Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802240 | XP_003612634.1 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0.0 | 559 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802240 | sp|Q6NS09|TM45B_XENLA | 29.126 | 206 | 138 | 4 | 1 | 204 | 1 | 200 | 1.37e-15 | 78.2 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802240 | G7K852 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0.0 | 559 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001830 | Msa0802240 | 0.863184 | 2.983504e-64 | -8.615850e-47 |
| Msa0010490 | Msa0802240 | 0.815835 | 7.542169e-52 | -8.615850e-47 |
| Msa0010500 | Msa0802240 | 0.804154 | 2.474872e-49 | -8.615850e-47 |
| Msa0015930 | Msa0802240 | 0.822222 | 2.659153e-53 | -8.615850e-47 |
| Msa0052360 | Msa0802240 | 0.808499 | 3.004968e-50 | -8.615850e-47 |
| Msa0059950 | Msa0802240 | 0.808306 | 3.304856e-50 | -8.615850e-47 |
| Msa0061500 | Msa0802240 | 0.802812 | 4.696664e-49 | -8.615850e-47 |
| Msa0082420 | Msa0802240 | 0.812316 | 4.507332e-51 | -8.615850e-47 |
| Msa0090510 | Msa0802240 | 0.800699 | 1.275167e-48 | -8.615850e-47 |
| Msa0115190 | Msa0802240 | 0.809482 | 1.851125e-50 | -8.615850e-47 |
| Msa0118540 | Msa0802240 | 0.824284 | 8.774551e-54 | -8.615850e-47 |
| Msa0613110 | Msa0802240 | 0.809601 | 1.745865e-50 | -8.615850e-47 |
| Msa0631320 | Msa0802240 | 0.844580 | 6.925464e-59 | -8.615850e-47 |
| Msa0641130 | Msa0802240 | 0.813238 | 2.832197e-51 | -8.615850e-47 |
| Msa0672550 | Msa0802240 | 0.800811 | 1.209737e-48 | -8.615850e-47 |
| Msa0679670 | Msa0802240 | 0.811943 | 5.437475e-51 | -8.615850e-47 |
| Msa0703810 | Msa0802240 | 0.803731 | 3.030411e-49 | -8.615850e-47 |
| Msa0711150 | Msa0802240 | 0.809601 | 1.745365e-50 | -8.615850e-47 |
| Msa0744640 | Msa0802240 | 0.806069 | 9.839909e-50 | -8.615850e-47 |
| Msa0760700 | Msa0802240 | 0.912725 | 1.401888e-83 | -8.615850e-47 |
| Msa0769720 | Msa0802240 | 0.806806 | 6.878158e-50 | -8.615850e-47 |
| Msa0795730 | Msa0802240 | 0.817595 | 3.038980e-52 | -8.615850e-47 |
| Msa0796580 | Msa0802240 | -0.802277 | 6.055532e-49 | -8.615850e-47 |
| Msa0802240 | Msa0822500 | 0.806191 | 9.271612e-50 | -8.615850e-47 |
| Msa0802240 | Msa0823370 | 0.809062 | 2.278413e-50 | -8.615850e-47 |
| Msa0802240 | Msa0841730 | 0.805841 | 1.098545e-49 | -8.615850e-47 |
| Msa0802240 | Msa0880810 | 0.802251 | 6.128988e-49 | -8.615850e-47 |
| Msa0802240 | Msa0930740 | 0.833436 | 5.337885e-56 | -8.615850e-47 |
| Msa0802240 | Msa1023310 | 0.846781 | 1.750115e-59 | -8.615850e-47 |
| Msa0802240 | Msa1044510 | 0.804284 | 2.325980e-49 | -8.615850e-47 |
| Msa0802240 | Msa1059470 | 0.806315 | 8.732834e-50 | -8.615850e-47 |
| Msa0802240 | Msa1062040 | 0.866572 | 2.584760e-65 | -8.615850e-47 |
| Msa0802240 | Msa1083970 | 0.802380 | 5.766140e-49 | -8.615850e-47 |
| Msa0802240 | Msa1096950 | 0.811635 | 6.342180e-51 | -8.615850e-47 |
| Msa0802240 | Msa1107200 | 0.865858 | 4.351208e-65 | -8.615850e-47 |
| Msa0802240 | Msa1133230 | 0.825945 | 3.553850e-54 | -8.615850e-47 |
| Msa0802240 | Msa1150780 | 0.868072 | 8.569510e-66 | -8.615850e-47 |
| Msa0802240 | Msa1175200 | 0.800116 | 1.676250e-48 | -8.615850e-47 |
| Msa0802240 | Msa1176170 | 0.820353 | 7.174220e-53 | -8.615850e-47 |
| Msa0802240 | Msa1180500 | 0.842083 | 3.211391e-58 | -8.615850e-47 |
| Msa0802240 | Msa1180720 | 0.815804 | 7.663633e-52 | -8.615850e-47 |
| Msa0802240 | Msa1191440 | 0.805864 | 1.086526e-49 | -8.615850e-47 |
| Msa0802240 | Msa1206270 | 0.801359 | 9.346967e-49 | -8.615850e-47 |
| Msa0802240 | Msa1218580 | 0.800198 | 1.612439e-48 | -8.615850e-47 |
| Msa0802240 | Msa1231710 | 0.841721 | 4.001185e-58 | -8.615850e-47 |
| Msa0802240 | Msa1231840 | 0.858406 | 8.423468e-63 | -8.615850e-47 |
| Msa0802240 | Msa1270050 | 0.810343 | 1.208164e-50 | -8.615850e-47 |
| Msa0802240 | Msa1274380 | 0.800109 | 1.681199e-48 | -8.615850e-47 |
| Msa0802240 | Msa1277410 | 0.833051 | 6.658430e-56 | -8.615850e-47 |
| Msa0802240 | Msa1277780 | 0.825097 | 5.643905e-54 | -8.615850e-47 |
| Msa0802240 | Msa1280170 | 0.801173 | 1.020310e-48 | -8.615850e-47 |
| Msa0802240 | Msa1307160 | 0.837324 | 5.557949e-57 | -8.615850e-47 |
| Msa0802240 | Msa1307180 | 0.831241 | 1.866166e-55 | -8.615850e-47 |
| Msa0802240 | Msa1312440 | 0.825874 | 3.693592e-54 | -8.615850e-47 |
| Msa0802240 | Msa1312520 | 0.841773 | 3.877583e-58 | -8.615850e-47 |
| Msa0802240 | Msa1316360 | 0.846609 | 1.950300e-59 | -8.615850e-47 |
| Msa0802240 | Msa1316460 | 0.811983 | 5.327470e-51 | -8.615850e-47 |
| Msa0802240 | Msa1355890 | 0.846823 | 1.704653e-59 | -8.615850e-47 |
| Msa0802240 | Msa1380220 | 0.804387 | 2.214156e-49 | -8.615850e-47 |
| Msa0802240 | Msa1407760 | 0.834039 | 3.773381e-56 | -8.615850e-47 |
| Msa0802240 | Msa1437730 | 0.821013 | 5.058703e-53 | -8.615850e-47 |
| Msa0121840 | Msa0802240 | 0.801440 | 8.995375e-49 | -8.615850e-47 |
| Msa0152560 | Msa0802240 | 0.803836 | 2.881848e-49 | -8.615850e-47 |
| Msa0156370 | Msa0802240 | 0.817541 | 3.125783e-52 | -8.615850e-47 |
| Msa0233370 | Msa0802240 | 0.801567 | 8.474001e-49 | -8.615850e-47 |
| Msa0234410 | Msa0802240 | -0.800675 | 1.289734e-48 | -8.615850e-47 |
| Msa0365950 | Msa0802240 | 0.805059 | 1.602470e-49 | -8.615850e-47 |
| Msa0380100 | Msa0802240 | 0.808948 | 2.409343e-50 | -8.615850e-47 |
| Msa0388730 | Msa0802240 | 0.812695 | 3.724389e-51 | -8.615850e-47 |
| Msa0389210 | Msa0802240 | 0.820247 | 7.586241e-53 | -8.615850e-47 |
| Msa0445330 | Msa0802240 | 0.830413 | 2.977772e-55 | -8.615850e-47 |
| Msa0265270 | Msa0802240 | 0.800817 | 1.206161e-48 | -8.615850e-47 |
| Msa0331020 | Msa0802240 | 0.804499 | 2.098220e-49 | -8.615850e-47 |
| Msa0534870 | Msa0802240 | 0.839491 | 1.535138e-57 | -8.615850e-47 |
| Msa0545050 | Msa0802240 | 0.817483 | 3.222241e-52 | -8.615850e-47 |
| Msa0592330 | Msa0802240 | 0.825114 | 5.591535e-54 | -8.615850e-47 |
| Msa0600590 | Msa0802240 | 0.837254 | 5.793525e-57 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802240 | MtrunA17_Chr5g0409571 | 97.482 | 278 | 7 | 0 | 1 | 278 | 1 | 278 | 0.0 | 559 |
| Msa0802240 | MtrunA17_Chr8g0369411 | 72.348 | 264 | 73 | 0 | 1 | 264 | 1 | 264 | 2.11e-146 | 411 |
| Msa0802240 | MtrunA17_Chr8g0369401 | 64.458 | 166 | 59 | 0 | 99 | 264 | 1 | 166 | 2.33e-73 | 222 |
| Msa0802240 | MtrunA17_Chr4g0033971 | 31.008 | 258 | 159 | 5 | 1 | 247 | 1 | 250 | 2.42e-32 | 120 |
| Msa0802240 | MtrunA17_Chr2g0287431 | 26.740 | 273 | 188 | 5 | 1 | 266 | 1 | 268 | 1.17e-31 | 119 |
| Msa0802240 | MtrunA17_Chr1g0210731 | 28.028 | 289 | 187 | 9 | 5 | 276 | 2 | 286 | 6.61e-30 | 114 |
| Msa0802240 | MtrunA17_Chr1g0210721 | 26.460 | 291 | 192 | 7 | 1 | 278 | 1 | 282 | 1.37e-22 | 94.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0802240 | AT1G32127.2 | 74.242 | 264 | 68 | 0 | 1 | 264 | 1 | 264 | 1.87e-146 | 411 |
| Msa0802240 | AT1G32127.1 | 74.242 | 264 | 68 | 0 | 1 | 264 | 1 | 264 | 1.87e-146 | 411 |
| Msa0802240 | AT1G55240.1 | 32.302 | 291 | 180 | 7 | 1 | 278 | 1 | 287 | 2.14e-45 | 155 |
| Msa0802240 | AT1G55230.1 | 28.322 | 286 | 192 | 6 | 1 | 277 | 1 | 282 | 6.60e-40 | 140 |
| Msa0802240 | AT5G19870.1 | 29.643 | 280 | 181 | 9 | 1 | 270 | 1 | 274 | 2.85e-34 | 125 |
| Msa0802240 | AT1G49470.1 | 32.210 | 267 | 155 | 7 | 1 | 251 | 1 | 257 | 5.69e-32 | 120 |
Find 73 sgRNAs with CRISPR-Local
Find 194 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAGTAGGGTATGCTATTT+TGG | 0.185525 | 5_3:-16423163 | Msa0802240:three_prime_UTR |
| TAGTTGGGGTGTGGCATATT+TGG | 0.191911 | 5_3:-16425589 | Msa0802240:CDS |
| CTTCTTATGTTCTTTATCTA+TGG | 0.197883 | 5_3:-16425341 | Msa0802240:CDS |
| TAATGATTTGCATACAATTC+AGG | 0.249628 | 5_3:-16423203 | Msa0802240:CDS |
| ATAAAATGCATAGTCCTATT+TGG | 0.267816 | 5_3:+16423518 | None:intergenic |
| TTCATATAGAAGATATCTTT+TGG | 0.275459 | 5_3:-16425747 | Msa0802240:five_prime_UTR |
| TATAGAACATGTCTGTATAT+TGG | 0.287889 | 5_3:-16423080 | Msa0802240:three_prime_UTR |
| ACCAGATGGTTGCAAGATTA+AGG | 0.289473 | 5_3:-16423374 | Msa0802240:CDS |
| GCTCGAACACGAAACGTCTT+AGG | 0.306136 | 5_3:+16425539 | None:intergenic |
| AGTTGGGGTGTGGCATATTT+GGG | 0.310805 | 5_3:-16425588 | Msa0802240:CDS |
| TTGCAACCATCTGGTATCAT+AGG | 0.312702 | 5_3:+16423382 | None:intergenic |
| TTTCAAGGGTCATGCTTTGC+CGG | 0.328389 | 5_3:-16425627 | Msa0802240:CDS |
| ACCCTCCTCGTCTTCCAAAT+AGG | 0.366655 | 5_3:-16423532 | Msa0802240:CDS |
| GTCTGTATATTGGAGTTAAA+AGG | 0.367686 | 5_3:-16423070 | Msa0802240:three_prime_UTR |
| AAATCGGCTGGAAAGTTGTT+TGG | 0.368226 | 5_3:+16423472 | None:intergenic |
| GCTCTTTGTTGCCATCCTTT+CGG | 0.373014 | 5_3:-16423287 | Msa0802240:CDS |
| GAGCTCTATGTTGTTGCAAT+TGG | 0.374652 | 5_3:-16425473 | Msa0802240:CDS |
| CTTTAGCGCTGCAAGGCATA+TGG | 0.378119 | 5_3:-16423435 | Msa0802240:CDS |
| TGATGGGAGGCTAAAGTACT+TGG | 0.381774 | 5_3:-16425495 | Msa0802240:CDS |
| TCCTTAATCTTGCAACCATC+TGG | 0.387259 | 5_3:+16423373 | None:intergenic |
| AGCGATGCCGTTGCATAAAT+CGG | 0.390715 | 5_3:+16423456 | None:intergenic |
| GCAAGTGGTGTAGAAGGAAT+AGG | 0.399248 | 5_3:-16423006 | Msa0802240:three_prime_UTR |
| GCCATCCTTTCGGTTCTTGT+TGG | 0.409177 | 5_3:-16423277 | Msa0802240:CDS |
| TTTCATTCAACATCACATAA+AGG | 0.423117 | 5_3:-16423574 | Msa0802240:CDS |
| TTCAAGGGTCATGCTTTGCC+GGG | 0.438314 | 5_3:-16425626 | Msa0802240:CDS |
| TTACTTACAATAGTAGTGAT+TGG | 0.439089 | 5_3:+16426471 | None:intergenic |
| CTGGAAAGTTGTTTGGAAGA+AGG | 0.447000 | 5_3:+16423479 | None:intergenic |
| GATTAGATCAAAACTGAAGT+AGG | 0.452967 | 5_3:-16423177 | Msa0802240:exon |
| TACAGCTAAGAAATCATTCA+AGG | 0.464409 | 5_3:-16425705 | Msa0802240:five_prime_UTR |
| ACTCACCTCAAGATAATTGT+TGG | 0.467738 | 5_3:-16425413 | Msa0802240:CDS |
| TGGAAAGTTGTTTGGAAGAA+GGG | 0.490039 | 5_3:+16423480 | None:intergenic |
| CGGAAAATGCCATGGCAGCT+AGG | 0.498795 | 5_3:+16423617 | None:intergenic |
| TTGATTTAAGTACAAGAGAG+TGG | 0.499806 | 5_3:-16425676 | Msa0802240:five_prime_UTR |
| ATGAATGACTTTGAGCACTC+GGG | 0.516066 | 5_3:-16425368 | Msa0802240:CDS |
| ATGCCGTTGCATAAATCGGC+TGG | 0.516097 | 5_3:+16423460 | None:intergenic |
| AGGAAACTTATTCTTTAATG+TGG | 0.516649 | 5_3:-16422986 | Msa0802240:three_prime_UTR |
| CTCCCATCAAAACCCGGTAC+AGG | 0.520728 | 5_3:+16425509 | None:intergenic |
| TTAGTTACACTTGAGTATGT+TGG | 0.525182 | 5_3:-16423115 | Msa0802240:three_prime_UTR |
| CATAAAATACCTTGTTGCAA+TGG | 0.527231 | 5_3:+16423643 | None:intergenic |
| TTTATGTTTCCTAGCTGCCA+TGG | 0.533188 | 5_3:-16423626 | Msa0802240:CDS |
| AGACGTTTCGTGTTCGAGCG+TGG | 0.536426 | 5_3:-16425535 | Msa0802240:CDS |
| TCGAGCGTGGAATCCTGTAC+CGG | 0.548667 | 5_3:-16425522 | Msa0802240:CDS |
| GTTGTTTGGAAGAAGGGCTC+CGG | 0.548724 | 5_3:+16423486 | None:intergenic |
| TATGAATGACTTTGAGCACT+CGG | 0.553153 | 5_3:-16425369 | Msa0802240:CDS |
| TTTGGAAGACGAGGAGGGTG+TGG | 0.553435 | 5_3:+16423536 | None:intergenic |
| TGCAACCATCTGGTATCATA+GGG | 0.554097 | 5_3:+16423383 | None:intergenic |
| TCAGTTGACAGTGAGATTCG+CGG | 0.561893 | 5_3:-16423331 | Msa0802240:CDS |
| TTTCCAGCCGATTTATGCAA+CGG | 0.568372 | 5_3:-16423463 | Msa0802240:CDS |
| GATTTGCATACAATTCAGGA+TGG | 0.570638 | 5_3:-16423199 | Msa0802240:CDS |
| CGAGCGTGGAATCCTGTACC+GGG | 0.573272 | 5_3:-16425521 | Msa0802240:CDS |
| TTTATGTGATGTTGAATGAA+AGG | 0.575760 | 5_3:+16423576 | None:intergenic |
| ATTAGATCAAAACTGAAGTA+GGG | 0.575919 | 5_3:-16423176 | Msa0802240:exon |
| TCAAAGTCATTCATATGAGA+AGG | 0.583114 | 5_3:+16425377 | None:intergenic |
| ACCAACAAGAACCGAAAGGA+TGG | 0.586194 | 5_3:+16423276 | None:intergenic |
| CACCTCAAGATAATTGTTGG+TGG | 0.591598 | 5_3:-16425410 | Msa0802240:CDS |
| TATGGCCCTATGATACCAGA+TGG | 0.593823 | 5_3:-16423388 | Msa0802240:CDS |
| AACATCACATAAAGGTCTCG+AGG | 0.601372 | 5_3:-16423566 | Msa0802240:CDS |
| GGCATCGCTTTAGCGCTGCA+AGG | 0.601674 | 5_3:-16423442 | Msa0802240:CDS |
| AAAGGAGAATAGAAGATACT+CGG | 0.605972 | 5_3:+16423594 | None:intergenic |
| ATATCAATGAATGATTGTGA+AGG | 0.613836 | 5_3:+16426533 | None:intergenic |
| TCAAGGGTCATGCTTTGCCG+GGG | 0.619566 | 5_3:-16425625 | Msa0802240:CDS |
| GTCCTATTTGGAAGACGAGG+AGG | 0.619764 | 5_3:+16423530 | None:intergenic |
| CACCACCAACAATTATCTTG+AGG | 0.625766 | 5_3:+16425408 | None:intergenic |
| TCCTATTTGGAAGACGAGGA+GGG | 0.627926 | 5_3:+16423531 | None:intergenic |
| AGATTTCTTCCATTGCAACA+AGG | 0.635937 | 5_3:-16423652 | Msa0802240:CDS |
| ACAGCTAAGAAATCATTCAA+GGG | 0.636237 | 5_3:-16425704 | Msa0802240:five_prime_UTR |
| ACATCACATAAAGGTCTCGA+GGG | 0.649189 | 5_3:-16423565 | Msa0802240:CDS |
| TGAATGACTTTGAGCACTCG+GGG | 0.653649 | 5_3:-16425367 | Msa0802240:CDS |
| TTTAGCCTCCCATCAAAACC+CGG | 0.654952 | 5_3:+16425503 | None:intergenic |
| ATACTCGGCGGAAAATGCCA+TGG | 0.666532 | 5_3:+16423609 | None:intergenic |
| CAGTACCAACAAGAACCGAA+AGG | 0.694080 | 5_3:+16423272 | None:intergenic |
| ATAGTCCTATTTGGAAGACG+AGG | 0.716043 | 5_3:+16423527 | None:intergenic |
| GGAGAATAGAAGATACTCGG+CGG | 0.725727 | 5_3:+16423597 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAAAGTTAAGATTTTTATA+AGG | + | chr5_3:16423249-16423268 | None:intergenic | 10.0% |
| !! | GTAAATATTATTAAGAAAAA+TGG | - | chr5_3:16423934-16423953 | Msa0802240:intron | 10.0% |
| !!! | AACTTTTAGATATGAATAAT+GGG | + | chr5_3:16423205-16423224 | None:intergenic | 15.0% |
| !! | TTTGATGTTTGAAAATTAAT+TGG | - | chr5_3:16423812-16423831 | Msa0802240:intron | 15.0% |
| !! | CTAATTTATTCTATTTAAAC+AGG | + | chr5_3:16424374-16424393 | None:intergenic | 15.0% |
| !! | CTGTTTAAATAGAATAAATT+AGG | - | chr5_3:16424372-16424391 | Msa0802240:intron | 15.0% |
| !! | TTGTCTTATGATTATAAAAA+GGG | + | chr5_3:16424865-16424884 | None:intergenic | 15.0% |
| !! | TTTGTCTTATGATTATAAAA+AGG | + | chr5_3:16424866-16424885 | None:intergenic | 15.0% |
| !!! | TTTTCTCTTATTTGGTTTAA+TGG | + | chr5_3:16422997-16423016 | None:intergenic | 20.0% |
| !!! | GGTTTTTTTTTTTTGTTTGT+GGG | + | chr5_3:16423037-16423056 | None:intergenic | 20.0% |
| !!! | AGGTTTTTTTTTTTTGTTTG+TGG | + | chr5_3:16423038-16423057 | None:intergenic | 20.0% |
| !! | TGAAAATGAAAATGAAAAGA+GGG | + | chr5_3:16423143-16423162 | None:intergenic | 20.0% |
| !! | ATGAAAATGAAAATGAAAAG+AGG | + | chr5_3:16423144-16423163 | None:intergenic | 20.0% |
| !!! | GAACTTTTAGATATGAATAA+TGG | + | chr5_3:16423206-16423225 | None:intergenic | 20.0% |
| !!! | AAAATTTTCATACTTCTCAA+TGG | - | chr5_3:16423360-16423379 | Msa0802240:CDS | 20.0% |
| !!! | TTTTTATATTTCTTCTCCTT+TGG | - | chr5_3:16423485-16423504 | Msa0802240:CDS | 20.0% |
| !! | AAGTGATTAATTAGTTGATT+AGG | - | chr5_3:16423553-16423572 | Msa0802240:CDS | 20.0% |
| !! | ATTGCTTAATTAACAAATCT+TGG | - | chr5_3:16423576-16423595 | Msa0802240:CDS | 20.0% |
| !!! | TTGTTTCTTGAAAAAATTCA+AGG | - | chr5_3:16423605-16423624 | Msa0802240:CDS | 20.0% |
| !! | TAGAAATATTCTGTCAAAAA+AGG | - | chr5_3:16423783-16423802 | Msa0802240:intron | 20.0% |
| !! | GTTTGAAAATTAATTGGTAT+AGG | - | chr5_3:16423818-16423837 | Msa0802240:intron | 20.0% |
| !!! | TTCATATAGAAGATATCTTT+TGG | - | chr5_3:16423841-16423860 | Msa0802240:intron | 20.0% |
| !!! | TAAAAAAACATTTTTTGCAG+CGG | + | chr5_3:16425325-16425344 | None:intergenic | 20.0% |
| !! | ATATTGTAATAATACAGTAG+AGG | + | chr5_3:16425435-16425454 | None:intergenic | 20.0% |
| !!! | TTCTTTAAAAGTTAATGCAA+GGG | + | chr5_3:16425831-16425850 | None:intergenic | 20.0% |
| !! | AAATCTATGCAAGAAAAAAA+CGG | + | chr5_3:16425922-16425941 | None:intergenic | 20.0% |
| !! | CTGAAAGTTTTTCTCTTATT+TGG | + | chr5_3:16423005-16423024 | None:intergenic | 25.0% |
| ! | CAAATAAGAGAAAAACTTTC+AGG | - | chr5_3:16423003-16423022 | Msa0802240:three_prime_UTR | 25.0% |
| ! | ATATCAATGAATGATTGTGA+AGG | + | chr5_3:16423058-16423077 | None:intergenic | 25.0% |
| ! | TTACTTACAATAGTAGTGAT+TGG | + | chr5_3:16423120-16423139 | None:intergenic | 25.0% |
| ! | ATTCACTTATTACTACTAGA+TGG | - | chr5_3:16423310-16423329 | Msa0802240:CDS | 25.0% |
| ! | ACAAAAAAATCAATGTGAAG+AGG | + | chr5_3:16423408-16423427 | None:intergenic | 25.0% |
| ! | TGAAGAAAAAGTCAAAACTT+GGG | + | chr5_3:16423441-16423460 | None:intergenic | 25.0% |
| ! | ATGAAGAAAAAGTCAAAACT+TGG | + | chr5_3:16423442-16423461 | None:intergenic | 25.0% |
| ! | AAATTCAAGGACACTATTAT+TGG | - | chr5_3:16423618-16423637 | Msa0802240:CDS | 25.0% |
| ! | ACTTTCTGATAAAACTCAAA+TGG | + | chr5_3:16423672-16423691 | None:intergenic | 25.0% |
| !! | TCCTTGAAATTTGAAGTTTA+TGG | - | chr5_3:16423754-16423773 | Msa0802240:intron | 25.0% |
| ! | ACCATAAACTTCAAATTTCA+AGG | + | chr5_3:16423758-16423777 | None:intergenic | 25.0% |
| ! | CTTCTTATGTTCTTTATCTA+TGG | - | chr5_3:16424247-16424266 | Msa0802240:intron | 25.0% |
| ! | TCTATGATTAATCATGAGAA+AGG | + | chr5_3:16424434-16424453 | None:intergenic | 25.0% |
| ! | TCTCATGATTAATCATAGAT+AGG | - | chr5_3:16424435-16424454 | Msa0802240:intron | 25.0% |
| !!! | AATAATGACTTGTTCTAGAT+AGG | - | chr5_3:16424613-16424632 | Msa0802240:intron | 25.0% |
| !!! | ATAATGACTTGTTCTAGATA+GGG | - | chr5_3:16424614-16424633 | Msa0802240:intron | 25.0% |
| !!! | TAGATCCTTTTTTTTCTTTC+CGG | - | chr5_3:16424704-16424723 | Msa0802240:intron | 25.0% |
| !! | TAATGTATTGATGTTCTAGA+TGG | + | chr5_3:16424821-16424840 | None:intergenic | 25.0% |
| ! | AAAAGGGAGTGAAAAAAATT+AGG | + | chr5_3:16424849-16424868 | None:intergenic | 25.0% |
| !! | TAGTTACTTTCAAGTGAAAT+TGG | - | chr5_3:16425060-16425079 | Msa0802240:intron | 25.0% |
| !! | GAAACTCTTTCATTTAGTTT+AGG | - | chr5_3:16425518-16425537 | Msa0802240:CDS | 25.0% |
| ! | GAGAAATAAACTGAATAAGA+AGG | - | chr5_3:16425578-16425597 | Msa0802240:CDS | 25.0% |
| !! | GTTCTTTAAAAGTTAATGCA+AGG | + | chr5_3:16425832-16425851 | None:intergenic | 25.0% |
| ! | TTTATGTGATGTTGAATGAA+AGG | + | chr5_3:16426015-16426034 | None:intergenic | 25.0% |
| ! | TTTCATTCAACATCACATAA+AGG | - | chr5_3:16426014-16426033 | Msa0802240:intron | 25.0% |
| ! | ATAAAATGCATAGTCCTATT+TGG | + | chr5_3:16426073-16426092 | None:intergenic | 25.0% |
| !! | TAATGATTTGCATACAATTC+AGG | - | chr5_3:16426385-16426404 | Msa0802240:intron | 25.0% |
| ! | ATTAGATCAAAACTGAAGTA+GGG | - | chr5_3:16426412-16426431 | Msa0802240:intron | 25.0% |
| ! | TATAGAACATGTCTGTATAT+TGG | - | chr5_3:16426508-16426527 | Msa0802240:five_prime_UTR | 25.0% |
| ! | AGGAAACTTATTCTTTAATG+TGG | - | chr5_3:16426602-16426621 | Msa0802240:five_prime_UTR | 25.0% |
| !! | ACTAGATGGATTAAACTTGT+TGG | - | chr5_3:16423324-16423343 | Msa0802240:CDS | 30.0% |
| !! | CTAGATGGATTAAACTTGTT+GGG | - | chr5_3:16423325-16423344 | Msa0802240:CDS | 30.0% |
| AGAGGAAAATTATAGAAGCA+TGG | + | chr5_3:16423390-16423409 | None:intergenic | 30.0% | |
| GAAGAAAAAGTCAAAACTTG+GGG | + | chr5_3:16423440-16423459 | None:intergenic | 30.0% | |
| !!! | CCACTTTTTTCATTTTCCAA+AGG | + | chr5_3:16423504-16423523 | None:intergenic | 30.0% |
| ! | CCTTTGGAAAATGAAAAAAG+TGG | - | chr5_3:16423501-16423520 | Msa0802240:CDS | 30.0% |
| TACAGCTAAGAAATCATTCA+AGG | - | chr5_3:16423883-16423902 | Msa0802240:intron | 30.0% | |
| ACAGCTAAGAAATCATTCAA+GGG | - | chr5_3:16423884-16423903 | Msa0802240:intron | 30.0% | |
| TTGATTTAAGTACAAGAGAG+TGG | - | chr5_3:16423912-16423931 | Msa0802240:intron | 30.0% | |
| AAGAAAAATGGGATCTTTCA+AGG | - | chr5_3:16423946-16423965 | Msa0802240:intron | 30.0% | |
| AGAAAAATGGGATCTTTCAA+GGG | - | chr5_3:16423947-16423966 | Msa0802240:intron | 30.0% | |
| TCAAAGTCATTCATATGAGA+AGG | + | chr5_3:16424214-16424233 | None:intergenic | 30.0% | |
| AACACATCTTACTTGAGTAT+TGG | + | chr5_3:16424465-16424484 | None:intergenic | 30.0% | |
| !! | TTGCATAGTTCTGAATTTCA+GGG | - | chr5_3:16424675-16424694 | Msa0802240:intron | 30.0% |
| AGTTTCCGGAAAGAAAAAAA+AGG | + | chr5_3:16424712-16424731 | None:intergenic | 30.0% | |
| ! | GTACTAGCAAAATAACTTGT+AGG | + | chr5_3:16424903-16424922 | None:intergenic | 30.0% |
| ! | GTTTAATTTCCACAGTACAT+CGG | + | chr5_3:16424957-16424976 | None:intergenic | 30.0% |
| !! | AGTTTTGCTACATGATTTGT+GGG | + | chr5_3:16425198-16425217 | None:intergenic | 30.0% |
| TCAAGAACTAACATATCTAG+TGG | + | chr5_3:16425400-16425419 | None:intergenic | 30.0% | |
| ATAATACAGTAGAGGATACA+AGG | + | chr5_3:16425427-16425446 | None:intergenic | 30.0% | |
| TGTAAATGGTGTATTCTTTG+CGG | - | chr5_3:16425489-16425508 | Msa0802240:CDS | 30.0% | |
| ATAAACTGAATAAGAAGGCA+AGG | - | chr5_3:16425583-16425602 | Msa0802240:CDS | 30.0% | |
| CTTCAAATTTATGCATTGCA+AGG | - | chr5_3:16425708-16425727 | Msa0802240:five_prime_UTR | 30.0% | |
| CATAAAATACCTTGTTGCAA+TGG | + | chr5_3:16425948-16425967 | None:intergenic | 30.0% | |
| AAAGGAGAATAGAAGATACT+CGG | + | chr5_3:16425997-16426016 | None:intergenic | 30.0% | |
| ! | TGCATTTTATCTTCAATTGC+CGG | - | chr5_3:16426083-16426102 | Msa0802240:intron | 30.0% |
| !! | CAAACTGCTTTTGTTCTTTA+TGG | - | chr5_3:16426182-16426201 | Msa0802240:intron | 30.0% |
| GATTAGATCAAAACTGAAGT+AGG | - | chr5_3:16426411-16426430 | Msa0802240:intron | 30.0% | |
| TTAGTTACACTTGAGTATGT+TGG | - | chr5_3:16426473-16426492 | Msa0802240:intron | 30.0% | |
| GTCTGTATATTGGAGTTAAA+AGG | - | chr5_3:16426518-16426537 | Msa0802240:five_prime_UTR | 30.0% | |
| TTGAGAAAGATTGTGTGTGA+AGG | + | chr5_3:16423274-16423293 | None:intergenic | 35.0% | |
| ! | AAAAGTGGTTGACTGACTTT+AGG | - | chr5_3:16423516-16423535 | Msa0802240:CDS | 35.0% |
| !!! | GGACGTTGTTTTTTGTAGTT+GGG | - | chr5_3:16423984-16424003 | Msa0802240:intron | 35.0% |
| !!! | GACGTTGTTTTTTGTAGTTG+GGG | - | chr5_3:16423985-16424004 | Msa0802240:intron | 35.0% |
| ACTCACCTCAAGATAATTGT+TGG | - | chr5_3:16424175-16424194 | Msa0802240:intron | 35.0% | |
| TATGAATGACTTTGAGCACT+CGG | - | chr5_3:16424219-16424238 | Msa0802240:intron | 35.0% | |
| ! | CAAGTAAGATGTGTTCTAGA+CGG | - | chr5_3:16424470-16424489 | Msa0802240:intron | 35.0% |
| !! | GTTGCATAGTTCTGAATTTC+AGG | - | chr5_3:16424674-16424693 | Msa0802240:intron | 35.0% |
| CAATTCAGTTGCATAGTTTC+CGG | + | chr5_3:16424726-16424745 | None:intergenic | 35.0% | |
| AACTATGCAACTGAATTGTG+TGG | - | chr5_3:16424728-16424747 | Msa0802240:intron | 35.0% | |
| ! | TGTATTGATGTTCTAGATGG+AGG | + | chr5_3:16424818-16424837 | None:intergenic | 35.0% |
| ATGTTAAAACGAAGCTTCAG+TGG | - | chr5_3:16424998-16425017 | Msa0802240:intron | 35.0% | |
| ! | GAGTTTTGCTACATGATTTG+TGG | + | chr5_3:16425199-16425218 | None:intergenic | 35.0% |
| !! | GGCTCTAAAAGTTAACATTG+TGG | - | chr5_3:16425245-16425264 | Msa0802240:intron | 35.0% |
| ! | GCTTTTTGTGTGACTGTAAA+TGG | - | chr5_3:16425475-16425494 | Msa0802240:CDS | 35.0% |
| CTTCAAATTTATGCATTGCG+AGG | - | chr5_3:16425748-16425767 | Msa0802240:five_prime_UTR | 35.0% | |
| GTGTGTTTAGTTAAAGATGC+AGG | + | chr5_3:16425795-16425814 | None:intergenic | 35.0% | |
| TATGCAAGAAAAAAACGGAG+AGG | + | chr5_3:16425917-16425936 | None:intergenic | 35.0% | |
| AGATTTCTTCCATTGCAACA+AGG | - | chr5_3:16425936-16425955 | Msa0802240:intron | 35.0% | |
| TGGAAAGTTGTTTGGAAGAA+GGG | + | chr5_3:16426111-16426130 | None:intergenic | 35.0% | |
| GATTTGCATACAATTCAGGA+TGG | - | chr5_3:16426389-16426408 | Msa0802240:intron | 35.0% | |
| !! | TGAAGTAGGGTATGCTATTT+TGG | - | chr5_3:16426425-16426444 | Msa0802240:intron | 35.0% |
| ACTACAAAAAACAACGTCCC+CGG | + | chr5_3:16423983-16424002 | None:intergenic | 40.0% | |
| !!! | GGGACGTTGTTTTTTGTAGT+TGG | - | chr5_3:16423983-16424002 | Msa0802240:intron | 40.0% |
| !!! | TGTTTTTTGTAGTTGGGGTG+TGG | - | chr5_3:16423990-16424009 | Msa0802240:intron | 40.0% |
| GAGCTCTATGTTGTTGCAAT+TGG | - | chr5_3:16424115-16424134 | Msa0802240:intron | 40.0% | |
| CACCTCAAGATAATTGTTGG+TGG | - | chr5_3:16424178-16424197 | Msa0802240:intron | 40.0% | |
| CACCACCAACAATTATCTTG+AGG | + | chr5_3:16424183-16424202 | None:intergenic | 40.0% | |
| ATGAATGACTTTGAGCACTC+GGG | - | chr5_3:16424220-16424239 | Msa0802240:intron | 40.0% | |
| CTCTACTTAGCGAAAAAACC+AGG | - | chr5_3:16424278-16424297 | Msa0802240:intron | 40.0% | |
| GAGCAATAGATGAACTAACC+TGG | + | chr5_3:16424299-16424318 | None:intergenic | 40.0% | |
| !! | TTCTAGACGGTGTTGTCAAT+TGG | - | chr5_3:16424483-16424502 | Msa0802240:intron | 40.0% |
| !! | TCTAGACGGTGTTGTCAATT+GGG | - | chr5_3:16424484-16424503 | Msa0802240:intron | 40.0% |
| !! | TACAGAGTGTTGCCAAATAG+TGG | + | chr5_3:16424572-16424591 | None:intergenic | 40.0% |
| CTCCAATAAGTCCATGTTGT+AGG | - | chr5_3:16425216-16425235 | Msa0802240:intron | 40.0% | |
| TGCCTACAACATGGACTTAT+TGG | + | chr5_3:16425221-16425240 | None:intergenic | 40.0% | |
| GAAAAAAACGGAGAGGAGTA+TGG | + | chr5_3:16425910-16425929 | None:intergenic | 40.0% | |
| TTTATGTTTCCTAGCTGCCA+TGG | - | chr5_3:16425962-16425981 | Msa0802240:intron | 40.0% | |
| AACATCACATAAAGGTCTCG+AGG | - | chr5_3:16426022-16426041 | Msa0802240:intron | 40.0% | |
| ACATCACATAAAGGTCTCGA+GGG | - | chr5_3:16426023-16426042 | Msa0802240:intron | 40.0% | |
| ATAGTCCTATTTGGAAGACG+AGG | + | chr5_3:16426064-16426083 | None:intergenic | 40.0% | |
| CTGGAAAGTTGTTTGGAAGA+AGG | + | chr5_3:16426112-16426131 | None:intergenic | 40.0% | |
| AAATCGGCTGGAAAGTTGTT+TGG | + | chr5_3:16426119-16426138 | None:intergenic | 40.0% | |
| ! | TTTCCAGCCGATTTATGCAA+CGG | - | chr5_3:16426125-16426144 | Msa0802240:intron | 40.0% |
| TGCAACCATCTGGTATCATA+GGG | + | chr5_3:16426208-16426227 | None:intergenic | 40.0% | |
| TTGCAACCATCTGGTATCAT+AGG | + | chr5_3:16426209-16426228 | None:intergenic | 40.0% | |
| ACCAGATGGTTGCAAGATTA+AGG | - | chr5_3:16426214-16426233 | Msa0802240:intron | 40.0% | |
| TCCTTAATCTTGCAACCATC+TGG | + | chr5_3:16426218-16426237 | None:intergenic | 40.0% | |
| ! | CTTTTAGCAAGTGGTGTAGA+AGG | - | chr5_3:16426576-16426595 | Msa0802240:five_prime_UTR | 40.0% |
| TTTCAAGGGTCATGCTTTGC+CGG | - | chr5_3:16423961-16423980 | Msa0802240:intron | 45.0% | |
| TAGTTGGGGTGTGGCATATT+TGG | - | chr5_3:16423999-16424018 | Msa0802240:intron | 45.0% | |
| AGTTGGGGTGTGGCATATTT+GGG | - | chr5_3:16424000-16424019 | Msa0802240:intron | 45.0% | |
| !! | AATCCTGTACCGGGTTTTGA+TGG | - | chr5_3:16424076-16424095 | Msa0802240:intron | 45.0% |
| !! | ATCCTGTACCGGGTTTTGAT+GGG | - | chr5_3:16424077-16424096 | Msa0802240:intron | 45.0% |
| TTTAGCCTCCCATCAAAACC+CGG | + | chr5_3:16424088-16424107 | None:intergenic | 45.0% | |
| ! | TGATGGGAGGCTAAAGTACT+TGG | - | chr5_3:16424093-16424112 | Msa0802240:intron | 45.0% |
| TGAATGACTTTGAGCACTCG+GGG | - | chr5_3:16424221-16424240 | Msa0802240:intron | 45.0% | |
| GCACAGCGGAATATGAACAA+CGG | + | chr5_3:16424525-16424544 | None:intergenic | 45.0% | |
| GCATCAGTGTAGCCACTATT+TGG | - | chr5_3:16424557-16424576 | Msa0802240:intron | 45.0% | |
| TGCAACTGAATTGCGTGTCA+AGG | + | chr5_3:16424660-16424679 | None:intergenic | 45.0% | |
| TGGTTGACAATACTCTGACG+TGG | - | chr5_3:16424748-16424767 | Msa0802240:intron | 45.0% | |
| GGTTGACAATACTCTGACGT+GGG | - | chr5_3:16424749-16424768 | Msa0802240:intron | 45.0% | |
| TATGGATGGACCTCAGGTTT+AGG | - | chr5_3:16424785-16424804 | Msa0802240:intron | 45.0% | |
| TCGGATGAAATGGATGCGAA+GGG | + | chr5_3:16424938-16424957 | None:intergenic | 45.0% | |
| ATCGGATGAAATGGATGCGA+AGG | + | chr5_3:16424939-16424958 | None:intergenic | 45.0% | |
| CCACAGTACATCGGATGAAA+TGG | + | chr5_3:16424948-16424967 | None:intergenic | 45.0% | |
| CCATTTCATCCGATGTACTG+TGG | - | chr5_3:16424945-16424964 | Msa0802240:intron | 45.0% | |
| AGTCCATGTTGTAGGCAGTT+TGG | - | chr5_3:16425224-16425243 | Msa0802240:intron | 45.0% | |
| TGCAGCGGCAACAACAAATA+CGG | + | chr5_3:16425310-16425329 | None:intergenic | 45.0% | |
| GGAGAATAGAAGATACTCGG+CGG | + | chr5_3:16425994-16426013 | None:intergenic | 45.0% | |
| TCCTATTTGGAAGACGAGGA+GGG | + | chr5_3:16426060-16426079 | None:intergenic | 45.0% | |
| AGCGATGCCGTTGCATAAAT+CGG | + | chr5_3:16426135-16426154 | None:intergenic | 45.0% | |
| TATGGCCCTATGATACCAGA+TGG | - | chr5_3:16426200-16426219 | Msa0802240:intron | 45.0% | |
| TCAGTTGACAGTGAGATTCG+CGG | - | chr5_3:16426257-16426276 | Msa0802240:intron | 45.0% | |
| GCTCTTTGTTGCCATCCTTT+CGG | - | chr5_3:16426301-16426320 | Msa0802240:intron | 45.0% | |
| ACCAACAAGAACCGAAAGGA+TGG | + | chr5_3:16426315-16426334 | None:intergenic | 45.0% | |
| CAGTACCAACAAGAACCGAA+AGG | + | chr5_3:16426319-16426338 | None:intergenic | 45.0% | |
| ! | GTGCAGTGACTTTTAGCAAG+TGG | - | chr5_3:16426567-16426586 | Msa0802240:five_prime_UTR | 45.0% |
| GCAAGTGGTGTAGAAGGAAT+AGG | - | chr5_3:16426582-16426601 | Msa0802240:five_prime_UTR | 45.0% | |
| !! | TAAATATTATTAAGAAAAAT+GGG | - | chr5_3:16423935-16423954 | Msa0802240:intron | 5.0% |
| TTCAAGGGTCATGCTTTGCC+GGG | - | chr5_3:16423962-16423981 | Msa0802240:intron | 50.0% | |
| GCTCGAACACGAAACGTCTT+AGG | + | chr5_3:16424052-16424071 | None:intergenic | 50.0% | |
| GCTATAGCACTGTAGCACAG+CGG | + | chr5_3:16424539-16424558 | None:intergenic | 50.0% | |
| GACCTCCTTTGTGGTATGGA+TGG | - | chr5_3:16424771-16424790 | Msa0802240:intron | 50.0% | |
| GTCCATCCATACCACAAAGG+AGG | + | chr5_3:16424776-16424795 | None:intergenic | 50.0% | |
| GAGGTCCATCCATACCACAA+AGG | + | chr5_3:16424779-16424798 | None:intergenic | 50.0% | |
| TTGTGGTATGGATGGACCTC+AGG | - | chr5_3:16424779-16424798 | Msa0802240:intron | 50.0% | |
| AGGATTCGTGCCTAAACCTG+AGG | + | chr5_3:16424798-16424817 | None:intergenic | 50.0% | |
| GAGCCAAACTGCCTACAACA+TGG | + | chr5_3:16425230-16425249 | None:intergenic | 50.0% | |
| ATACTCGGCGGAAAATGCCA+TGG | + | chr5_3:16425982-16426001 | None:intergenic | 50.0% | |
| ACCCTCCTCGTCTTCCAAAT+AGG | - | chr5_3:16426056-16426075 | Msa0802240:intron | 50.0% | |
| GTCCTATTTGGAAGACGAGG+AGG | + | chr5_3:16426061-16426080 | None:intergenic | 50.0% | |
| GTTGTTTGGAAGAAGGGCTC+CGG | + | chr5_3:16426105-16426124 | None:intergenic | 50.0% | |
| ATGCCGTTGCATAAATCGGC+TGG | + | chr5_3:16426131-16426150 | None:intergenic | 50.0% | |
| CTTTAGCGCTGCAAGGCATA+TGG | - | chr5_3:16426153-16426172 | Msa0802240:intron | 50.0% | |
| GCCATCCTTTCGGTTCTTGT+TGG | - | chr5_3:16426311-16426330 | Msa0802240:intron | 50.0% | |
| TCAAGGGTCATGCTTTGCCG+GGG | - | chr5_3:16423963-16423982 | Msa0802240:intron | 55.0% | |
| AGACGTTTCGTGTTCGAGCG+TGG | - | chr5_3:16424053-16424072 | Msa0802240:intron | 55.0% | |
| TCGAGCGTGGAATCCTGTAC+CGG | - | chr5_3:16424066-16424085 | Msa0802240:intron | 55.0% | |
| CTCCCATCAAAACCCGGTAC+AGG | + | chr5_3:16424082-16424101 | None:intergenic | 55.0% | |
| !! | CTGTACCGGGTTTTGATGGG+AGG | - | chr5_3:16424080-16424099 | Msa0802240:intron | 55.0% |
| GTGGGACCTCCTTTGTGGTA+TGG | - | chr5_3:16424767-16424786 | Msa0802240:intron | 55.0% | |
| CGGAAAATGCCATGGCAGCT+AGG | + | chr5_3:16425974-16425993 | None:intergenic | 55.0% | |
| TTTGGAAGACGAGGAGGGTG+TGG | + | chr5_3:16426055-16426074 | None:intergenic | 55.0% | |
| CGAGCGTGGAATCCTGTACC+GGG | - | chr5_3:16424067-16424086 | Msa0802240:intron | 60.0% | |
| CTGACGTGGGACCTCCTTTG+TGG | - | chr5_3:16424762-16424781 | Msa0802240:intron | 60.0% | |
| GGCATCGCTTTAGCGCTGCA+AGG | - | chr5_3:16426146-16426165 | Msa0802240:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 16422985 | 16426625 | 16422985 | ID=Msa0802240;Name=Msa0802240 |
| chr5_3 | mRNA | 16422985 | 16426625 | 16422985 | ID=Msa0802240-mRNA-1;Parent=Msa0802240;Name=Msa0802240-mRNA-1;_AED=0.10;_eAED=0.10;_QI=260|1|1|1|0.5|0.33|3|198|278 |
| chr5_3 | exon | 16422985 | 16423672 | 16422985 | ID=Msa0802240-mRNA-1:exon:6904;Parent=Msa0802240-mRNA-1 |
| chr5_3 | exon | 16425311 | 16425770 | 16425311 | ID=Msa0802240-mRNA-1:exon:6903;Parent=Msa0802240-mRNA-1 |
| chr5_3 | exon | 16426479 | 16426625 | 16426479 | ID=Msa0802240-mRNA-1:exon:6902;Parent=Msa0802240-mRNA-1 |
| chr5_3 | five_prime_UTR | 16426479 | 16426625 | 16426479 | ID=Msa0802240-mRNA-1:five_prime_utr;Parent=Msa0802240-mRNA-1 |
| chr5_3 | five_prime_UTR | 16425658 | 16425770 | 16425658 | ID=Msa0802240-mRNA-1:five_prime_utr;Parent=Msa0802240-mRNA-1 |
| chr5_3 | CDS | 16425311 | 16425657 | 16425311 | ID=Msa0802240-mRNA-1:cds;Parent=Msa0802240-mRNA-1 |
| chr5_3 | CDS | 16423183 | 16423672 | 16423183 | ID=Msa0802240-mRNA-1:cds;Parent=Msa0802240-mRNA-1 |
| chr5_3 | three_prime_UTR | 16422985 | 16423182 | 16422985 | ID=Msa0802240-mRNA-1:three_prime_utr;Parent=Msa0802240-mRNA-1 |
| Gene Sequence |
| Protein sequence |
