869407 55869307 ID=Msa0126770-mRNA-1:exon:17442;Parent=Msa0126770-mRNA-1
chr1_3 exon 55869830 55869880 55869830 ID=Msa0126770-mRNA-1:exon:17443;Parent=Msa0126770-mRNA-1
chr1_3 exon 55870843 55871022 55870843 ID=Msa0126770-mRNA-1:exon:17444;Parent=Msa0126770-mRNA-1
chr1_3 exon 55871100 55871234 55871100 ID=Msa0126770-mRNA-1:exon:17445;Parent=Msa0126770-mRNA-1
chr1_3 exon 55871431 55871505 55871431 ID=Msa0126770-mRNA-1:exon:17446;Parent=Msa0126770-mRNA-1
chr1_3 exon 55872028 55872085 55872028 ID=Msa0126770-mRNA-1:exon:17447;Parent=Msa0126770-mRNA-1
chr1_3 exon 55872205 55872920 55872205 ID=Msa0126770-mRNA-1:exon:17448;Parent=Msa0126770-mRNA-1
chr1_3 five_prime_UTR 55862335 55862508 55862335 ID=Msa0126770-mRNA-1:five_prime_utr;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55862509 55862535 55862509 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55862645 55862712 55862645 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55862828 55862885 55862828 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55863781 55863876 55863781 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55864067 55864168 55864067 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55864611 55864694 55864611 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55864998 55865078 55864998 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55865872 55866015 55865872 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55866152 55866243 55866152 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55866791 55866872 55866791 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55867542 55867727 55867542 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55868387 55868502 55868387 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55868607 55868665 55868607 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55869307 55869407 55869307 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55869830 55869880 55869830 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55870843 55871022 55870843 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55871100 55871234 55871100 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55871431 55871505 55871431 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55872028 55872085 55872028 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 CDS 55872205 55872509 55872205 ID=Msa0126770-mRNA-1:cds;Parent=Msa0126770-mRNA-1
chr1_3 three_prime_UTR 55872510 55872920 55872510 ID=Msa0126770-mRNA-1:three_prime_utr;Parent=Msa0126770-mRNA-1
Gene Sequence

>Msa0126770

ATGGCTGATGTCGCCTCAAACACAATGAGTCCTTCTAGTGCATTTGATCTAGGAGCATTCGTTGGTGATTTAACCATTGAAGAAGATCTAAACGGTGATGATATATCGTTAGATGGACTTCAACAGGAGCTTGAGGAATGTAAGAATGATGAAGTTGTTGCAAATATACTATCTAAAGGTCCAAAACTTAGAGATTATACTAAGGGAGTTGAGAATGATTTGCGCAAAGTGGAGTTGGATTCAATTCAGGATTATATTAAAGAGAGTGATAATTTAGTCTCTCTTCATGACCAAATTCATGATTGTGATAATATCTTGTCACATATGGAAACTCTGCTAAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATTAAAATTCTGCAAGAGAAGTCTATGGATATGGGTTTGAGGCTTAAGAATCGCAAGGTGGCTGAATCCAAGCTGGCTAAGTTTGTGGAAGACATTATTATCCCTCCGAGAATGGTGGACATCCTTGTTGATGGAGAGGTCAATGAGGAATACATGAGAACTCTTGAGATTCTAAGTAAGAAACTGAAGTTTGTAGAAGTGGACACAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCCGAGCTTGAAAAGCTCAGGCAGAAAGCAGTCTCAAAGGTATTTGACTTCATTGTTCAGAAACTATATGCATTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTATGTTGTTAACTTTCTCAAGGAACATGGCAAAGAAGTATATAATGAAGTTCGTGCAGCTTATATTGATACAATGAACAAGGTTCTTAGTGCTCATTTCCGTGCTTACATACAAGCATTGGAGAAACTGCAATTGGATATAGCAACATCCTATGATTTAATTGGTGTAGAGACAAGAAGCAACAGCGGTCTTTTTGCAACAGCATGGCAACCGCTAAAGAATCGATCTGCTGTTTTTGCTCTTGGGGATAGGATTAATATATTGAAGGAAATTGATGAACCGGCATTGATTCCTCATATAGCTGAAGCCAGCTCTATTAAATATCCATATGAAGTTCTGTTCAGGAGCTTGCAGAAGCTGCTTATGGATACTGCTACTTCAGAATATAATTTCTGTGAGGATTTTTATGGGGAACAACATATGTTCTATGAAATTTTTTCAGGTCCTTTTGGTGTCATGGATGAGCATTTCAGTACAATACTTCCAAACTGCTATGATGCTATAGGTCTAATGCTTATGATTCGCATAATACACCAGCATCAGCTCATTATGTCTCGGAGGCGGATTCCATGCTTGGATTCTTATTTAGACAAGGTCAATATTTCCCTATGGCCTCGGTTTAAGATGGTATTCGACATGCACCTCAACAGTTTGCGAAATGCAAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCATTATGTCATGAGGCGTTATGCGGAGTTTACTGCTTCACTTATCCACTTAAACTCTGAGTTTGGGGATGGTCAGCTTGAACTGAATCTGGAACGACTTAGAATGGCCATTGATGATTTACTTATCAAGCTTGCCAAGAACTTCACAAAGCCAAAACTACAAACGGTGTTTCTTATAAACAATTATGATATGACAATCGCTGTTTTGAAGGAAGCAGGTCCTGAAGCTGGCAAAATTCAAATGCACTTTGAGGAACTACTGAAGAGCAATACAGCATTATTTGTGGAAGAACTTCTCCAAGAGCATTTTAATGATTTAATCAAGTTTGTCAAGGCCAAAGCCTCTGAGGACCCAACATCGAGTCCTGATAAACCTATAACTGTTGCGGAAGTGGAGCCACTGGTGAAGGATTTTGCAAGTAGGTGGAAGGCGGCAATAGAGTTGATGCACAAAGATGTCATCACATCTTTCAGCAATTTTTTGTGCGGTATGGAGATCTTAAGAGCTGCATTGACCCAATTGCTACTTTACTATACGAGACTCTCTGATTCCATCAAGAGGATCCCTGGTGGGTCTGCATTGAACAAGGATCTTGTTTCCATATCTTCAATCATGTATGAGATTAGGAAATATTCGAGGACTTTCTAA

Protein sequence

>Msa0126770

MADVASNTMSPSSAFDLGAFVGDLTIEEDLNGDDISLDGLQQELEECKNDEVVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMETLLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALGDRINILKEIDEPALIPHIAEASSIKYPYEVLFRSLQKLLMDTATSEYNFCEDFYGEQHMFYEIFSGPFGVMDEHFSTILPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLIHLNSEFGDGQLELNLERLRMAIDDLLIKLAKNFTKPKLQTVFLINNYDMTIAVLKEAGPEAGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEIRKYSRTF*