Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296280 | XP_039684652.1 | 96.698 | 212 | 7 | 0 | 32 | 243 | 140 | 351 | 1.80e-144 | 421 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296280 | sp|Q02926|RB97D_DROME | 40.741 | 81 | 47 | 1 | 118 | 197 | 32 | 112 | 4.46e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296280 | A0A396GMD3 | 96.698 | 212 | 7 | 0 | 32 | 243 | 140 | 351 | 8.59e-145 | 421 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa1296280 | 0.820822 | 5.597574e-53 | -8.615850e-47 |
| Msa0002240 | Msa1296280 | 0.809132 | 2.200902e-50 | -8.615850e-47 |
| Msa0007440 | Msa1296280 | 0.801284 | 9.683186e-49 | -8.615850e-47 |
| Msa0011170 | Msa1296280 | 0.817353 | 3.446856e-52 | -8.615850e-47 |
| Msa0014710 | Msa1296280 | 0.822475 | 2.321842e-53 | -8.615850e-47 |
| Msa0020410 | Msa1296280 | 0.812842 | 3.458144e-51 | -8.615850e-47 |
| Msa0021510 | Msa1296280 | 0.801290 | 9.654693e-49 | -8.615850e-47 |
| Msa0026910 | Msa1296280 | 0.832040 | 1.186097e-55 | -8.615850e-47 |
| Msa0036140 | Msa1296280 | 0.819086 | 1.397177e-52 | -8.615850e-47 |
| Msa0037570 | Msa1296280 | -0.816697 | 4.838405e-52 | -8.615850e-47 |
| Msa0037840 | Msa1296280 | 0.802119 | 6.524923e-49 | -8.615850e-47 |
| Msa0037880 | Msa1296280 | 0.840915 | 6.519673e-58 | -8.615850e-47 |
| Msa0043980 | Msa1296280 | 0.842137 | 3.106166e-58 | -8.615850e-47 |
| Msa0044260 | Msa1296280 | 0.811444 | 6.978416e-51 | -8.615850e-47 |
| Msa0044330 | Msa1296280 | 0.812358 | 4.414593e-51 | -8.615850e-47 |
| Msa0057680 | Msa1296280 | -0.800383 | 1.479127e-48 | -8.615850e-47 |
| Msa0063350 | Msa1296280 | -0.800325 | 1.519854e-48 | -8.615850e-47 |
| Msa0068680 | Msa1296280 | 0.831252 | 1.854798e-55 | -8.615850e-47 |
| Msa0073170 | Msa1296280 | 0.822324 | 2.517806e-53 | -8.615850e-47 |
| Msa0075880 | Msa1296280 | 0.809430 | 1.899356e-50 | -8.615850e-47 |
| Msa0077610 | Msa1296280 | 0.811630 | 6.358142e-51 | -8.615850e-47 |
| Msa0079070 | Msa1296280 | 0.800229 | 1.589582e-48 | -8.615850e-47 |
| Msa0083280 | Msa1296280 | 0.808532 | 2.957345e-50 | -8.615850e-47 |
| Msa0084080 | Msa1296280 | 0.807997 | 3.845841e-50 | -8.615850e-47 |
| Msa0084380 | Msa1296280 | 0.803167 | 3.967221e-49 | -8.615850e-47 |
| Msa0084940 | Msa1296280 | 0.802735 | 4.872306e-49 | -8.615850e-47 |
| Msa0089820 | Msa1296280 | 0.802661 | 5.045776e-49 | -8.615850e-47 |
| Msa0090100 | Msa1296280 | 0.817320 | 3.504806e-52 | -8.615850e-47 |
| Msa0092990 | Msa1296280 | 0.824490 | 7.847744e-54 | -8.615850e-47 |
| Msa0095560 | Msa1296280 | 0.807060 | 6.079302e-50 | -8.615850e-47 |
| Msa0104230 | Msa1296280 | 0.802751 | 4.835160e-49 | -8.615850e-47 |
| Msa0104240 | Msa1296280 | 0.824039 | 1.001830e-53 | -8.615850e-47 |
| Msa0104800 | Msa1296280 | 0.802597 | 5.203126e-49 | -8.615850e-47 |
| Msa0109590 | Msa1296280 | 0.801435 | 9.016485e-49 | -8.615850e-47 |
| Msa0114060 | Msa1296280 | 0.843641 | 1.236984e-58 | -8.615850e-47 |
| Msa0119040 | Msa1296280 | 0.804134 | 2.499206e-49 | -8.615850e-47 |
| Msa0604510 | Msa1296280 | 0.817101 | 3.926898e-52 | -8.615850e-47 |
| Msa0608160 | Msa1296280 | 0.803790 | 2.946089e-49 | -8.615850e-47 |
| Msa0608710 | Msa1296280 | 0.821901 | 3.155391e-53 | -8.615850e-47 |
| Msa0610130 | Msa1296280 | 0.820032 | 8.499101e-53 | -8.615850e-47 |
| Msa0610180 | Msa1296280 | 0.804418 | 2.180899e-49 | -8.615850e-47 |
| Msa0610430 | Msa1296280 | 0.819379 | 1.197749e-52 | -8.615850e-47 |
| Msa0620960 | Msa1296280 | 0.809365 | 1.961422e-50 | -8.615850e-47 |
| Msa0621490 | Msa1296280 | 0.809187 | 2.141337e-50 | -8.615850e-47 |
| Msa0626090 | Msa1296280 | 0.806289 | 8.843384e-50 | -8.615850e-47 |
| Msa0627450 | Msa1296280 | 0.806456 | 8.154361e-50 | -8.615850e-47 |
| Msa0633840 | Msa1296280 | 0.802745 | 4.848885e-49 | -8.615850e-47 |
| Msa0637900 | Msa1296280 | 0.807396 | 5.159569e-50 | -8.615850e-47 |
| Msa0638070 | Msa1296280 | 0.817459 | 3.261324e-52 | -8.615850e-47 |
| Msa0644840 | Msa1296280 | 0.808769 | 2.632427e-50 | -8.615850e-47 |
| Msa0648080 | Msa1296280 | 0.805921 | 1.056967e-49 | -8.615850e-47 |
| Msa0649110 | Msa1296280 | 0.818811 | 1.613063e-52 | -8.615850e-47 |
| Msa0657580 | Msa1296280 | 0.805433 | 1.338112e-49 | -8.615850e-47 |
| Msa0661190 | Msa1296280 | -0.841998 | 3.380912e-58 | -8.615850e-47 |
| Msa0662650 | Msa1296280 | 0.801767 | 7.706976e-49 | -8.615850e-47 |
| Msa0663240 | Msa1296280 | 0.838219 | 3.274398e-57 | -8.615850e-47 |
| Msa0663390 | Msa1296280 | 0.806069 | 9.837704e-50 | -8.615850e-47 |
| Msa0663920 | Msa1296280 | 0.816157 | 6.392014e-52 | -8.615850e-47 |
| Msa0669440 | Msa1296280 | 0.825502 | 4.525729e-54 | -8.615850e-47 |
| Msa0672690 | Msa1296280 | 0.849400 | 3.313257e-60 | -8.615850e-47 |
| Msa0679710 | Msa1296280 | 0.821730 | 3.457169e-53 | -8.615850e-47 |
| Msa0688070 | Msa1296280 | 0.815543 | 8.758739e-52 | -8.615850e-47 |
| Msa0688480 | Msa1296280 | 0.845426 | 4.090402e-59 | -8.615850e-47 |
| Msa0692830 | Msa1296280 | 0.806649 | 7.423978e-50 | -8.615850e-47 |
| Msa0692950 | Msa1296280 | 0.809738 | 1.631476e-50 | -8.615850e-47 |
| Msa0693380 | Msa1296280 | 0.800159 | 1.642818e-48 | -8.615850e-47 |
| Msa0701010 | Msa1296280 | 0.831444 | 1.663509e-55 | -8.615850e-47 |
| Msa0703780 | Msa1296280 | 0.818580 | 1.820553e-52 | -8.615850e-47 |
| Msa0703910 | Msa1296280 | 0.807227 | 5.604179e-50 | -8.615850e-47 |
| Msa0708860 | Msa1296280 | 0.804350 | 2.253421e-49 | -8.615850e-47 |
| Msa0709400 | Msa1296280 | 0.809504 | 1.831214e-50 | -8.615850e-47 |
| Msa0711100 | Msa1296280 | 0.832637 | 8.438703e-56 | -8.615850e-47 |
| Msa0711450 | Msa1296280 | 0.818150 | 2.277176e-52 | -8.615850e-47 |
| Msa0731940 | Msa1296280 | 0.806840 | 6.764193e-50 | -8.615850e-47 |
| Msa0740510 | Msa1296280 | 0.804120 | 2.515900e-49 | -8.615850e-47 |
| Msa0748730 | Msa1296280 | 0.807931 | 3.972463e-50 | -8.615850e-47 |
| Msa0748970 | Msa1296280 | 0.800621 | 1.322668e-48 | -8.615850e-47 |
| Msa0750850 | Msa1296280 | 0.803846 | 2.868431e-49 | -8.615850e-47 |
| Msa0751850 | Msa1296280 | 0.807259 | 5.517133e-50 | -8.615850e-47 |
| Msa0760130 | Msa1296280 | 0.812176 | 4.835810e-51 | -8.615850e-47 |
| Msa0762970 | Msa1296280 | 0.813125 | 2.999028e-51 | -8.615850e-47 |
| Msa0765380 | Msa1296280 | 0.806599 | 7.608545e-50 | -8.615850e-47 |
| Msa0768290 | Msa1296280 | 0.808947 | 2.411249e-50 | -8.615850e-47 |
| Msa0777230 | Msa1296280 | 0.827768 | 1.303816e-54 | -8.615850e-47 |
| Msa0796700 | Msa1296280 | 0.814670 | 1.368601e-51 | -8.615850e-47 |
| Msa0804230 | Msa1296280 | 0.808334 | 3.260048e-50 | -8.615850e-47 |
| Msa0810220 | Msa1296280 | 0.818333 | 2.070620e-52 | -8.615850e-47 |
| Msa0820770 | Msa1296280 | 0.808864 | 2.511769e-50 | -8.615850e-47 |
| Msa0820850 | Msa1296280 | 0.828862 | 7.100176e-55 | -8.615850e-47 |
| Msa0831850 | Msa1296280 | 0.817244 | 3.645931e-52 | -8.615850e-47 |
| Msa0832150 | Msa1296280 | 0.841159 | 5.627922e-58 | -8.615850e-47 |
| Msa0832340 | Msa1296280 | 0.821602 | 3.700361e-53 | -8.615850e-47 |
| Msa0137570 | Msa1296280 | 0.804077 | 2.568830e-49 | -8.615850e-47 |
| Msa0138020 | Msa1296280 | 0.804958 | 1.682233e-49 | -8.615850e-47 |
| Msa0140860 | Msa1296280 | 0.800031 | 1.744258e-48 | -8.615850e-47 |
| Msa0150800 | Msa1296280 | 0.827065 | 1.921509e-54 | -8.615850e-47 |
| Msa0150840 | Msa1296280 | 0.801987 | 6.947943e-49 | -8.615850e-47 |
| Msa0151180 | Msa1296280 | 0.809616 | 1.732715e-50 | -8.615850e-47 |
| Msa0157310 | Msa1296280 | 0.802350 | 5.849509e-49 | -8.615850e-47 |
| Msa0159770 | Msa1296280 | 0.809238 | 2.088103e-50 | -8.615850e-47 |
| Msa0159930 | Msa1296280 | 0.801852 | 7.404695e-49 | -8.615850e-47 |
| Msa0165210 | Msa1296280 | 0.801169 | 1.022047e-48 | -8.615850e-47 |
| Msa0165220 | Msa1296280 | 0.800105 | 1.684674e-48 | -8.615850e-47 |
| Msa0170570 | Msa1296280 | 0.806349 | 8.588761e-50 | -8.615850e-47 |
| Msa0178970 | Msa1296280 | 0.802939 | 4.422698e-49 | -8.615850e-47 |
| Msa0180500 | Msa1296280 | 0.843880 | 1.067320e-58 | -8.615850e-47 |
| Msa0197660 | Msa1296280 | 0.823963 | 1.043744e-53 | -8.615850e-47 |
| Msa0217680 | Msa1296280 | 0.820288 | 7.423036e-53 | -8.615850e-47 |
| Msa0220580 | Msa1296280 | 0.857593 | 1.468109e-62 | -8.615850e-47 |
| Msa0223010 | Msa1296280 | 0.834028 | 3.798003e-56 | -8.615850e-47 |
| Msa0223260 | Msa1296280 | 0.800605 | 1.332649e-48 | -8.615850e-47 |
| Msa0224320 | Msa1296280 | 0.813060 | 3.098645e-51 | -8.615850e-47 |
| Msa1225130 | Msa1296280 | 0.811051 | 8.491898e-51 | -8.615850e-47 |
| Msa1228590 | Msa1296280 | 0.804045 | 2.608293e-49 | -8.615850e-47 |
| Msa1233500 | Msa1296280 | 0.818877 | 1.558601e-52 | -8.615850e-47 |
| Msa1233890 | Msa1296280 | 0.830004 | 3.749080e-55 | -8.615850e-47 |
| Msa1237980 | Msa1296280 | 0.841524 | 4.509100e-58 | -8.615850e-47 |
| Msa1238930 | Msa1296280 | 0.805636 | 1.213162e-49 | -8.615850e-47 |
| Msa1245830 | Msa1296280 | 0.804249 | 2.364844e-49 | -8.615850e-47 |
| Msa1246510 | Msa1296280 | 0.811298 | 7.507824e-51 | -8.615850e-47 |
| Msa1247250 | Msa1296280 | 0.808912 | 2.452973e-50 | -8.615850e-47 |
| Msa1253020 | Msa1296280 | 0.805857 | 1.090138e-49 | -8.615850e-47 |
| Msa1276440 | Msa1296280 | 0.837161 | 6.119487e-57 | -8.615850e-47 |
| Msa1277660 | Msa1296280 | 0.814939 | 1.193335e-51 | -8.615850e-47 |
| Msa1281510 | Msa1296280 | 0.811217 | 7.819942e-51 | -8.615850e-47 |
| Msa1282580 | Msa1296280 | -0.801975 | 6.987670e-49 | -8.615850e-47 |
| Msa1284680 | Msa1296280 | 0.811820 | 5.783118e-51 | -8.615850e-47 |
| Msa1287460 | Msa1296280 | 0.817558 | 3.098907e-52 | -8.615850e-47 |
| Msa1294820 | Msa1296280 | 0.804976 | 1.667705e-49 | -8.615850e-47 |
| Msa1296280 | Msa1296940 | 0.830751 | 2.461930e-55 | -8.615850e-47 |
| Msa1296280 | Msa1299290 | -0.810754 | 9.851241e-51 | -8.615850e-47 |
| Msa1296280 | Msa1305340 | 0.805630 | 1.216445e-49 | -8.615850e-47 |
| Msa1296280 | Msa1305660 | 0.810790 | 9.673635e-51 | -8.615850e-47 |
| Msa1296280 | Msa1306760 | 0.828645 | 8.014136e-55 | -8.615850e-47 |
| Msa1296280 | Msa1306840 | 0.838098 | 3.518718e-57 | -8.615850e-47 |
| Msa1296280 | Msa1306850 | 0.819950 | 8.870339e-53 | -8.615850e-47 |
| Msa1296280 | Msa1318990 | 0.800286 | 1.547923e-48 | -8.615850e-47 |
| Msa1296280 | Msa1331000 | 0.832515 | 9.045705e-56 | -8.615850e-47 |
| Msa1296280 | Msa1331320 | 0.812968 | 3.246278e-51 | -8.615850e-47 |
| Msa1296280 | Msa1332040 | -0.813131 | 2.988689e-51 | -8.615850e-47 |
| Msa1296280 | Msa1343760 | 0.810598 | 1.064611e-50 | -8.615850e-47 |
| Msa1296280 | Msa1345220 | 0.807666 | 4.522456e-50 | -8.615850e-47 |
| Msa1296280 | Msa1348560 | 0.802367 | 5.801837e-49 | -8.615850e-47 |
| Msa1296280 | Msa1353470 | 0.800048 | 1.730394e-48 | -8.615850e-47 |
| Msa1296280 | Msa1358610 | -0.805756 | 1.144698e-49 | -8.615850e-47 |
| Msa1296280 | Msa1359040 | 0.829415 | 5.214784e-55 | -8.615850e-47 |
| Msa1296280 | Msa1359650 | -0.826953 | 2.044320e-54 | -8.615850e-47 |
| Msa1296280 | Msa1374470 | 0.801650 | 8.147932e-49 | -8.615850e-47 |
| Msa1296280 | Msa1395900 | 0.820502 | 6.631573e-53 | -8.615850e-47 |
| Msa1296280 | Msa1397120 | 0.816693 | 4.848509e-52 | -8.615850e-47 |
| Msa1296280 | Msa1400870 | -0.802437 | 5.611614e-49 | -8.615850e-47 |
| Msa1296280 | Msa1402730 | 0.803992 | 2.674750e-49 | -8.615850e-47 |
| Msa1296280 | Msa1403340 | 0.816803 | 4.579674e-52 | -8.615850e-47 |
| Msa1296280 | Msa1403890 | 0.816362 | 5.751691e-52 | -8.615850e-47 |
| Msa1296280 | Msa1411020 | 0.829011 | 6.533004e-55 | -8.615850e-47 |
| Msa1296280 | Msa1412640 | 0.814832 | 1.260212e-51 | -8.615850e-47 |
| Msa1296280 | Msa1418850 | 0.801291 | 9.648758e-49 | -8.615850e-47 |
| Msa1296280 | Msa1420490 | 0.820177 | 7.872660e-53 | -8.615850e-47 |
| Msa1296280 | Msa1420820 | 0.804170 | 2.456408e-49 | -8.615850e-47 |
| Msa1296280 | Msa1423390 | 0.822542 | 2.240403e-53 | -8.615850e-47 |
| Msa1296280 | Msa1424290 | 0.825142 | 5.506649e-54 | -8.615850e-47 |
| Msa1296280 | Msa1424450 | 0.833438 | 5.332109e-56 | -8.615850e-47 |
| Msa1296280 | Msa1426030 | 0.805716 | 1.167226e-49 | -8.615850e-47 |
| Msa1296280 | Msa1427230 | 0.838776 | 2.352490e-57 | -8.615850e-47 |
| Msa1296280 | Msa1434350 | 0.825338 | 4.951362e-54 | -8.615850e-47 |
| Msa1296280 | Msa1436480 | 0.800745 | 1.247559e-48 | -8.615850e-47 |
| Msa1296280 | Msa1439320 | 0.827708 | 1.347713e-54 | -8.615850e-47 |
| Msa1296280 | Msa1440370 | 0.820206 | 7.753284e-53 | -8.615850e-47 |
| Msa1296280 | Msa1440810 | 0.826902 | 2.102528e-54 | -8.615850e-47 |
| Msa1296280 | Msa1444740 | 0.842836 | 2.026771e-58 | -8.615850e-47 |
| Msa1296280 | Msa1451550 | 0.800123 | 1.670571e-48 | -8.615850e-47 |
| Msa1296280 | Msa1451620 | -0.811474 | 6.875873e-51 | -8.615850e-47 |
| Msa1296280 | Msa1452240 | 0.804255 | 2.358275e-49 | -8.615850e-47 |
| Msa1296280 | Msa1453560 | 0.818598 | 1.802921e-52 | -8.615850e-47 |
| Msa1296280 | Msa1454620 | 0.803239 | 3.832896e-49 | -8.615850e-47 |
| Msa1296280 | Msa1458750 | 0.822047 | 2.919688e-53 | -8.615850e-47 |
| Msa1296280 | Msa1460050 | 0.837437 | 5.200558e-57 | -8.615850e-47 |
| Msa1296280 | Msa1460830 | 0.836547 | 8.776791e-57 | -8.615850e-47 |
| Msa1296280 | Msa1462290 | 0.813571 | 2.392844e-51 | -8.615850e-47 |
| Msa1296280 | Msa1466540 | 0.808196 | 3.488187e-50 | -8.615850e-47 |
| Msa0366240 | Msa1296280 | 0.804496 | 2.100522e-49 | -8.615850e-47 |
| Msa0369440 | Msa1296280 | 0.809569 | 1.773663e-50 | -8.615850e-47 |
| Msa0376910 | Msa1296280 | 0.814519 | 1.478692e-51 | -8.615850e-47 |
| Msa0379640 | Msa1296280 | 0.818392 | 2.008162e-52 | -8.615850e-47 |
| Msa0383800 | Msa1296280 | 0.811893 | 5.574863e-51 | -8.615850e-47 |
| Msa0394340 | Msa1296280 | 0.809362 | 1.964641e-50 | -8.615850e-47 |
| Msa0401610 | Msa1296280 | 0.821216 | 4.542747e-53 | -8.615850e-47 |
| Msa0412840 | Msa1296280 | 0.812666 | 3.779562e-51 | -8.615850e-47 |
| Msa0416300 | Msa1296280 | 0.837815 | 4.160472e-57 | -8.615850e-47 |
| Msa0424320 | Msa1296280 | 0.815695 | 8.102393e-52 | -8.615850e-47 |
| Msa0425790 | Msa1296280 | 0.822280 | 2.578292e-53 | -8.615850e-47 |
| Msa0433410 | Msa1296280 | -0.808823 | 2.562949e-50 | -8.615850e-47 |
| Msa0434180 | Msa1296280 | 0.814692 | 1.353871e-51 | -8.615850e-47 |
| Msa0436760 | Msa1296280 | 0.818611 | 1.790511e-52 | -8.615850e-47 |
| Msa0442200 | Msa1296280 | 0.801376 | 9.272429e-49 | -8.615850e-47 |
| Msa0442610 | Msa1296280 | 0.816150 | 6.412759e-52 | -8.615850e-47 |
| Msa0446270 | Msa1296280 | 0.825103 | 5.627086e-54 | -8.615850e-47 |
| Msa0453200 | Msa1296280 | 0.831083 | 2.041356e-55 | -8.615850e-47 |
| Msa0467640 | Msa1296280 | -0.818190 | 2.230598e-52 | -8.615850e-47 |
| Msa0471900 | Msa1296280 | 0.807229 | 5.597026e-50 | -8.615850e-47 |
| Msa0472960 | Msa1296280 | -0.823996 | 1.025422e-53 | -8.615850e-47 |
| Msa0477130 | Msa1296280 | -0.831664 | 1.468623e-55 | -8.615850e-47 |
| Msa0479820 | Msa1296280 | 0.803335 | 3.661909e-49 | -8.615850e-47 |
| Msa0481530 | Msa1296280 | 0.800625 | 1.320073e-48 | -8.615850e-47 |
| Msa0991400 | Msa1296280 | 0.805870 | 1.083535e-49 | -8.615850e-47 |
| Msa0993600 | Msa1296280 | 0.802147 | 6.440171e-49 | -8.615850e-47 |
| Msa0998690 | Msa1296280 | 0.800910 | 1.154747e-48 | -8.615850e-47 |
| Msa1000860 | Msa1296280 | 0.804995 | 1.652995e-49 | -8.615850e-47 |
| Msa1000890 | Msa1296280 | 0.805849 | 1.094504e-49 | -8.615850e-47 |
| Msa1000900 | Msa1296280 | 0.818024 | 2.431954e-52 | -8.615850e-47 |
| Msa1001390 | Msa1296280 | 0.818580 | 1.819795e-52 | -8.615850e-47 |
| Msa1002850 | Msa1296280 | 0.806691 | 7.274815e-50 | -8.615850e-47 |
| Msa1009070 | Msa1296280 | 0.804428 | 2.170549e-49 | -8.615850e-47 |
| Msa1012830 | Msa1296280 | 0.810206 | 1.293766e-50 | -8.615850e-47 |
| Msa1014540 | Msa1296280 | 0.842419 | 2.616324e-58 | -8.615850e-47 |
| Msa1034150 | Msa1296280 | 0.815843 | 7.510148e-52 | -8.615850e-47 |
| Msa1035480 | Msa1296280 | 0.800897 | 1.161656e-48 | -8.615850e-47 |
| Msa1036610 | Msa1296280 | 0.801215 | 1.000145e-48 | -8.615850e-47 |
| Msa1039880 | Msa1296280 | 0.821169 | 4.656826e-53 | -8.615850e-47 |
| Msa1043390 | Msa1296280 | 0.810760 | 9.818273e-51 | -8.615850e-47 |
| Msa1043450 | Msa1296280 | 0.802804 | 4.715366e-49 | -8.615850e-47 |
| Msa1052330 | Msa1296280 | 0.813959 | 1.965148e-51 | -8.615850e-47 |
| Msa1058710 | Msa1296280 | 0.824178 | 9.291092e-54 | -8.615850e-47 |
| Msa1063510 | Msa1296280 | 0.831176 | 1.936582e-55 | -8.615850e-47 |
| Msa1075220 | Msa1296280 | -0.800014 | 1.758235e-48 | -8.615850e-47 |
| Msa1075540 | Msa1296280 | 0.843749 | 1.156958e-58 | -8.615850e-47 |
| Msa1075650 | Msa1296280 | 0.809512 | 1.823817e-50 | -8.615850e-47 |
| Msa1082500 | Msa1296280 | 0.822857 | 1.892525e-53 | -8.615850e-47 |
| Msa1090260 | Msa1296280 | 0.811654 | 6.284396e-51 | -8.615850e-47 |
| Msa1102790 | Msa1296280 | 0.809609 | 1.738410e-50 | -8.615850e-47 |
| Msa0239800 | Msa1296280 | 0.822898 | 1.851638e-53 | -8.615850e-47 |
| Msa0243710 | Msa1296280 | 0.803443 | 3.477499e-49 | -8.615850e-47 |
| Msa0257500 | Msa1296280 | 0.801086 | 1.062847e-48 | -8.615850e-47 |
| Msa0258760 | Msa1296280 | 0.803273 | 3.771567e-49 | -8.615850e-47 |
| Msa0260680 | Msa1296280 | 0.831558 | 1.559864e-55 | -8.615850e-47 |
| Msa0261930 | Msa1296280 | 0.820477 | 6.718201e-53 | -8.615850e-47 |
| Msa0265380 | Msa1296280 | 0.803943 | 2.738380e-49 | -8.615850e-47 |
| Msa0269450 | Msa1296280 | 0.803237 | 3.837501e-49 | -8.615850e-47 |
| Msa0277820 | Msa1296280 | 0.801280 | 9.699251e-49 | -8.615850e-47 |
| Msa0278110 | Msa1296280 | 0.835218 | 1.907137e-56 | -8.615850e-47 |
| Msa0280090 | Msa1296280 | 0.846243 | 2.455028e-59 | -8.615850e-47 |
| Msa0287410 | Msa1296280 | 0.834472 | 2.938895e-56 | -8.615850e-47 |
| Msa0288100 | Msa1296280 | 0.819890 | 9.156653e-53 | -8.615850e-47 |
| Msa0291500 | Msa1296280 | 0.815885 | 7.348962e-52 | -8.615850e-47 |
| Msa0298460 | Msa1296280 | 0.811652 | 6.291228e-51 | -8.615850e-47 |
| Msa0302580 | Msa1296280 | -0.800939 | 1.138830e-48 | -8.615850e-47 |
| Msa0316900 | Msa1296280 | 0.810257 | 1.260867e-50 | -8.615850e-47 |
| Msa0317510 | Msa1296280 | 0.823851 | 1.108733e-53 | -8.615850e-47 |
| Msa0318980 | Msa1296280 | 0.801059 | 1.076674e-48 | -8.615850e-47 |
| Msa0319170 | Msa1296280 | 0.816033 | 6.812041e-52 | -8.615850e-47 |
| Msa0325800 | Msa1296280 | 0.807962 | 3.911284e-50 | -8.615850e-47 |
| Msa0325830 | Msa1296280 | 0.821081 | 4.879842e-53 | -8.615850e-47 |
| Msa0326110 | Msa1296280 | 0.807788 | 4.259142e-50 | -8.615850e-47 |
| Msa0326520 | Msa1296280 | 0.810409 | 1.169208e-50 | -8.615850e-47 |
| Msa0329350 | Msa1296280 | 0.825843 | 3.758052e-54 | -8.615850e-47 |
| Msa0333030 | Msa1296280 | 0.800693 | 1.278415e-48 | -8.615850e-47 |
| Msa0336420 | Msa1296280 | 0.803877 | 2.826061e-49 | -8.615850e-47 |
| Msa0339620 | Msa1296280 | 0.836620 | 8.410706e-57 | -8.615850e-47 |
| Msa0342750 | Msa1296280 | 0.810940 | 8.979485e-51 | -8.615850e-47 |
| Msa0347360 | Msa1296280 | 0.801579 | 8.424960e-49 | -8.615850e-47 |
| Msa0350990 | Msa1296280 | 0.818721 | 1.691260e-52 | -8.615850e-47 |
| Msa0351030 | Msa1296280 | 0.819911 | 9.057582e-53 | -8.615850e-47 |
| Msa0351100 | Msa1296280 | 0.801173 | 1.020415e-48 | -8.615850e-47 |
| Msa0359030 | Msa1296280 | 0.825391 | 4.809487e-54 | -8.615850e-47 |
| Msa1109680 | Msa1296280 | 0.824647 | 7.205225e-54 | -8.615850e-47 |
| Msa1114350 | Msa1296280 | -0.819448 | 1.155140e-52 | -8.615850e-47 |
| Msa1124540 | Msa1296280 | -0.801064 | 1.073933e-48 | -8.615850e-47 |
| Msa1124960 | Msa1296280 | 0.807173 | 5.752489e-50 | -8.615850e-47 |
| Msa1131220 | Msa1296280 | 0.810322 | 1.221347e-50 | -8.615850e-47 |
| Msa1137570 | Msa1296280 | 0.808542 | 2.943093e-50 | -8.615850e-47 |
| Msa1147970 | Msa1296280 | 0.807629 | 4.603815e-50 | -8.615850e-47 |
| Msa1154280 | Msa1296280 | 0.844346 | 8.001005e-59 | -8.615850e-47 |
| Msa1156020 | Msa1296280 | 0.825206 | 5.317997e-54 | -8.615850e-47 |
| Msa1167340 | Msa1296280 | 0.820548 | 6.472379e-53 | -8.615850e-47 |
| Msa1172400 | Msa1296280 | 0.810027 | 1.413652e-50 | -8.615850e-47 |
| Msa1174040 | Msa1296280 | 0.829137 | 6.091716e-55 | -8.615850e-47 |
| Msa1178110 | Msa1296280 | 0.804729 | 1.878157e-49 | -8.615850e-47 |
| Msa1181250 | Msa1296280 | 0.821351 | 4.228578e-53 | -8.615850e-47 |
| Msa1181330 | Msa1296280 | 0.813338 | 2.692563e-51 | -8.615850e-47 |
| Msa1183100 | Msa1296280 | -0.806564 | 7.737333e-50 | -8.615850e-47 |
| Msa1199220 | Msa1296280 | 0.803149 | 4.000498e-49 | -8.615850e-47 |
| Msa1203880 | Msa1296280 | 0.818584 | 1.816014e-52 | -8.615850e-47 |
| Msa1204530 | Msa1296280 | 0.835846 | 1.323033e-56 | -8.615850e-47 |
| Msa1204630 | Msa1296280 | 0.818969 | 1.485071e-52 | -8.615850e-47 |
| Msa1211140 | Msa1296280 | -0.819468 | 1.142982e-52 | -8.615850e-47 |
| Msa1214480 | Msa1296280 | 0.801982 | 6.962385e-49 | -8.615850e-47 |
| Msa1215920 | Msa1296280 | 0.812611 | 3.885316e-51 | -8.615850e-47 |
| Msa1224480 | Msa1296280 | 0.817086 | 3.958117e-52 | -8.615850e-47 |
| Msa0484720 | Msa1296280 | 0.801027 | 1.092879e-48 | -8.615850e-47 |
| Msa0484780 | Msa1296280 | 0.823419 | 1.399381e-53 | -8.615850e-47 |
| Msa0493630 | Msa1296280 | 0.809662 | 1.693503e-50 | -8.615850e-47 |
| Msa0512750 | Msa1296280 | 0.820341 | 7.219490e-53 | -8.615850e-47 |
| Msa0512900 | Msa1296280 | 0.807430 | 5.074067e-50 | -8.615850e-47 |
| Msa0514070 | Msa1296280 | -0.811832 | 5.748344e-51 | -8.615850e-47 |
| Msa0518380 | Msa1296280 | 0.828594 | 8.243813e-55 | -8.615850e-47 |
| Msa0519000 | Msa1296280 | 0.842863 | 1.993714e-58 | -8.615850e-47 |
| Msa0523460 | Msa1296280 | 0.803720 | 3.046943e-49 | -8.615850e-47 |
| Msa0523940 | Msa1296280 | 0.821020 | 5.041056e-53 | -8.615850e-47 |
| Msa0562440 | Msa1296280 | 0.830059 | 3.634782e-55 | -8.615850e-47 |
| Msa0563840 | Msa1296280 | 0.829554 | 4.823511e-55 | -8.615850e-47 |
| Msa0577500 | Msa1296280 | 0.834164 | 3.510634e-56 | -8.615850e-47 |
| Msa0585230 | Msa1296280 | 0.853991 | 1.657002e-61 | -8.615850e-47 |
| Msa0585560 | Msa1296280 | 0.800588 | 1.343302e-48 | -8.615850e-47 |
| Msa0593650 | Msa1296280 | 0.804119 | 2.517303e-49 | -8.615850e-47 |
| Msa0597330 | Msa1296280 | 0.801115 | 1.048258e-48 | -8.615850e-47 |
| Msa0844490 | Msa1296280 | 0.815974 | 7.020412e-52 | -8.615850e-47 |
| Msa0849030 | Msa1296280 | 0.826623 | 2.450360e-54 | -8.615850e-47 |
| Msa0857640 | Msa1296280 | 0.825537 | 4.442000e-54 | -8.615850e-47 |
| Msa0861090 | Msa1296280 | 0.808808 | 2.582057e-50 | -8.615850e-47 |
| Msa0861130 | Msa1296280 | 0.825562 | 4.380502e-54 | -8.615850e-47 |
| Msa0866550 | Msa1296280 | 0.811400 | 7.134294e-51 | -8.615850e-47 |
| Msa0868700 | Msa1296280 | 0.820695 | 5.986556e-53 | -8.615850e-47 |
| Msa0877250 | Msa1296280 | 0.813074 | 3.076202e-51 | -8.615850e-47 |
| Msa0907950 | Msa1296280 | 0.824266 | 8.857676e-54 | -8.615850e-47 |
| Msa0922410 | Msa1296280 | 0.810766 | 9.789757e-51 | -8.615850e-47 |
| Msa0924310 | Msa1296280 | 0.821251 | 4.460283e-53 | -8.615850e-47 |
| Msa0927380 | Msa1296280 | 0.814126 | 1.805180e-51 | -8.615850e-47 |
| Msa0931520 | Msa1296280 | 0.832850 | 7.472341e-56 | -8.615850e-47 |
| Msa0936300 | Msa1296280 | 0.836779 | 7.662841e-57 | -8.615850e-47 |
| Msa0945970 | Msa1296280 | 0.807378 | 5.203974e-50 | -8.615850e-47 |
| Msa0946690 | Msa1296280 | -0.818855 | 1.576652e-52 | -8.615850e-47 |
| Msa0947660 | Msa1296280 | 0.816094 | 6.602103e-52 | -8.615850e-47 |
| Msa0953120 | Msa1296280 | 0.808261 | 3.378187e-50 | -8.615850e-47 |
| Msa0963270 | Msa1296280 | 0.800429 | 1.447150e-48 | -8.615850e-47 |
| Msa0964900 | Msa1296280 | 0.803426 | 3.505537e-49 | -8.615850e-47 |
| Msa0968680 | Msa1296280 | 0.807473 | 4.968942e-50 | -8.615850e-47 |
| Msa0969520 | Msa1296280 | 0.826155 | 3.168306e-54 | -8.615850e-47 |
| Msa0969810 | Msa1296280 | 0.839170 | 1.859272e-57 | -8.615850e-47 |
| Msa0973100 | Msa1296280 | 0.826122 | 3.225885e-54 | -8.615850e-47 |
| Msa0976670 | Msa1296280 | 0.805220 | 1.482983e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296280 | MtrunA17_Chr8g0375101 | 96.698 | 212 | 7 | 0 | 32 | 243 | 140 | 351 | 1.65e-148 | 421 |
| Msa1296280 | MtrunA17_Chr8g0375101 | 24.645 | 211 | 94 | 3 | 13 | 204 | 15 | 179 | 5.30e-14 | 71.6 |
| Msa1296280 | MtrunA17_Chr5g0402191 | 66.805 | 241 | 69 | 3 | 35 | 274 | 143 | 373 | 8.35e-100 | 298 |
| Msa1296280 | MtrunA17_Chr5g0402191 | 36.792 | 106 | 60 | 3 | 112 | 216 | 87 | 186 | 2.41e-14 | 72.8 |
| Msa1296280 | MtrunA17_Chr3g0101061 | 42.697 | 89 | 46 | 3 | 109 | 194 | 131 | 217 | 6.92e-12 | 65.9 |
| Msa1296280 | MtrunA17_Chr1g0186351 | 41.573 | 89 | 50 | 2 | 117 | 204 | 111 | 198 | 7.74e-12 | 65.5 |
| Msa1296280 | MtrunA17_Chr3g0135111 | 29.167 | 168 | 90 | 4 | 37 | 202 | 63 | 203 | 8.11e-11 | 62.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1296280 | AT4G36960.1 | 59.471 | 227 | 64 | 6 | 35 | 242 | 142 | 359 | 2.20e-79 | 246 |
| Msa1296280 | AT4G36960.1 | 35.556 | 90 | 57 | 1 | 111 | 200 | 85 | 173 | 2.75e-13 | 70.1 |
| Msa1296280 | AT4G36960.2 | 59.471 | 227 | 64 | 6 | 35 | 242 | 142 | 359 | 2.20e-79 | 246 |
| Msa1296280 | AT4G36960.2 | 35.556 | 90 | 57 | 1 | 111 | 200 | 85 | 173 | 2.75e-13 | 70.1 |
| Msa1296280 | AT5G40490.1 | 46.053 | 76 | 41 | 0 | 119 | 194 | 43 | 118 | 7.12e-12 | 65.9 |
| Msa1296280 | AT5G47620.4 | 37.864 | 103 | 60 | 2 | 109 | 210 | 119 | 218 | 1.42e-11 | 65.1 |
| Msa1296280 | AT5G47620.3 | 37.864 | 103 | 60 | 2 | 109 | 210 | 37 | 136 | 1.45e-11 | 65.1 |
| Msa1296280 | AT5G47620.1 | 37.864 | 103 | 60 | 2 | 109 | 210 | 97 | 196 | 1.90e-11 | 64.7 |
| Msa1296280 | AT5G47620.2 | 37.864 | 103 | 60 | 2 | 109 | 210 | 97 | 196 | 1.90e-11 | 64.7 |
| Msa1296280 | AT5G47620.5 | 37.864 | 103 | 60 | 2 | 109 | 210 | 97 | 196 | 1.90e-11 | 64.7 |
| Msa1296280 | AT5G55550.10 | 37.692 | 130 | 71 | 5 | 115 | 238 | 154 | 279 | 2.59e-11 | 64.7 |
| Msa1296280 | AT5G55550.8 | 37.692 | 130 | 71 | 5 | 115 | 238 | 154 | 279 | 2.89e-11 | 64.3 |
| Msa1296280 | AT3G13224.1 | 41.176 | 85 | 47 | 1 | 119 | 203 | 20 | 101 | 3.44e-11 | 62.4 |
| Msa1296280 | AT5G55550.2 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 5.46e-11 | 63.5 |
| Msa1296280 | AT5G55550.3 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 5.46e-11 | 63.5 |
| Msa1296280 | AT5G55550.6 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 5.46e-11 | 63.5 |
| Msa1296280 | AT5G55550.11 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 5.46e-11 | 63.5 |
| Msa1296280 | AT5G55550.5 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 6.37e-11 | 63.2 |
| Msa1296280 | AT5G55550.4 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 6.37e-11 | 63.2 |
| Msa1296280 | AT5G55550.9 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 6.37e-11 | 63.2 |
| Msa1296280 | AT5G55550.7 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 6.37e-11 | 63.2 |
| Msa1296280 | AT5G55550.1 | 37.692 | 130 | 71 | 5 | 115 | 238 | 107 | 232 | 6.37e-11 | 63.2 |
Find 80 sgRNAs with CRISPR-Local
Find 264 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATCGTCCAAGTTCTATTTA+TGG | 0.167135 | 8_3:+55390855 | Msa1296280:CDS |
| TGAATAGCATGGATTCTTTC+AGG | 0.201125 | 8_3:+55391756 | Msa1296280:CDS |
| GAAGATCTTCGCCTGTATTT+TGG | 0.207885 | 8_3:+55391030 | Msa1296280:CDS |
| TTTATTTAGCAGTTGGGTTA+TGG | 0.277535 | 8_3:+55392555 | Msa1296280:intron |
| AGACCTGGTCATAGAGGTTT+TGG | 0.289763 | 8_3:+55391173 | Msa1296280:CDS |
| ATATCCTAATTGTGGTGTTC+TGG | 0.305397 | 8_3:-55390766 | None:intergenic |
| GAAAGTCCTGTGAGGCCTTA+TGG | 0.318356 | 8_3:+55391812 | Msa1296280:CDS |
| ATGGATTCTTTCAGGGGATA+TGG | 0.318639 | 8_3:+55391764 | Msa1296280:CDS |
| ACAGGACTTTCATCAAAATA+AGG | 0.344025 | 8_3:-55391800 | None:intergenic |
| AAATGTTACACATGGTCTTA+AGG | 0.347209 | 8_3:-55392923 | None:intergenic |
| AAAGTCCTGTGAGGCCTTAT+GGG | 0.365563 | 8_3:+55391813 | Msa1296280:CDS |
| AAGAGGTGCGGCTGAATCTA+TGG | 0.366406 | 8_3:-55391702 | None:intergenic |
| TACCTCCAATCTGTTCTTGA+TGG | 0.370499 | 8_3:-55392594 | None:intergenic |
| AGAACCAGAACACCACAATT+AGG | 0.378388 | 8_3:+55390762 | Msa1296280:CDS |
| AAAACCATGCTCTCCTAGTA+TGG | 0.385185 | 8_3:-55392621 | None:intergenic |
| GGTGTTCTGGTTCTGCCAAT+TGG | 0.387485 | 8_3:-55390753 | None:intergenic |
| AAAATTGGAACATACTAAAC+TGG | 0.396823 | 8_3:-55392869 | None:intergenic |
| GATGAAAGAAACCCATGAAC+TGG | 0.405707 | 8_3:+55389194 | Msa1296280:CDS |
| TCTTAGATGTTTATATTCCT+AGG | 0.408577 | 8_3:+55391067 | Msa1296280:CDS |
| AGATCTTCAGTGGTTGCCTC+CGG | 0.409448 | 8_3:-55391015 | None:intergenic |
| CGAAGACCTCATGAGATTTG+TGG | 0.411182 | 8_3:+55391239 | Msa1296280:CDS |
| CCTGGCACCCAAGTAGCATT+AGG | 0.419075 | 8_3:-55392661 | None:intergenic |
| GAATATAAACATCTAAGATA+TGG | 0.428824 | 8_3:-55391062 | None:intergenic |
| GAAGATGATTTCAAGCCAAT+TGG | 0.431236 | 8_3:+55390738 | Msa1296280:CDS |
| AAGACCTTCACAGCAGTTCC+TGG | 0.436851 | 8_3:-55392679 | None:intergenic |
| TGAATCTTGTATTCTTTCAC+TGG | 0.436875 | 8_3:+55392801 | Msa1296280:three_prime_UTR |
| TGAAGGTCTTCTATTAAGAA+TGG | 0.446166 | 8_3:+55392692 | Msa1296280:exon |
| CCTAATGCTACTTGGGTGCC+AGG | 0.447386 | 8_3:+55392661 | Msa1296280:CDS |
| ATTGTATTCCTAATGCTACT+TGG | 0.448065 | 8_3:+55392653 | Msa1296280:CDS |
| GTATTATCAGCACTAAGTGT+TGG | 0.449062 | 8_3:+55392721 | Msa1296280:three_prime_UTR |
| GGCCAAATCTTCCAAAATAC+AGG | 0.460551 | 8_3:-55391041 | None:intergenic |
| AATACAAGATTCAAGTTCAA+TGG | 0.471387 | 8_3:-55392791 | None:intergenic |
| GAATAGCATGGATTCTTTCA+GGG | 0.472134 | 8_3:+55391757 | Msa1296280:CDS |
| TTTATCACTTTCGCAACTGC+AGG | 0.473517 | 8_3:+55388694 | Msa1296280:CDS |
| GATCTTCAGTGGTTGCCTCC+GGG | 0.485189 | 8_3:-55391014 | None:intergenic |
| CTTAGATGTTTATATTCCTA+GGG | 0.492283 | 8_3:+55391068 | Msa1296280:CDS |
| CTATCGTACATTCTCCCATA+AGG | 0.499170 | 8_3:-55391827 | None:intergenic |
| TCATCAAAATAAGGCCTCAC+TGG | 0.510366 | 8_3:-55391791 | None:intergenic |
| TTGTATTCCTAATGCTACTT+GGG | 0.510474 | 8_3:+55392654 | Msa1296280:CDS |
| TACTCACATCATCGAAGTCC+AGG | 0.510528 | 8_3:-55391850 | None:intergenic |
| CTGGGACCTGCTTCATCAAG+AGG | 0.513895 | 8_3:-55391719 | None:intergenic |
| ATGAAAGAAACCCATGAACT+GGG | 0.513956 | 8_3:+55389195 | Msa1296280:CDS |
| CTTGGACGATCATACATAGT+TGG | 0.515791 | 8_3:-55390843 | None:intergenic |
| GGTGCCAGGAACTGCTGTGA+AGG | 0.523218 | 8_3:+55392675 | Msa1296280:CDS |
| TTGGAGGTATAGACCATACT+AGG | 0.531535 | 8_3:+55392608 | Msa1296280:CDS |
| GCCGCACCTCTTGATGAAGC+AGG | 0.539023 | 8_3:+55391713 | Msa1296280:CDS |
| TTACTTCCATAAATAGAACT+TGG | 0.539729 | 8_3:-55390861 | None:intergenic |
| AATAGCATGGATTCTTTCAG+GGG | 0.553215 | 8_3:+55391758 | Msa1296280:CDS |
| GATTCTTTCAGGGGATATGG+TGG | 0.557418 | 8_3:+55391767 | Msa1296280:CDS |
| GAAGACCATCAAGAACAGAT+TGG | 0.558221 | 8_3:+55392589 | Msa1296280:CDS |
| ATTCTCCCATAAGGCCTCAC+AGG | 0.558379 | 8_3:-55391818 | None:intergenic |
| GAATACTATGTTGAATAGCA+TGG | 0.561559 | 8_3:+55391745 | Msa1296280:CDS |
| GTCAAGAGACCTGGTCATAG+AGG | 0.564977 | 8_3:+55391167 | Msa1296280:CDS |
| GCTGCATATCTAGTTGATGC+AGG | 0.566523 | 8_3:-55390810 | None:intergenic |
| TTGATGAAGCAGGTCCCAGC+GGG | 0.569473 | 8_3:+55391723 | Msa1296280:CDS |
| TCAACTAGATATGCAGCACT+TGG | 0.574058 | 8_3:+55390816 | Msa1296280:CDS |
| ATTCAACATAGTATTCCCGC+TGG | 0.576854 | 8_3:-55391738 | None:intergenic |
| ATCTTCAGTGGTTGCCTCCG+GGG | 0.582125 | 8_3:-55391013 | None:intergenic |
| ATTTATTTCCAACAGGATCG+TGG | 0.586353 | 8_3:+55388646 | Msa1296280:CDS |
| ATCTAGGATGTCAAGAGACC+TGG | 0.586442 | 8_3:+55391158 | Msa1296280:intron |
| TCTTCAGTGGTTGCCTCCGG+GGG | 0.593961 | 8_3:-55391012 | None:intergenic |
| GGTTGATCGAGCAACACCTA+AGG | 0.598411 | 8_3:+55389233 | Msa1296280:CDS |
| GACCATCAAGAACAGATTGG+AGG | 0.610737 | 8_3:+55392592 | Msa1296280:CDS |
| TATGCACTATATCCTAATTG+TGG | 0.612610 | 8_3:-55390774 | None:intergenic |
| ACCTGCTTCATCAAGAGGTG+CGG | 0.620107 | 8_3:-55391714 | None:intergenic |
| TATTTGCGTTGCAGATTCTG+TGG | 0.620366 | 8_3:+55389164 | Msa1296280:CDS |
| GAAAGAAACCCATGAACTGG+GGG | 0.622961 | 8_3:+55389197 | Msa1296280:CDS |
| TAGACCATACTAGGAGAGCA+TGG | 0.630667 | 8_3:+55392617 | Msa1296280:CDS |
| TTCAACATAGTATTCCCGCT+GGG | 0.636793 | 8_3:-55391737 | None:intergenic |
| GGGGATATGGTGGTCCAGTG+AGG | 0.637555 | 8_3:+55391777 | Msa1296280:CDS |
| AAACCAAAACCTCTATGACC+AGG | 0.657073 | 8_3:-55391176 | None:intergenic |
| TCGTGTCCACAAATCTCATG+AGG | 0.660049 | 8_3:-55391245 | None:intergenic |
| TGAAAGAAACCCATGAACTG+GGG | 0.667691 | 8_3:+55389196 | Msa1296280:CDS |
| TTAGGAGGAGAACCTGCCCG+TGG | 0.676903 | 8_3:+55390958 | Msa1296280:intron |
| TAGGAGGAGAACCTGCCCGT+GGG | 0.685808 | 8_3:+55390959 | Msa1296280:intron |
| ATACAGGCGAAGATCTTCAG+TGG | 0.686546 | 8_3:-55391025 | None:intergenic |
| TCATGAGATTTGTGGACACG+AGG | 0.697795 | 8_3:+55391247 | Msa1296280:CDS |
| CTTGATGAAGCAGGTCCCAG+CGG | 0.706120 | 8_3:+55391722 | Msa1296280:CDS |
| AAAGAAACCCATGAACTGGG+GGG | 0.745104 | 8_3:+55389198 | Msa1296280:CDS |
| GTAGCATTAGGAATACAATG+CGG | 0.835615 | 8_3:-55392649 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGAACTTATATTTATTTTA+TGG | + | chr8_3:55389045-55389064 | Msa1296280:intron | 10.0% |
| !!! | TGAACTTATATTTATTTTAT+GGG | + | chr8_3:55389046-55389065 | Msa1296280:intron | 10.0% |
| !! | CAAAAAAAAATAAAATTATC+TGG | - | chr8_3:55392769-55392788 | None:intergenic | 10.0% |
| !!! | TATAGTTTGTATTTTATAAC+TGG | + | chr8_3:55389732-55389751 | Msa1296280:intron | 15.0% |
| !! | TTAACAAAAGTAAAAAGAAA+AGG | - | chr8_3:55390695-55390714 | None:intergenic | 15.0% |
| !! | TTTAATCATTATGAAAAAGA+TGG | + | chr8_3:55392413-55392432 | Msa1296280:intron | 15.0% |
| !!! | TTTTATCATTTATTTCCAAC+AGG | + | chr8_3:55388639-55388658 | Msa1296280:CDS | 20.0% |
| !! | ACGATTCTAAATTAAATTTG+AGG | - | chr8_3:55388794-55388813 | None:intergenic | 20.0% |
| !! | AATTGTAATTATGAGTTACT+TGG | + | chr8_3:55389088-55389107 | Msa1296280:intron | 20.0% |
| !! | AATCAGTAATTTAATCTGTA+AGG | + | chr8_3:55389137-55389156 | Msa1296280:intron | 20.0% |
| !! | AACAGTAGAAAACATTAATA+AGG | - | chr8_3:55389310-55389329 | None:intergenic | 20.0% |
| !!! | AGTTAATTAAGGAAAGATTT+TGG | + | chr8_3:55389537-55389556 | Msa1296280:intron | 20.0% |
| !!! | GTTAATTAAGGAAAGATTTT+GGG | + | chr8_3:55389538-55389557 | Msa1296280:intron | 20.0% |
| !!! | TTAATTAAGGAAAGATTTTG+GGG | + | chr8_3:55389539-55389558 | Msa1296280:intron | 20.0% |
| !! | GTTAACTCATAACTTATTAA+AGG | - | chr8_3:55389937-55389956 | None:intergenic | 20.0% |
| !! | TTTAATGTTTATGAGATTGA+TGG | + | chr8_3:55389987-55390006 | Msa1296280:intron | 20.0% |
| !!! | TAGTTTAGATTGTCTAAAAT+AGG | + | chr8_3:55390064-55390083 | Msa1296280:intron | 20.0% |
| !!! | ATAAGCAAAAAGATTTTTGT+TGG | + | chr8_3:55390982-55391001 | Msa1296280:CDS | 20.0% |
| !!! | GAATATAAACATCTAAGATA+TGG | - | chr8_3:55391065-55391084 | None:intergenic | 20.0% |
| !! | ATACTTATAATACACATGAA+TGG | + | chr8_3:55392236-55392255 | Msa1296280:intron | 20.0% |
| !!! | GAATGGTTTTATAACTAATA+CGG | + | chr8_3:55392253-55392272 | Msa1296280:intron | 20.0% |
| !! | ATTCCAAAGAAAGATAAAAT+GGG | - | chr8_3:55392317-55392336 | None:intergenic | 20.0% |
| !! | AAAATGAATGGACAATAAAA+TGG | + | chr8_3:55392469-55392488 | Msa1296280:intron | 20.0% |
| !! | TGTTTATTTATTTAGCAGTT+GGG | + | chr8_3:55392549-55392568 | Msa1296280:intron | 20.0% |
| !!! | ACTGGTTTATAAGATTTTTT+TGG | + | chr8_3:55392819-55392838 | Msa1296280:three_prime_UTR | 20.0% |
| !! | ATACTAGTTCAAGTAAAAAT+TGG | - | chr8_3:55392887-55392906 | None:intergenic | 20.0% |
| ! | TATAGAAATACAGAGAGAAA+AGG | - | chr8_3:55388913-55388932 | None:intergenic | 25.0% |
| !! | ATCTATTGTTCTGAACTATT+GGG | - | chr8_3:55389431-55389450 | None:intergenic | 25.0% |
| !! | AATCTATTGTTCTGAACTAT+TGG | - | chr8_3:55389432-55389451 | None:intergenic | 25.0% |
| !!! | TTTTGTCCTTTTTAAAAACC+CGG | - | chr8_3:55389510-55389529 | None:intergenic | 25.0% |
| !!! | AAATCATTTTCTAAAAAGCC+AGG | - | chr8_3:55389895-55389914 | None:intergenic | 25.0% |
| ! | GAGTTAACTGTTTAATCTAT+TGG | + | chr8_3:55389949-55389968 | Msa1296280:intron | 25.0% |
| ! | TAATCTATTGGATTGAATCA+TGG | + | chr8_3:55389961-55389980 | Msa1296280:intron | 25.0% |
| ! | AATGATGAAATAGAGTGAAT+TGG | + | chr8_3:55390012-55390031 | Msa1296280:intron | 25.0% |
| !! | TTGTCTAAAATAGGATGAAA+TGG | + | chr8_3:55390073-55390092 | Msa1296280:intron | 25.0% |
| ! | TAAAATAGGATGAAATGGAA+TGG | + | chr8_3:55390078-55390097 | Msa1296280:intron | 25.0% |
| !! | CTAATCTGTAATTTAGTCTT+TGG | + | chr8_3:55390297-55390316 | Msa1296280:intron | 25.0% |
| ! | TTATGCATGAAAATGAAAAC+TGG | - | chr8_3:55390627-55390646 | None:intergenic | 25.0% |
| !! | TAATAAGCTGTATTCCATTT+TGG | + | chr8_3:55390712-55390731 | Msa1296280:intron | 25.0% |
| ! | TTACTTCCATAAATAGAACT+TGG | - | chr8_3:55390864-55390883 | None:intergenic | 25.0% |
| ! | TCTTAGATGTTTATATTCCT+AGG | + | chr8_3:55391067-55391086 | Msa1296280:CDS | 25.0% |
| ! | CTTAGATGTTTATATTCCTA+GGG | + | chr8_3:55391068-55391087 | Msa1296280:CDS | 25.0% |
| ! | ATGTAGATTCAATTCAAGTA+GGG | - | chr8_3:55391310-55391329 | None:intergenic | 25.0% |
| ! | AATGTAGATTCAATTCAAGT+AGG | - | chr8_3:55391311-55391330 | None:intergenic | 25.0% |
| ! | ACTAAAGTATAGTTGGTTAT+AGG | + | chr8_3:55392120-55392139 | Msa1296280:intron | 25.0% |
| ! | TAACTAATACGGAAAAGAAA+TGG | + | chr8_3:55392264-55392283 | Msa1296280:intron | 25.0% |
| !! | TTACCCATTTTATCTTTCTT+TGG | + | chr8_3:55392311-55392330 | Msa1296280:intron | 25.0% |
| ! | GATTCCAAAGAAAGATAAAA+TGG | - | chr8_3:55392318-55392337 | None:intergenic | 25.0% |
| ! | ATGGAAAACAACACATATTA+AGG | - | chr8_3:55392349-55392368 | None:intergenic | 25.0% |
| ! | CTGTTTATTTATTTAGCAGT+TGG | + | chr8_3:55392548-55392567 | Msa1296280:intron | 25.0% |
| !! | AATACAAGATTCAAGTTCAA+TGG | - | chr8_3:55392794-55392813 | None:intergenic | 25.0% |
| ! | AAAATTGGAACATACTAAAC+TGG | - | chr8_3:55392872-55392891 | None:intergenic | 25.0% |
| !! | TTTTACTTGAACTAGTATTG+TGG | + | chr8_3:55392889-55392908 | Msa1296280:three_prime_UTR | 25.0% |
| ! | GTACTTAAAAATGTTACACA+TGG | - | chr8_3:55392934-55392953 | None:intergenic | 25.0% |
| ACTAGTATCGTGATAATCAT+TGG | + | chr8_3:55388837-55388856 | Msa1296280:intron | 30.0% | |
| TCTATACATCAATAACACAG+AGG | + | chr8_3:55388927-55388946 | Msa1296280:intron | 30.0% | |
| CTATACATCAATAACACAGA+GGG | + | chr8_3:55388928-55388947 | Msa1296280:intron | 30.0% | |
| ! | TATTTTATGGGACATGTTGT+TGG | + | chr8_3:55389058-55389077 | Msa1296280:intron | 30.0% |
| ! | ATACTTTTATGAACGATGCA+TGG | - | chr8_3:55389377-55389396 | None:intergenic | 30.0% |
| ATGCATCGTTCATAAAAGTA+TGG | + | chr8_3:55389376-55389395 | Msa1296280:intron | 30.0% | |
| ! | TTTTCAAATATGATCTCCCA+AGG | - | chr8_3:55389588-55389607 | None:intergenic | 30.0% |
| CAATGACAAAACCATAAAAG+GGG | - | chr8_3:55389798-55389817 | None:intergenic | 30.0% | |
| CCAATGACAAAACCATAAAA+GGG | - | chr8_3:55389799-55389818 | None:intergenic | 30.0% | |
| ACCAATGACAAAACCATAAA+AGG | - | chr8_3:55389800-55389819 | None:intergenic | 30.0% | |
| TCATTATCTGTTTATTAGCC+TGG | + | chr8_3:55389874-55389893 | Msa1296280:intron | 30.0% | |
| TGGAATGGAACATGATAAAA+TGG | + | chr8_3:55390093-55390112 | Msa1296280:intron | 30.0% | |
| ! | CTGAATAACGAAAGTATGAA+AGG | + | chr8_3:55390232-55390251 | Msa1296280:intron | 30.0% |
| GCTAAACAAATATTCCAGTT+TGG | - | chr8_3:55390262-55390281 | None:intergenic | 30.0% | |
| TTTACAAGTGAAGAAGTAAC+AGG | - | chr8_3:55390329-55390348 | None:intergenic | 30.0% | |
| AATCCAAGATGTTCTCAATA+CGG | + | chr8_3:55390533-55390552 | Msa1296280:intron | 30.0% | |
| AACAAGTTAAATAGAATGCC+GGG | - | chr8_3:55390571-55390590 | None:intergenic | 30.0% | |
| CAACAAGTTAAATAGAATGC+CGG | - | chr8_3:55390572-55390591 | None:intergenic | 30.0% | |
| ! | CATAAGTCTTTGTTTAGTGA+TGG | + | chr8_3:55390642-55390661 | Msa1296280:intron | 30.0% |
| TATGCACTATATCCTAATTG+TGG | - | chr8_3:55390777-55390796 | None:intergenic | 30.0% | |
| TCTATTTATGGAAGTAAGCA+TGG | + | chr8_3:55390867-55390886 | Msa1296280:intron | 30.0% | |
| ! | AAATCTTTTTGCTTATCCCA+CGG | - | chr8_3:55390978-55390997 | None:intergenic | 30.0% |
| CTAGATCAAAATAGAGAGAT+GGG | - | chr8_3:55391144-55391163 | None:intergenic | 30.0% | |
| !!! | TTTTGGTTTTGTGACTTTTG+CGG | + | chr8_3:55391190-55391209 | Msa1296280:CDS | 30.0% |
| GAATACTATGTTGAATAGCA+TGG | + | chr8_3:55391745-55391764 | Msa1296280:CDS | 30.0% | |
| ACAGGACTTTCATCAAAATA+AGG | - | chr8_3:55391803-55391822 | None:intergenic | 30.0% | |
| CGGAAAAGAAATGGTAAATT+AGG | + | chr8_3:55392273-55392292 | Msa1296280:intron | 30.0% | |
| ! | TCCATTCATTTTACATGCAA+GGG | - | chr8_3:55392461-55392480 | None:intergenic | 30.0% |
| TTTATTTAGCAGTTGGGTTA+TGG | + | chr8_3:55392555-55392574 | Msa1296280:intron | 30.0% | |
| ATTGTATTCCTAATGCTACT+TGG | + | chr8_3:55392653-55392672 | Msa1296280:CDS | 30.0% | |
| ! | TTGTATTCCTAATGCTACTT+GGG | + | chr8_3:55392654-55392673 | Msa1296280:CDS | 30.0% |
| TGAAGGTCTTCTATTAAGAA+TGG | + | chr8_3:55392692-55392711 | Msa1296280:exon | 30.0% | |
| TGAATCTTGTATTCTTTCAC+TGG | + | chr8_3:55392801-55392820 | Msa1296280:three_prime_UTR | 30.0% | |
| ! | AAATGTTACACATGGTCTTA+AGG | - | chr8_3:55392926-55392945 | None:intergenic | 30.0% |
| ATTTATTTCCAACAGGATCG+TGG | + | chr8_3:55388646-55388665 | Msa1296280:CDS | 35.0% | |
| TCAAAAACACATCGAGGAAT+TGG | + | chr8_3:55388670-55388689 | Msa1296280:CDS | 35.0% | |
| ATGAAAGAAACCCATGAACT+GGG | + | chr8_3:55389195-55389214 | Msa1296280:CDS | 35.0% | |
| !! | AAGCTCTAAACAATCACCTT+AGG | - | chr8_3:55389252-55389271 | None:intergenic | 35.0% |
| !! | ATTAAGGAAAGATTTTGGGG+AGG | + | chr8_3:55389542-55389561 | Msa1296280:intron | 35.0% |
| TTTGGGGAGGATATGTAATA+TGG | + | chr8_3:55389555-55389574 | Msa1296280:intron | 35.0% | |
| TGTAATATGGATACTCTCCT+TGG | + | chr8_3:55389568-55389587 | Msa1296280:intron | 35.0% | |
| GTAATATGGATACTCTCCTT+GGG | + | chr8_3:55389569-55389588 | Msa1296280:intron | 35.0% | |
| AGTCAAAGAATCAGTCAACA+TGG | + | chr8_3:55389653-55389672 | Msa1296280:intron | 35.0% | |
| TGGTGTGCAAATAAATACTG+AGG | + | chr8_3:55389673-55389692 | Msa1296280:intron | 35.0% | |
| GGTGTGCAAATAAATACTGA+GGG | + | chr8_3:55389674-55389693 | Msa1296280:intron | 35.0% | |
| ATGTATGCCCAGAGTAAAAA+GGG | - | chr8_3:55389766-55389785 | None:intergenic | 35.0% | |
| AATGTATGCCCAGAGTAAAA+AGG | - | chr8_3:55389767-55389786 | None:intergenic | 35.0% | |
| ! | TTTTACTCTGGGCATACATT+TGG | + | chr8_3:55389767-55389786 | Msa1296280:intron | 35.0% |
| !!! | CCCTTTTATGGTTTTGTCAT+TGG | + | chr8_3:55389796-55389815 | Msa1296280:intron | 35.0% |
| GAAAAAAGTGGGATATTGGA+TGG | - | chr8_3:55390126-55390145 | None:intergenic | 35.0% | |
| TCATTTCACTTCACTCGAAT+TGG | - | chr8_3:55390153-55390172 | None:intergenic | 35.0% | |
| GTTGATTATCTATGATGCAC+TGG | + | chr8_3:55390414-55390433 | Msa1296280:intron | 35.0% | |
| ATGTCTAGTATGACACATGA+GGG | - | chr8_3:55390455-55390474 | None:intergenic | 35.0% | |
| TGCATGAAAATGAAAACTGG+TGG | - | chr8_3:55390624-55390643 | None:intergenic | 35.0% | |
| AGGCATGTATGACTATAATC+AGG | - | chr8_3:55390675-55390694 | None:intergenic | 35.0% | |
| AAATCATCTTCCTGCCAAAA+TGG | - | chr8_3:55390729-55390748 | None:intergenic | 35.0% | |
| GAAGATGATTTCAAGCCAAT+TGG | + | chr8_3:55390738-55390757 | Msa1296280:CDS | 35.0% | |
| ATATCCTAATTGTGGTGTTC+TGG | - | chr8_3:55390769-55390788 | None:intergenic | 35.0% | |
| GATCGTCCAAGTTCTATTTA+TGG | + | chr8_3:55390855-55390874 | Msa1296280:CDS | 35.0% | |
| ! | ACTGCTTTGAACTGTCAATT+AGG | + | chr8_3:55390940-55390959 | Msa1296280:intron | 35.0% |
| ! | AATCTTTTTGCTTATCCCAC+GGG | - | chr8_3:55390977-55390996 | None:intergenic | 35.0% |
| CATATTCAACTGTTGAAAGC+TGG | + | chr8_3:55391114-55391133 | Msa1296280:intron | 35.0% | |
| CCTAGATCAAAATAGAGAGA+TGG | - | chr8_3:55391145-55391164 | None:intergenic | 35.0% | |
| !!! | CCATCTCTCTATTTTGATCT+AGG | + | chr8_3:55391142-55391161 | Msa1296280:intron | 35.0% |
| TGAATCTACATTTCCTCGTT+TGG | + | chr8_3:55391319-55391338 | Msa1296280:intron | 35.0% | |
| TACATTTCCTCGTTTGGAAA+TGG | + | chr8_3:55391325-55391344 | Msa1296280:intron | 35.0% | |
| ! | GGAAATGGCATTGAAATAAG+TGG | + | chr8_3:55391340-55391359 | Msa1296280:intron | 35.0% |
| AATCATCTTTGTAGACCATC+TGG | - | chr8_3:55391535-55391554 | None:intergenic | 35.0% | |
| GTAAGTCAAGTTTCAGAACA+AGG | - | chr8_3:55391600-55391619 | None:intergenic | 35.0% | |
| ACAATTACGCTTGGAATACA+TGG | - | chr8_3:55391622-55391641 | None:intergenic | 35.0% | |
| TTGACACATACAATTACGCT+TGG | - | chr8_3:55391631-55391650 | None:intergenic | 35.0% | |
| TGAATAGCATGGATTCTTTC+AGG | + | chr8_3:55391756-55391775 | Msa1296280:CDS | 35.0% | |
| GAATAGCATGGATTCTTTCA+GGG | + | chr8_3:55391757-55391776 | Msa1296280:CDS | 35.0% | |
| AATAGCATGGATTCTTTCAG+GGG | + | chr8_3:55391758-55391777 | Msa1296280:CDS | 35.0% | |
| !! | ATTTTGATGAAAGTCCTGTG+AGG | + | chr8_3:55391804-55391823 | Msa1296280:CDS | 35.0% |
| !! | CTTTCTGAAATCTGAAGACT+TGG | + | chr8_3:55391977-55391996 | Msa1296280:intron | 35.0% |
| CAACTATACTTTAGTGTGTC+AGG | - | chr8_3:55392115-55392134 | None:intergenic | 35.0% | |
| CTGACACACTAAAGTATAGT+TGG | + | chr8_3:55392113-55392132 | Msa1296280:intron | 35.0% | |
| TCCCTTGCATGTAAAATGAA+TGG | + | chr8_3:55392457-55392476 | Msa1296280:intron | 35.0% | |
| ! | GTCCATTCATTTTACATGCA+AGG | - | chr8_3:55392462-55392481 | None:intergenic | 35.0% |
| GTAGCATTAGGAATACAATG+CGG | - | chr8_3:55392652-55392671 | None:intergenic | 35.0% | |
| GTATTATCAGCACTAAGTGT+TGG | + | chr8_3:55392721-55392740 | Msa1296280:three_prime_UTR | 35.0% | |
| GCAAAAACAAAACTTGCAAG+AGG | - | chr8_3:55392850-55392869 | None:intergenic | 35.0% | |
| ! | TTTTTGATCCACGATCCTGT+TGG | - | chr8_3:55388657-55388676 | None:intergenic | 40.0% |
| TTTATCACTTTCGCAACTGC+AGG | + | chr8_3:55388694-55388713 | Msa1296280:CDS | 40.0% | |
| GTACCACAGACAAATAGTGA+CGG | - | chr8_3:55388725-55388744 | None:intergenic | 40.0% | |
| !! | TACTTCTGAGTTCTGAGACA+GGG | + | chr8_3:55388879-55388898 | Msa1296280:intron | 40.0% |
| TTCAAGTCCAGTGAAAACTG+TGG | - | chr8_3:55388973-55388992 | None:intergenic | 40.0% | |
| TATTTGCGTTGCAGATTCTG+TGG | + | chr8_3:55389164-55389183 | Msa1296280:CDS | 40.0% | |
| GATGAAAGAAACCCATGAAC+TGG | + | chr8_3:55389194-55389213 | Msa1296280:CDS | 40.0% | |
| TGAAAGAAACCCATGAACTG+GGG | + | chr8_3:55389196-55389215 | Msa1296280:CDS | 40.0% | |
| ACGATAACTCATCGATAGAC+AGG | + | chr8_3:55389484-55389503 | Msa1296280:intron | 40.0% | |
| ! | TTCAGCTTCCCTTTTTACTC+TGG | + | chr8_3:55389755-55389774 | Msa1296280:intron | 40.0% |
| ! | TCAGCTTCCCTTTTTACTCT+GGG | + | chr8_3:55389756-55389775 | Msa1296280:intron | 40.0% |
| ! | ATTTGGCGTATCCCCTTTTA+TGG | + | chr8_3:55389784-55389803 | Msa1296280:intron | 40.0% |
| AGGGGAAAAAAGTGGGATAT+TGG | - | chr8_3:55390130-55390149 | None:intergenic | 40.0% | |
| GAATTGGAGGGGAAAAAAGT+GGG | - | chr8_3:55390137-55390156 | None:intergenic | 40.0% | |
| TTCACTTCACTCGAATTGGA+GGG | - | chr8_3:55390149-55390168 | None:intergenic | 40.0% | |
| TTTCACTTCACTCGAATTGG+AGG | - | chr8_3:55390150-55390169 | None:intergenic | 40.0% | |
| GTATGAAAGGCAAACCAAAC+TGG | + | chr8_3:55390245-55390264 | Msa1296280:intron | 40.0% | |
| GATTATCTATGATGCACTGG+TGG | + | chr8_3:55390417-55390436 | Msa1296280:intron | 40.0% | |
| TGTCTAGTATGACACATGAG+GGG | - | chr8_3:55390454-55390473 | None:intergenic | 40.0% | |
| CATGTCTAGTATGACACATG+AGG | - | chr8_3:55390456-55390475 | None:intergenic | 40.0% | |
| ! | TGAAAACTGGTGGTGTGAAA+CGG | - | chr8_3:55390614-55390633 | None:intergenic | 40.0% |
| !! | AAGCTGTATTCCATTTTGGC+AGG | + | chr8_3:55390716-55390735 | Msa1296280:intron | 40.0% |
| AGAACCAGAACACCACAATT+AGG | + | chr8_3:55390762-55390781 | Msa1296280:CDS | 40.0% | |
| TCAACTAGATATGCAGCACT+TGG | + | chr8_3:55390816-55390835 | Msa1296280:CDS | 40.0% | |
| CTTGGACGATCATACATAGT+TGG | - | chr8_3:55390846-55390865 | None:intergenic | 40.0% | |
| ! | GCTTTGAACTGTCAATTAGG+AGG | + | chr8_3:55390943-55390962 | Msa1296280:intron | 40.0% |
| ! | GAAGATCTTCGCCTGTATTT+TGG | + | chr8_3:55391030-55391049 | Msa1296280:CDS | 40.0% |
| !! | CGCCTGTATTTTGGAAGATT+TGG | + | chr8_3:55391039-55391058 | Msa1296280:CDS | 40.0% |
| GGCCAAATCTTCCAAAATAC+AGG | - | chr8_3:55391044-55391063 | None:intergenic | 40.0% | |
| TGACATCTTAATCTCACCCT+AGG | - | chr8_3:55391087-55391106 | None:intergenic | 40.0% | |
| AAACCAAAACCTCTATGACC+AGG | - | chr8_3:55391179-55391198 | None:intergenic | 40.0% | |
| ! | TTCAATGCCATTTCCAAACG+AGG | - | chr8_3:55391335-55391354 | None:intergenic | 40.0% |
| CAAAAGAAATTTGCGCTGTC+AGG | - | chr8_3:55391491-55391510 | None:intergenic | 40.0% | |
| CATGTCGAAAAATGTCCAGA+TGG | + | chr8_3:55391517-55391536 | Msa1296280:intron | 40.0% | |
| TTCAACATAGTATTCCCGCT+GGG | - | chr8_3:55391740-55391759 | None:intergenic | 40.0% | |
| ATTCAACATAGTATTCCCGC+TGG | - | chr8_3:55391741-55391760 | None:intergenic | 40.0% | |
| ATGGATTCTTTCAGGGGATA+TGG | + | chr8_3:55391764-55391783 | Msa1296280:CDS | 40.0% | |
| TCATCAAAATAAGGCCTCAC+TGG | - | chr8_3:55391794-55391813 | None:intergenic | 40.0% | |
| CTATCGTACATTCTCCCATA+AGG | - | chr8_3:55391830-55391849 | None:intergenic | 40.0% | |
| GACAGTAAGCTGAAGAAAAC+TGG | + | chr8_3:55391926-55391945 | Msa1296280:intron | 40.0% | |
| AAAACGGAACTTTGGCTAAC+AGG | - | chr8_3:55392159-55392178 | None:intergenic | 40.0% | |
| CTGTTAGCAAAACGGAACTT+TGG | - | chr8_3:55392167-55392186 | None:intergenic | 40.0% | |
| TCCTGCTTCTGTTAGCAAAA+CGG | - | chr8_3:55392175-55392194 | None:intergenic | 40.0% | |
| ! | AAGAAGCATGCGACTAGATT+CGG | - | chr8_3:55392499-55392518 | None:intergenic | 40.0% |
| GAAGACCATCAAGAACAGAT+TGG | + | chr8_3:55392589-55392608 | Msa1296280:CDS | 40.0% | |
| TACCTCCAATCTGTTCTTGA+TGG | - | chr8_3:55392597-55392616 | None:intergenic | 40.0% | |
| ! | TTGGAGGTATAGACCATACT+AGG | + | chr8_3:55392608-55392627 | Msa1296280:CDS | 40.0% |
| AAAACCATGCTCTCCTAGTA+TGG | - | chr8_3:55392624-55392643 | None:intergenic | 40.0% | |
| CGTGGATCAAAAACACATCG+AGG | + | chr8_3:55388664-55388683 | Msa1296280:CDS | 45.0% | |
| !! | GTACTTCTGAGTTCTGAGAC+AGG | + | chr8_3:55388878-55388897 | Msa1296280:intron | 45.0% |
| ! | ATTCCAGCCACAGTTTTCAC+TGG | + | chr8_3:55388963-55388982 | Msa1296280:intron | 45.0% |
| GAAAGAAACCCATGAACTGG+GGG | + | chr8_3:55389197-55389216 | Msa1296280:CDS | 45.0% | |
| AAAGAAACCCATGAACTGGG+GGG | + | chr8_3:55389198-55389217 | Msa1296280:CDS | 45.0% | |
| TAACTCATCGATAGACAGGC+CGG | + | chr8_3:55389488-55389507 | Msa1296280:intron | 45.0% | |
| !! | GACAGGCCGGGTTTTTAAAA+AGG | + | chr8_3:55389501-55389520 | Msa1296280:intron | 45.0% |
| CGAATTGGAGGGGAAAAAAG+TGG | - | chr8_3:55390138-55390157 | None:intergenic | 45.0% | |
| TCACTTCACTCGAATTGGAG+GGG | - | chr8_3:55390148-55390167 | None:intergenic | 45.0% | |
| AATATGCTGTCGACACACGT+TGG | + | chr8_3:55390480-55390499 | Msa1296280:intron | 45.0% | |
| ACGCCGTATTGAGAACATCT+TGG | - | chr8_3:55390539-55390558 | None:intergenic | 45.0% | |
| ! | GAAAACTGGTGGTGTGAAAC+GGG | - | chr8_3:55390613-55390632 | None:intergenic | 45.0% |
| ! | GCTGCATATCTAGTTGATGC+AGG | - | chr8_3:55390813-55390832 | None:intergenic | 45.0% |
| ATACAGGCGAAGATCTTCAG+TGG | - | chr8_3:55391028-55391047 | None:intergenic | 45.0% | |
| ! | ATCTAGGATGTCAAGAGACC+TGG | + | chr8_3:55391158-55391177 | Msa1296280:intron | 45.0% |
| ! | AGACCTGGTCATAGAGGTTT+TGG | + | chr8_3:55391173-55391192 | Msa1296280:CDS | 45.0% |
| ! | TTTGTGACTTTTGCGGACAG+TGG | + | chr8_3:55391197-55391216 | Msa1296280:CDS | 45.0% |
| CGAAGACCTCATGAGATTTG+TGG | + | chr8_3:55391239-55391258 | Msa1296280:CDS | 45.0% | |
| TCGTGTCCACAAATCTCATG+AGG | - | chr8_3:55391248-55391267 | None:intergenic | 45.0% | |
| TCATGAGATTTGTGGACACG+AGG | + | chr8_3:55391247-55391266 | Msa1296280:CDS | 45.0% | |
| ! | GGACACGAGGTACTTTGATT+TGG | + | chr8_3:55391260-55391279 | Msa1296280:intron | 45.0% |
| ATCACTGCAAGCAGTAAGGA+GGG | - | chr8_3:55391392-55391411 | None:intergenic | 45.0% | |
| GTAGATCACTGCAAGCAGTA+AGG | - | chr8_3:55391396-55391415 | None:intergenic | 45.0% | |
| TTTGTGAATCATGCTCCTGC+AGG | + | chr8_3:55391676-55391695 | Msa1296280:intron | 45.0% | |
| GATTCTTTCAGGGGATATGG+TGG | + | chr8_3:55391767-55391786 | Msa1296280:CDS | 45.0% | |
| ! | AAAGTCCTGTGAGGCCTTAT+GGG | + | chr8_3:55391813-55391832 | Msa1296280:CDS | 45.0% |
| TACTCACATCATCGAAGTCC+AGG | - | chr8_3:55391853-55391872 | None:intergenic | 45.0% | |
| ! | TCCGTTTTGCTAACAGAAGC+AGG | + | chr8_3:55392171-55392190 | Msa1296280:intron | 45.0% |
| CACTTGCAAGATGAGTACGA+TGG | - | chr8_3:55392368-55392387 | None:intergenic | 45.0% | |
| ! | AGAAGCATGCGACTAGATTC+GGG | - | chr8_3:55392498-55392517 | None:intergenic | 45.0% |
| ! | AGTCGCATGCTTCTTGCTTT+TGG | + | chr8_3:55392504-55392523 | Msa1296280:intron | 45.0% |
| GACCATCAAGAACAGATTGG+AGG | + | chr8_3:55392592-55392611 | Msa1296280:CDS | 45.0% | |
| TAGACCATACTAGGAGAGCA+TGG | + | chr8_3:55392617-55392636 | Msa1296280:CDS | 45.0% | |
| !!! | CTAGGAGAGCATGGTTTTGT+TGG | + | chr8_3:55392626-55392645 | Msa1296280:CDS | 45.0% |
| !!! | AAAAAATTTAAAGTTAATTA+AGG | + | chr8_3:55389526-55389545 | Msa1296280:intron | 5.0% |
| CACTTTCGCAACTGCAGGTT+TGG | + | chr8_3:55388699-55388718 | Msa1296280:intron | 50.0% | |
| TGGCCGTCACTATTTGTCTG+TGG | + | chr8_3:55388719-55388738 | Msa1296280:intron | 50.0% | |
| AGTCCAGTGAAAACTGTGGC+TGG | - | chr8_3:55388969-55388988 | None:intergenic | 50.0% | |
| ATCAGAACCCCCCAGTTCAT+GGG | - | chr8_3:55389208-55389227 | None:intergenic | 50.0% | |
| GGTTGATCGAGCAACACCTA+AGG | + | chr8_3:55389233-55389252 | Msa1296280:CDS | 50.0% | |
| AACTCATCGATAGACAGGCC+GGG | + | chr8_3:55389489-55389508 | Msa1296280:intron | 50.0% | |
| !! | GGTGTTCTGGTTCTGCCAAT+TGG | - | chr8_3:55390756-55390775 | None:intergenic | 50.0% |
| ! | TTTTTGCTTATCCCACGGGC+AGG | - | chr8_3:55390973-55390992 | None:intergenic | 50.0% |
| ! | TTTTGTTGGTCGTCTTCCCC+CGG | + | chr8_3:55390996-55391015 | Msa1296280:CDS | 50.0% |
| AGATCTTCAGTGGTTGCCTC+CGG | - | chr8_3:55391018-55391037 | None:intergenic | 50.0% | |
| GTCAAGAGACCTGGTCATAG+AGG | + | chr8_3:55391167-55391186 | Msa1296280:CDS | 50.0% | |
| TCACTGCAAGCAGTAAGGAG+GGG | - | chr8_3:55391391-55391410 | None:intergenic | 50.0% | |
| GATCACTGCAAGCAGTAAGG+AGG | - | chr8_3:55391393-55391412 | None:intergenic | 50.0% | |
| TGCGCTGTCAGGAATCATGT+AGG | - | chr8_3:55391480-55391499 | None:intergenic | 50.0% | |
| CTGAATCTATGGCAACCTGC+AGG | - | chr8_3:55391694-55391713 | None:intergenic | 50.0% | |
| ! | AAGAGGTGCGGCTGAATCTA+TGG | - | chr8_3:55391705-55391724 | None:intergenic | 50.0% |
| ACCTGCTTCATCAAGAGGTG+CGG | - | chr8_3:55391717-55391736 | None:intergenic | 50.0% | |
| GAAAGTCCTGTGAGGCCTTA+TGG | + | chr8_3:55391812-55391831 | Msa1296280:CDS | 50.0% | |
| ATTCTCCCATAAGGCCTCAC+AGG | - | chr8_3:55391821-55391840 | None:intergenic | 50.0% | |
| TGGGAGAATGTACGATAGCC+TGG | + | chr8_3:55391832-55391851 | Msa1296280:CDS | 50.0% | |
| GGCTAACAGGTTAGCAGACT+GGG | - | chr8_3:55392146-55392165 | None:intergenic | 50.0% | |
| TGGCTAACAGGTTAGCAGAC+TGG | - | chr8_3:55392147-55392166 | None:intergenic | 50.0% | |
| AAGACCTTCACAGCAGTTCC+TGG | - | chr8_3:55392682-55392701 | None:intergenic | 50.0% | |
| CATCAGAACCCCCCAGTTCA+TGG | - | chr8_3:55389209-55389228 | None:intergenic | 55.0% | |
| ! | TGAACTGGGGGGTTCTGATG+TGG | + | chr8_3:55389209-55389228 | Msa1296280:CDS | 55.0% |
| ATACGGCGTCAACACACACC+CGG | + | chr8_3:55390550-55390569 | Msa1296280:intron | 55.0% | |
| ATCTTCAGTGGTTGCCTCCG+GGG | - | chr8_3:55391016-55391035 | None:intergenic | 55.0% | |
| GATCTTCAGTGGTTGCCTCC+GGG | - | chr8_3:55391017-55391036 | None:intergenic | 55.0% | |
| ACTGCAAGCAGTAAGGAGGG+GGG | - | chr8_3:55391389-55391408 | None:intergenic | 55.0% | |
| CACTGCAAGCAGTAAGGAGG+GGG | - | chr8_3:55391390-55391409 | None:intergenic | 55.0% | |
| CTGGGACCTGCTTCATCAAG+AGG | - | chr8_3:55391722-55391741 | None:intergenic | 55.0% | |
| CTTGATGAAGCAGGTCCCAG+CGG | + | chr8_3:55391722-55391741 | Msa1296280:CDS | 55.0% | |
| TTGATGAAGCAGGTCCCAGC+GGG | + | chr8_3:55391723-55391742 | Msa1296280:CDS | 55.0% | |
| CCTGGCACCCAAGTAGCATT+AGG | - | chr8_3:55392664-55392683 | None:intergenic | 55.0% | |
| ! | CCTAATGCTACTTGGGTGCC+AGG | + | chr8_3:55392661-55392680 | Msa1296280:CDS | 55.0% |
| ! | ACTGGGGGGTTCTGATGTGG+TGG | + | chr8_3:55389212-55389231 | Msa1296280:CDS | 60.0% |
| TTAGGAGGAGAACCTGCCCG+TGG | + | chr8_3:55390958-55390977 | Msa1296280:intron | 60.0% | |
| TAGGAGGAGAACCTGCCCGT+GGG | + | chr8_3:55390959-55390978 | Msa1296280:intron | 60.0% | |
| TCTTCAGTGGTTGCCTCCGG+GGG | - | chr8_3:55391015-55391034 | None:intergenic | 60.0% | |
| GCCGCACCTCTTGATGAAGC+AGG | + | chr8_3:55391713-55391732 | Msa1296280:CDS | 60.0% | |
| GGGGATATGGTGGTCCAGTG+AGG | + | chr8_3:55391777-55391796 | Msa1296280:CDS | 60.0% | |
| GGTGCCAGGAACTGCTGTGA+AGG | + | chr8_3:55392675-55392694 | Msa1296280:CDS | 60.0% | |
| TGTTGGTCGTCTTCCCCCGG+AGG | + | chr8_3:55390999-55391018 | Msa1296280:CDS | 65.0% | |
| GCAAGCAGTAAGGAGGGGGG+AGG | - | chr8_3:55391386-55391405 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 55388629 | 55392971 | 55388629 | ID=Msa1296280;Name=Msa1296280 |
| chr8_3 | mRNA | 55388629 | 55392971 | 55388629 | ID=Msa1296280-mRNA-1;Parent=Msa1296280;Name=Msa1296280-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.66|0.57|1|0.83|1|7|263|305 |
| chr8_3 | exon | 55388629 | 55388715 | 55388629 | ID=Msa1296280-mRNA-1:exon:15886;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55389159 | 55389254 | 55389159 | ID=Msa1296280-mRNA-1:exon:15887;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55390738 | 55390879 | 55390738 | ID=Msa1296280-mRNA-1:exon:15888;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55390962 | 55391089 | 55390962 | ID=Msa1296280-mRNA-1:exon:15889;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55391164 | 55391268 | 55391164 | ID=Msa1296280-mRNA-1:exon:15890;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55391698 | 55391915 | 55391698 | ID=Msa1296280-mRNA-1:exon:15891;Parent=Msa1296280-mRNA-1 |
| chr8_3 | exon | 55392567 | 55392971 | 55392567 | ID=Msa1296280-mRNA-1:exon:15892;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55388629 | 55388715 | 55388629 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55389159 | 55389254 | 55389159 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55390738 | 55390879 | 55390738 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55390962 | 55391089 | 55390962 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55391164 | 55391268 | 55391164 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55391698 | 55391915 | 55391698 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | CDS | 55392567 | 55392708 | 55392567 | ID=Msa1296280-mRNA-1:cds;Parent=Msa1296280-mRNA-1 |
| chr8_3 | three_prime_UTR | 55392709 | 55392971 | 55392709 | ID=Msa1296280-mRNA-1:three_prime_utr;Parent=Msa1296280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
