AlfalfaGEDB | Msa1382670

M. sativa cultivar zhongmu-4 / Msa1382670

KEGG: K00611|K02725
GO: GO:0000502 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005839 GO:0005886 GO:0005911 GO:0006807 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009506 GO:0016020 GO:0019538 GO:0019773 GO:0030054 GO:0030163 GO:0032991 GO:0042221 GO:0043170 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046685 GO:0050896 GO:0055044 GO:0071704 GO:0071944 GO:1901564 GO:1901565 GO:1901575 GO:1902494 GO:1905368 GO:1905369
PFAM: PF10584.12

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1382670	XP_013466130.1	97.887	284	3	1	1	281	1	284	0.0	573

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1382670	sp\|O23712\|PSA1B_ARATH	78.445	283	53	2	1	281	1	277	6.40e-159	446

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1382670	I3RZQ6	97.887	284	3	1	1	281	1	284	0.0	573

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0003870	Msa1382670	0.871222	8.056401e-67	-8.615850e-47
Msa0007850	Msa1382670	0.819258	1.276536e-52	-8.615850e-47
Msa0008200	Msa1382670	0.812287	4.574524e-51	-8.615850e-47
Msa0033880	Msa1382670	0.836308	1.009572e-56	-8.615850e-47
Msa0047640	Msa1382670	0.816516	5.311987e-52	-8.615850e-47
Msa0056270	Msa1382670	0.817782	2.758621e-52	-8.615850e-47
Msa0068000	Msa1382670	0.805275	1.443854e-49	-8.615850e-47
Msa0068020	Msa1382670	0.812250	4.659272e-51	-8.615850e-47
Msa0077900	Msa1382670	0.807228	5.601508e-50	-8.615850e-47
Msa0093010	Msa1382670	0.823636	1.245165e-53	-8.615850e-47
Msa1349570	Msa1382670	0.802148	6.436483e-49	-8.615850e-47
Msa1352890	Msa1382670	0.804636	1.964645e-49	-8.615850e-47
Msa1356610	Msa1382670	0.816558	5.199338e-52	-8.615850e-47
Msa1369890	Msa1382670	0.846243	2.454771e-59	-8.615850e-47
Msa1374170	Msa1382670	0.998407	3.560925e-264	-8.615850e-47
Msa1382670	Msa1391480	0.817856	2.654101e-52	-8.615850e-47
Msa1382670	Msa1398790	0.818505	1.893082e-52	-8.615850e-47
Msa1382670	Msa1411950	0.808171	3.531061e-50	-8.615850e-47
Msa1382670	Msa1412110	0.819978	8.741568e-53	-8.615850e-47
Msa1382670	Msa1421560	0.823830	1.121498e-53	-8.615850e-47
Msa1382670	Msa1426370	0.839675	1.375056e-57	-8.615850e-47
Msa1382670	Msa1426490	0.812357	4.415161e-51	-8.615850e-47
Msa1382670	Msa1435440	0.809386	1.941193e-50	-8.615850e-47
Msa1382670	Msa1447890	0.803998	2.667022e-49	-8.615850e-47
Msa1382670	Msa1465260	0.805049	1.610555e-49	-8.615850e-47
Msa0607690	Msa1382670	0.807251	5.536497e-50	-8.615850e-47
Msa0615580	Msa1382670	0.809318	2.007512e-50	-8.615850e-47
Msa0633570	Msa1382670	0.824507	7.774205e-54	-8.615850e-47
Msa0644030	Msa1382670	0.809030	2.314529e-50	-8.615850e-47
Msa0662630	Msa1382670	0.819425	1.169199e-52	-8.615850e-47
Msa0689440	Msa1382670	0.828467	8.846300e-55	-8.615850e-47
Msa0705390	Msa1382670	0.800638	1.312056e-48	-8.615850e-47
Msa0729200	Msa1382670	0.807278	5.465510e-50	-8.615850e-47
Msa0769590	Msa1382670	0.810506	1.114394e-50	-8.615850e-47
Msa0785130	Msa1382670	0.810648	1.038214e-50	-8.615850e-47
Msa0800370	Msa1382670	0.814735	1.324118e-51	-8.615850e-47
Msa0806880	Msa1382670	0.805241	1.467727e-49	-8.615850e-47
Msa0126880	Msa1382670	0.817031	4.071131e-52	-8.615850e-47
Msa0127040	Msa1382670	0.809211	2.116464e-50	-8.615850e-47
Msa0127850	Msa1382670	0.837708	4.432793e-57	-8.615850e-47
Msa0142410	Msa1382670	0.821185	4.618713e-53	-8.615850e-47
Msa0144420	Msa1382670	0.861823	7.826305e-64	-8.615850e-47
Msa0144430	Msa1382670	0.869258	3.542162e-66	-8.615850e-47
Msa0146080	Msa1382670	0.831870	1.306240e-55	-8.615850e-47
Msa0146420	Msa1382670	0.928629	2.202860e-92	-8.615850e-47
Msa0149440	Msa1382670	0.824029	1.007238e-53	-8.615850e-47
Msa0174000	Msa1382670	0.830064	3.624174e-55	-8.615850e-47
Msa0179030	Msa1382670	0.802859	4.592462e-49	-8.615850e-47
Msa0218830	Msa1382670	0.806677	7.323462e-50	-8.615850e-47
Msa0231100	Msa1382670	0.803539	3.322590e-49	-8.615850e-47
Msa1258780	Msa1382670	0.828391	9.225730e-55	-8.615850e-47
Msa1262890	Msa1382670	0.808360	3.218387e-50	-8.615850e-47
Msa1298100	Msa1382670	0.880091	7.302170e-70	-8.615850e-47
Msa1330270	Msa1382670	0.830267	3.233790e-55	-8.615850e-47
Msa1331250	Msa1382670	0.804431	2.167874e-49	-8.615850e-47
Msa1336560	Msa1382670	0.813701	2.240184e-51	-8.615850e-47
Msa0460740	Msa1382670	0.800537	1.375609e-48	-8.615850e-47
Msa0471960	Msa1382670	0.814377	1.588844e-51	-8.615850e-47
Msa1039900	Msa1382670	0.802249	6.136433e-49	-8.615850e-47
Msa1042480	Msa1382670	0.807438	5.054975e-50	-8.615850e-47
Msa1043630	Msa1382670	0.978534	5.011541e-146	-8.615850e-47
Msa1070390	Msa1382670	0.811726	6.060180e-51	-8.615850e-47
Msa1072710	Msa1382670	0.826925	2.075317e-54	-8.615850e-47
Msa1074110	Msa1382670	0.825826	3.792962e-54	-8.615850e-47
Msa1078890	Msa1382670	0.801125	1.043302e-48	-8.615850e-47
Msa0241830	Msa1382670	0.820258	7.543425e-53	-8.615850e-47
Msa0244980	Msa1382670	0.822556	2.223408e-53	-8.615850e-47
Msa0245580	Msa1382670	0.860052	2.702773e-63	-8.615850e-47
Msa0262480	Msa1382670	0.831123	1.994941e-55	-8.615850e-47
Msa0269470	Msa1382670	0.833781	4.379345e-56	-8.615850e-47
Msa0279850	Msa1382670	0.806622	7.523445e-50	-8.615850e-47
Msa0283420	Msa1382670	0.801520	8.663608e-49	-8.615850e-47
Msa0284180	Msa1382670	0.813944	1.980295e-51	-8.615850e-47
Msa0296920	Msa1382670	0.809741	1.628488e-50	-8.615850e-47
Msa0300350	Msa1382670	0.816642	4.977838e-52	-8.615850e-47
Msa0322240	Msa1382670	0.803549	3.306644e-49	-8.615850e-47
Msa0322900	Msa1382670	0.818313	2.091908e-52	-8.615850e-47
Msa1109780	Msa1382670	-0.807762	4.315164e-50	-8.615850e-47
Msa1120790	Msa1382670	0.800360	1.495110e-48	-8.615850e-47
Msa1123350	Msa1382670	0.864535	1.133680e-64	-8.615850e-47
Msa1126830	Msa1382670	0.818959	1.492634e-52	-8.615850e-47
Msa1145240	Msa1382670	0.809549	1.791401e-50	-8.615850e-47
Msa1158230	Msa1382670	0.803061	4.171774e-49	-8.615850e-47
Msa1165270	Msa1382670	0.808609	2.847194e-50	-8.615850e-47
Msa1165780	Msa1382670	0.839667	1.381294e-57	-8.615850e-47
Msa1194230	Msa1382670	0.812901	3.356850e-51	-8.615850e-47
Msa1206650	Msa1382670	0.852261	5.185479e-61	-8.615850e-47
Msa1208020	Msa1382670	0.819639	1.044961e-52	-8.615850e-47
Msa0531650	Msa1382670	0.802500	5.448685e-49	-8.615850e-47
Msa0544540	Msa1382670	0.814003	1.921659e-51	-8.615850e-47
Msa0547990	Msa1382670	0.822731	2.024399e-53	-8.615850e-47
Msa0560500	Msa1382670	0.820697	5.979956e-53	-8.615850e-47
Msa0581110	Msa1382670	0.817481	3.225261e-52	-8.615850e-47
Msa0593700	Msa1382670	0.825910	3.621964e-54	-8.615850e-47
Msa0858440	Msa1382670	0.804477	2.120237e-49	-8.615850e-47
Msa0877530	Msa1382670	0.809815	1.569946e-50	-8.615850e-47
Msa0928120	Msa1382670	0.804736	1.871769e-49	-8.615850e-47
Msa0943170	Msa1382670	0.818247	2.165978e-52	-8.615850e-47
Msa0968440	Msa1382670	0.843154	1.668727e-58	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1382670	MtrunA17_Chr1g0155371	97.887	284	3	1	1	281	1	284	0.0	573
Msa1382670	MtrunA17_Chr4g0004521	87.179	273	21	2	20	281	7	276	7.44e-160	445
Msa1382670	MtrunA17_Chr4g0027841	75.102	245	52	4	1	241	83	322	1.49e-124	358
Msa1382670	MtrunA17_Chr3g0142511	86.826	167	20	1	115	281	25	189	3.28e-103	298
Msa1382670	MtrunA17_Chr1g0210811	45.902	183	94	2	1	178	3	185	5.95e-47	157
Msa1382670	MtrunA17_Chr7g0243311	38.785	214	125	3	5	214	4	215	3.09e-43	147
Msa1382670	MtrunA17_Chr5g0401801	42.135	178	99	2	5	178	4	181	5.98e-42	144
Msa1382670	MtrunA17_Chr0c02g0489661	35.111	225	141	3	1	223	1	222	1.70e-41	143
Msa1382670	MtrunA17_Chr6g0459741	40.838	191	108	3	6	193	8	196	7.94e-39	136
Msa1382670	MtrunA17_Chr2g0308541	34.348	230	145	5	6	230	9	237	1.26e-38	135
Msa1382670	MtrunA17_Chr8g0360781	35.217	230	143	5	6	230	9	237	1.76e-38	135
Msa1382670	MtrunA17_Chr8g0371571	37.736	212	123	4	5	210	3	211	6.47e-38	134
Msa1382670	MtrunA17_Chr2g0283841	35.681	213	128	4	4	210	2	211	3.37e-35	127

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1382670	AT1G47250.1	78.445	283	53	2	1	281	1	277	6.50e-160	446
Msa1382670	AT5G42790.1	86.134	238	33	0	1	238	1	238	6.88e-159	443
Msa1382670	AT1G53850.1	38.819	237	135	4	1	232	3	234	2.49e-46	155
Msa1382670	AT1G53850.2	38.819	237	135	4	1	232	3	234	2.49e-46	155
Msa1382670	AT3G14290.1	45.355	183	95	2	1	178	3	185	2.51e-46	155
Msa1382670	AT3G22110.1	36.017	236	141	4	5	232	4	237	2.50e-43	148
Msa1382670	AT1G16470.1	36.444	225	138	3	1	223	1	222	2.46e-40	140
Msa1382670	AT1G16470.2	36.444	225	138	3	1	223	1	222	2.46e-40	140
Msa1382670	AT1G79210.1	36.000	225	139	3	1	223	1	222	7.40e-40	139
Msa1382670	AT1G79210.2	36.000	225	139	3	1	223	1	222	7.40e-40	139
Msa1382670	AT1G79210.3	36.000	225	139	3	1	223	1	222	7.40e-40	139
Msa1382670	AT5G35590.1	34.348	230	145	5	6	230	9	237	2.00e-38	135
Msa1382670	AT5G66140.1	38.208	212	122	4	5	210	3	211	4.19e-37	132
Msa1382670	AT2G05840.1	34.348	230	145	5	6	230	9	237	4.44e-37	132
Msa1382670	AT3G51260.1	37.264	212	124	4	5	210	3	211	5.66e-36	129
Msa1382670	AT3G51260.2	37.264	212	124	4	5	210	3	211	6.60e-36	129
Msa1382670	AT2G05840.2	36.181	199	123	3	6	200	9	207	1.44e-35	127
Msa1382670	AT2G27020.1	37.895	190	115	2	6	193	8	196	8.34e-35	126
Msa1382670	AT2G05840.3	36.170	188	116	3	6	189	9	196	1.21e-33	122
Msa1382670	AT2G27020.2	37.895	190	115	2	6	193	110	298	1.81e-33	125
Msa1382670	AT4G15165.1	33.654	208	87	7	5	204	4	168	2.40e-25	100

Find 104 sgRNAs with CRISPR-Local

Find 268 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GATACTATTTACTGAAATTC+TGG	0.213745	tig0020520:-123097	Msa1382670:three_prime_UTR
TGGTGAGCCTTTCCACATTT+TGG	0.215333	tig0020520:-123498	Msa1382670:CDS
CGCGAGAACCACGTGAGTTT+TGG	0.220139	tig0020520:+126571	None:intergenic
ACAAGCTGCAAAGACATATT+TGG	0.303194	tig0020520:-123651	Msa1382670:CDS
TCCTGCTCAGCTGCAGCCTC+AGG	0.321152	tig0020520:+123404	None:intergenic
TAACCTAACCTGAGCCTTAT+CGG	0.340591	tig0020520:+126352	None:intergenic
ACTGTTATTTGAAAATGAAT+AGG	0.340974	tig0020520:-123267	Msa1382670:three_prime_UTR
GCTGCCACAGATCAGGCTTC+TGG	0.352014	tig0020520:-123380	Msa1382670:CDS
CGATCATGGAAGCGTCCTTA+TGG	0.372743	tig0020520:-123782	Msa1382670:CDS
ATGAGAAGATAGTTCAGAAT+TGG	0.382855	tig0020520:+126535	None:intergenic
GTAGCTGGATTAGATGAATC+AGG	0.390011	tig0020520:-123746	Msa1382670:CDS
TAAACAAAAGGAAAAGGAAA+AGG	0.398972	tig0020520:-126771	Msa1382670:five_prime_UTR
GGCGTTGGACTTCTAGTAGC+TGG	0.403744	tig0020520:-123761	Msa1382670:CDS
AAAGAGTAAACAAAAGGAAA+AGG	0.406910	tig0020520:-126777	Msa1382670:five_prime_UTR
CGCTTGGGCAGTTGTAATAG+AGG	0.407257	tig0020520:+123717	None:intergenic
GCTGCAGCCTCAGGTTCAGC+AGG	0.411570	tig0020520:+123413	None:intergenic
TATCAACAATCGGGTCCCTT+TGG	0.415540	tig0020520:-123031	Msa1382670:three_prime_UTR
TATTTCTTAATATCAACAAT+CGG	0.423419	tig0020520:-123041	Msa1382670:three_prime_UTR
ACCTGAGGCTGCAGCTGAGC+AGG	0.426509	tig0020520:-123405	Msa1382670:CDS
CTGGATAAAATGTTGATTGA+AGG	0.429409	tig0020520:-123078	Msa1382670:three_prime_UTR
TCATCAGAAGAAGATCTTCA+AGG	0.432131	tig0020520:-126516	Msa1382670:CDS
TAGATAAAATTGTAAATAGT+AGG	0.434101	tig0020520:+123121	None:intergenic
GCAGGATGCTGCCACAGATC+AGG	0.446173	tig0020520:-123387	Msa1382670:CDS
TTAAATTATCAAATCTCCAT+TGG	0.446472	tig0020520:+123314	None:intergenic
AAGCAAGGTTCAGCAGCAAT+AGG	0.446969	tig0020520:-126602	Msa1382670:CDS
ACCGGCGGGAAGACTCTTCC+AGG	0.447398	tig0020520:-126648	Msa1382670:CDS
CATCTTTGATCAGATCTTCC+CGG	0.448900	tig0020520:+123597	None:intergenic
CAGATCAAAGTGGTGCTGGT+GGG	0.452356	tig0020520:-123355	Msa1382670:CDS
GCCGATCACAAAATCAAAAT+CGG	0.458938	tig0020520:-126714	Msa1382670:five_prime_UTR
CCTTGCAAGGTGAAAAGCTC+AGG	0.463589	tig0020520:-123553	Msa1382670:CDS
GCATTCAGATCTCATGTAAC+GGG	0.468182	tig0020520:+126436	None:intergenic
GATCAGATCTTCCCGGGAGG+AGG	0.468370	tig0020520:+123604	None:intergenic
TGGATAAAATGTTGATTGAA+GGG	0.470632	tig0020520:-123077	Msa1382670:three_prime_UTR
ACGGCCATCGGCGGTGAGAC+CGG	0.470971	tig0020520:+126466	None:intergenic
GGTGCTGGTGGGGCTGACCA+AGG	0.471608	tig0020520:-123344	Msa1382670:CDS
ATTTCTTAATATCAACAATC+GGG	0.480176	tig0020520:-123040	Msa1382670:three_prime_UTR
GCAGATCAAAGTGGTGCTGG+TGG	0.482449	tig0020520:-123356	Msa1382670:CDS
CGTCGTTCAGCTCGCCGATA+AGG	0.485800	tig0020520:-126366	Msa1382670:CDS
ATTCAAAATAGTTTCCGCTT+GGG	0.489662	tig0020520:+123702	None:intergenic
ACTAGAAGTCCAACGCCATA+AGG	0.491926	tig0020520:+123767	None:intergenic
AGGTTTGCACTCAGCGATCA+TGG	0.494067	tig0020520:-123796	Msa1382670:CDS
TAAAGAAAAGAGTAAACAAA+AGG	0.496946	tig0020520:-126783	Msa1382670:five_prime_UTR
ACAACTTCACAGCCTCCTCC+CGG	0.497935	tig0020520:-123616	Msa1382670:CDS
GAATATCAGGCATTTGCAAT+CGG	0.498552	tig0020520:-123683	Msa1382670:CDS
CTTCCATGGCGTATTCCACC+TGG	0.500589	tig0020520:+126630	None:intergenic
TATTCAAAATAGTTTCCGCT+TGG	0.508568	tig0020520:+123701	None:intergenic
ACCATTGCTGTGGTTGGAGT+TGG	0.514251	tig0020520:-123518	Msa1382670:CDS
AAATTGTAAATAGTAGGTTC+AGG	0.514635	tig0020520:+123127	None:intergenic
TTCAAGGTTGATGATCATAT+CGG	0.515192	tig0020520:-126500	Msa1382670:CDS
ATCTTTGATCAGATCTTCCC+GGG	0.521887	tig0020520:+123598	None:intergenic
TTGTTTCTGAAATTCATCCA+TGG	0.524273	tig0020520:-123180	Msa1382670:three_prime_UTR
AAGATGCACTCATTGCAACT+AGG	0.529448	tig0020520:-123580	Msa1382670:CDS
AGATCAAAGTGGTGCTGGTG+GGG	0.531118	tig0020520:-123354	Msa1382670:CDS
GGTGCAGATCAAAGTGGTGC+TGG	0.531835	tig0020520:-123359	Msa1382670:CDS
TTTCAAGTTGAGTGTGTCAT+GGG	0.533952	tig0020520:-123244	Msa1382670:three_prime_UTR
TGGAAGCGTCCTTATGGCGT+TGG	0.534162	tig0020520:-123776	Msa1382670:CDS
AACCACAGCAATGGTGCATA+CGG	0.536605	tig0020520:+123526	None:intergenic
CTCTATTACAACTGCCCAAG+CGG	0.540260	tig0020520:-123716	Msa1382670:CDS
ACGAGTCTACCAACGGGAAG+CGG	0.541672	tig0020520:+126386	None:intergenic
GTTTCAAGTTGAGTGTGTCA+TGG	0.550390	tig0020520:-123245	Msa1382670:three_prime_UTR
AGATGCACTCATTGCAACTA+GGG	0.552459	tig0020520:-123579	Msa1382670:CDS
TCAGCTCGCCGATAAGGCTC+AGG	0.552948	tig0020520:-126360	Msa1382670:intron
CATATCGGCGTTGCCATCGC+CGG	0.553468	tig0020520:-126485	Msa1382670:CDS
AATCGAAACAATGTACCAAA+GGG	0.553783	tig0020520:+123016	None:intergenic
GTATGCACCATTGCTGTGGT+TGG	0.557714	tig0020520:-123524	Msa1382670:CDS
ATCGCCGGTCTCACCGCCGA+TGG	0.557766	tig0020520:-126470	Msa1382670:CDS
ACCTTGCTTAACTGCTTCCA+TGG	0.560856	tig0020520:+126616	None:intergenic
TGCATTCAGATCTCATGTAA+CGG	0.564752	tig0020520:+126435	None:intergenic
CGACGTAACAACATGGTCAC+CGG	0.568536	tig0020520:-126666	Msa1382670:CDS
AATTTAAGATCCAGTACTTG+AGG	0.570467	tig0020520:-123298	Msa1382670:three_prime_UTR
AAATCGAAACAATGTACCAA+AGG	0.571051	tig0020520:+123015	None:intergenic
TGAACGACGAGTCTACCAAC+GGG	0.572203	tig0020520:+126380	None:intergenic
TAGCTGGATTAGATGAATCA+GGG	0.572392	tig0020520:-123745	Msa1382670:CDS
ACGGGAAAGAACACGGCCAT+CGG	0.576909	tig0020520:+126454	None:intergenic
CAGTTTCCTGATCCAAAATG+TGG	0.582560	tig0020520:+123486	None:intergenic
TATGAATCTCCGCTTCCCGT+TGG	0.585267	tig0020520:-126395	Msa1382670:CDS
AGCTGCACCTGCTGAACCTG+AGG	0.586152	tig0020520:-123420	Msa1382670:CDS
GGATAAAATGTTGATTGAAG+GGG	0.586164	tig0020520:-123076	Msa1382670:three_prime_UTR
CAACTTCACAGCCTCCTCCC+GGG	0.586785	tig0020520:-123615	Msa1382670:CDS
TGACCAAGGTGGTTCTCCAA+TGG	0.586988	tig0020520:-123330	Msa1382670:CDS
ATCGGCGGTGAGACCGGCGA+TGG	0.592757	tig0020520:+126472	None:intergenic
TCCTGATCCAAAATGTGGAA+AGG	0.593184	tig0020520:+123491	None:intergenic
ACCAACTCCAACCACAGCAA+TGG	0.594452	tig0020520:+123517	None:intergenic
AAGTTCACAGTGATCAGCCA+TGG	0.599270	tig0020520:+123163	None:intergenic
GCTGGTGGGGCTGACCAAGG+TGG	0.603851	tig0020520:-123341	Msa1382670:CDS
CTTCCAGGTGGAATACGCCA+TGG	0.612270	tig0020520:-126633	Msa1382670:CDS
CTCCGTATGCACCATTGCTG+TGG	0.615712	tig0020520:-123528	Msa1382670:CDS
GCAACTAGGGAGTCCTTGCA+AGG	0.618439	tig0020520:-123566	Msa1382670:CDS
TCTCCATTGGAGAACCACCT+TGG	0.619130	tig0020520:+123327	None:intergenic
ACCTGGAAGAGTCTTCCCGC+CGG	0.625765	tig0020520:+126647	None:intergenic
GTAACAACATGGTCACCGGC+GGG	0.626802	tig0020520:-126662	Msa1382670:CDS
CGTAACAACATGGTCACCGG+CGG	0.638962	tig0020520:-126663	Msa1382670:CDS
GGAAAGAACACGGCCATCGG+CGG	0.645115	tig0020520:+126457	None:intergenic
TGCACCAGAAGCCTGATCTG+TGG	0.645294	tig0020520:+123376	None:intergenic
TCATGTAACGGGAAAGAACA+CGG	0.645339	tig0020520:+126447	None:intergenic
CTGAACGACGAGTCTACCAA+CGG	0.653690	tig0020520:+126379	None:intergenic
ACGATACCGACGTAACAACA+TGG	0.654506	tig0020520:-126673	Msa1382670:CDS
GCCATGGAAGCAGTTAAGCA+AGG	0.656151	tig0020520:-126617	Msa1382670:CDS
AGCTGGATTAGATGAATCAG+GGG	0.660204	tig0020520:-123744	Msa1382670:CDS
CGGTGACCATGTTGTTACGT+CGG	0.692398	tig0020520:+126667	None:intergenic
GCTTCTGGTGCAGATCAAAG+TGG	0.697173	tig0020520:-123365	Msa1382670:CDS
GGCGGGAAGACTCTTCCAGG+TGG	0.706418	tig0020520:-126645	Msa1382670:CDS
TCTCCGATCCAAAACTCACG+TGG	0.728289	tig0020520:-126579	Msa1382670:CDS
TTTGATCAGATCTTCCCGGG+AGG	0.729135	tig0020520:+123601	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	GTTAAATTAAGTAATTTTAA+TGG	-	tig0020520:123576-123595	Msa1382670:CDS	10.0%
!!	AAATAATAACAAAATCAAAC+AGG	+	tig0020520:124309-124328	None:intergenic	15.0%
!!!	ACTATTTTGTATACTTAATA+TGG	-	tig0020520:124788-124807	Msa1382670:intron	15.0%
!!	ATTCAATAAACTAAAACATT+TGG	-	tig0020520:125770-125789	Msa1382670:intron	15.0%
!!	TAGATAAAATTGTAAATAGT+AGG	+	tig0020520:126684-126703	None:intergenic	15.0%
!!	TATTTCTTAATATCAACAAT+CGG	-	tig0020520:126761-126780	Msa1382670:five_prime_UTR	15.0%
!!	TAAAGAAAAGAGTAAACAAA+AGG	-	tig0020520:123019-123038	Msa1382670:three_prime_UTR	20.0%
!!	TTTAACTCAGTAATTCAATT+AGG	-	tig0020520:123554-123573	Msa1382670:CDS	20.0%
!!	AAATACAGTGTTAACAAAAA+GGG	+	tig0020520:123723-123742	None:intergenic	20.0%
!!	AAACATTAGAGAATACATTT+CGG	+	tig0020520:124131-124150	None:intergenic	20.0%
!!	TTCTCTAATGTTTACTATAT+AGG	-	tig0020520:124138-124157	Msa1382670:intron	20.0%
!!	ATATAGAAACAGCATAAATA+GGG	+	tig0020520:125715-125734	None:intergenic	20.0%
!!	TATATAGAAACAGCATAAAT+AGG	+	tig0020520:125716-125735	None:intergenic	20.0%
!!!	GTGTTTTATTAATAGAAAGT+TGG	-	tig0020520:125843-125862	Msa1382670:intron	20.0%
!!	ATATTACATGGAAAAGAATA+AGG	-	tig0020520:125912-125931	Msa1382670:intron	20.0%
!!	CAAAATTACATCATAAATAC+TGG	+	tig0020520:125980-125999	None:intergenic	20.0%
!!!	ATTTATGATGTAATTTTGAG+TGG	-	tig0020520:125982-126001	Msa1382670:intron	20.0%
!!	TTAAATTATCAAATCTCCAT+TGG	+	tig0020520:126491-126510	None:intergenic	20.0%
!!!	ACTGTTATTTGAAAATGAAT+AGG	-	tig0020520:126535-126554	Msa1382670:CDS	20.0%
!!	ATTTCTTAATATCAACAATC+GGG	-	tig0020520:126762-126781	Msa1382670:five_prime_UTR	20.0%
!	AAAGAGTAAACAAAAGGAAA+AGG	-	tig0020520:123025-123044	Msa1382670:three_prime_UTR	25.0%
!	TAAACAAAAGGAAAAGGAAA+AGG	-	tig0020520:123031-123050	Msa1382670:three_prime_UTR	25.0%
!	TTGTTCGGATTATTCTAATT+AGG	-	tig0020520:123500-123519	Msa1382670:CDS	25.0%
!	TGTTCGGATTATTCTAATTA+GGG	-	tig0020520:123501-123520	Msa1382670:CDS	25.0%
!	TAGTCGAGATTATTTACTTT+AGG	-	tig0020520:123662-123681	Msa1382670:CDS	25.0%
!	CAAATACAGTGTTAACAAAA+AGG	+	tig0020520:123724-123743	None:intergenic	25.0%
!	TATTATTCATAAGCTTGTCA+AGG	-	tig0020520:123834-123853	Msa1382670:intron	25.0%
!	AAAAAATAAGCCAATCCAAA+CGG	-	tig0020520:123946-123965	Msa1382670:intron	25.0%
!!	TTTCAGTTTTCAACTTTTGT+TGG	-	tig0020520:123983-124002	Msa1382670:intron	25.0%
!!	AAACGTTTGAAACTATGTTT+AGG	-	tig0020520:124090-124109	Msa1382670:intron	25.0%
!	AAAATACTATGATGCTTCTA+TGG	-	tig0020520:124265-124284	Msa1382670:intron	25.0%
!!!	CATCAAAAAGAGTATGATTT+TGG	+	tig0020520:124534-124553	None:intergenic	25.0%
!!	ATCATACTCTTTTTGATGTT+TGG	-	tig0020520:124536-124555	Msa1382670:intron	25.0%
!	AGGTACAAAAATTATTTCAC+AGG	+	tig0020520:124616-124635	None:intergenic	25.0%
!	ATTTATATACTTCTGGGTAT+AGG	+	tig0020520:124708-124727	None:intergenic	25.0%
!	ACACACATTTATATACTTCT+GGG	+	tig0020520:124714-124733	None:intergenic	25.0%
!	TGTATACTTAATATGGAAGT+AGG	-	tig0020520:124795-124814	Msa1382670:intron	25.0%
!	GTATACTTAATATGGAAGTA+GGG	-	tig0020520:124796-124815	Msa1382670:intron	25.0%
!!!	TGTAAATGTTGTTTTGATAG+TGG	-	tig0020520:124889-124908	Msa1382670:intron	25.0%
!!!	TGACAGTCATTTTGTATTTA+AGG	+	tig0020520:125151-125170	None:intergenic	25.0%
!!	TGATTTGACTTAACTCTTAT+TGG	-	tig0020520:125620-125639	Msa1382670:intron	25.0%
!!	GATTTGACTTAACTCTTATT+GGG	-	tig0020520:125621-125640	Msa1382670:intron	25.0%
!!!	TAAAGTGTTAACAACACTTT+TGG	-	tig0020520:125677-125696	Msa1382670:intron	25.0%
!	TATAGAAACAGCATAAATAG+GGG	+	tig0020520:125714-125733	None:intergenic	25.0%
!	TTGAATGAATTAAATAGACC+AGG	+	tig0020520:125756-125775	None:intergenic	25.0%
!!	ATTTGGTTAGTTAATCAACA+TGG	-	tig0020520:125787-125806	Msa1382670:intron	25.0%
!	TTATTAATAGAAAGTTGGAC+AGG	-	tig0020520:125848-125867	Msa1382670:intron	25.0%
!	TATTAATAGAAAGTTGGACA+GGG	-	tig0020520:125849-125868	Msa1382670:intron	25.0%
!	AAATTGTAAATAGTAGGTTC+AGG	+	tig0020520:126678-126697	None:intergenic	25.0%
!	GATACTATTTACTGAAATTC+TGG	-	tig0020520:126705-126724	Msa1382670:exon	25.0%
!!	TGGATAAAATGTTGATTGAA+GGG	-	tig0020520:126725-126744	Msa1382670:five_prime_UTR	25.0%
!!!	TCCGATTTTGATTTTGTGAT+CGG	+	tig0020520:123092-123111	None:intergenic	30.0%
	ATGAGAAGATAGTTCAGAAT+TGG	+	tig0020520:123270-123289	None:intergenic	30.0%
!!	TTCAAGGTTGATGATCATAT+CGG	-	tig0020520:123302-123321	Msa1382670:three_prime_UTR	30.0%
!!!	AATTGTAGCTAGGGTTTTTT+AGG	-	tig0020520:123530-123549	Msa1382670:CDS	30.0%
!!!	ATTGTAGCTAGGGTTTTTTA+GGG	-	tig0020520:123531-123550	Msa1382670:CDS	30.0%
!!	GATTTGATTTGTTATGCTTG+TGG	-	tig0020520:123620-123639	Msa1382670:CDS	30.0%
	TGACAGTGATTAGAATGAAA+TGG	-	tig0020520:123742-123761	Msa1382670:CDS	30.0%
	GACAGTGATTAGAATGAAAT+GGG	-	tig0020520:123743-123762	Msa1382670:CDS	30.0%
	CAAAAATAAGCCAATCCAAA+TGG	+	tig0020520:123786-123805	None:intergenic	30.0%
	AAAAATAAGCCAATCCAAAC+GGG	-	tig0020520:123947-123966	Msa1382670:intron	30.0%
	TAATTGTGATTGAGAGAAGA+TGG	-	tig0020520:124039-124058	Msa1382670:intron	30.0%
!!	ATCTAGAGGGAGTATATTTT+CGG	-	tig0020520:124067-124086	Msa1382670:intron	30.0%
	TTGAATGTCTTGAGAATTTG+AGG	-	tig0020520:124327-124346	Msa1382670:intron	30.0%
!!!	GAGAATTTGAGGTTTTTAGT+TGG	-	tig0020520:124338-124357	Msa1382670:intron	30.0%
!!	GTATGATTTTGGCAAAATCA+CGG	+	tig0020520:124523-124542	None:intergenic	30.0%
!	CTTTTTGATGTTTGGTTGTT+TGG	-	tig0020520:124544-124563	Msa1382670:intron	30.0%
	CACACACATTTATATACTTC+TGG	+	tig0020520:124715-124734	None:intergenic	30.0%
!	CAGAAGTATATAAATGTGTG+TGG	-	tig0020520:124713-124732	Msa1382670:intron	30.0%
!!	ATCACTTTTGAGCTGTTATT+TGG	-	tig0020520:124760-124779	Msa1382670:intron	30.0%
	CATATGATAGAGATTAGAGA+CGG	-	tig0020520:124943-124962	Msa1382670:intron	30.0%
	TACGGTGTAGTTATTCAAAT+TGG	-	tig0020520:124974-124993	Msa1382670:intron	30.0%
	ACGGTGTAGTTATTCAAATT+GGG	-	tig0020520:124975-124994	Msa1382670:intron	30.0%
!!	TGTTTTGTTACGATCCATTA+TGG	-	tig0020520:125040-125059	Msa1382670:intron	30.0%
	TATCTTACTTTCATTCTCTG+TGG	-	tig0020520:125108-125127	Msa1382670:intron	30.0%
	TGATTTACTTAGCATTGTAG+TGG	-	tig0020520:125249-125268	Msa1382670:intron	30.0%
!!!	GTTGTTTTAGTTGTTATCTC+AGG	-	tig0020520:125452-125471	Msa1382670:intron	30.0%
!!	TAACTTGCTTGTAGAATAAC+TGG	-	tig0020520:125542-125561	Msa1382670:intron	30.0%
	ATAGTTACTATATGTGAACC+TGG	-	tig0020520:125735-125754	Msa1382670:intron	30.0%
	ATCTTGTCTTGCATATTACA+TGG	-	tig0020520:125900-125919	Msa1382670:intron	30.0%
	ATTCAAAATAGTTTCCGCTT+GGG	+	tig0020520:126103-126122	None:intergenic	30.0%
	TATTCAAAATAGTTTCCGCT+TGG	+	tig0020520:126104-126123	None:intergenic	30.0%
!!	CGGAAACTATTTTGAATATC+AGG	-	tig0020520:126106-126125	Msa1382670:intron	30.0%
!!!	TTGATACTTTTGAGATTGTG+AGG	-	tig0020520:126351-126370	Msa1382670:intron	30.0%
!!!	TGATACTTTTGAGATTGTGA+GGG	-	tig0020520:126352-126371	Msa1382670:intron	30.0%
!	AATTTAAGATCCAGTACTTG+AGG	-	tig0020520:126504-126523	Msa1382670:CDS	30.0%
!!	TTGTTTCTGAAATTCATCCA+TGG	-	tig0020520:126622-126641	Msa1382670:CDS	30.0%
!	CTGGATAAAATGTTGATTGA+AGG	-	tig0020520:126724-126743	Msa1382670:five_prime_UTR	30.0%
!	GGATAAAATGTTGATTGAAG+GGG	-	tig0020520:126726-126745	Msa1382670:five_prime_UTR	30.0%
	AATCGAAACAATGTACCAAA+GGG	+	tig0020520:126789-126808	None:intergenic	30.0%
	AAATCGAAACAATGTACCAA+AGG	+	tig0020520:126790-126809	None:intergenic	30.0%
	GCCGATCACAAAATCAAAAT+CGG	-	tig0020520:123088-123107	Msa1382670:three_prime_UTR	35.0%
	TCATCAGAAGAAGATCTTCA+AGG	-	tig0020520:123286-123305	Msa1382670:three_prime_UTR	35.0%
	TGCATTCAGATCTCATGTAA+CGG	+	tig0020520:123370-123389	None:intergenic	35.0%
	ACAGAGGTAAAAACGGAAAA+CGG	+	tig0020520:123480-123499	None:intergenic	35.0%
	CGAACAAACAGAGGTAAAAA+CGG	+	tig0020520:123487-123506	None:intergenic	35.0%
!	CGTTTTTACCTCTGTTTGTT+CGG	-	tig0020520:123485-123504	Msa1382670:CDS	35.0%
	AGAATAATCCGAACAAACAG+AGG	+	tig0020520:123496-123515	None:intergenic	35.0%
!!!	AGGGTTTTGAAATTGTAGCT+AGG	-	tig0020520:123520-123539	Msa1382670:CDS	35.0%
!!!	GGGTTTTGAAATTGTAGCTA+GGG	-	tig0020520:123521-123540	Msa1382670:CDS	35.0%
!!	ACTTTAGGATCTTAACTGAG+TGG	-	tig0020520:123677-123696	Msa1382670:CDS	35.0%
	CAGTGTTAACAAAAAGGGTT+TGG	+	tig0020520:123718-123737	None:intergenic	35.0%
	TGTAAGATTCAGTGTCCATT+TGG	-	tig0020520:123768-123787	Msa1382670:CDS	35.0%
	GAAAACTGAAACAGACACTA+AGG	+	tig0020520:123974-123993	None:intergenic	35.0%
!	AGTTTTCAACTTTTGTTGGC+TGG	-	tig0020520:123987-124006	Msa1382670:intron	35.0%
!	CTAATGACACGTTCTACTTT+TGG	+	tig0020520:124184-124203	None:intergenic	35.0%
!!	TCATTAGTTTCCTCTCCTTT+TGG	-	tig0020520:124197-124216	Msa1382670:intron	35.0%
!!	TCTCCTTTTGGTCTTTTTTG+CGG	-	tig0020520:124209-124228	Msa1382670:intron	35.0%
	TATGATGCTTCTATGGTGTT+TGG	-	tig0020520:124272-124291	Msa1382670:intron	35.0%
	CGGTAAGTTTGACAAAATCA+CGG	-	tig0020520:124452-124471	Msa1382670:intron	35.0%
	GGTAAGTTTGACAAAATCAC+GGG	-	tig0020520:124453-124472	Msa1382670:intron	35.0%
	ATATACTTCTGGGTATAGGT+TGG	+	tig0020520:124704-124723	None:intergenic	35.0%
	AGTTCCGTTGACATTCATTA+GGG	+	tig0020520:125014-125033	None:intergenic	35.0%
	GATCCATTATGGATGTTCTA+GGG	-	tig0020520:125051-125070	Msa1382670:intron	35.0%
	ATCCATTATGGATGTTCTAG+GGG	-	tig0020520:125052-125071	Msa1382670:intron	35.0%
	TTCACTTTCCCATTACTATG+AGG	+	tig0020520:125082-125101	None:intergenic	35.0%
	ATGTCATTCTTTGATGCATC+TGG	-	tig0020520:125182-125201	Msa1382670:intron	35.0%
!	TCTTCTCTTTCAAGGTTTTG+AGG	-	tig0020520:125209-125228	Msa1382670:intron	35.0%
	ATGCATAGAGAAATCCTGAA+GGG	-	tig0020520:125387-125406	Msa1382670:intron	35.0%
!!	ATGATGTAATTTTGAGTGGC+AGG	-	tig0020520:125986-126005	Msa1382670:intron	35.0%
!	TAGCTGGATTAGATGAATCA+GGG	-	tig0020520:126057-126076	Msa1382670:intron	35.0%
	GAATATCAGGCATTTGCAAT+CGG	-	tig0020520:126119-126138	Msa1382670:intron	35.0%
	ACAAGCTGCAAAGACATATT+TGG	-	tig0020520:126151-126170	Msa1382670:intron	35.0%
!	GTTTTTAACACCTCAAGTAC+TGG	+	tig0020520:126517-126536	None:intergenic	35.0%
!!	TTTCAAGTTGAGTGTGTCAT+GGG	-	tig0020520:126558-126577	Msa1382670:CDS	35.0%
!	TCATGTAACGGGAAAGAACA+CGG	+	tig0020520:123358-123377	None:intergenic	40.0%
	GCATTCAGATCTCATGTAAC+GGG	+	tig0020520:123369-123388	None:intergenic	40.0%
!	TAACCTAACCTGAGCCTTAT+CGG	+	tig0020520:123453-123472	None:intergenic	40.0%
	GATTCAGTGTCCATTTGGAT+TGG	-	tig0020520:123773-123792	Msa1382670:CDS	40.0%
	AGAAGATGGAAGCAATCTAG+AGG	-	tig0020520:124053-124072	Msa1382670:intron	40.0%
	GAAGATGGAAGCAATCTAGA+GGG	-	tig0020520:124054-124073	Msa1382670:intron	40.0%
	GCAAAAAAGACCAAAAGGAG+AGG	+	tig0020520:124210-124229	None:intergenic	40.0%
!!	CTCCTTTTGGTCTTTTTTGC+GGG	-	tig0020520:124210-124229	Msa1382670:intron	40.0%
!!	TCCTTTTGGTCTTTTTTGCG+GGG	-	tig0020520:124211-124230	Msa1382670:intron	40.0%
!	TCATAGTATTTTGCCTACCC+AGG	+	tig0020520:124257-124276	None:intergenic	40.0%
!!!	GTTTGCTGACTCTTGTTTTC+TGG	-	tig0020520:124402-124421	Msa1382670:intron	40.0%
!!	GACTTGTTGCTTGTGTGAAA+TGG	-	tig0020520:124429-124448	Msa1382670:intron	40.0%
!	TTGTTGCTTGTGTGAAATGG+CGG	-	tig0020520:124432-124451	Msa1382670:intron	40.0%
	CGGTTGGCAAAAACTAAGTT+TGG	+	tig0020520:124503-124522	None:intergenic	40.0%
!!	GATTTTGGCAAAATCACGGT+TGG	+	tig0020520:124519-124538	None:intergenic	40.0%
	TGTCTTCTTGACAAACACGA+CGG	+	tig0020520:124639-124658	None:intergenic	40.0%
	TAATATGGAAGTAGGGAGAC+TGG	-	tig0020520:124803-124822	Msa1382670:intron	40.0%
	TTAGAGACGGAGTTAGACTA+CGG	-	tig0020520:124956-124975	Msa1382670:intron	40.0%
	TGCACCCTAATGAATGTCAA+CGG	-	tig0020520:125007-125026	Msa1382670:intron	40.0%
	CAGTTCCGTTGACATTCATT+AGG	+	tig0020520:125015-125034	None:intergenic	40.0%
	CGATCCATTATGGATGTTCT+AGG	-	tig0020520:125050-125069	Msa1382670:intron	40.0%
	TACCCCTAGAACATCCATAA+TGG	+	tig0020520:125057-125076	None:intergenic	40.0%
	CTTACTTTCATTCTCTGTGG+AGG	-	tig0020520:125111-125130	Msa1382670:intron	40.0%
!!!	TCTCTTTCAAGGTTTTGAGG+AGG	-	tig0020520:125212-125231	Msa1382670:intron	40.0%
!!!	CTCTTTCAAGGTTTTGAGGA+GGG	-	tig0020520:125213-125232	Msa1382670:intron	40.0%
	ATTGTCTAAACTGTCGTGAG+AGG	-	tig0020520:125311-125330	Msa1382670:intron	40.0%
	CATGCATAGAGAAATCCTGA+AGG	-	tig0020520:125386-125405	Msa1382670:intron	40.0%
	TGCATAGAGAAATCCTGAAG+GGG	-	tig0020520:125388-125407	Msa1382670:intron	40.0%
	TACGCTGTTGTGTTGTCTTA+TGG	-	tig0020520:125481-125500	Msa1382670:intron	40.0%
	TGTTGTCTTATGGTGTGAAG+TGG	-	tig0020520:125491-125510	Msa1382670:intron	40.0%
	TGTAGAATAACTGGCTGAAC+AGG	-	tig0020520:125551-125570	Msa1382670:intron	40.0%
	AAACAGCATAAATAGGGGAG+GGG	+	tig0020520:125709-125728	None:intergenic	40.0%
	GAAACAGCATAAATAGGGGA+GGG	+	tig0020520:125710-125729	None:intergenic	40.0%
	AGAAACAGCATAAATAGGGG+AGG	+	tig0020520:125711-125730	None:intergenic	40.0%
	TAATAGAAAGTTGGACAGGG+TGG	-	tig0020520:125852-125871	Msa1382670:intron	40.0%
	AATAGAAAGTTGGACAGGGT+GGG	-	tig0020520:125853-125872	Msa1382670:intron	40.0%
!	GTAGCTGGATTAGATGAATC+AGG	-	tig0020520:126056-126075	Msa1382670:intron	40.0%
!	AGCTGGATTAGATGAATCAG+GGG	-	tig0020520:126058-126077	Msa1382670:intron	40.0%
	ATCTTTGATCAGATCTTCCC+GGG	+	tig0020520:126207-126226	None:intergenic	40.0%
	CATCTTTGATCAGATCTTCC+CGG	+	tig0020520:126208-126227	None:intergenic	40.0%
	AAGATGCACTCATTGCAACT+AGG	-	tig0020520:126222-126241	Msa1382670:intron	40.0%
	AGATGCACTCATTGCAACTA+GGG	-	tig0020520:126223-126242	Msa1382670:intron	40.0%
	TCCTGATCCAAAATGTGGAA+AGG	+	tig0020520:126314-126333	None:intergenic	40.0%
	CAGTTTCCTGATCCAAAATG+TGG	+	tig0020520:126319-126338	None:intergenic	40.0%
!!!	TACTTTTGAGATTGTGAGGG+AGG	-	tig0020520:126355-126374	Msa1382670:intron	40.0%
!!	GTTTCAAGTTGAGTGTGTCA+TGG	-	tig0020520:126557-126576	Msa1382670:CDS	40.0%
	ACGATACCGACGTAACAACA+TGG	-	tig0020520:123129-123148	Msa1382670:three_prime_UTR	45.0%
	ACCTTGCTTAACTGCTTCCA+TGG	+	tig0020520:123189-123208	None:intergenic	45.0%
	AAGCAAGGTTCAGCAGCAAT+AGG	-	tig0020520:123200-123219	Msa1382670:three_prime_UTR	45.0%
!!!	GAACCACGTGAGTTTTGGAT+CGG	+	tig0020520:123229-123248	None:intergenic	45.0%
	CTTAACTGAGTGGCTCACTT+TGG	-	tig0020520:123687-123706	Msa1382670:CDS	45.0%
!!	CCTTTTGGTCTTTTTTGCGG+GGG	-	tig0020520:124212-124231	Msa1382670:intron	45.0%
	GTACAGAAGTTGTCCAACCT+GGG	-	tig0020520:124237-124256	Msa1382670:intron	45.0%
!	AGTATTTTGCCTACCCAGGT+TGG	+	tig0020520:124253-124272	None:intergenic	45.0%
	AGTGTCTCTGTTAGTGACTG+TGG	-	tig0020520:124364-124383	Msa1382670:intron	45.0%
	AGGGGTAGACCTCATAGTAA+TGG	-	tig0020520:125070-125089	Msa1382670:intron	45.0%
	GGGGTAGACCTCATAGTAAT+GGG	-	tig0020520:125071-125090	Msa1382670:intron	45.0%
	CTGGAACGTCTTCTCTTTCA+AGG	-	tig0020520:125201-125220	Msa1382670:intron	45.0%
!!	TAGTGGTCTATCGACTCGAT+AGG	-	tig0020520:125266-125285	Msa1382670:intron	45.0%
	AAACTGTCGTGAGAGGCTAT+TGG	-	tig0020520:125318-125337	Msa1382670:intron	45.0%
	GCATAGAGAAATCCTGAAGG+GGG	-	tig0020520:125389-125408	Msa1382670:intron	45.0%
!!	CAAAAGTATTAGCCCCCTTC+AGG	+	tig0020520:125404-125423	None:intergenic	45.0%
	AACAGCATAAATAGGGGAGG+GGG	+	tig0020520:125708-125727	None:intergenic	45.0%
	ACTAGAAGTCCAACGCCATA+AGG	+	tig0020520:126038-126057	None:intergenic	45.0%
	CTCTATTACAACTGCCCAAG+CGG	-	tig0020520:126086-126105	Msa1382670:intron	45.0%
	AACCACAGCAATGGTGCATA+CGG	+	tig0020520:126279-126298	None:intergenic	45.0%
!	TGGTGAGCCTTTCCACATTT+TGG	-	tig0020520:126304-126323	Msa1382670:intron	45.0%
!	GCCTTTCCACATTTTGGATC+AGG	-	tig0020520:126310-126329	Msa1382670:intron	45.0%
	AAGTTCACAGTGATCAGCCA+TGG	+	tig0020520:126642-126661	None:intergenic	45.0%
	TATCAACAATCGGGTCCCTT+TGG	-	tig0020520:126771-126790	Msa1382670:five_prime_UTR	45.0%
	CGGTGACCATGTTGTTACGT+CGG	+	tig0020520:123138-123157	None:intergenic	50.0%
	CGACGTAACAACATGGTCAC+CGG	-	tig0020520:123136-123155	Msa1382670:three_prime_UTR	50.0%
	GCCATGGAAGCAGTTAAGCA+AGG	-	tig0020520:123185-123204	Msa1382670:three_prime_UTR	50.0%
	TCTCCGATCCAAAACTCACG+TGG	-	tig0020520:123223-123242	Msa1382670:three_prime_UTR	50.0%
	TATGAATCTCCGCTTCCCGT+TGG	-	tig0020520:123407-123426	Msa1382670:CDS	50.0%
	TGAACGACGAGTCTACCAAC+GGG	+	tig0020520:123425-123444	None:intergenic	50.0%
	CTGAACGACGAGTCTACCAA+CGG	+	tig0020520:123426-123445	None:intergenic	50.0%
	CACTAAGGACCCGTTTGGAT+TGG	+	tig0020520:123959-123978	None:intergenic	50.0%
	ACAGACACTAAGGACCCGTT+TGG	+	tig0020520:123964-123983	None:intergenic	50.0%
	CCCCCGCAAAAAAGACCAAA+AGG	+	tig0020520:124215-124234	None:intergenic	50.0%
!!!	TTTGGTCTTTTTTGCGGGGG+AGG	-	tig0020520:124215-124234	Msa1382670:intron	50.0%
	GGTACAGAAGTTGTCCAACC+TGG	-	tig0020520:124236-124255	Msa1382670:intron	50.0%
	AGAAGTTGTCCAACCTGGGT+AGG	-	tig0020520:124241-124260	Msa1382670:intron	50.0%
	GTCTCTGTTAGTGACTGTGG+TGG	-	tig0020520:124367-124386	Msa1382670:intron	50.0%
	CTTCTTGACAAACACGACGG+AGG	+	tig0020520:124636-124655	None:intergenic	50.0%
!!!	GGTTTTGAGGAGGGAAACAG+TGG	-	tig0020520:125222-125241	Msa1382670:intron	50.0%
	AAAGTTGGACAGGGTGGGTA+TGG	-	tig0020520:125858-125877	Msa1382670:intron	50.0%
	AAGTTGGACAGGGTGGGTAT+GGG	-	tig0020520:125859-125878	Msa1382670:intron	50.0%
	AGGTTTGCACTCAGCGATCA+TGG	-	tig0020520:126006-126025	Msa1382670:intron	50.0%
!!	CGATCATGGAAGCGTCCTTA+TGG	-	tig0020520:126020-126039	Msa1382670:intron	50.0%
	CGCTTGGGCAGTTGTAATAG+AGG	+	tig0020520:126088-126107	None:intergenic	50.0%
	TTTGATCAGATCTTCCCGGG+AGG	+	tig0020520:126204-126223	None:intergenic	50.0%
!	CCTGAGCTTTTCACCTTGCA+AGG	+	tig0020520:126252-126271	None:intergenic	50.0%
	CCTTGCAAGGTGAAAAGCTC+AGG	-	tig0020520:126249-126268	Msa1382670:intron	50.0%
	GTATGCACCATTGCTGTGGT+TGG	-	tig0020520:126278-126297	Msa1382670:intron	50.0%
	ACCATTGCTGTGGTTGGAGT+TGG	-	tig0020520:126284-126303	Msa1382670:intron	50.0%
	ACCAACTCCAACCACAGCAA+TGG	+	tig0020520:126288-126307	None:intergenic	50.0%
	GCTTCTGGTGCAGATCAAAG+TGG	-	tig0020520:126437-126456	Msa1382670:CDS	50.0%
!!	CAGATCAAAGTGGTGCTGGT+GGG	-	tig0020520:126447-126466	Msa1382670:CDS	50.0%
!!	AGATCAAAGTGGTGCTGGTG+GGG	-	tig0020520:126448-126467	Msa1382670:CDS	50.0%
	TGACCAAGGTGGTTCTCCAA+TGG	-	tig0020520:126472-126491	Msa1382670:CDS	50.0%
	TCTCCATTGGAGAACCACCT+TGG	+	tig0020520:126478-126497	None:intergenic	50.0%
	CGTAACAACATGGTCACCGG+CGG	-	tig0020520:123139-123158	Msa1382670:three_prime_UTR	55.0%
	GTAACAACATGGTCACCGGC+GGG	-	tig0020520:123140-123159	Msa1382670:three_prime_UTR	55.0%
	CTTCCAGGTGGAATACGCCA+TGG	-	tig0020520:123169-123188	Msa1382670:three_prime_UTR	55.0%
	CTTCCATGGCGTATTCCACC+TGG	+	tig0020520:123175-123194	None:intergenic	55.0%
!	CGCGAGAACCACGTGAGTTT+TGG	+	tig0020520:123234-123253	None:intergenic	55.0%
	ACGGGAAAGAACACGGCCAT+CGG	+	tig0020520:123351-123370	None:intergenic	55.0%
	ACGAGTCTACCAACGGGAAG+CGG	+	tig0020520:123419-123438	None:intergenic	55.0%
	TCGCCGATAAGGCTCAGGTT+AGG	-	tig0020520:123447-123466	Msa1382670:CDS	55.0%
	GAAGTAGGGAGACTGGTGTG+CGG	-	tig0020520:124810-124829	Msa1382670:intron	55.0%
	AGTTGGACAGGGTGGGTATG+GGG	-	tig0020520:125860-125879	Msa1382670:intron	55.0%
!!	TGGAAGCGTCCTTATGGCGT+TGG	-	tig0020520:126026-126045	Msa1382670:intron	55.0%
!	GGCGTTGGACTTCTAGTAGC+TGG	-	tig0020520:126041-126060	Msa1382670:intron	55.0%
	ACAACTTCACAGCCTCCTCC+CGG	-	tig0020520:126186-126205	Msa1382670:intron	55.0%
	GCAACTAGGGAGTCCTTGCA+AGG	-	tig0020520:126236-126255	Msa1382670:intron	55.0%
	CTCCGTATGCACCATTGCTG+TGG	-	tig0020520:126274-126293	Msa1382670:intron	55.0%
	TGCACCAGAAGCCTGATCTG+TGG	+	tig0020520:126429-126448	None:intergenic	55.0%
	GGTGCAGATCAAAGTGGTGC+TGG	-	tig0020520:126443-126462	Msa1382670:CDS	55.0%
!	GCAGATCAAAGTGGTGCTGG+TGG	-	tig0020520:126446-126465	Msa1382670:CDS	55.0%
	ACCTGGAAGAGTCTTCCCGC+CGG	+	tig0020520:123158-123177	None:intergenic	60.0%
	CATATCGGCGTTGCCATCGC+CGG	-	tig0020520:123317-123336	Msa1382670:exon	60.0%
	GGAAAGAACACGGCCATCGG+CGG	+	tig0020520:123348-123367	None:intergenic	60.0%
	CGTCGTTCAGCTCGCCGATA+AGG	-	tig0020520:123436-123455	Msa1382670:CDS	60.0%
	TCAGCTCGCCGATAAGGCTC+AGG	-	tig0020520:123442-123461	Msa1382670:CDS	60.0%
	GTTGGACAGGGTGGGTATGG+GGG	-	tig0020520:125861-125880	Msa1382670:intron	60.0%
	TTGGACAGGGTGGGTATGGG+GGG	-	tig0020520:125862-125881	Msa1382670:intron	60.0%
	CAACTTCACAGCCTCCTCCC+GGG	-	tig0020520:126187-126206	Msa1382670:intron	60.0%
	GATCAGATCTTCCCGGGAGG+AGG	+	tig0020520:126201-126220	None:intergenic	60.0%
	AGCTGCACCTGCTGAACCTG+AGG	-	tig0020520:126382-126401	Msa1382670:CDS	60.0%
	GCAGGATGCTGCCACAGATC+AGG	-	tig0020520:126415-126434	Msa1382670:CDS	60.0%
	GCTGCCACAGATCAGGCTTC+TGG	-	tig0020520:126422-126441	Msa1382670:CDS	60.0%
	ACCGGCGGGAAGACTCTTCC+AGG	-	tig0020520:123154-123173	Msa1382670:three_prime_UTR	65.0%
	GGCGGGAAGACTCTTCCAGG+TGG	-	tig0020520:123157-123176	Msa1382670:three_prime_UTR	65.0%
	TGGACAGGGTGGGTATGGGG+GGG	-	tig0020520:125863-125882	Msa1382670:intron	65.0%
	GCTGCAGCCTCAGGTTCAGC+AGG	+	tig0020520:126392-126411	None:intergenic	65.0%
	ACCTGAGGCTGCAGCTGAGC+AGG	-	tig0020520:126397-126416	Msa1382670:CDS	65.0%
	TCCTGCTCAGCTGCAGCCTC+AGG	+	tig0020520:126401-126420	None:intergenic	65.0%
	ATCGGCGGTGAGACCGGCGA+TGG	+	tig0020520:123333-123352	None:intergenic	70.0%
	ATCGCCGGTCTCACCGCCGA+TGG	-	tig0020520:123332-123351	Msa1382670:CDS	70.0%
	ACGGCCATCGGCGGTGAGAC+CGG	+	tig0020520:123339-123358	None:intergenic	70.0%
!!	GGTGCTGGTGGGGCTGACCA+AGG	-	tig0020520:126458-126477	Msa1382670:CDS	70.0%
	GCTGGTGGGGCTGACCAAGG+TGG	-	tig0020520:126461-126480	Msa1382670:CDS	70.0%

Chromosome	Type	Strat	End	Strand	Name
tig0020520	gene	123000	126824	123000	ID=Msa1382670;Name=Msa1382670
tig0020520	mRNA	123000	126824	123000	ID=Msa1382670-mRNA-1;Parent=Msa1382670;Name=Msa1382670-mRNA-1;_AED=0.02;_eAED=0.02;_QI=113\|1\|1\|1\|1\|1\|2\|322\|281
tig0020520	exon	123000	123816	123000	ID=Msa1382670-mRNA-1:exon:8201;Parent=Msa1382670-mRNA-1
tig0020520	exon	126361	126824	126361	ID=Msa1382670-mRNA-1:exon:8200;Parent=Msa1382670-mRNA-1
tig0020520	five_prime_UTR	126712	126824	126712	ID=Msa1382670-mRNA-1:five_prime_utr;Parent=Msa1382670-mRNA-1
tig0020520	CDS	126361	126711	126361	ID=Msa1382670-mRNA-1:cds;Parent=Msa1382670-mRNA-1
tig0020520	CDS	123322	123816	123322	ID=Msa1382670-mRNA-1:cds;Parent=Msa1382670-mRNA-1
tig0020520	three_prime_UTR	123000	123321	123000	ID=Msa1382670-mRNA-1:three_prime_utr;Parent=Msa1382670-mRNA-1

Gene Sequence

>Msa1382670

ATGTTTAGAAATCAATACGATACCGACGTAACAACATGGTCACCGGCGGGAAGACTCTTCCAGGTGGAATACGCCATGGAAGCAGTTAAGCAAGGTTCAGCAGCAATAGGTCTCCGATCCAAAACTCACGTGGTTCTCGCGTGTGTTAACAAAGCCAATTCTGAACTATCTTCTCATCAGAAGAAGATCTTCAAGGTTGATGATCATATCGGCGTTGCCATCGCCGGTCTCACCGCCGATGGCCGTGTTCTTTCCCGTTACATGAGATCTGAATGCATTAACTATAATTACACTTATGAATCTCCGCTTCCCGTTGGTAGACTCGTCGTTCAGCTCGCCGATAAGGCTCAGGTTTGCACTCAGCGATCATGGAAGCGTCCTTATGGCGTTGGACTTCTAGTAGCTGGATTAGATGAATCAGGGGCTCACCTCTATTACAACTGCCCAAGCGGAAACTATTTTGAATATCAGGCATTTGCAATCGGTTCACGCTCACAAGCTGCAAAGACATATTTGGAACGCAAATTTAACAACTTCACAGCCTCCTCCCGGGAAGATCTGATCAAAGATGCACTCATTGCAACTAGGGAGTCCTTGCAAGGTGAAAAGCTCAGGAGCTCCGTATGCACCATTGCTGTGGTTGGAGTTGGTGAGCCTTTCCACATTTTGGATCAGGAAACTGTTCAACAGTTAATTGATACTTTTGAGATTGTGAGGGAGGAAGAAGCTGCACCTGCTGAACCTGAGGCTGCAGCTGAGCAGGATGCTGCCACAGATCAGGCTTCTGGTGCAGATCAAAGTGGTGCTGGTGGGGCTGACCAAGGTGGTTCTCCAATGGAGATTTGA

Protein sequence

>Msa1382670

MFRNQYDTDVTTWSPAGRLFQVEYAMEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRSECINYNYTYESPLPVGRLVVQLADKAQVCTQRSWKRPYGVGLLVAGLDESGAHLYYNCPSGNYFEYQAFAIGSRSQAAKTYLERKFNNFTASSREDLIKDALIATRESLQGEKLRSSVCTIAVVGVGEPFHILDQETVQQLIDTFEIVREEEAAPAEPEAAAEQDAATDQASGADQSGAGGADQGGSPMEI*