Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699780 | XP_039685191.1 | 96.005 | 801 | 26 | 2 | 1 | 795 | 1 | 801 | 0.0 | 1591 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699780 | sp|Q94B71|OBE3_ARATH | 51.585 | 820 | 285 | 26 | 1 | 795 | 1 | 733 | 0.0 | 701 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699780 | A0A396GUR3 | 96.005 | 801 | 26 | 2 | 1 | 795 | 1 | 801 | 0.0 | 1591 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003270 | Msa0699780 | 0.821677 | 3.554980e-53 | -8.615850e-47 |
| Msa0007850 | Msa0699780 | 0.801487 | 8.798531e-49 | -8.615850e-47 |
| Msa0008200 | Msa0699780 | 0.803646 | 3.156976e-49 | -8.615850e-47 |
| Msa0010770 | Msa0699780 | 0.823208 | 1.567928e-53 | -8.615850e-47 |
| Msa0012710 | Msa0699780 | 0.800041 | 1.735787e-48 | -8.615850e-47 |
| Msa0016540 | Msa0699780 | 0.851335 | 9.490579e-61 | -8.615850e-47 |
| Msa0029630 | Msa0699780 | 0.815337 | 9.734493e-52 | -8.615850e-47 |
| Msa0039250 | Msa0699780 | 0.812498 | 4.112548e-51 | -8.615850e-47 |
| Msa0041690 | Msa0699780 | 0.831157 | 1.956933e-55 | -8.615850e-47 |
| Msa0046560 | Msa0699780 | 0.808347 | 3.238269e-50 | -8.615850e-47 |
| Msa0047640 | Msa0699780 | 0.851746 | 7.262453e-61 | -8.615850e-47 |
| Msa0062350 | Msa0699780 | 0.842898 | 1.951917e-58 | -8.615850e-47 |
| Msa0069600 | Msa0699780 | 0.829189 | 5.917353e-55 | -8.615850e-47 |
| Msa0070430 | Msa0699780 | 0.806745 | 7.087292e-50 | -8.615850e-47 |
| Msa0074750 | Msa0699780 | 0.817862 | 2.645425e-52 | -8.615850e-47 |
| Msa0077540 | Msa0699780 | 0.801062 | 1.074697e-48 | -8.615850e-47 |
| Msa0077900 | Msa0699780 | 0.812036 | 5.188195e-51 | -8.615850e-47 |
| Msa0079920 | Msa0699780 | 0.805874 | 1.080975e-49 | -8.615850e-47 |
| Msa0081940 | Msa0699780 | 0.804830 | 1.788968e-49 | -8.615850e-47 |
| Msa0095770 | Msa0699780 | 0.809694 | 1.667529e-50 | -8.615850e-47 |
| Msa0097950 | Msa0699780 | 0.805479 | 1.308467e-49 | -8.615850e-47 |
| Msa0106620 | Msa0699780 | 0.818593 | 1.807915e-52 | -8.615850e-47 |
| Msa0108870 | Msa0699780 | 0.802010 | 6.872844e-49 | -8.615850e-47 |
| Msa0116790 | Msa0699780 | 0.805654 | 1.202355e-49 | -8.615850e-47 |
| Msa0626270 | Msa0699780 | 0.809793 | 1.587378e-50 | -8.615850e-47 |
| Msa0628420 | Msa0699780 | 0.847963 | 8.288955e-60 | -8.615850e-47 |
| Msa0630940 | Msa0699780 | 0.801117 | 1.047642e-48 | -8.615850e-47 |
| Msa0640940 | Msa0699780 | 0.831427 | 1.679955e-55 | -8.615850e-47 |
| Msa0644030 | Msa0699780 | 0.830005 | 3.746676e-55 | -8.615850e-47 |
| Msa0647430 | Msa0699780 | 0.844623 | 6.739897e-59 | -8.615850e-47 |
| Msa0648830 | Msa0699780 | 0.802596 | 5.203511e-49 | -8.615850e-47 |
| Msa0651560 | Msa0699780 | 0.804027 | 2.630289e-49 | -8.615850e-47 |
| Msa0652690 | Msa0699780 | 0.820359 | 7.152712e-53 | -8.615850e-47 |
| Msa0655920 | Msa0699780 | 0.803212 | 3.882683e-49 | -8.615850e-47 |
| Msa0658680 | Msa0699780 | 0.800269 | 1.559740e-48 | -8.615850e-47 |
| Msa0659790 | Msa0699780 | 0.840551 | 8.124572e-58 | -8.615850e-47 |
| Msa0662630 | Msa0699780 | 0.806475 | 8.079853e-50 | -8.615850e-47 |
| Msa0679360 | Msa0699780 | 0.830769 | 2.436475e-55 | -8.615850e-47 |
| Msa0687230 | Msa0699780 | 0.812820 | 3.498356e-51 | -8.615850e-47 |
| Msa0689440 | Msa0699780 | 0.802528 | 5.374279e-49 | -8.615850e-47 |
| Msa0690310 | Msa0699780 | 0.800641 | 1.310505e-48 | -8.615850e-47 |
| Msa0694990 | Msa0699780 | 0.801633 | 8.212162e-49 | -8.615850e-47 |
| Msa0695130 | Msa0699780 | 0.811423 | 7.054438e-51 | -8.615850e-47 |
| Msa0698100 | Msa0699780 | 0.827836 | 1.255409e-54 | -8.615850e-47 |
| Msa0699780 | Msa0702270 | 0.801448 | 8.960485e-49 | -8.615850e-47 |
| Msa0699780 | Msa0703440 | 0.812180 | 4.827337e-51 | -8.615850e-47 |
| Msa0699780 | Msa0705390 | 0.822273 | 2.587275e-53 | -8.615850e-47 |
| Msa0699780 | Msa0707010 | 0.816879 | 4.404893e-52 | -8.615850e-47 |
| Msa0699780 | Msa0709120 | 0.811614 | 6.410093e-51 | -8.615850e-47 |
| Msa0699780 | Msa0712560 | 0.806831 | 6.796022e-50 | -8.615850e-47 |
| Msa0699780 | Msa0743530 | 0.837991 | 3.748613e-57 | -8.615850e-47 |
| Msa0699780 | Msa0746170 | 0.819366 | 1.206024e-52 | -8.615850e-47 |
| Msa0699780 | Msa0746210 | 0.811552 | 6.611187e-51 | -8.615850e-47 |
| Msa0699780 | Msa0748660 | 0.803034 | 4.225425e-49 | -8.615850e-47 |
| Msa0699780 | Msa0750250 | 0.812382 | 4.361617e-51 | -8.615850e-47 |
| Msa0699780 | Msa0750810 | 0.811454 | 6.944227e-51 | -8.615850e-47 |
| Msa0699780 | Msa0788120 | 0.803275 | 3.767194e-49 | -8.615850e-47 |
| Msa0699780 | Msa0789560 | 0.829499 | 4.973592e-55 | -8.615850e-47 |
| Msa0699780 | Msa0822170 | 0.840784 | 7.055971e-58 | -8.615850e-47 |
| Msa0699780 | Msa0844280 | 0.841422 | 4.798720e-58 | -8.615850e-47 |
| Msa0699780 | Msa0853950 | 0.808803 | 2.588027e-50 | -8.615850e-47 |
| Msa0699780 | Msa0865970 | 0.815644 | 8.316118e-52 | -8.615850e-47 |
| Msa0699780 | Msa0866070 | 0.806797 | 6.909418e-50 | -8.615850e-47 |
| Msa0699780 | Msa0883520 | 0.801942 | 7.097626e-49 | -8.615850e-47 |
| Msa0699780 | Msa0903780 | 0.858922 | 5.907603e-63 | -8.615850e-47 |
| Msa0699780 | Msa0934140 | 0.803238 | 3.834490e-49 | -8.615850e-47 |
| Msa0699780 | Msa0945240 | 0.826659 | 2.403204e-54 | -8.615850e-47 |
| Msa0699780 | Msa0969330 | 0.800911 | 1.153906e-48 | -8.615850e-47 |
| Msa0699780 | Msa0970320 | 0.801755 | 7.751605e-49 | -8.615850e-47 |
| Msa0699780 | Msa0971650 | 0.811491 | 6.818620e-51 | -8.615850e-47 |
| Msa0699780 | Msa0979810 | 0.857306 | 1.785630e-62 | -8.615850e-47 |
| Msa0699780 | Msa1030080 | 0.804764 | 1.846951e-49 | -8.615850e-47 |
| Msa0699780 | Msa1034700 | 0.808294 | 3.323552e-50 | -8.615850e-47 |
| Msa0699780 | Msa1034720 | 0.802375 | 5.780740e-49 | -8.615850e-47 |
| Msa0699780 | Msa1037520 | 0.812219 | 4.733575e-51 | -8.615850e-47 |
| Msa0699780 | Msa1042660 | 0.817474 | 3.235813e-52 | -8.615850e-47 |
| Msa0699780 | Msa1070390 | 0.823133 | 1.631807e-53 | -8.615850e-47 |
| Msa0699780 | Msa1072600 | 0.819210 | 1.308976e-52 | -8.615850e-47 |
| Msa0699780 | Msa1074110 | 0.801316 | 9.538833e-49 | -8.615850e-47 |
| Msa0699780 | Msa1075970 | 0.809215 | 2.112521e-50 | -8.615850e-47 |
| Msa0699780 | Msa1076560 | 0.814103 | 1.826942e-51 | -8.615850e-47 |
| Msa0699780 | Msa1089270 | 0.800274 | 1.556351e-48 | -8.615850e-47 |
| Msa0699780 | Msa1123350 | 0.865753 | 4.697146e-65 | -8.615850e-47 |
| Msa0699780 | Msa1127430 | 0.860247 | 2.359631e-63 | -8.615850e-47 |
| Msa0699780 | Msa1127590 | 0.814848 | 1.249702e-51 | -8.615850e-47 |
| Msa0699780 | Msa1131560 | 0.806066 | 9.850929e-50 | -8.615850e-47 |
| Msa0699780 | Msa1154490 | 0.833529 | 5.062050e-56 | -8.615850e-47 |
| Msa0699780 | Msa1158230 | 0.807838 | 4.155916e-50 | -8.615850e-47 |
| Msa0699780 | Msa1162080 | 0.805714 | 1.168436e-49 | -8.615850e-47 |
| Msa0699780 | Msa1169720 | 0.807681 | 4.488726e-50 | -8.615850e-47 |
| Msa0699780 | Msa1188560 | 0.816383 | 5.690397e-52 | -8.615850e-47 |
| Msa0699780 | Msa1205480 | 0.838559 | 2.676145e-57 | -8.615850e-47 |
| Msa0699780 | Msa1205590 | 0.829990 | 3.778603e-55 | -8.615850e-47 |
| Msa0699780 | Msa1206650 | 0.844154 | 9.014509e-59 | -8.615850e-47 |
| Msa0699780 | Msa1208790 | 0.828705 | 7.747200e-55 | -8.615850e-47 |
| Msa0699780 | Msa1209670 | 0.808464 | 3.057299e-50 | -8.615850e-47 |
| Msa0699780 | Msa1211340 | 0.828531 | 8.535941e-55 | -8.615850e-47 |
| Msa0699780 | Msa1211830 | 0.806948 | 6.419332e-50 | -8.615850e-47 |
| Msa0699780 | Msa1214320 | 0.802753 | 4.831401e-49 | -8.615850e-47 |
| Msa0699780 | Msa1233850 | 0.802624 | 5.135486e-49 | -8.615850e-47 |
| Msa0699780 | Msa1234620 | 0.831577 | 1.543089e-55 | -8.615850e-47 |
| Msa0699780 | Msa1250110 | 0.807383 | 5.192530e-50 | -8.615850e-47 |
| Msa0699780 | Msa1250730 | 0.807271 | 5.484575e-50 | -8.615850e-47 |
| Msa0699780 | Msa1259640 | 0.828884 | 7.014261e-55 | -8.615850e-47 |
| Msa0699780 | Msa1265590 | 0.813545 | 2.424655e-51 | -8.615850e-47 |
| Msa0699780 | Msa1266330 | 0.800385 | 1.477555e-48 | -8.615850e-47 |
| Msa0699780 | Msa1276970 | 0.803879 | 2.824192e-49 | -8.615850e-47 |
| Msa0699780 | Msa1297530 | 0.824195 | 9.206621e-54 | -8.615850e-47 |
| Msa0699780 | Msa1298100 | 0.848938 | 4.453825e-60 | -8.615850e-47 |
| Msa0699780 | Msa1299700 | 0.804076 | 2.569141e-49 | -8.615850e-47 |
| Msa0699780 | Msa1307180 | 0.810452 | 1.144811e-50 | -8.615850e-47 |
| Msa0699780 | Msa1329450 | 0.819531 | 1.105839e-52 | -8.615850e-47 |
| Msa0699780 | Msa1329790 | 0.826410 | 2.754300e-54 | -8.615850e-47 |
| Msa0699780 | Msa1336040 | 0.831422 | 1.684758e-55 | -8.615850e-47 |
| Msa0699780 | Msa1342630 | 0.805368 | 1.381045e-49 | -8.615850e-47 |
| Msa0699780 | Msa1344310 | 0.844364 | 7.915013e-59 | -8.615850e-47 |
| Msa0699780 | Msa1356610 | 0.810044 | 1.401959e-50 | -8.615850e-47 |
| Msa0699780 | Msa1366550 | 0.826612 | 2.465874e-54 | -8.615850e-47 |
| Msa0699780 | Msa1369690 | 0.802856 | 4.599898e-49 | -8.615850e-47 |
| Msa0699780 | Msa1370590 | 0.845045 | 5.186480e-59 | -8.615850e-47 |
| Msa0699780 | Msa1373820 | 0.815058 | 1.123127e-51 | -8.615850e-47 |
| Msa0699780 | Msa1373850 | 0.801269 | 9.750672e-49 | -8.615850e-47 |
| Msa0699780 | Msa1384100 | 0.842500 | 2.489946e-58 | -8.615850e-47 |
| Msa0699780 | Msa1393820 | 0.819150 | 1.351119e-52 | -8.615850e-47 |
| Msa0699780 | Msa1400120 | 0.810560 | 1.084775e-50 | -8.615850e-47 |
| Msa0699780 | Msa1409950 | 0.800397 | 1.469115e-48 | -8.615850e-47 |
| Msa0699780 | Msa1411950 | 0.858564 | 7.553989e-63 | -8.615850e-47 |
| Msa0699780 | Msa1416260 | 0.803809 | 2.919331e-49 | -8.615850e-47 |
| Msa0699780 | Msa1418240 | 0.819633 | 1.048221e-52 | -8.615850e-47 |
| Msa0699780 | Msa1421560 | 0.803396 | 3.556115e-49 | -8.615850e-47 |
| Msa0699780 | Msa1421900 | 0.810361 | 1.197327e-50 | -8.615850e-47 |
| Msa0699780 | Msa1424350 | 0.826610 | 2.468219e-54 | -8.615850e-47 |
| Msa0699780 | Msa1432130 | 0.806603 | 7.592847e-50 | -8.615850e-47 |
| Msa0699780 | Msa1433600 | 0.805066 | 1.596935e-49 | -8.615850e-47 |
| Msa0699780 | Msa1444120 | 0.848864 | 4.670504e-60 | -8.615850e-47 |
| Msa0699780 | Msa1450720 | 0.812039 | 5.181640e-51 | -8.615850e-47 |
| Msa0699780 | Msa1454870 | 0.809937 | 1.478383e-50 | -8.615850e-47 |
| Msa0699780 | Msa1459960 | 0.815487 | 9.016879e-52 | -8.615850e-47 |
| Msa0699780 | Msa1461540 | 0.812939 | 3.293036e-51 | -8.615850e-47 |
| Msa0699780 | Msa1462470 | 0.839962 | 1.157436e-57 | -8.615850e-47 |
| Msa0699780 | Msa1463030 | 0.816697 | 4.837475e-52 | -8.615850e-47 |
| Msa0125450 | Msa0699780 | 0.814652 | 1.381456e-51 | -8.615850e-47 |
| Msa0126880 | Msa0699780 | 0.833138 | 6.333450e-56 | -8.615850e-47 |
| Msa0133720 | Msa0699780 | 0.801964 | 7.021862e-49 | -8.615850e-47 |
| Msa0136120 | Msa0699780 | 0.842647 | 2.275505e-58 | -8.615850e-47 |
| Msa0137510 | Msa0699780 | 0.862789 | 3.950873e-64 | -8.615850e-47 |
| Msa0138210 | Msa0699780 | 0.807741 | 4.357923e-50 | -8.615850e-47 |
| Msa0138360 | Msa0699780 | 0.807889 | 4.054658e-50 | -8.615850e-47 |
| Msa0139670 | Msa0699780 | 0.813284 | 2.766607e-51 | -8.615850e-47 |
| Msa0141400 | Msa0699780 | 0.814497 | 1.494936e-51 | -8.615850e-47 |
| Msa0142500 | Msa0699780 | 0.814389 | 1.579588e-51 | -8.615850e-47 |
| Msa0146080 | Msa0699780 | 0.835487 | 1.630605e-56 | -8.615850e-47 |
| Msa0147980 | Msa0699780 | 0.820082 | 8.278563e-53 | -8.615850e-47 |
| Msa0149440 | Msa0699780 | 0.804227 | 2.389668e-49 | -8.615850e-47 |
| Msa0168090 | Msa0699780 | 0.809147 | 2.184619e-50 | -8.615850e-47 |
| Msa0171980 | Msa0699780 | 0.829422 | 5.194811e-55 | -8.615850e-47 |
| Msa0174000 | Msa0699780 | 0.808367 | 3.206466e-50 | -8.615850e-47 |
| Msa0183420 | Msa0699780 | 0.827064 | 1.922888e-54 | -8.615850e-47 |
| Msa0183870 | Msa0699780 | 0.821384 | 4.155511e-53 | -8.615850e-47 |
| Msa0192640 | Msa0699780 | 0.832884 | 7.326094e-56 | -8.615850e-47 |
| Msa0194920 | Msa0699780 | 0.804799 | 1.815939e-49 | -8.615850e-47 |
| Msa0210260 | Msa0699780 | 0.834852 | 2.357830e-56 | -8.615850e-47 |
| Msa0229920 | Msa0699780 | 0.800390 | 1.474069e-48 | -8.615850e-47 |
| Msa0238030 | Msa0699780 | 0.816669 | 4.909176e-52 | -8.615850e-47 |
| Msa0372490 | Msa0699780 | 0.802027 | 6.815724e-49 | -8.615850e-47 |
| Msa0378970 | Msa0699780 | 0.800188 | 1.620070e-48 | -8.615850e-47 |
| Msa0382370 | Msa0699780 | 0.847295 | 1.266134e-59 | -8.615850e-47 |
| Msa0384670 | Msa0699780 | 0.828427 | 9.046702e-55 | -8.615850e-47 |
| Msa0390480 | Msa0699780 | 0.841540 | 4.466219e-58 | -8.615850e-47 |
| Msa0395980 | Msa0699780 | 0.838111 | 3.492108e-57 | -8.615850e-47 |
| Msa0432160 | Msa0699780 | 0.836349 | 9.860268e-57 | -8.615850e-47 |
| Msa0434570 | Msa0699780 | 0.818857 | 1.574482e-52 | -8.615850e-47 |
| Msa0434770 | Msa0699780 | 0.822365 | 2.463198e-53 | -8.615850e-47 |
| Msa0440510 | Msa0699780 | 0.832993 | 6.881396e-56 | -8.615850e-47 |
| Msa0442310 | Msa0699780 | 0.814214 | 1.726859e-51 | -8.615850e-47 |
| Msa0476680 | Msa0699780 | 0.830371 | 3.049082e-55 | -8.615850e-47 |
| Msa0478580 | Msa0699780 | 0.813244 | 2.824094e-51 | -8.615850e-47 |
| Msa0480780 | Msa0699780 | 0.824279 | 8.795748e-54 | -8.615850e-47 |
| Msa0481970 | Msa0699780 | 0.813979 | 1.945157e-51 | -8.615850e-47 |
| Msa0241830 | Msa0699780 | 0.826967 | 2.028375e-54 | -8.615850e-47 |
| Msa0244970 | Msa0699780 | 0.836102 | 1.139247e-56 | -8.615850e-47 |
| Msa0244980 | Msa0699780 | 0.841046 | 6.023108e-58 | -8.615850e-47 |
| Msa0245430 | Msa0699780 | 0.807108 | 5.938047e-50 | -8.615850e-47 |
| Msa0245580 | Msa0699780 | 0.836282 | 1.025325e-56 | -8.615850e-47 |
| Msa0247060 | Msa0699780 | 0.835520 | 1.599808e-56 | -8.615850e-47 |
| Msa0279850 | Msa0699780 | 0.822085 | 2.860013e-53 | -8.615850e-47 |
| Msa0283420 | Msa0699780 | 0.826898 | 2.107206e-54 | -8.615850e-47 |
| Msa0296790 | Msa0699780 | 0.833783 | 4.373000e-56 | -8.615850e-47 |
| Msa0307960 | Msa0699780 | 0.803493 | 3.395072e-49 | -8.615850e-47 |
| Msa0312910 | Msa0699780 | 0.806955 | 6.396544e-50 | -8.615850e-47 |
| Msa0321690 | Msa0699780 | 0.828140 | 1.061044e-54 | -8.615850e-47 |
| Msa0322900 | Msa0699780 | 0.842987 | 1.847844e-58 | -8.615850e-47 |
| Msa0347950 | Msa0699780 | 0.806977 | 6.329401e-50 | -8.615850e-47 |
| Msa0347990 | Msa0699780 | 0.827244 | 1.741166e-54 | -8.615850e-47 |
| Msa0362890 | Msa0699780 | 0.809743 | 1.627473e-50 | -8.615850e-47 |
| Msa0363060 | Msa0699780 | 0.824764 | 6.762900e-54 | -8.615850e-47 |
| Msa0482940 | Msa0699780 | 0.840392 | 8.941863e-58 | -8.615850e-47 |
| Msa0485240 | Msa0699780 | 0.816531 | 5.270747e-52 | -8.615850e-47 |
| Msa0491000 | Msa0699780 | 0.845868 | 3.105313e-59 | -8.615850e-47 |
| Msa0509120 | Msa0699780 | 0.805285 | 1.436855e-49 | -8.615850e-47 |
| Msa0511770 | Msa0699780 | 0.800660 | 1.298314e-48 | -8.615850e-47 |
| Msa0514610 | Msa0699780 | 0.822151 | 2.761746e-53 | -8.615850e-47 |
| Msa0518030 | Msa0699780 | 0.812459 | 4.194313e-51 | -8.615850e-47 |
| Msa0521010 | Msa0699780 | 0.828899 | 6.955417e-55 | -8.615850e-47 |
| Msa0527190 | Msa0699780 | 0.800894 | 1.163515e-48 | -8.615850e-47 |
| Msa0531250 | Msa0699780 | 0.852496 | 4.443403e-61 | -8.615850e-47 |
| Msa0534980 | Msa0699780 | 0.853592 | 2.158340e-61 | -8.615850e-47 |
| Msa0544730 | Msa0699780 | 0.821389 | 4.144401e-53 | -8.615850e-47 |
| Msa0547990 | Msa0699780 | 0.839068 | 1.976599e-57 | -8.615850e-47 |
| Msa0556210 | Msa0699780 | 0.818713 | 1.698357e-52 | -8.615850e-47 |
| Msa0569780 | Msa0699780 | 0.820426 | 6.903371e-53 | -8.615850e-47 |
| Msa0572750 | Msa0699780 | 0.834783 | 2.454423e-56 | -8.615850e-47 |
| Msa0581970 | Msa0699780 | 0.820215 | 7.715797e-53 | -8.615850e-47 |
| Msa0583500 | Msa0699780 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
| Msa0585070 | Msa0699780 | 0.834520 | 2.858488e-56 | -8.615850e-47 |
| Msa0588090 | Msa0699780 | 0.826801 | 2.222678e-54 | -8.615850e-47 |
| Msa0597770 | Msa0699780 | 0.813102 | 3.033385e-51 | -8.615850e-47 |
| Msa0600080 | Msa0699780 | 0.802111 | 6.549287e-49 | -8.615850e-47 |
| Msa0600450 | Msa0699780 | 0.817434 | 3.304161e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699780 | MtrunA17_Chr8g0376011 | 96.005 | 801 | 26 | 2 | 1 | 795 | 1 | 801 | 0.0 | 1591 |
| Msa0699780 | MtrunA17_Chr4g0019561 | 36.506 | 704 | 364 | 16 | 143 | 791 | 519 | 1194 | 4.99e-121 | 392 |
| Msa0699780 | MtrunA17_Chr5g0447621 | 37.639 | 449 | 264 | 7 | 328 | 765 | 79 | 522 | 4.44e-91 | 297 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0699780 | AT1G14740.1 | 51.585 | 820 | 285 | 26 | 1 | 795 | 1 | 733 | 0.0 | 701 |
| Msa0699780 | AT3G63500.1 | 35.616 | 657 | 368 | 16 | 171 | 792 | 247 | 883 | 3.42e-110 | 357 |
| Msa0699780 | AT3G63500.2 | 35.616 | 657 | 368 | 16 | 171 | 792 | 522 | 1158 | 4.59e-108 | 357 |
| Msa0699780 | AT3G63500.3 | 35.616 | 657 | 368 | 16 | 171 | 792 | 522 | 1158 | 4.59e-108 | 357 |
| Msa0699780 | AT5G48160.2 | 39.326 | 445 | 246 | 8 | 337 | 767 | 93 | 527 | 4.63e-90 | 295 |
| Msa0699780 | AT5G48160.1 | 39.326 | 445 | 246 | 8 | 337 | 767 | 93 | 527 | 4.63e-90 | 295 |
| Msa0699780 | AT3G07780.3 | 37.821 | 468 | 262 | 10 | 310 | 760 | 63 | 518 | 1.34e-85 | 283 |
| Msa0699780 | AT3G07780.1 | 37.821 | 468 | 262 | 10 | 310 | 760 | 63 | 518 | 1.34e-85 | 283 |
| Msa0699780 | AT3G07780.2 | 37.821 | 468 | 262 | 10 | 310 | 760 | 74 | 529 | 3.00e-85 | 282 |
Find 197 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTGGGTCCAACCAGGTTTC+TGG | 0.125739 | 4_4:-70559803 | Msa0699780:CDS |
| GGATTGTTAGGGAAATTATT+TGG | 0.126528 | 4_4:-70558953 | Msa0699780:CDS |
| ACGTTTGTTTGGATCAAAAT+TGG | 0.188283 | 4_4:+70559880 | None:intergenic |
| GAAGTTCTGCTTTGGTATTC+TGG | 0.199668 | 4_4:-70556271 | Msa0699780:three_prime_UTR |
| AATTTATAGATTCAAGATTT+TGG | 0.200472 | 4_4:-70556217 | Msa0699780:three_prime_UTR |
| CCGGTTTGATGAGCTTCTTC+TGG | 0.202108 | 4_4:+70558463 | None:intergenic |
| CCTTGAATCTCTTTCAATCT+TGG | 0.204571 | 4_4:+70559731 | None:intergenic |
| GGAAAACATGGCAAACTTTC+CGG | 0.213766 | 4_4:-70556921 | Msa0699780:CDS |
| TGTATGGAAGAACTAGATTT+TGG | 0.225529 | 4_4:+70556830 | None:intergenic |
| CTGAAAGAGAGAGTAATATT+AGG | 0.226791 | 4_4:-70559577 | Msa0699780:CDS |
| CAAATCAAGATGGAGGAAAA+TGG | 0.235949 | 4_4:-70559658 | Msa0699780:CDS |
| CATAGGTTTGAGACTCATTC+AGG | 0.239156 | 4_4:-70559062 | Msa0699780:CDS |
| CGAGTAAAGACGATCAAATT+TGG | 0.254395 | 4_4:-70559274 | Msa0699780:CDS |
| CTTGAATCTCTTTCAATCTT+GGG | 0.262464 | 4_4:+70559732 | None:intergenic |
| CAAAGGTGGAATTGAAAGTT+TGG | 0.262902 | 4_4:-70556678 | Msa0699780:CDS |
| GTTGACTAATTCGTCTTTCT+TGG | 0.266243 | 4_4:+70558839 | None:intergenic |
| GGTAGCCTTGATGTCTTCTT+TGG | 0.277127 | 4_4:+70556754 | None:intergenic |
| TTCTCTCAAGCCTGCTTTGA+AGG | 0.277570 | 4_4:+70558817 | None:intergenic |
| GGGTCTTGATAACTTACTTC+TGG | 0.293426 | 4_4:+70559901 | None:intergenic |
| CAAAACCAGAGAGGATTGTT+AGG | 0.305807 | 4_4:-70558965 | Msa0699780:CDS |
| GTTTAGATGGTGGTGGAAAT+AGG | 0.307485 | 4_4:-70558995 | Msa0699780:CDS |
| AACAGGAAGCAAACTCTTGC+AGG | 0.328838 | 4_4:+70558638 | None:intergenic |
| GGAAACGCAGAGGAGGAAAT+TGG | 0.331271 | 4_4:-70556489 | Msa0699780:CDS |
| AAATTGAAAATCATCCATTC+TGG | 0.334409 | 4_4:+70556242 | None:intergenic |
| GATTGTTAGGGAAATTATTT+GGG | 0.334809 | 4_4:-70558952 | Msa0699780:CDS |
| GAAATACAGTTTCATTGTAT+TGG | 0.337353 | 4_4:-70558408 | Msa0699780:CDS |
| TCATCTGGGTAACGTTTGTT+TGG | 0.346007 | 4_4:+70559869 | None:intergenic |
| GGAGAGCATTGTTCGGATAA+AGG | 0.349420 | 4_4:-70556657 | Msa0699780:CDS |
| TCTCACTTGGCCATGATTGC+TGG | 0.349920 | 4_4:-70559968 | Msa0699780:exon |
| TCAAAAGGGTAAAGAGGTTA+TGG | 0.350376 | 4_4:-70559693 | Msa0699780:CDS |
| TGATGGTTTGTTGGCGAGAA+TGG | 0.357589 | 4_4:-70556396 | Msa0699780:CDS |
| GCCTTGATGTCTTCTTTGGA+TGG | 0.364546 | 4_4:+70556758 | None:intergenic |
| CCTCCTTGCTTCATCTGCCT+TGG | 0.368229 | 4_4:+70556610 | None:intergenic |
| CAGACACTGGATCTTTCTCT+TGG | 0.372476 | 4_4:-70559536 | Msa0699780:CDS |
| GAAGAAATTCTGAGAGTTTG+AGG | 0.392536 | 4_4:-70559028 | Msa0699780:CDS |
| AGATCCAGTGTCTGAACCTT+TGG | 0.396783 | 4_4:+70559545 | None:intergenic |
| CAATCAAAGTTCAAACAAAT+AGG | 0.398951 | 4_4:+70558555 | None:intergenic |
| TGAAAGAGAGAGTAATATTA+GGG | 0.403143 | 4_4:-70559576 | Msa0699780:CDS |
| GCTATGATTGTGCTTGGTTT+CGG | 0.404943 | 4_4:+70560087 | None:intergenic |
| CGTTTGTTTGGATCAAAATT+GGG | 0.410561 | 4_4:+70559881 | None:intergenic |
| TCATGTCTTGTGCAAAAGAT+TGG | 0.418986 | 4_4:-70558341 | Msa0699780:CDS |
| CAGCGTGTCCTTTGGAAGGC+TGG | 0.422697 | 4_4:+70556859 | None:intergenic |
| AATTTATTGAAGTTCTGCTT+TGG | 0.423941 | 4_4:-70556279 | Msa0699780:three_prime_UTR |
| CATGTCTTGTGCAAAAGATT+GGG | 0.423993 | 4_4:-70558340 | Msa0699780:CDS |
| AAAATGCAAGATGAAATTGA+TGG | 0.424314 | 4_4:-70556413 | Msa0699780:CDS |
| CACTGGTGCCATGCTGTTTG+TGG | 0.425017 | 4_4:-70558489 | Msa0699780:CDS |
| AAATTGCATGATCTGATTGC+AGG | 0.425913 | 4_4:+70558176 | None:intergenic |
| CATAGCAGGTTTAAGCCAAT+TGG | 0.429977 | 4_4:-70559221 | Msa0699780:CDS |
| CCTTGATGTCTTCTTTGGAT+GGG | 0.432069 | 4_4:+70556759 | None:intergenic |
| GTCTTCTTTGGATGGGGCAC+CGG | 0.435369 | 4_4:+70556766 | None:intergenic |
| TGGTGATGGTATTGTTGCTT+TGG | 0.436883 | 4_4:-70559201 | Msa0699780:CDS |
| GGAAGAGACAGCGTGTCCTT+TGG | 0.438392 | 4_4:+70556851 | None:intergenic |
| TCCGACATGGGTGGTATTGG+TGG | 0.438973 | 4_4:-70559821 | Msa0699780:CDS |
| TGAAAGCTTTCTGAGTCAAA+AGG | 0.442484 | 4_4:-70559708 | Msa0699780:CDS |
| GTGCAAGTAATACTTGTAGT+TGG | 0.443206 | 4_4:-70558533 | Msa0699780:CDS |
| GAACATGCATCGGAAATGTT+TGG | 0.443604 | 4_4:-70558381 | Msa0699780:CDS |
| GTTCATCTCCCTCTCTCACT+TGG | 0.445704 | 4_4:-70559981 | Msa0699780:five_prime_UTR |
| CCGAGCTTGAAAGGACCTTC+TGG | 0.449486 | 4_4:-70558438 | Msa0699780:CDS |
| AAATCAAGATGGAGGAAAAT+GGG | 0.449888 | 4_4:-70559657 | Msa0699780:CDS |
| TATTCTACTAGGCCACATTC+CGG | 0.450993 | 4_4:-70556785 | Msa0699780:CDS |
| CCAGAAGAAGCTCATCAAAC+CGG | 0.451534 | 4_4:-70558463 | Msa0699780:CDS |
| ACCCTTTGAAAGTGTCTCCT+TGG | 0.451962 | 4_4:+70558782 | None:intergenic |
| CTTGATGTCTTCTTTGGATG+GGG | 0.454272 | 4_4:+70556760 | None:intergenic |
| GATTCCGACATGGGTGGTAT+TGG | 0.455133 | 4_4:-70559824 | Msa0699780:CDS |
| GATTCTAGTCGCTGTAAAGA+TGG | 0.456916 | 4_4:-70558742 | Msa0699780:CDS |
| AACTGTGGTGAAGGTACTAA+TGG | 0.457321 | 4_4:-70559251 | Msa0699780:CDS |
| AGACTCATTCAGGGGATTCA+AGG | 0.459390 | 4_4:-70559052 | Msa0699780:CDS |
| ATTTCCCTAACAATCCTCTC+TGG | 0.459574 | 4_4:+70558960 | None:intergenic |
| TGGAGGCAACAAAGCAGCAT+TGG | 0.463387 | 4_4:-70556376 | Msa0699780:CDS |
| ATTGTTGCTTTGGCAAATCC+TGG | 0.463966 | 4_4:-70559191 | Msa0699780:CDS |
| CTTTGGAAGGCTGGCTTGAG+AGG | 0.464312 | 4_4:+70556868 | None:intergenic |
| GGAGGCAACAAAGCAGCATT+GGG | 0.465244 | 4_4:-70556375 | Msa0699780:CDS |
| CAGGTTTCTGGTGGTAACTC+AGG | 0.465258 | 4_4:-70559791 | Msa0699780:CDS |
| CTGAATTGCCTGCTAGACAT+AGG | 0.465919 | 4_4:-70559079 | Msa0699780:CDS |
| TTTCCTCCTCTGCGTTTCCT+CGG | 0.466448 | 4_4:+70556493 | None:intergenic |
| AAAACCAGAGAGGATTGTTA+GGG | 0.469024 | 4_4:-70558964 | Msa0699780:CDS |
| GAACGAAGAGAGAGAAACTA+AGG | 0.469538 | 4_4:+70560000 | None:intergenic |
| CTCATAAGCGTATTTCTGTA+TGG | 0.469630 | 4_4:+70556814 | None:intergenic |
| AAAGGGTACTAAAGTTCAGT+TGG | 0.475384 | 4_4:-70558766 | Msa0699780:CDS |
| AGATGAAATTGATGGTTTGT+TGG | 0.477510 | 4_4:-70556405 | Msa0699780:CDS |
| CCAAGATTGAAAGAGATTCA+AGG | 0.478614 | 4_4:-70559731 | Msa0699780:CDS |
| TTACAGTCACAGTCATCAAC+AGG | 0.482528 | 4_4:+70558621 | None:intergenic |
| CTAATGGCTCTGTGCATAGC+AGG | 0.484571 | 4_4:-70559235 | Msa0699780:CDS |
| TGGTATTGGTGGGTCCAACC+AGG | 0.485971 | 4_4:-70559810 | Msa0699780:CDS |
| AAGATCTTTACCAGCAATCA+TGG | 0.490097 | 4_4:+70559958 | None:intergenic |
| TTCTTTAACTCGTAATTCAA+CGG | 0.493120 | 4_4:-70559315 | Msa0699780:CDS |
| AAACCGGGACCGAGCTTGAA+AGG | 0.493130 | 4_4:-70558447 | Msa0699780:CDS |
| AGTAATACTTGTAGTTGGAT+TGG | 0.496287 | 4_4:-70558528 | Msa0699780:CDS |
| GGTCCTTTCAAGCTCGGTCC+CGG | 0.497493 | 4_4:+70558444 | None:intergenic |
| TCTGAGTCAAAAGGGTAAAG+AGG | 0.498142 | 4_4:-70559699 | Msa0699780:CDS |
| AAAGTTTGGAGAGCATTGTT+CGG | 0.498175 | 4_4:-70556664 | Msa0699780:CDS |
| AAGAAATTCTGAGAGTTTGA+GGG | 0.499273 | 4_4:-70559027 | Msa0699780:CDS |
| GCAACAATACCATCACCAAT+TGG | 0.506827 | 4_4:+70559206 | None:intergenic |
| TATTCTGGTTGTTTCCAGAA+TGG | 0.508722 | 4_4:-70556256 | Msa0699780:three_prime_UTR |
| TTATAATGACTACTATTACC+TGG | 0.509349 | 4_4:+70559137 | None:intergenic |
| GTCTCAAACCTATGTCTAGC+AGG | 0.510746 | 4_4:+70559071 | None:intergenic |
| TTTGAAGGTTTAGATGGTGG+TGG | 0.512388 | 4_4:-70559002 | Msa0699780:CDS |
| TATGAAGTATGAGTAGTTGA+AGG | 0.513074 | 4_4:+70559422 | None:intergenic |
| ATGAGTCGAGCTATTCTACT+AGG | 0.513430 | 4_4:-70556796 | Msa0699780:CDS |
| AAAGCCATTTGAAAATGAAA+AGG | 0.513640 | 4_4:+70559355 | None:intergenic |
| TCAGTTATCTGAGTTGGTAG+AGG | 0.514462 | 4_4:-70558691 | Msa0699780:CDS |
| GTAAGAGAAAGAGAAACATC+AGG | 0.514471 | 4_4:+70559509 | None:intergenic |
| TAATCTTCAGTTATCTGAGT+TGG | 0.514763 | 4_4:-70558697 | Msa0699780:CDS |
| GAAAGCTTTCTGAGTCAAAA+GGG | 0.515440 | 4_4:-70559707 | Msa0699780:CDS |
| AAGATTACCGTACAAGAAGC+TGG | 0.518720 | 4_4:+70558713 | None:intergenic |
| CAGGACAAAGACTGCACAGA+TGG | 0.518929 | 4_4:-70556561 | Msa0699780:CDS |
| GACTCATTCAGGGGATTCAA+GGG | 0.521327 | 4_4:-70559051 | Msa0699780:CDS |
| GGTTTCCACATAGATAACTC+AGG | 0.521637 | 4_4:+70559753 | None:intergenic |
| ATCTGATTGCAGGCTTCTGA+AGG | 0.522424 | 4_4:+70558186 | None:intergenic |
| TCCAAGGAGACACTTTCAAA+GGG | 0.522668 | 4_4:-70558783 | Msa0699780:CDS |
| AAGGGTTCCAGAAAATGATC+AGG | 0.524550 | 4_4:-70556580 | Msa0699780:CDS |
| AGATTTGCTCGGGAAACAAA+GGG | 0.525514 | 4_4:-70558599 | Msa0699780:CDS |
| GCAAATCCTGGAGATGGAAC+TGG | 0.526666 | 4_4:-70559179 | Msa0699780:CDS |
| CTGAGTTACCACCAGAAACC+TGG | 0.530099 | 4_4:+70559792 | None:intergenic |
| TTGGATGGGGCACCGGAATG+TGG | 0.530269 | 4_4:+70556773 | None:intergenic |
| TTCCAAGGAGACACTTTCAA+AGG | 0.532886 | 4_4:-70558784 | Msa0699780:CDS |
| TGAGTAGTTGAAGGCCTGCT+AGG | 0.537933 | 4_4:+70559431 | None:intergenic |
| TCTGAGAATTCAAATCAAGA+TGG | 0.538512 | 4_4:-70559668 | Msa0699780:CDS |
| AATTAGTCAACCTTCAAAGC+AGG | 0.538657 | 4_4:-70558827 | Msa0699780:CDS |
| GAAGCAAGGAGGGCGGCAGA+AGG | 0.540304 | 4_4:-70556599 | Msa0699780:CDS |
| GAACTGCATTTGAAAACTGA+TGG | 0.542360 | 4_4:-70558243 | Msa0699780:CDS |
| CCAGAAGGTCCTTTCAAGCT+CGG | 0.542946 | 4_4:+70558438 | None:intergenic |
| AGGTTTAAGCCAATTGGTGA+TGG | 0.542946 | 4_4:-70559215 | Msa0699780:CDS |
| TTTGAAGAGAAAACAGAAGC+CGG | 0.545580 | 4_4:+70556902 | None:intergenic |
| ATGTCTTGTGCAAAAGATTG+GGG | 0.545945 | 4_4:-70558339 | Msa0699780:CDS |
| TGAAGTTGTCACAGCAACTA+AGG | 0.548728 | 4_4:-70558886 | Msa0699780:CDS |
| CTGTTAGAGTAAAACCTAGC+AGG | 0.549424 | 4_4:-70559445 | Msa0699780:CDS |
| CAGAAGAAGCTCATCAAACC+GGG | 0.552003 | 4_4:-70558462 | Msa0699780:CDS |
| CAAATTTGGAACTGTGGTGA+AGG | 0.554406 | 4_4:-70559260 | Msa0699780:CDS |
| CAATCATGGCCAAGTGAGAG+AGG | 0.556764 | 4_4:+70559972 | None:intergenic |
| ATTCTAGTCGCTGTAAAGAT+GGG | 0.557373 | 4_4:-70558741 | Msa0699780:CDS |
| GGCAGATGAAGCAAGGAGGG+CGG | 0.561217 | 4_4:-70556606 | Msa0699780:CDS |
| AAGATTTGCTCGGGAAACAA+AGG | 0.561700 | 4_4:-70558600 | Msa0699780:CDS |
| TTTCTGAGAGATTCCGACAT+GGG | 0.564131 | 4_4:-70559833 | Msa0699780:CDS |
| CTGTGACTGTAAGATTTGCT+CGG | 0.565380 | 4_4:-70558610 | Msa0699780:CDS |
| AGTTGCTGTGACAACTTCAT+CGG | 0.566110 | 4_4:+70558890 | None:intergenic |
| TTACGAGTTAAAGAACAACT+TGG | 0.566899 | 4_4:+70559323 | None:intergenic |
| ATGAATAGATGCGGAAAACA+TGG | 0.567045 | 4_4:-70556933 | Msa0699780:intron |
| CAAGGCAGATGAAGCAAGGA+GGG | 0.567736 | 4_4:-70556609 | Msa0699780:CDS |
| GCTTTGGCAAATCCTGGAGA+TGG | 0.571496 | 4_4:-70559185 | Msa0699780:CDS |
| TTCAAAGCAGGCTTGAGAGA+AGG | 0.571954 | 4_4:-70558815 | Msa0699780:CDS |
| CTAACACCAGTTCCATCTCC+AGG | 0.576360 | 4_4:+70559173 | None:intergenic |
| GTTAGTTCATTTATGCAACC+AGG | 0.577258 | 4_4:-70559155 | Msa0699780:CDS |
| GCTGGTAAAGATCTTCGTAA+TGG | 0.577310 | 4_4:-70559950 | Msa0699780:CDS |
| TGGGAAGCGAGGATCGCAAA+GGG | 0.578869 | 4_4:-70558269 | Msa0699780:CDS |
| GACGATCAAATTTGGAACTG+TGG | 0.579357 | 4_4:-70559266 | Msa0699780:CDS |
| CCCATCCAAAGAAGACATCA+AGG | 0.582862 | 4_4:-70556759 | Msa0699780:CDS |
| GAGACCAAAGGTTCAGACAC+TGG | 0.583046 | 4_4:-70559549 | Msa0699780:CDS |
| GAAAGGACCTTCTGGTACCA+CGG | 0.584387 | 4_4:-70558430 | Msa0699780:CDS |
| AGCGAAAATGTTTCAAACCA+AGG | 0.585612 | 4_4:-70556627 | Msa0699780:CDS |
| GAAATTGGATGAAATGAAAG+TGG | 0.585716 | 4_4:-70556474 | Msa0699780:CDS |
| GGGTCCAACCAGGTTTCTGG+TGG | 0.586519 | 4_4:-70559800 | Msa0699780:CDS |
| GCAGCTTTACTAAGCAAAGG+TGG | 0.587422 | 4_4:-70556692 | Msa0699780:CDS |
| GAGACAGCGTGTCCTTTGGA+AGG | 0.588812 | 4_4:+70556855 | None:intergenic |
| TTAGCAGCTTTACTAAGCAA+AGG | 0.589034 | 4_4:-70556695 | Msa0699780:CDS |
| GGACTGTCCAGCTTCTTGTA+CGG | 0.589156 | 4_4:-70558720 | Msa0699780:CDS |
| CTCTCAAGCCAGCCTTCCAA+AGG | 0.589453 | 4_4:-70556867 | Msa0699780:CDS |
| ATAGGTTTGAGACTCATTCA+GGG | 0.591379 | 4_4:-70559061 | Msa0699780:CDS |
| AAGCAAGGAGGGCGGCAGAA+GGG | 0.593219 | 4_4:-70556598 | Msa0699780:CDS |
| CCGACATGGGTGGTATTGGT+GGG | 0.593598 | 4_4:-70559820 | Msa0699780:CDS |
| GAGAAGGTCTGATCTTTCCA+AGG | 0.598294 | 4_4:-70558799 | Msa0699780:CDS |
| TGTGACTGTAAGATTTGCTC+GGG | 0.599646 | 4_4:-70558609 | Msa0699780:CDS |
| TGTCTAGCAGGCAATTCAGA+AGG | 0.601429 | 4_4:+70559083 | None:intergenic |
| ACAATCAAGCTCTTTCAACA+AGG | 0.601694 | 4_4:+70558308 | None:intergenic |
| AGAAATTCTGAGAGTTTGAG+GGG | 0.603264 | 4_4:-70559026 | Msa0699780:CDS |
| GAGAATTCAAATCAAGATGG+AGG | 0.603346 | 4_4:-70559665 | Msa0699780:CDS |
| AAACCAAGGCAGATGAAGCA+AGG | 0.604039 | 4_4:-70556613 | Msa0699780:CDS |
| CTGAGAGATTCCGACATGGG+TGG | 0.605479 | 4_4:-70559830 | Msa0699780:CDS |
| AATCATGGCCAAGTGAGAGA+GGG | 0.606734 | 4_4:+70559973 | None:intergenic |
| CCCACCAATACCACCCATGT+CGG | 0.609710 | 4_4:+70559820 | None:intergenic |
| AAGCGAGGATCGCAAAGGGA+AGG | 0.617272 | 4_4:-70558265 | Msa0699780:CDS |
| AATGGTGTTGCTGATTCTGA+TGG | 0.626641 | 4_4:-70559932 | Msa0699780:CDS |
| ATGGGAAGCGAGGATCGCAA+AGG | 0.626733 | 4_4:-70558270 | Msa0699780:CDS |
| TATTGGATGTGAACATGCAT+CGG | 0.629214 | 4_4:-70558391 | Msa0699780:CDS |
| TTAGAATAAGAATGAGACAA+AGG | 0.633322 | 4_4:+70559380 | None:intergenic |
| AAGAGCTTGATTGTGTGAGG+AGG | 0.633626 | 4_4:-70558299 | Msa0699780:CDS |
| ACAATGAAACTGTATTTCCG+TGG | 0.634167 | 4_4:+70558413 | None:intergenic |
| TGTATTTCCGTGGTACCAGA+AGG | 0.636444 | 4_4:+70558423 | None:intergenic |
| GATGTGATGTTTGTTCACAC+TGG | 0.637613 | 4_4:-70558506 | Msa0699780:CDS |
| GTTTCCACATAGATAACTCA+GGG | 0.638114 | 4_4:+70559754 | None:intergenic |
| TAGGTTTGAGACTCATTCAG+GGG | 0.639490 | 4_4:-70559060 | Msa0699780:CDS |
| TGAAAGAGCTTGATTGTGTG+AGG | 0.645254 | 4_4:-70558302 | Msa0699780:CDS |
| ATTGGATGAAATGAAAGTGG+TGG | 0.645371 | 4_4:-70556471 | Msa0699780:CDS |
| TCTGGATGCCACAAACAGCA+TGG | 0.649091 | 4_4:+70558481 | None:intergenic |
| ATACCGAGGAAACGCAGAGG+AGG | 0.654221 | 4_4:-70556496 | Msa0699780:CDS |
| TGTCTTGTGCAAAAGATTGG+GGG | 0.657693 | 4_4:-70558338 | Msa0699780:CDS |
| TATTAGGGATAAGAGACCAA+AGG | 0.659782 | 4_4:-70559561 | Msa0699780:CDS |
| CCAAGGCAGATGAAGCAAGG+AGG | 0.661271 | 4_4:-70556610 | Msa0699780:CDS |
| TTGACCCTGAGTTATCTATG+TGG | 0.661402 | 4_4:-70559758 | Msa0699780:CDS |
| GTTACCACCAGAAACCTGGT+TGG | 0.662098 | 4_4:+70559796 | None:intergenic |
| TGGTTTGTTGGCGAGAATGG+AGG | 0.674598 | 4_4:-70556393 | Msa0699780:CDS |
| ACTCATTCAGGGGATTCAAG+GGG | 0.678667 | 4_4:-70559050 | Msa0699780:CDS |
| GGAATCTTTCAAAACCAGAG+AGG | 0.683101 | 4_4:-70558974 | Msa0699780:CDS |
| ACTCTGTCTGAATGATACCG+AGG | 0.693322 | 4_4:-70556510 | Msa0699780:CDS |
| AATTTGATCGTCTTTACTCG+CGG | 0.693340 | 4_4:+70559277 | None:intergenic |
| GAGCATTGTTCGGATAAAGG+AGG | 0.695694 | 4_4:-70556654 | Msa0699780:CDS |
| ATGATACCGAGGAAACGCAG+AGG | 0.740426 | 4_4:-70556499 | Msa0699780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AACTAAAAATATATGAAAAA+AGG | + | chr4_4:70559884-70559903 | None:intergenic | 10.0% |
| !! | TAGATATCAGATATAATTAT+AGG | + | chr4_4:70559252-70559271 | None:intergenic | 15.0% |
| !!! | AATTTATAGATTCAAGATTT+TGG | - | chr4_4:70560011-70560030 | Msa0699780:five_prime_UTR | 15.0% |
| !! | TGAATTGTCAATGAAAAAAT+AGG | + | chr4_4:70557310-70557329 | None:intergenic | 20.0% |
| !!! | TATTTTTTCATTGACAATTC+AGG | - | chr4_4:70557309-70557328 | Msa0699780:intron | 20.0% |
| !! | TGTTAATTGAATTTAGTGTT+TGG | - | chr4_4:70558353-70558372 | Msa0699780:CDS | 20.0% |
| !!! | TTTTTTAAGACAAGAAATTC+AGG | - | chr4_4:70558441-70558460 | Msa0699780:CDS | 20.0% |
| !!! | TTTTTAAGACAAGAAATTCA+GGG | - | chr4_4:70558442-70558461 | Msa0699780:CDS | 20.0% |
| !!! | GAATTTAAAGTGATTGTTTT+TGG | - | chr4_4:70558813-70558832 | Msa0699780:CDS | 20.0% |
| !! | TTGAATATTTATGCCTAATA+TGG | - | chr4_4:70558880-70558899 | Msa0699780:CDS | 20.0% |
| !!! | TTTATTTTGTTTTCTTACTC+AGG | - | chr4_4:70559907-70559926 | Msa0699780:CDS | 20.0% |
| ! | TGAAAGAGAGAGTAATATTA+GGG | - | chr4_4:70556652-70556671 | Msa0699780:CDS | 25.0% |
| ! | TTAGAATAAGAATGAGACAA+AGG | + | chr4_4:70556851-70556870 | None:intergenic | 25.0% |
| ! | AAAGCCATTTGAAAATGAAA+AGG | + | chr4_4:70556876-70556895 | None:intergenic | 25.0% |
| ! | TTCTTTAACTCGTAATTCAA+CGG | - | chr4_4:70556913-70556932 | Msa0699780:CDS | 25.0% |
| ! | TTATAATGACTACTATTACC+TGG | + | chr4_4:70557094-70557113 | None:intergenic | 25.0% |
| ! | ATTCAGAAGGAAAAAAAGAA+TGG | + | chr4_4:70557135-70557154 | None:intergenic | 25.0% |
| ! | GATTGTTAGGGAAATTATTT+GGG | - | chr4_4:70557276-70557295 | Msa0699780:intron | 25.0% |
| ! | CAATCAAAGTTCAAACAAAT+AGG | + | chr4_4:70557676-70557695 | None:intergenic | 25.0% |
| ! | GAAATACAGTTTCATTGTAT+TGG | - | chr4_4:70557820-70557839 | Msa0699780:intron | 25.0% |
| !!! | ATTTTTATTTCAGCAATGAC+TGG | + | chr4_4:70558293-70558312 | None:intergenic | 25.0% |
| ! | GAAAAAATCAAACAATGATG+AGG | - | chr4_4:70558386-70558405 | Msa0699780:CDS | 25.0% |
| ! | TTGTCTTAAAAAAACATTGC+TGG | + | chr4_4:70558434-70558453 | None:intergenic | 25.0% |
| ! | CAAAAGCAAATCTATTTGAA+TGG | - | chr4_4:70558593-70558612 | Msa0699780:CDS | 25.0% |
| ! | ATTGTCAATCAAACAAATTG+AGG | + | chr4_4:70558661-70558680 | None:intergenic | 25.0% |
| ! | TATTTATGCCTAATATGGTA+TGG | - | chr4_4:70558885-70558904 | Msa0699780:CDS | 25.0% |
| ! | ATTTATGCCTAATATGGTAT+GGG | - | chr4_4:70558886-70558905 | Msa0699780:CDS | 25.0% |
| !! | ATTTTTCTGATGAATAGATG+CGG | - | chr4_4:70559286-70559305 | Msa0699780:CDS | 25.0% |
| !!! | ATTTTTTAGTTCGCTAAAGA+TGG | + | chr4_4:70559498-70559517 | None:intergenic | 25.0% |
| ! | AAAATGCAAGATGAAATTGA+TGG | - | chr4_4:70559815-70559834 | Msa0699780:CDS | 25.0% |
| ! | AATTTATTGAAGTTCTGCTT+TGG | - | chr4_4:70559949-70559968 | Msa0699780:CDS | 25.0% |
| ! | AAATTGAAAATCATCCATTC+TGG | + | chr4_4:70559989-70560008 | None:intergenic | 25.0% |
| ! | TTTTATGCTATGATTGTGCT+TGG | + | chr4_4:70556150-70556169 | None:intergenic | 30.0% |
| CGTTTGTTTGGATCAAAATT+GGG | + | chr4_4:70556350-70556369 | None:intergenic | 30.0% | |
| ACGTTTGTTTGGATCAAAAT+TGG | + | chr4_4:70556351-70556370 | None:intergenic | 30.0% | |
| !! | AAACAGCATCTTTTTCATCT+GGG | + | chr4_4:70556376-70556395 | None:intergenic | 30.0% |
| !! | AAAACAGCATCTTTTTCATC+TGG | + | chr4_4:70556377-70556396 | None:intergenic | 30.0% |
| CTTGAATCTCTTTCAATCTT+GGG | + | chr4_4:70556499-70556518 | None:intergenic | 30.0% | |
| TCTGAGAATTCAAATCAAGA+TGG | - | chr4_4:70556560-70556579 | Msa0699780:CDS | 30.0% | |
| AAATCAAGATGGAGGAAAAT+GGG | - | chr4_4:70556571-70556590 | Msa0699780:CDS | 30.0% | |
| CTGAAAGAGAGAGTAATATT+AGG | - | chr4_4:70556651-70556670 | Msa0699780:CDS | 30.0% | |
| ! | TCAAATGCTTTTCACAACAA+TGG | - | chr4_4:70556746-70556765 | Msa0699780:CDS | 30.0% |
| TATGAAGTATGAGTAGTTGA+AGG | + | chr4_4:70556809-70556828 | None:intergenic | 30.0% | |
| ! | AACGCCTTTTCATTTTCAAA+TGG | - | chr4_4:70556869-70556888 | Msa0699780:CDS | 30.0% |
| TTACGAGTTAAAGAACAACT+TGG | + | chr4_4:70556908-70556927 | None:intergenic | 30.0% | |
| ! | AAGAAATTCTGAGAGTTTGA+GGG | - | chr4_4:70557201-70557220 | Msa0699780:intron | 30.0% |
| GGATTGTTAGGGAAATTATT+TGG | - | chr4_4:70557275-70557294 | Msa0699780:intron | 30.0% | |
| TAATCTTCAGTTATCTGAGT+TGG | - | chr4_4:70557531-70557550 | Msa0699780:intron | 30.0% | |
| AGTAATACTTGTAGTTGGAT+TGG | - | chr4_4:70557700-70557719 | Msa0699780:intron | 30.0% | |
| AGTTAGTAGGATTGTGAATA+GGG | - | chr4_4:70558163-70558182 | Msa0699780:intron | 30.0% | |
| !! | GGACACAAATTTTGATATGA+AGG | - | chr4_4:70558188-70558207 | Msa0699780:CDS | 30.0% |
| !! | CACAAATTTTGATATGAAGG+TGG | - | chr4_4:70558191-70558210 | Msa0699780:CDS | 30.0% |
| CAAATAACAGACAATTCAGA+AGG | - | chr4_4:70558317-70558336 | Msa0699780:CDS | 30.0% | |
| TTTAGTGTTTGGTTGTTCAA+AGG | - | chr4_4:70558364-70558383 | Msa0699780:CDS | 30.0% | |
| AAATCAAACAATGATGAGGA+TGG | - | chr4_4:70558390-70558409 | Msa0699780:CDS | 30.0% | |
| AAAACATTGCTGGAAAACTT+TGG | + | chr4_4:70558424-70558443 | None:intergenic | 30.0% | |
| !! | TGTTGATATTGCTTTTGAAG+TGG | - | chr4_4:70558482-70558501 | Msa0699780:CDS | 30.0% |
| !!! | GTTGATATTGCTTTTGAAGT+GGG | - | chr4_4:70558483-70558502 | Msa0699780:CDS | 30.0% |
| AGTGGGATTATAAGCATATT+TGG | - | chr4_4:70558500-70558519 | Msa0699780:CDS | 30.0% | |
| ! | AAAATGTTCACGAGAGATTT+TGG | + | chr4_4:70558553-70558572 | None:intergenic | 30.0% |
| ATATTGAAGCTGAATACTGT+AGG | + | chr4_4:70558705-70558724 | None:intergenic | 30.0% | |
| AAATGCAAAATACCATTGCT+AGG | + | chr4_4:70558944-70558963 | None:intergenic | 30.0% | |
| ! | TTGAAATGTGCTTTTCTCTT+TGG | - | chr4_4:70559066-70559085 | Msa0699780:CDS | 30.0% |
| AGTTACATCAACACATTCAA+CGG | + | chr4_4:70559094-70559113 | None:intergenic | 30.0% | |
| TCAATAGTTAAAGCTAAAGC+AGG | + | chr4_4:70559181-70559200 | None:intergenic | 30.0% | |
| ! | TGTATGGAAGAACTAGATTT+TGG | + | chr4_4:70559401-70559420 | None:intergenic | 30.0% |
| GAAATTGGATGAAATGAAAG+TGG | - | chr4_4:70559754-70559773 | Msa0699780:CDS | 30.0% | |
| ! | AGATGAAATTGATGGTTTGT+TGG | - | chr4_4:70559823-70559842 | Msa0699780:CDS | 30.0% |
| AAGATCTTTACCAGCAATCA+TGG | + | chr4_4:70556273-70556292 | None:intergenic | 35.0% | |
| GTTTCCACATAGATAACTCA+GGG | + | chr4_4:70556477-70556496 | None:intergenic | 35.0% | |
| CCTTGAATCTCTTTCAATCT+TGG | + | chr4_4:70556500-70556519 | None:intergenic | 35.0% | |
| CCAAGATTGAAAGAGATTCA+AGG | - | chr4_4:70556497-70556516 | Msa0699780:CDS | 35.0% | |
| TGAAAGCTTTCTGAGTCAAA+AGG | - | chr4_4:70556520-70556539 | Msa0699780:CDS | 35.0% | |
| GAAAGCTTTCTGAGTCAAAA+GGG | - | chr4_4:70556521-70556540 | Msa0699780:CDS | 35.0% | |
| TCAAAAGGGTAAAGAGGTTA+TGG | - | chr4_4:70556535-70556554 | Msa0699780:CDS | 35.0% | |
| GAGAATTCAAATCAAGATGG+AGG | - | chr4_4:70556563-70556582 | Msa0699780:CDS | 35.0% | |
| CAAATCAAGATGGAGGAAAA+TGG | - | chr4_4:70556570-70556589 | Msa0699780:CDS | 35.0% | |
| TATTAGGGATAAGAGACCAA+AGG | - | chr4_4:70556667-70556686 | Msa0699780:CDS | 35.0% | |
| GTAAGAGAAAGAGAAACATC+AGG | + | chr4_4:70556722-70556741 | None:intergenic | 35.0% | |
| AATTTGATCGTCTTTACTCG+CGG | + | chr4_4:70556954-70556973 | None:intergenic | 35.0% | |
| CGAGTAAAGACGATCAAATT+TGG | - | chr4_4:70556954-70556973 | Msa0699780:intron | 35.0% | |
| GTTAGTTCATTTATGCAACC+AGG | - | chr4_4:70557073-70557092 | Msa0699780:intron | 35.0% | |
| ! | ATAGGTTTGAGACTCATTCA+GGG | - | chr4_4:70557167-70557186 | Msa0699780:intron | 35.0% |
| ! | GAAGAAATTCTGAGAGTTTG+AGG | - | chr4_4:70557200-70557219 | Msa0699780:intron | 35.0% |
| ! | AGAAATTCTGAGAGTTTGAG+GGG | - | chr4_4:70557202-70557221 | Msa0699780:intron | 35.0% |
| AAAACCAGAGAGGATTGTTA+GGG | - | chr4_4:70557264-70557283 | Msa0699780:intron | 35.0% | |
| GTTGACTAATTCGTCTTTCT+TGG | + | chr4_4:70557392-70557411 | None:intergenic | 35.0% | |
| AATTAGTCAACCTTCAAAGC+AGG | - | chr4_4:70557401-70557420 | Msa0699780:intron | 35.0% | |
| !! | AAAGGGTACTAAAGTTCAGT+TGG | - | chr4_4:70557462-70557481 | Msa0699780:intron | 35.0% |
| ATTCTAGTCGCTGTAAAGAT+GGG | - | chr4_4:70557487-70557506 | Msa0699780:intron | 35.0% | |
| ! | TGGTAGAGGTTTTCTTGTAT+AGG | - | chr4_4:70557551-70557570 | Msa0699780:intron | 35.0% |
| ! | TAGAGGTTTTCTTGTATAGG+AGG | - | chr4_4:70557554-70557573 | Msa0699780:intron | 35.0% |
| GTGCAAGTAATACTTGTAGT+TGG | - | chr4_4:70557695-70557714 | Msa0699780:intron | 35.0% | |
| ACAATGAAACTGTATTTCCG+TGG | + | chr4_4:70557818-70557837 | None:intergenic | 35.0% | |
| TATTGGATGTGAACATGCAT+CGG | - | chr4_4:70557837-70557856 | Msa0699780:intron | 35.0% | |
| TCATGTCTTGTGCAAAAGAT+TGG | - | chr4_4:70557887-70557906 | Msa0699780:intron | 35.0% | |
| CATGTCTTGTGCAAAAGATT+GGG | - | chr4_4:70557888-70557907 | Msa0699780:intron | 35.0% | |
| ATGTCTTGTGCAAAAGATTG+GGG | - | chr4_4:70557889-70557908 | Msa0699780:intron | 35.0% | |
| ACAATCAAGCTCTTTCAACA+AGG | + | chr4_4:70557923-70557942 | None:intergenic | 35.0% | |
| GAACTGCATTTGAAAACTGA+TGG | - | chr4_4:70557985-70558004 | Msa0699780:intron | 35.0% | |
| AAATTGCATGATCTGATTGC+AGG | + | chr4_4:70558055-70558074 | None:intergenic | 35.0% | |
| GAGTTAGTAGGATTGTGAAT+AGG | - | chr4_4:70558162-70558181 | Msa0699780:intron | 35.0% | |
| CATAACACCCATACCATATT+AGG | + | chr4_4:70558896-70558915 | None:intergenic | 35.0% | |
| ! | TGGGTGTTATGTTACAAAGT+TGG | - | chr4_4:70558905-70558924 | Msa0699780:CDS | 35.0% |
| ! | GCAATGGTATTTTGCATTTG+AGG | - | chr4_4:70558945-70558964 | Msa0699780:CDS | 35.0% |
| !! | TGGTATTTTGCATTTGAGGT+AGG | - | chr4_4:70558949-70558968 | Msa0699780:CDS | 35.0% |
| AGATGACACAACAAATCACA+GGG | + | chr4_4:70559141-70559160 | None:intergenic | 35.0% | |
| AAGATGACACAACAAATCAC+AGG | + | chr4_4:70559142-70559161 | None:intergenic | 35.0% | |
| !! | TGTGATTTGTTGTGTCATCT+TGG | - | chr4_4:70559141-70559160 | Msa0699780:CDS | 35.0% |
| !! | GTGATTTGTTGTGTCATCTT+GGG | - | chr4_4:70559142-70559161 | Msa0699780:CDS | 35.0% |
| GTTAAAGCTAAAGCAGGAAA+AGG | + | chr4_4:70559175-70559194 | None:intergenic | 35.0% | |
| ATGAATAGATGCGGAAAACA+TGG | - | chr4_4:70559295-70559314 | Msa0699780:CDS | 35.0% | |
| TTTGAAGAGAAAACAGAAGC+CGG | + | chr4_4:70559329-70559348 | None:intergenic | 35.0% | |
| ! | CTCATAAGCGTATTTCTGTA+TGG | + | chr4_4:70559417-70559436 | None:intergenic | 35.0% |
| TTAGCAGCTTTACTAAGCAA+AGG | - | chr4_4:70559533-70559552 | Msa0699780:CDS | 35.0% | |
| CAAAGGTGGAATTGAAAGTT+TGG | - | chr4_4:70559550-70559569 | Msa0699780:CDS | 35.0% | |
| !! | AAAGTTTGGAGAGCATTGTT+CGG | - | chr4_4:70559564-70559583 | Msa0699780:CDS | 35.0% |
| AGCGAAAATGTTTCAAACCA+AGG | - | chr4_4:70559601-70559620 | Msa0699780:CDS | 35.0% | |
| ! | TCTTTGTCCTGATCATTTTC+TGG | + | chr4_4:70559658-70559677 | None:intergenic | 35.0% |
| ATTGGATGAAATGAAAGTGG+TGG | - | chr4_4:70559757-70559776 | Msa0699780:CDS | 35.0% | |
| ! | TATTCTGGTTGTTTCCAGAA+TGG | - | chr4_4:70559972-70559991 | Msa0699780:exon | 35.0% |
| GCTATGATTGTGCTTGGTTT+CGG | + | chr4_4:70556144-70556163 | None:intergenic | 40.0% | |
| GAACGAAGAGAGAGAAACTA+AGG | + | chr4_4:70556231-70556250 | None:intergenic | 40.0% | |
| GCTGGTAAAGATCTTCGTAA+TGG | - | chr4_4:70556278-70556297 | Msa0699780:three_prime_UTR | 40.0% | |
| !! | AATGGTGTTGCTGATTCTGA+TGG | - | chr4_4:70556296-70556315 | Msa0699780:three_prime_UTR | 40.0% |
| ! | GGGTCTTGATAACTTACTTC+TGG | + | chr4_4:70556330-70556349 | None:intergenic | 40.0% |
| TCATCTGGGTAACGTTTGTT+TGG | + | chr4_4:70556362-70556381 | None:intergenic | 40.0% | |
| !! | TTTTCTGAGAGATTCCGACA+TGG | - | chr4_4:70556394-70556413 | Msa0699780:CDS | 40.0% |
| ! | TTTCTGAGAGATTCCGACAT+GGG | - | chr4_4:70556395-70556414 | Msa0699780:CDS | 40.0% |
| TTGACCCTGAGTTATCTATG+TGG | - | chr4_4:70556470-70556489 | Msa0699780:CDS | 40.0% | |
| GGTTTCCACATAGATAACTC+AGG | + | chr4_4:70556478-70556497 | None:intergenic | 40.0% | |
| TCTGAGTCAAAAGGGTAAAG+AGG | - | chr4_4:70556529-70556548 | Msa0699780:CDS | 40.0% | |
| ! | CTGCTAGGTTTTACTCTAAC+AGG | + | chr4_4:70556785-70556804 | None:intergenic | 40.0% |
| CTGTTAGAGTAAAACCTAGC+AGG | - | chr4_4:70556783-70556802 | Msa0699780:CDS | 40.0% | |
| ! | GACGATCAAATTTGGAACTG+TGG | - | chr4_4:70556962-70556981 | Msa0699780:intron | 40.0% |
| ! | CAAATTTGGAACTGTGGTGA+AGG | - | chr4_4:70556968-70556987 | Msa0699780:intron | 40.0% |
| !! | AACTGTGGTGAAGGTACTAA+TGG | - | chr4_4:70556977-70556996 | Msa0699780:intron | 40.0% |
| CATAGCAGGTTTAAGCCAAT+TGG | - | chr4_4:70557007-70557026 | Msa0699780:intron | 40.0% | |
| AGGTTTAAGCCAATTGGTGA+TGG | - | chr4_4:70557013-70557032 | Msa0699780:intron | 40.0% | |
| GCAACAATACCATCACCAAT+TGG | + | chr4_4:70557025-70557044 | None:intergenic | 40.0% | |
| !! | TGGTGATGGTATTGTTGCTT+TGG | - | chr4_4:70557027-70557046 | Msa0699780:intron | 40.0% |
| !! | ATTGTTGCTTTGGCAAATCC+TGG | - | chr4_4:70557037-70557056 | Msa0699780:intron | 40.0% |
| ! | CATAGGTTTGAGACTCATTC+AGG | - | chr4_4:70557166-70557185 | Msa0699780:intron | 40.0% |
| ! | TAGGTTTGAGACTCATTCAG+GGG | - | chr4_4:70557168-70557187 | Msa0699780:intron | 40.0% |
| !!! | AGGGGTTTTGAAGGTTTAGA+TGG | - | chr4_4:70557220-70557239 | Msa0699780:intron | 40.0% |
| !!! | GGTTTTGAAGGTTTAGATGG+TGG | - | chr4_4:70557223-70557242 | Msa0699780:intron | 40.0% |
| ! | TTTGAAGGTTTAGATGGTGG+TGG | - | chr4_4:70557226-70557245 | Msa0699780:intron | 40.0% |
| !! | GTTTAGATGGTGGTGGAAAT+AGG | - | chr4_4:70557233-70557252 | Msa0699780:intron | 40.0% |
| GGAATCTTTCAAAACCAGAG+AGG | - | chr4_4:70557254-70557273 | Msa0699780:intron | 40.0% | |
| CAAAACCAGAGAGGATTGTT+AGG | - | chr4_4:70557263-70557282 | Msa0699780:intron | 40.0% | |
| ATTTCCCTAACAATCCTCTC+TGG | + | chr4_4:70557271-70557290 | None:intergenic | 40.0% | |
| AGTTGCTGTGACAACTTCAT+CGG | + | chr4_4:70557341-70557360 | None:intergenic | 40.0% | |
| TGAAGTTGTCACAGCAACTA+AGG | - | chr4_4:70557342-70557361 | Msa0699780:intron | 40.0% | |
| TTCCAAGGAGACACTTTCAA+AGG | - | chr4_4:70557444-70557463 | Msa0699780:intron | 40.0% | |
| TCCAAGGAGACACTTTCAAA+GGG | - | chr4_4:70557445-70557464 | Msa0699780:intron | 40.0% | |
| GATTCTAGTCGCTGTAAAGA+TGG | - | chr4_4:70557486-70557505 | Msa0699780:intron | 40.0% | |
| AAGATTACCGTACAAGAAGC+TGG | + | chr4_4:70557518-70557537 | None:intergenic | 40.0% | |
| !! | TCAGTTATCTGAGTTGGTAG+AGG | - | chr4_4:70557537-70557556 | Msa0699780:intron | 40.0% |
| TTACAGTCACAGTCATCAAC+AGG | + | chr4_4:70557610-70557629 | None:intergenic | 40.0% | |
| ! | CTGTGACTGTAAGATTTGCT+CGG | - | chr4_4:70557618-70557637 | Msa0699780:intron | 40.0% |
| ! | TGTGACTGTAAGATTTGCTC+GGG | - | chr4_4:70557619-70557638 | Msa0699780:intron | 40.0% |
| ! | AAGATTTGCTCGGGAAACAA+AGG | - | chr4_4:70557628-70557647 | Msa0699780:intron | 40.0% |
| ! | AGATTTGCTCGGGAAACAAA+GGG | - | chr4_4:70557629-70557648 | Msa0699780:intron | 40.0% |
| GATGTGATGTTTGTTCACAC+TGG | - | chr4_4:70557722-70557741 | Msa0699780:intron | 40.0% | |
| GAACATGCATCGGAAATGTT+TGG | - | chr4_4:70557847-70557866 | Msa0699780:intron | 40.0% | |
| TGTCTTGTGCAAAAGATTGG+GGG | - | chr4_4:70557890-70557909 | Msa0699780:intron | 40.0% | |
| TGAAAGAGCTTGATTGTGTG+AGG | - | chr4_4:70557926-70557945 | Msa0699780:intron | 40.0% | |
| ! | TTGTGTGAGGAGGATTTTCA+TGG | - | chr4_4:70557939-70557958 | Msa0699780:intron | 40.0% |
| ! | TGTGTGAGGAGGATTTTCAT+GGG | - | chr4_4:70557940-70557959 | Msa0699780:intron | 40.0% |
| AACTGTAAGTGTCTCGACTA+TGG | - | chr4_4:70558078-70558097 | Msa0699780:intron | 40.0% | |
| AGTAGGATTGTGAATAGGGA+AGG | - | chr4_4:70558167-70558186 | Msa0699780:intron | 40.0% | |
| CAAACAATGATGAGGATGGA+TGG | - | chr4_4:70558394-70558413 | Msa0699780:CDS | 40.0% | |
| ! | GTTTGTGTCGATGCTTCATA+GGG | + | chr4_4:70559003-70559022 | None:intergenic | 40.0% |
| ! | TGTTTGTGTCGATGCTTCAT+AGG | + | chr4_4:70559004-70559023 | None:intergenic | 40.0% |
| !! | ATGAAGCATCGACACAAACA+CGG | - | chr4_4:70559004-70559023 | Msa0699780:CDS | 40.0% |
| GGAAAACATGGCAAACTTTC+CGG | - | chr4_4:70559307-70559326 | Msa0699780:CDS | 40.0% | |
| ! | GGCTTCTGTTTTCTCTTCAA+AGG | - | chr4_4:70559328-70559347 | Msa0699780:CDS | 40.0% |
| ATGAGTCGAGCTATTCTACT+AGG | - | chr4_4:70559432-70559451 | Msa0699780:CDS | 40.0% | |
| TATTCTACTAGGCCACATTC+CGG | - | chr4_4:70559443-70559462 | Msa0699780:CDS | 40.0% | |
| CTTGATGTCTTCTTTGGATG+GGG | + | chr4_4:70559471-70559490 | None:intergenic | 40.0% | |
| CCTTGATGTCTTCTTTGGAT+GGG | + | chr4_4:70559472-70559491 | None:intergenic | 40.0% | |
| AAGGGTTCCAGAAAATGATC+AGG | - | chr4_4:70559648-70559667 | Msa0699780:CDS | 40.0% | |
| GAAGTTCTGCTTTGGTATTC+TGG | - | chr4_4:70559957-70559976 | Msa0699780:CDS | 40.0% | |
| AATCATGGCCAAGTGAGAGA+GGG | + | chr4_4:70556258-70556277 | None:intergenic | 45.0% | |
| AGATCCAGTGTCTGAACCTT+TGG | + | chr4_4:70556686-70556705 | None:intergenic | 45.0% | |
| CAGACACTGGATCTTTCTCT+TGG | - | chr4_4:70556692-70556711 | Msa0699780:CDS | 45.0% | |
| TGTCTAGCAGGCAATTCAGA+AGG | + | chr4_4:70557148-70557167 | None:intergenic | 45.0% | |
| CTGAATTGCCTGCTAGACAT+AGG | - | chr4_4:70557149-70557168 | Msa0699780:intron | 45.0% | |
| GTCTCAAACCTATGTCTAGC+AGG | + | chr4_4:70557160-70557179 | None:intergenic | 45.0% | |
| AGACTCATTCAGGGGATTCA+AGG | - | chr4_4:70557176-70557195 | Msa0699780:intron | 45.0% | |
| GACTCATTCAGGGGATTCAA+GGG | - | chr4_4:70557177-70557196 | Msa0699780:intron | 45.0% | |
| ACTCATTCAGGGGATTCAAG+GGG | - | chr4_4:70557178-70557197 | Msa0699780:intron | 45.0% | |
| !! | GAGAGTTTGAGGGGTTTTGA+AGG | - | chr4_4:70557211-70557230 | Msa0699780:intron | 45.0% |
| TTCTCTCAAGCCTGCTTTGA+AGG | + | chr4_4:70557414-70557433 | None:intergenic | 45.0% | |
| TTCAAAGCAGGCTTGAGAGA+AGG | - | chr4_4:70557413-70557432 | Msa0699780:intron | 45.0% | |
| GAGAAGGTCTGATCTTTCCA+AGG | - | chr4_4:70557429-70557448 | Msa0699780:intron | 45.0% | |
| !! | ACCCTTTGAAAGTGTCTCCT+TGG | + | chr4_4:70557449-70557468 | None:intergenic | 45.0% |
| AACAGGAAGCAAACTCTTGC+AGG | + | chr4_4:70557593-70557612 | None:intergenic | 45.0% | |
| CCAGAAGAAGCTCATCAAAC+CGG | - | chr4_4:70557765-70557784 | Msa0699780:intron | 45.0% | |
| CAGAAGAAGCTCATCAAACC+GGG | - | chr4_4:70557766-70557785 | Msa0699780:intron | 45.0% | |
| TGTATTTCCGTGGTACCAGA+AGG | + | chr4_4:70557808-70557827 | None:intergenic | 45.0% | |
| AAGAGCTTGATTGTGTGAGG+AGG | - | chr4_4:70557929-70557948 | Msa0699780:intron | 45.0% | |
| ATCTGATTGCAGGCTTCTGA+AGG | + | chr4_4:70558045-70558064 | None:intergenic | 45.0% | |
| CCTACTAACTCAAATGCTGC+AGG | + | chr4_4:70558153-70558172 | None:intergenic | 45.0% | |
| ! | CCTGCAGCATTTGAGTTAGT+AGG | - | chr4_4:70558150-70558169 | Msa0699780:intron | 45.0% |
| ATGACACTGTGTCCTAGCAA+TGG | - | chr4_4:70558929-70558948 | Msa0699780:CDS | 45.0% | |
| !! | TGAAGCATCGACACAAACAC+GGG | - | chr4_4:70559005-70559024 | Msa0699780:CDS | 45.0% |
| AGTGTTTGCATGTGAGTGTC+TGG | + | chr4_4:70559033-70559052 | None:intergenic | 45.0% | |
| GTTGTGTCATCTTGGGTAGA+AGG | - | chr4_4:70559149-70559168 | Msa0699780:CDS | 45.0% | |
| CCCATCCAAAGAAGACATCA+AGG | - | chr4_4:70559469-70559488 | Msa0699780:CDS | 45.0% | |
| GCCTTGATGTCTTCTTTGGA+TGG | + | chr4_4:70559473-70559492 | None:intergenic | 45.0% | |
| ! | GGTAGCCTTGATGTCTTCTT+TGG | + | chr4_4:70559477-70559496 | None:intergenic | 45.0% |
| GCAGCTTTACTAAGCAAAGG+TGG | - | chr4_4:70559536-70559555 | Msa0699780:CDS | 45.0% | |
| !! | GGAGAGCATTGTTCGGATAA+AGG | - | chr4_4:70559571-70559590 | Msa0699780:CDS | 45.0% |
| ! | GAGCATTGTTCGGATAAAGG+AGG | - | chr4_4:70559574-70559593 | Msa0699780:CDS | 45.0% |
| AAACCAAGGCAGATGAAGCA+AGG | - | chr4_4:70559615-70559634 | Msa0699780:CDS | 45.0% | |
| ACTCTGTCTGAATGATACCG+AGG | - | chr4_4:70559718-70559737 | Msa0699780:CDS | 45.0% | |
| !! | TGATGGTTTGTTGGCGAGAA+TGG | - | chr4_4:70559832-70559851 | Msa0699780:CDS | 45.0% |
| GTTCATCTCCCTCTCTCACT+TGG | - | chr4_4:70556247-70556266 | Msa0699780:three_prime_UTR | 50.0% | |
| CAATCATGGCCAAGTGAGAG+AGG | + | chr4_4:70556259-70556278 | None:intergenic | 50.0% | |
| TCTCACTTGGCCATGATTGC+TGG | - | chr4_4:70556260-70556279 | Msa0699780:three_prime_UTR | 50.0% | |
| GATTCCGACATGGGTGGTAT+TGG | - | chr4_4:70556404-70556423 | Msa0699780:CDS | 50.0% | |
| GTTACCACCAGAAACCTGGT+TGG | + | chr4_4:70556435-70556454 | None:intergenic | 50.0% | |
| CTGAGTTACCACCAGAAACC+TGG | + | chr4_4:70556439-70556458 | None:intergenic | 50.0% | |
| !! | CAGGTTTCTGGTGGTAACTC+AGG | - | chr4_4:70556437-70556456 | Msa0699780:CDS | 50.0% |
| GAGACCAAAGGTTCAGACAC+TGG | - | chr4_4:70556679-70556698 | Msa0699780:CDS | 50.0% | |
| TGAGTAGTTGAAGGCCTGCT+AGG | + | chr4_4:70556800-70556819 | None:intergenic | 50.0% | |
| ! | CTAATGGCTCTGTGCATAGC+AGG | - | chr4_4:70556993-70557012 | Msa0699780:intron | 50.0% |
| GCTTTGGCAAATCCTGGAGA+TGG | - | chr4_4:70557043-70557062 | Msa0699780:intron | 50.0% | |
| GCAAATCCTGGAGATGGAAC+TGG | - | chr4_4:70557049-70557068 | Msa0699780:intron | 50.0% | |
| CTAACACCAGTTCCATCTCC+AGG | + | chr4_4:70557058-70557077 | None:intergenic | 50.0% | |
| GGACTGTCCAGCTTCTTGTA+CGG | - | chr4_4:70557508-70557527 | Msa0699780:intron | 50.0% | |
| TCTGGATGCCACAAACAGCA+TGG | + | chr4_4:70557750-70557769 | None:intergenic | 50.0% | |
| ! | CCGGTTTGATGAGCTTCTTC+TGG | + | chr4_4:70557768-70557787 | None:intergenic | 50.0% |
| CCAGAAGGTCCTTTCAAGCT+CGG | + | chr4_4:70557793-70557812 | None:intergenic | 50.0% | |
| GAAAGGACCTTCTGGTACCA+CGG | - | chr4_4:70557798-70557817 | Msa0699780:intron | 50.0% | |
| ! | GAGGATTTTCATGGGAAGCG+AGG | - | chr4_4:70557948-70557967 | Msa0699780:intron | 50.0% |
| ! | GCATTTGAGGTAGGAAGCGT+TGG | - | chr4_4:70558958-70558977 | Msa0699780:CDS | 50.0% |
| CAAGGCAGATGAAGCAAGGA+GGG | - | chr4_4:70559619-70559638 | Msa0699780:CDS | 50.0% | |
| CAGGACAAAGACTGCACAGA+TGG | - | chr4_4:70559667-70559686 | Msa0699780:CDS | 50.0% | |
| ATGATACCGAGGAAACGCAG+AGG | - | chr4_4:70559729-70559748 | Msa0699780:CDS | 50.0% | |
| TTTCCTCCTCTGCGTTTCCT+CGG | + | chr4_4:70559738-70559757 | None:intergenic | 50.0% | |
| GGAAACGCAGAGGAGGAAAT+TGG | - | chr4_4:70559739-70559758 | Msa0699780:CDS | 50.0% | |
| !! | TGGTTTGTTGGCGAGAATGG+AGG | - | chr4_4:70559835-70559854 | Msa0699780:CDS | 50.0% |
| TGGAGGCAACAAAGCAGCAT+TGG | - | chr4_4:70559852-70559871 | Msa0699780:CDS | 50.0% | |
| GGAGGCAACAAAGCAGCATT+GGG | - | chr4_4:70559853-70559872 | Msa0699780:CDS | 50.0% | |
| CTGAGAGATTCCGACATGGG+TGG | - | chr4_4:70556398-70556417 | Msa0699780:CDS | 55.0% | |
| ! | TCCGACATGGGTGGTATTGG+TGG | - | chr4_4:70556407-70556426 | Msa0699780:CDS | 55.0% |
| CCCACCAATACCACCCATGT+CGG | + | chr4_4:70556411-70556430 | None:intergenic | 55.0% | |
| !! | CCGACATGGGTGGTATTGGT+GGG | - | chr4_4:70556408-70556427 | Msa0699780:CDS | 55.0% |
| !! | TGGTATTGGTGGGTCCAACC+AGG | - | chr4_4:70556418-70556437 | Msa0699780:CDS | 55.0% |
| !! | CACTGGTGCCATGCTGTTTG+TGG | - | chr4_4:70557739-70557758 | Msa0699780:intron | 55.0% |
| AAACCGGGACCGAGCTTGAA+AGG | - | chr4_4:70557781-70557800 | Msa0699780:intron | 55.0% | |
| CCGAGCTTGAAAGGACCTTC+TGG | - | chr4_4:70557790-70557809 | Msa0699780:intron | 55.0% | |
| ATGGGAAGCGAGGATCGCAA+AGG | - | chr4_4:70557958-70557977 | Msa0699780:intron | 55.0% | |
| TGGGAAGCGAGGATCGCAAA+GGG | - | chr4_4:70557959-70557978 | Msa0699780:intron | 55.0% | |
| AAGCGAGGATCGCAAAGGGA+AGG | - | chr4_4:70557963-70557982 | Msa0699780:intron | 55.0% | |
| !! | CTTTGGAAGGCTGGCTTGAG+AGG | + | chr4_4:70559363-70559382 | None:intergenic | 55.0% |
| CTCTCAAGCCAGCCTTCCAA+AGG | - | chr4_4:70559361-70559380 | Msa0699780:CDS | 55.0% | |
| GAGACAGCGTGTCCTTTGGA+AGG | + | chr4_4:70559376-70559395 | None:intergenic | 55.0% | |
| GGAAGAGACAGCGTGTCCTT+TGG | + | chr4_4:70559380-70559399 | None:intergenic | 55.0% | |
| GTCTTCTTTGGATGGGGCAC+CGG | + | chr4_4:70559465-70559484 | None:intergenic | 55.0% | |
| CCTCCTTGCTTCATCTGCCT+TGG | + | chr4_4:70559621-70559640 | None:intergenic | 55.0% | |
| CCAAGGCAGATGAAGCAAGG+AGG | - | chr4_4:70559618-70559637 | Msa0699780:CDS | 55.0% | |
| ATACCGAGGAAACGCAGAGG+AGG | - | chr4_4:70559732-70559751 | Msa0699780:CDS | 55.0% | |
| GGTGGGTCCAACCAGGTTTC+TGG | - | chr4_4:70556425-70556444 | Msa0699780:CDS | 60.0% | |
| ! | GGGTCCAACCAGGTTTCTGG+TGG | - | chr4_4:70556428-70556447 | Msa0699780:CDS | 60.0% |
| GGTCCTTTCAAGCTCGGTCC+CGG | + | chr4_4:70557787-70557806 | None:intergenic | 60.0% | |
| ! | CAGCGTGTCCTTTGGAAGGC+TGG | + | chr4_4:70559372-70559391 | None:intergenic | 60.0% |
| !! | TTGGATGGGGCACCGGAATG+TGG | + | chr4_4:70559458-70559477 | None:intergenic | 60.0% |
| GGCAGATGAAGCAAGGAGGG+CGG | - | chr4_4:70559622-70559641 | Msa0699780:CDS | 60.0% | |
| AAGCAAGGAGGGCGGCAGAA+GGG | - | chr4_4:70559630-70559649 | Msa0699780:CDS | 60.0% | |
| GAAGCAAGGAGGGCGGCAGA+AGG | - | chr4_4:70559629-70559648 | Msa0699780:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 70556135 | 70560115 | 70556135 | ID=Msa0699780;Name=Msa0699780 |
| chr4_4 | mRNA | 70556135 | 70560115 | 70556135 | ID=Msa0699780-mRNA-1;Parent=Msa0699780;Name=Msa0699780-mRNA-1;_AED=0.00;_eAED=0.00;_QI=137|1|1|1|1|1|2|235|795 |
| chr4_4 | exon | 70556135 | 70556947 | 70556135 | ID=Msa0699780-mRNA-1:exon:21347;Parent=Msa0699780-mRNA-1 |
| chr4_4 | exon | 70558169 | 70560115 | 70558169 | ID=Msa0699780-mRNA-1:exon:21346;Parent=Msa0699780-mRNA-1 |
| chr4_4 | five_prime_UTR | 70559979 | 70560115 | 70559979 | ID=Msa0699780-mRNA-1:five_prime_utr;Parent=Msa0699780-mRNA-1 |
| chr4_4 | CDS | 70558169 | 70559978 | 70558169 | ID=Msa0699780-mRNA-1:cds;Parent=Msa0699780-mRNA-1 |
| chr4_4 | CDS | 70556370 | 70556947 | 70556370 | ID=Msa0699780-mRNA-1:cds;Parent=Msa0699780-mRNA-1 |
| chr4_4 | three_prime_UTR | 70556135 | 70556369 | 70556135 | ID=Msa0699780-mRNA-1:three_prime_utr;Parent=Msa0699780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
