AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079230

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079230 MtrunA17_Chr1g0190121 100.000 319 0 0 1 319 1 319 0.0 665
Msa0079230 MtrunA17_Chr7g0274931 92.790 319 23 0 1 319 1 319 0.0 632
Msa0079230 MtrunA17_Chr5g0436061 89.073 302 32 1 1 301 17 318 0.0 567
Msa0079230 MtrunA17_Chr1g0186811 82.748 313 54 0 1 313 1 313 0.0 564
Msa0079230 MtrunA17_Chr1g0167751 82.555 321 55 1 1 320 1 321 0.0 563
Msa0079230 MtrunA17_Chr8g0387541 79.114 316 64 2 1 315 1 315 0.0 539
Msa0079230 MtrunA17_Chr8g0334361 80.623 289 56 0 6 294 4 292 0.0 504
Msa0079230 MtrunA17_Chr7g0272371 74.843 318 74 2 1 318 5 316 1.77e-180 501
Msa0079230 MtrunA17_Chr7g0268381 45.608 296 159 2 4 298 5 299 6.51e-98 291
Msa0079230 MtrunA17_Chr8g0364041 46.488 299 151 3 3 300 4 294 1.87e-97 290
Msa0079230 MtrunA17_Chr5g0445011 47.464 276 144 1 26 300 17 292 8.31e-97 288
Msa0079230 MtrunA17_Chr8g0378521 45.918 294 150 3 6 298 9 294 1.99e-96 287
Msa0079230 MtrunA17_Chr5g0415261 45.819 299 153 3 3 300 4 294 2.45e-95 285
Msa0079230 MtrunA17_Chr1g0165341 42.652 279 157 3 25 301 15 292 2.53e-90 271
Msa0079230 MtrunA17_Chr2g0322121 46.926 309 147 7 3 294 638 946 2.72e-82 268
Msa0079230 MtrunA17_Chr4g0025471 46.926 309 147 7 3 294 643 951 3.64e-82 268
Msa0079230 MtrunA17_Chr3g0097231 43.182 264 143 4 22 279 184 446 1.28e-70 227
Msa0079230 MtrunA17_Chr2g0330311 42.570 249 134 6 38 279 227 473 2.69e-64 211
Msa0079230 MtrunA17_Chr2g0330331 42.231 251 137 5 39 282 66 315 7.45e-61 197
Msa0079230 MtrunA17_Chr1g0196211 46.939 196 94 5 108 294 2 196 1.50e-52 173
Msa0079230 MtrunA17_Chr8g0369981 30.746 335 162 11 33 297 100 434 2.82e-37 138
Msa0079230 MtrunA17_Chr1g0196221 46.491 114 52 2 3 107 522 635 4.61e-24 102
Msa0079230 MtrunA17_Chr2g0330011 36.134 119 66 4 31 140 232 349 6.87e-17 80.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079230 AT2G39840.1 89.073 302 32 1 1 301 14 315 0.0 568
Msa0079230 AT5G59160.3 85.479 303 42 2 1 301 9 311 0.0 547
Msa0079230 AT5G59160.2 85.479 303 42 2 1 301 9 311 0.0 547
Msa0079230 AT5G59160.1 85.479 303 42 2 1 301 9 311 0.0 547
Msa0079230 AT2G29400.1 85.099 302 41 3 1 299 15 315 0.0 546
Msa0079230 AT3G46820.1 82.508 303 51 1 1 301 9 311 0.0 535
Msa0079230 AT1G64040.1 79.114 316 64 2 1 315 1 315 0.0 534
Msa0079230 AT5G43380.1 79.355 310 64 0 1 310 1 310 0.0 528
Msa0079230 AT5G43380.2 77.812 320 71 0 1 320 1 320 0.0 528
Msa0079230 AT5G43380.3 79.355 310 64 0 1 310 1 310 0.0 526
Msa0079230 AT4G11240.1 75.232 323 78 2 1 322 1 322 0.0 520
Msa0079230 AT5G27840.4 80.000 295 57 1 1 295 9 301 0.0 503
Msa0079230 AT5G27840.2 80.000 295 57 1 1 295 9 301 0.0 503
Msa0079230 AT5G27840.3 80.000 295 57 1 1 295 9 301 0.0 503
Msa0079230 AT5G27840.1 80.000 295 57 1 1 295 9 301 0.0 503
Msa0079230 AT3G05580.1 80.000 295 57 1 1 295 9 301 2.79e-179 498
Msa0079230 AT3G05580.2 79.675 246 48 1 1 246 9 252 1.14e-145 410
Msa0079230 AT2G42500.1 46.939 294 147 3 6 298 14 299 5.88e-100 297
Msa0079230 AT5G55260.1 47.826 276 143 1 26 300 17 292 5.53e-99 294
Msa0079230 AT3G58500.1 46.259 294 149 3 6 298 14 299 2.99e-98 293
Msa0079230 AT1G10430.2 45.946 296 151 3 6 300 7 294 3.16e-96 287
Msa0079230 AT1G10430.1 45.946 296 151 3 6 300 7 294 3.16e-96 287
Msa0079230 AT1G69960.1 45.608 296 152 3 6 300 8 295 4.83e-96 286
Msa0079230 AT4G26720.1 45.290 276 150 1 26 300 17 292 4.83e-96 286
Msa0079230 AT1G59830.1 45.270 296 153 3 6 300 7 294 1.42e-94 283
Msa0079230 AT5G55260.2 41.640 317 143 2 26 300 17 333 1.31e-90 274
Msa0079230 AT3G19980.1 42.294 279 158 3 25 301 15 292 2.55e-89 270
Msa0079230 AT1G50370.1 41.935 279 159 3 25 301 15 292 2.75e-89 269
Msa0079230 AT4G03080.1 46.452 310 147 8 3 294 524 832 3.29e-83 269
Msa0079230 AT1G59830.2 47.791 249 121 3 6 253 7 247 1.41e-82 251
Msa0079230 AT2G27210.2 46.278 309 149 7 3 294 644 952 4.78e-81 265
Msa0079230 AT2G27210.1 46.278 309 149 7 3 294 649 957 5.42e-81 265
Msa0079230 AT1G08420.1 46.429 308 148 7 4 294 661 968 1.99e-80 263
Msa0079230 AT1G08420.2 46.429 308 148 7 4 294 656 963 2.11e-80 263
Msa0079230 AT2G42500.2 49.321 221 110 2 79 298 33 252 1.12e-77 238
Msa0079230 AT1G03445.2 45.775 284 137 7 26 294 476 757 2.24e-77 252
Msa0079230 AT1G03445.1 45.775 284 137 7 26 294 476 757 2.48e-77 252
Msa0079230 AT2G42810.1 42.966 263 143 4 23 279 187 448 1.13e-68 222
Msa0079230 AT2G42810.5 42.966 263 143 4 23 279 187 448 1.13e-68 222
Msa0079230 AT2G42810.4 42.966 263 143 4 23 279 187 448 1.13e-68 222
Msa0079230 AT2G42810.2 40.845 284 157 5 2 279 224 502 2.53e-68 223
Msa0079230 AT2G42810.3 40.845 284 157 5 2 279 223 501 2.75e-68 223
Msa0079230 AT2G42500.4 44.910 167 81 4 6 168 14 173 3.37e-46 155
Msa0079230 AT2G42500.5 45.087 173 82 5 6 174 14 177 4.02e-46 154
Msa0079230 AT2G42500.3 46.541 159 74 4 6 160 14 165 1.40e-45 153
Msa0079230 AT5G63870.1 31.325 332 160 12 33 297 52 382 1.38e-35 133
Msa0079230 AT5G63870.2 31.325 332 160 12 33 297 52 382 1.38e-35 133
Msa0079230 AT5G63870.3 31.984 247 128 6 33 239 52 298 4.25e-29 113
Msa0079230 AT1G48120.1 29.530 298 150 7 31 268 628 925 8.40e-27 111
Msa0079230 AT5G10900.2 29.965 287 156 10 34 277 199 483 5.35e-24 102
Msa0079230 AT5G10900.3 29.965 287 156 10 34 277 199 483 5.80e-24 102
Msa0079230 AT5G10900.1 32.068 237 134 7 34 245 199 433 6.85e-24 102

Find 104 sgRNAs with CRISPR-Local

Find 429 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTCTCCTGACTTACATAATT+TGG 0.116324 1_2:+57006923 Msa0079230:CDS
TAGAAAGTAATTATTAAAAT+AGG 0.125460 1_2:+57007863 Msa0079230:three_prime_UTR
TATCAGCTGGCTTTAATATT+TGG 0.125928 1_2:-57007597 None:intergenic
CTCACATAACTTCGGATTAT+TGG 0.154032 1_2:+57008018 Msa0079230:three_prime_UTR
CTTGCAGCAACCTAATTTAT+TGG 0.157351 1_2:+57002781 Msa0079230:CDS
TGTATGATGCTTCTAGAATT+TGG 0.194871 1_2:+57007833 Msa0079230:three_prime_UTR
TATCACAACAACGCAGAATT+TGG 0.223163 1_2:+57007890 Msa0079230:three_prime_UTR
AGAAAGTAATTATTAAAATA+GGG 0.250006 1_2:+57007864 Msa0079230:three_prime_UTR
GTCAATATTCTGATCTTCTA+AGG 0.254833 1_2:+57006595 Msa0079230:CDS
GCTTCAAGCTCCAATAAATT+AGG 0.261678 1_2:-57002791 None:intergenic
GCTTCTATTAACCGTATATA+TGG 0.271123 1_2:+57006777 Msa0079230:CDS
ACACCTGCTGGAGAGTTTCC+TGG 0.299462 1_2:-57007661 None:intergenic
GTTTCTTCAGAAGCATGATT+TGG 0.317593 1_2:+57007097 Msa0079230:CDS
GGGATTTGATTGATTTAATT+AGG 0.319581 1_2:-57002326 None:intergenic
GAAGGTTCAATGTAAGGATA+TGG 0.319884 1_2:+57006820 Msa0079230:CDS
AAATTACCACAAATCTTAAT+AGG 0.331310 1_2:-57002815 None:intergenic
AGAGATGGAACAAGCAGTTT+TGG 0.343273 1_2:+57002652 Msa0079230:intron
TCTTATTTGCCGTGCTCATC+AGG 0.350335 1_2:+57007121 Msa0079230:CDS
CGGTGTCGTTTAGAGGTTTA+CGG 0.366473 1_2:-57002435 None:intergenic
TCGCAAAGCAAACCTGTATC+AGG 0.371447 1_2:-57006981 None:intergenic
CAACCTTGAACTTCTTTGCT+AGG 0.376807 1_2:-57007020 None:intergenic
TATGTGAGAAATGGTTAATA+TGG 0.377805 1_2:-57008003 None:intergenic
TAGTCGTGCAAGAAAGCATT+TGG 0.386899 1_2:+57008063 Msa0079230:three_prime_UTR
ATTGATTCATCCAATGGCTT+TGG 0.389357 1_2:-57008152 None:intergenic
GACAGCTGAACCTGCTTCCC+TGG 0.395189 1_2:-57002713 None:intergenic
GTTTGCTTTGCGATCTCCTC+TGG 0.402187 1_2:+57006991 Msa0079230:CDS
AGAGGAACGGTGTCGTTTAG+AGG 0.402913 1_2:-57002442 None:intergenic
CCGACTGATGTGCCTGATAC+AGG 0.405760 1_2:+57006969 Msa0079230:CDS
CATCATAAAATCCATATATA+CGG 0.411444 1_2:-57006788 None:intergenic
GAAGCACCTATTAAGATTTG+TGG 0.413609 1_2:+57002809 Msa0079230:CDS
ACAACGCAGAATTTGGAGAT+AGG 0.415475 1_2:+57007897 Msa0079230:three_prime_UTR
ATATACATTTGGTGCTGATA+AGG 0.419606 1_2:+57007067 Msa0079230:CDS
GGTTAATAGAAGCACATTCA+TGG 0.425951 1_2:-57006767 None:intergenic
ATCCGAAGTTATGTGAGAAA+TGG 0.428040 1_2:-57008012 None:intergenic
TCAAACTCCCCACAGTAATT+AGG 0.429403 1_2:-57007526 None:intergenic
TAGCAAAGAAGTTCAAGGTT+GGG 0.430512 1_2:+57007022 Msa0079230:CDS
CTTCCTACCTTTACACCTGC+TGG 0.435417 1_2:-57007673 None:intergenic
AACCTTGAACTTCTTTGCTA+GGG 0.443540 1_2:-57007019 None:intergenic
AGTCGTGCAAGAAAGCATTT+GGG 0.444539 1_2:+57008064 Msa0079230:three_prime_UTR
GATATGAGTTCTTTGCTAAC+CGG 0.448265 1_2:+57007479 Msa0079230:CDS
GAAACAATTGATTCATCCAA+TGG 0.460426 1_2:-57008158 None:intergenic
GAAAGTAATTATTAAAATAG+GGG 0.461068 1_2:+57007865 Msa0079230:three_prime_UTR
GTAAAAGAAGGTTCAATGTA+AGG 0.466323 1_2:+57006814 Msa0079230:CDS
TGATCCAAATTATGTAAGTC+AGG 0.467364 1_2:-57006927 None:intergenic
AGGGGAGTGTCATATACATT+TGG 0.476024 1_2:+57007056 Msa0079230:CDS
CTTGAAGTTCGTAGCCGTCC+AGG 0.490260 1_2:+57002695 Msa0079230:CDS
TTCGTTTCAGTGGAATGAAA+GGG 0.496231 1_2:-57002348 None:intergenic
CTGGACGGCTACGAACTTCA+AGG 0.496906 1_2:-57002694 None:intergenic
TCGTAGCCGTCCAGGGAAGC+AGG 0.501536 1_2:+57002703 Msa0079230:CDS
TTTGACCAGGTGGTGGAGGA+TGG 0.504276 1_2:+57007457 Msa0079230:intron
TTTCGTTTCAGTGGAATGAA+AGG 0.505172 1_2:-57002349 None:intergenic
GACCCTAGCAAAGAAGTTCA+AGG 0.508316 1_2:+57007017 Msa0079230:CDS
AGCAAAGAAGTTCAAGGTTG+GGG 0.509636 1_2:+57007023 Msa0079230:CDS
GCAGGTTCAGCTGTCGGAGA+CGG 0.516990 1_2:+57002721 Msa0079230:CDS
AATAGATCACAGAACAGAAA+AGG 0.517642 1_2:-57007942 None:intergenic
TCTGAAGCAGCCAAAGCCAT+TGG 0.518464 1_2:+57008142 Msa0079230:three_prime_UTR
TTGGGTGATTATGTGGATCG+AGG 0.524951 1_2:+57006663 Msa0079230:CDS
AACCATTTCTCACATAACTT+CGG 0.526041 1_2:+57008010 Msa0079230:three_prime_UTR
AAGGTTGGGGAATGAATGAC+AGG 0.526085 1_2:+57007036 Msa0079230:CDS
GGAAGGGGATTTCGTTTCAG+TGG 0.531478 1_2:-57002358 None:intergenic
TTTATGATGAGTGTAAAAGA+AGG 0.531875 1_2:+57006802 Msa0079230:CDS
AAAATATTGTTACAAGCTGC+CGG 0.536379 1_2:-57007498 None:intergenic
AAACTCTCCAGCAGGTGTAA+AGG 0.539592 1_2:+57007666 Msa0079230:CDS
TGGGTGATTATGTGGATCGA+GGG 0.542417 1_2:+57006664 Msa0079230:CDS
CAACGCAGAATTTGGAGATA+GGG 0.544307 1_2:+57007898 Msa0079230:three_prime_UTR
TTTCGGCGCCTAATTACTGT+GGG 0.546628 1_2:+57007518 Msa0079230:CDS
TGGGGCATTGAATTTAGCAA+TGG 0.556455 1_2:+57008083 Msa0079230:three_prime_UTR
TTAATTAGGTCACGGAAGGA+AGG 0.566472 1_2:-57002312 None:intergenic
GCACATCAGTCGGCCTCTGT+AGG 0.567167 1_2:-57006959 None:intergenic
AGAGTTTCCTGGTTTAGTAG+TGG 0.569550 1_2:-57007650 None:intergenic
CCTGTATCAGGCACATCAGT+CGG 0.573201 1_2:-57006969 None:intergenic
TCATCAATGAGGGCTGCCAC+AGG 0.577241 1_2:-57006873 None:intergenic
TGATTTAATTAGGTCACGGA+AGG 0.579383 1_2:-57002316 None:intergenic
GTATGGTGGATTACCTCCTC+AGG 0.580103 1_2:+57006626 Msa0079230:CDS
AAACCAGGAAACTCTCCAGC+AGG 0.580760 1_2:+57007658 Msa0079230:CDS
CTAGCAAAGAAGTTCAAGGT+TGG 0.581376 1_2:+57007021 Msa0079230:CDS
CGTTTCAGTGGAATGAAAGG+GGG 0.582060 1_2:-57002346 None:intergenic
TTGAAGTTCGTAGCCGTCCA+GGG 0.585517 1_2:+57002696 Msa0079230:CDS
TGACGATGAAGACAAGGAGG+AGG 0.588349 1_2:-57002484 None:intergenic
AGGGAAGCAGGTTCAGCTGT+CGG 0.588957 1_2:+57002715 Msa0079230:CDS
AACAAGTAGTTGGCCTGAGG+AGG 0.589163 1_2:-57006639 None:intergenic
GCACAAAATCAACCGTGAGT+TGG 0.590217 1_2:+57007725 Msa0079230:three_prime_UTR
TTGCTTCAATTGCCTACCTG+TGG 0.593940 1_2:+57006857 Msa0079230:CDS
TGATTGATTTAATTAGGTCA+CGG 0.603517 1_2:-57002320 None:intergenic
TCGTTTCAGTGGAATGAAAG+GGG 0.605282 1_2:-57002347 None:intergenic
GTTCAATGTAAGGATATGGA+AGG 0.613524 1_2:+57006824 Msa0079230:CDS
CTTTGCTAGGGTCTGACCAG+AGG 0.615007 1_2:-57007007 None:intergenic
TCTCCAGCAGGTGTAAAGGT+AGG 0.616034 1_2:+57007670 Msa0079230:CDS
AAGAAGGCATTGCCAACTCA+CGG 0.618860 1_2:-57007737 None:intergenic
GCTGAACCTGCTTCCCTGGA+CGG 0.632476 1_2:-57002709 None:intergenic
CAATGAGGGCTGCCACAGGT+AGG 0.639222 1_2:-57006869 None:intergenic
TGATTGTGACGATGAAGACA+AGG 0.639663 1_2:-57002490 None:intergenic
AATGGAACAAGCTACATACA+TGG 0.640138 1_2:+57008101 Msa0079230:three_prime_UTR
AGTACGACCACTACTAAACC+AGG 0.640553 1_2:+57007643 Msa0079230:CDS
AAAGTTTAACCTGATGAGCA+CGG 0.643579 1_2:-57007130 None:intergenic
TAGCAGTAGAACATAGCTGA+CGG 0.659481 1_2:-57002748 None:intergenic
GTCGTGCAAGAAAGCATTTG+GGG 0.664855 1_2:+57008065 Msa0079230:three_prime_UTR
TGTGGGGAGTTTGACAACGC+TGG 0.676964 1_2:+57007535 Msa0079230:CDS
TTCGGCGCCTAATTACTGTG+GGG 0.690124 1_2:+57007519 Msa0079230:CDS
CCGTTCCTCTCTCAAAACGA+CGG 0.716575 1_2:+57002455 Msa0079230:five_prime_UTR
AGGTTGGGGAATGAATGACA+GGG 0.722361 1_2:+57007037 Msa0079230:CDS
TTGTGACGATGAAGACAAGG+AGG 0.737270 1_2:-57002487 None:intergenic
GGTTGGGGAATGAATGACAG+GGG 0.740649 1_2:+57007038 Msa0079230:CDS
ATCAGATTAGAAACCTACAG+AGG 0.757889 1_2:+57006946 Msa0079230:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATGATAATAATTGAAATTAA+GGG - chr1_2:57002578-57002597 None:intergenic 10.0%
!! TATGATAATAATTGAAATTA+AGG - chr1_2:57002579-57002598 None:intergenic 10.0%
!!! TTTTTCTTATTGTATTATTT+CGG + chr1_2:57002938-57002957 Msa0079230:intron 10.0%
!! TTTATGAAATAATTATAGAA+TGG + chr1_2:57004386-57004405 Msa0079230:intron 10.0%
!! TTATGAAATAATTATAGAAT+GGG + chr1_2:57004387-57004406 Msa0079230:intron 10.0%
!!! AAGAATTTTAAAAAAAGATA+AGG - chr1_2:57005645-57005664 None:intergenic 10.0%
!!! AATTTTATCATTTCAAATAA+TGG - chr1_2:57005802-57005821 None:intergenic 10.0%
!!! TGATTATAAAATTTTAGTTT+CGG + chr1_2:57006029-57006048 Msa0079230:intron 10.0%
!!! TTTCATATTTTTTTTTTTGA+AGG - chr1_2:57006361-57006380 None:intergenic 10.0%
!! TTCAAAAAAAAAAATATGAA+AGG + chr1_2:57006360-57006379 Msa0079230:intron 10.0%
!! TAGAAAGTAATTATTAAAAT+AGG + chr1_2:57007863-57007882 Msa0079230:three_prime_UTR 10.0%
!! AGAAAGTAATTATTAAAATA+GGG + chr1_2:57007864-57007883 Msa0079230:three_prime_UTR 10.0%
!! TTAAGAACGAAAATTAATTA+TGG + chr1_2:57005602-57005621 Msa0079230:intron 15.0%
!! TAAGAACGAAAATTAATTAT+GGG + chr1_2:57005603-57005622 Msa0079230:intron 15.0%
!!! TCTTTTTGAAATATCTTTTT+CGG + chr1_2:57005700-57005719 Msa0079230:intron 15.0%
!!! GATTATAAAATTTTAGTTTC+GGG + chr1_2:57006030-57006049 Msa0079230:intron 15.0%
!! GATAAAAATAAGTGTAAAAT+AGG + chr1_2:57006311-57006330 Msa0079230:intron 15.0%
!! GAAAGTAATTATTAAAATAG+GGG + chr1_2:57007865-57007884 Msa0079230:three_prime_UTR 15.0%
!! AAATTACCACAAATCTTAAT+AGG - chr1_2:57002818-57002837 None:intergenic 20.0%
!! GTTAGACATATAATAAGTAA+AGG - chr1_2:57004584-57004603 None:intergenic 20.0%
!!! AAAAATCTGTTTTATTAACC+AGG + chr1_2:57004612-57004631 Msa0079230:intron 20.0%
!! TATAAAATAGATTTGATCTG+AGG + chr1_2:57005195-57005214 Msa0079230:intron 20.0%
!!! TTATACTATGTTTTTTGTAG+AGG + chr1_2:57005381-57005400 Msa0079230:intron 20.0%
!!! AATTTGCTAGTAAAATATGT+CGG - chr1_2:57005501-57005520 None:intergenic 20.0%
!! AAGAACGAAAATTAATTATG+GGG + chr1_2:57005604-57005623 Msa0079230:intron 20.0%
!! AACTCAAAATGATATCTAAA+GGG - chr1_2:57005950-57005969 None:intergenic 20.0%
!! AAACTCAAAATGATATCTAA+AGG - chr1_2:57005951-57005970 None:intergenic 20.0%
!! AATAGTAAAAAATAGGCAAT+AGG - chr1_2:57006152-57006171 None:intergenic 20.0%
!! TCTTGTCAATAGTAAAAAAT+AGG - chr1_2:57006159-57006178 None:intergenic 20.0%
!! TGGATTATGTTCATATAAAT+GGG - chr1_2:57006455-57006474 None:intergenic 20.0%
!!! ATGGATTATGTTCATATAAA+TGG - chr1_2:57006456-57006475 None:intergenic 20.0%
!!! TTATTTTATATGCTAAGAGA+AGG - chr1_2:57006713-57006732 None:intergenic 20.0%
!! CATCATAAAATCCATATATA+CGG - chr1_2:57006791-57006810 None:intergenic 20.0%
!!! AAAAAAACAAAGCTCAATTT+TGG + chr1_2:57007619-57007638 Msa0079230:CDS 20.0%
!! TGATTGATTTAATTAGGTCA+CGG - chr1_2:57002323-57002342 None:intergenic 25.0%
!! GGGATTTGATTGATTTAATT+AGG - chr1_2:57002329-57002348 None:intergenic 25.0%
!!! CATTTGTTTTTGTTGATGAA+GGG - chr1_2:57002382-57002401 None:intergenic 25.0%
!!! TCATTTGTTTTTGTTGATGA+AGG - chr1_2:57002383-57002402 None:intergenic 25.0%
!!! TTGTGGTAATTTTTTCAACT+CGG + chr1_2:57002826-57002845 Msa0079230:intron 25.0%
! TCAGATTATAACACATATCA+TGG - chr1_2:57002903-57002922 None:intergenic 25.0%
!! TTATAATCTGACATTTTGCT+TGG + chr1_2:57002912-57002931 Msa0079230:intron 25.0%
! CATACACAATCAATAAATCA+CGG - chr1_2:57002997-57003016 None:intergenic 25.0%
!!! TTTTCAATGAGTTTTGATTG+TGG + chr1_2:57003573-57003592 Msa0079230:intron 25.0%
!!! TTTCAATGAGTTTTGATTGT+GGG + chr1_2:57003574-57003593 Msa0079230:intron 25.0%
! TGAACAAGTCAAATAACATA+GGG - chr1_2:57004022-57004041 None:intergenic 25.0%
! ATGAACAAGTCAAATAACAT+AGG - chr1_2:57004023-57004042 None:intergenic 25.0%
!!! NNNNNNNNNNCACCGATTTG+AGG - chr1_2:57004264-57004283 None:intergenic 25.0%
! TCAGTGTAAAATAATCACAT+AGG - chr1_2:57004447-57004466 None:intergenic 25.0%
! GAACAATGTTATCACTTTAT+AGG + chr1_2:57004484-57004503 Msa0079230:intron 25.0%
!!! AAATCTTTGAGATAAAGTTG+AGG + chr1_2:57004532-57004551 Msa0079230:intron 25.0%
! TATTATATGTCTAACAGTAC+AGG + chr1_2:57004589-57004608 Msa0079230:intron 25.0%
!! TAGAGAATTTTTCCTTGAAA+TGG + chr1_2:57004912-57004931 Msa0079230:intron 25.0%
! GACGATATTAAAGAAGAATT+GGG - chr1_2:57005228-57005247 None:intergenic 25.0%
! AGACGATATTAAAGAAGAAT+TGG - chr1_2:57005229-57005248 None:intergenic 25.0%
! GAAAATTAATTATGGGGTAT+TGG + chr1_2:57005610-57005629 Msa0079230:intron 25.0%
!! TTTGAGTTTAAACTAGCAAA+TGG + chr1_2:57005962-57005981 Msa0079230:intron 25.0%
! TTGAGTTTAAACTAGCAAAT+GGG + chr1_2:57005963-57005982 Msa0079230:intron 25.0%
!! CATTCATAAGTAACTTTTCA+AGG + chr1_2:57005999-57006018 Msa0079230:intron 25.0%
!!! TAAAATTTTAGTTTCGGGAA+TGG + chr1_2:57006035-57006054 Msa0079230:intron 25.0%
!!! TTTGAAGTATTGCTAATAGA+AGG + chr1_2:57006058-57006077 Msa0079230:intron 25.0%
! TGTTCATATAAATGGGTAAA+TGG - chr1_2:57006448-57006467 None:intergenic 25.0%
! AATAACAAGACTTCAATAGA+TGG - chr1_2:57006475-57006494 None:intergenic 25.0%
! TATCATTACCACATCATATT+TGG + chr1_2:57006494-57006513 Msa0079230:intron 25.0%
! TCTTAAATCCAAATATGATG+TGG - chr1_2:57006505-57006524 None:intergenic 25.0%
!!! TATCCTTTTGTTGATTTTTC+AGG + chr1_2:57006561-57006580 Msa0079230:intron 25.0%
!!! CTGAGAATTTTTTTCTTTTG+CGG + chr1_2:57006739-57006758 Msa0079230:CDS 25.0%
!!! TGAGAATTTTTTTCTTTTGC+GGG + chr1_2:57006740-57006759 Msa0079230:CDS 25.0%
! TTTATGATGAGTGTAAAAGA+AGG + chr1_2:57006802-57006821 Msa0079230:CDS 25.0%
!! CAAAATCTTTTCATCAATGA+GGG - chr1_2:57006886-57006905 None:intergenic 25.0%
!! ACAAAATCTTTTCATCAATG+AGG - chr1_2:57006887-57006906 None:intergenic 25.0%
!! ATTTTCATATCACAGAAATG+GGG - chr1_2:57007205-57007224 None:intergenic 25.0%
!! CATTTTCATATCACAGAAAT+GGG - chr1_2:57007206-57007225 None:intergenic 25.0%
!! TCATTTTCATATCACAGAAA+TGG - chr1_2:57007207-57007226 None:intergenic 25.0%
! TATGTGAGAAATGGTTAATA+TGG - chr1_2:57008006-57008025 None:intergenic 25.0%
! TTTACGGAGTCAGAATTTTT+GGG - chr1_2:57002422-57002441 None:intergenic 30.0%
AAAAGCGAAATCATGAAACA+AGG - chr1_2:57002868-57002887 None:intergenic 30.0%
! TCTTTTCTTTTCTCTGTATC+AGG + chr1_2:57003078-57003097 Msa0079230:intron 30.0%
!! TGCTTTGATAATTTGCTAGT+TGG + chr1_2:57003125-57003144 Msa0079230:intron 30.0%
TAAACACTTGTGTTGTAGTA+AGG - chr1_2:57003675-57003694 None:intergenic 30.0%
TGACATAGGAAGTAAGAAAT+AGG - chr1_2:57003752-57003771 None:intergenic 30.0%
GAACAAGTCAAATAACATAG+GGG - chr1_2:57004021-57004040 None:intergenic 30.0%
AGTCTTAAGCACAATTGATA+TGG - chr1_2:57004413-57004432 None:intergenic 30.0%
GCATACAAATTTCAATTTCC+TGG - chr1_2:57004633-57004652 None:intergenic 30.0%
GAAATTTGTATGCTATGATG+TGG + chr1_2:57004640-57004659 Msa0079230:intron 30.0%
ACGTAAAACGCATTTCTAAA+CGG + chr1_2:57004663-57004682 Msa0079230:intron 30.0%
!!! CTCCTTTATCTTTTAAGTTC+CGG + chr1_2:57004718-57004737 Msa0079230:intron 30.0%
AACCGGAACTTAAAAGATAA+AGG - chr1_2:57004723-57004742 None:intergenic 30.0%
ACCAATTTACTGTCACATTT+GGG - chr1_2:57004760-57004779 None:intergenic 30.0%
TACCAATTTACTGTCACATT+TGG - chr1_2:57004761-57004780 None:intergenic 30.0%
!! AGGTTCTGTTTCTGAATATT+GGG + chr1_2:57004801-57004820 Msa0079230:intron 30.0%
ATTTCAAGCATTCCATTTCA+AGG - chr1_2:57004927-57004946 None:intergenic 30.0%
!! TAGTGTTTTGTTGAGATTGA+AGG + chr1_2:57004965-57004984 Msa0079230:intron 30.0%
AACAAATATGACCCATTTCA+AGG - chr1_2:57005017-57005036 None:intergenic 30.0%
! ATGGGTCATATTTGTTAAAC+TGG + chr1_2:57005021-57005040 Msa0079230:intron 30.0%
! TGTCAAAACAATTTTGCTCA+AGG - chr1_2:57005158-57005177 None:intergenic 30.0%
AATGATGGTATTGTTACTCT+TGG + chr1_2:57005296-57005315 Msa0079230:intron 30.0%
! CATGTTTGAAGTTTAAACCT+TGG - chr1_2:57005325-57005344 None:intergenic 30.0%
AGTTGTTAAAAGCCTAACAT+TGG + chr1_2:57005432-57005451 Msa0079230:intron 30.0%
AAGTTATCTCATCCAATGTT+AGG - chr1_2:57005447-57005466 None:intergenic 30.0%
CAAATTAGCAATGACCAAAT+AGG + chr1_2:57005515-57005534 Msa0079230:intron 30.0%
!!! TTACAATTTTAGGGCCAAAA+CGG - chr1_2:57005840-57005859 None:intergenic 30.0%
! GACAACACCTTACAATTTTA+GGG - chr1_2:57005849-57005868 None:intergenic 30.0%
! TGACAACACCTTACAATTTT+AGG - chr1_2:57005850-57005869 None:intergenic 30.0%
AAGCAACCTTTCATATTGTT+GGG - chr1_2:57006338-57006357 None:intergenic 30.0%
GTCAATATTCTGATCTTCTA+AGG + chr1_2:57006595-57006614 Msa0079230:CDS 30.0%
CGCAAAAGAAAAAAATTCTC+AGG - chr1_2:57006741-57006760 None:intergenic 30.0%
!!! GAGAATTTTTTTCTTTTGCG+GGG + chr1_2:57006741-57006760 Msa0079230:CDS 30.0%
GCTTCTATTAACCGTATATA+TGG + chr1_2:57006777-57006796 Msa0079230:CDS 30.0%
GTAAAAGAAGGTTCAATGTA+AGG + chr1_2:57006814-57006833 Msa0079230:CDS 30.0%
TTCTCCTGACTTACATAATT+TGG + chr1_2:57006923-57006942 Msa0079230:CDS 30.0%
TGATCCAAATTATGTAAGTC+AGG - chr1_2:57006930-57006949 None:intergenic 30.0%
!! ATATACATTTGGTGCTGATA+AGG + chr1_2:57007067-57007086 Msa0079230:CDS 30.0%
CATCATAAACAGCTGATAAA+TGG - chr1_2:57007351-57007370 None:intergenic 30.0%
! TGCATAATTATCTTTTGACC+AGG + chr1_2:57007444-57007463 Msa0079230:intron 30.0%
! ATAATTATCTTTTGACCAGG+TGG + chr1_2:57007447-57007466 Msa0079230:intron 30.0%
AAAATATTGTTACAAGCTGC+CGG - chr1_2:57007501-57007520 None:intergenic 30.0%
! GCAGCTTGTAACAATATTTT+CGG + chr1_2:57007501-57007520 Msa0079230:CDS 30.0%
!! TATCAGCTGGCTTTAATATT+TGG - chr1_2:57007600-57007619 None:intergenic 30.0%
!!! AGCTTTGTTTTTTTATCAGC+TGG - chr1_2:57007613-57007632 None:intergenic 30.0%
AGAGAGAAAAAGAATCAAGA+AGG - chr1_2:57007756-57007775 None:intergenic 30.0%
!! TGTATGATGCTTCTAGAATT+TGG + chr1_2:57007833-57007852 Msa0079230:three_prime_UTR 30.0%
AATAGATCACAGAACAGAAA+AGG - chr1_2:57007945-57007964 None:intergenic 30.0%
AACCATTTCTCACATAACTT+CGG + chr1_2:57008010-57008029 Msa0079230:three_prime_UTR 30.0%
! GAAACAATTGATTCATCCAA+TGG - chr1_2:57008161-57008180 None:intergenic 30.0%
TGATTTAATTAGGTCACGGA+AGG - chr1_2:57002319-57002338 None:intergenic 35.0%
TTCGTTTCAGTGGAATGAAA+GGG - chr1_2:57002351-57002370 None:intergenic 35.0%
TTTCGTTTCAGTGGAATGAA+AGG - chr1_2:57002352-57002371 None:intergenic 35.0%
!! TTTTTGTTGATGAAGGGAAG+GGG - chr1_2:57002376-57002395 None:intergenic 35.0%
!! GTTTTTGTTGATGAAGGGAA+GGG - chr1_2:57002377-57002396 None:intergenic 35.0%
!! TGTTTTTGTTGATGAAGGGA+AGG - chr1_2:57002378-57002397 None:intergenic 35.0%
!! ATTTTTGGGCATTCGTTTAG+AGG - chr1_2:57002408-57002427 None:intergenic 35.0%
! GTTTACGGAGTCAGAATTTT+TGG - chr1_2:57002423-57002442 None:intergenic 35.0%
GGTATAAAATCGAAGAAGAG+TGG - chr1_2:57002557-57002576 None:intergenic 35.0%
! TTGTTTGTGTTTTGCAGAGA+TGG + chr1_2:57002637-57002656 Msa0079230:intron 35.0%
CTTGCAGCAACCTAATTTAT+TGG + chr1_2:57002781-57002800 Msa0079230:CDS 35.0%
GCTTCAAGCTCCAATAAATT+AGG - chr1_2:57002794-57002813 None:intergenic 35.0%
! GAAGCACCTATTAAGATTTG+TGG + chr1_2:57002809-57002828 Msa0079230:CDS 35.0%
TAAACCTCAGTTGTCAATAG+CGG + chr1_2:57003303-57003322 Msa0079230:intron 35.0%
ACAACACAAGTGTTTATCGA+TGG + chr1_2:57003679-57003698 Msa0079230:intron 35.0%
! CAACCATGAAAAATCGGTTT+AGG - chr1_2:57003724-57003743 None:intergenic 35.0%
!! CTAAACCGATTTTTCATGGT+TGG + chr1_2:57003722-57003741 Msa0079230:intron 35.0%
GCTTTCCAACCATGAAAAAT+CGG - chr1_2:57003730-57003749 None:intergenic 35.0%
TCTTACTTCCTATGTCAAGT+AGG + chr1_2:57003755-57003774 Msa0079230:intron 35.0%
TCATCTCCATATTCTTGGAA+AGG - chr1_2:57003937-57003956 None:intergenic 35.0%
TTCTCTCATCTCCATATTCT+TGG - chr1_2:57003942-57003961 None:intergenic 35.0%
GAATATGGAGATGAGAGAAA+TGG + chr1_2:57003943-57003962 Msa0079230:intron 35.0%
AGGAAGGATCAAATTCTGTA+AGG + chr1_2:57003966-57003985 Msa0079230:intron 35.0%
CATAGGGGAGTTATTCTAAA+CGG - chr1_2:57004006-57004025 None:intergenic 35.0%
TGCAAAGCTAAAATCTGTGT+TGG - chr1_2:57004132-57004151 None:intergenic 35.0%
GAAGGTTACTATCAGAGAAA+AGG - chr1_2:57004231-57004250 None:intergenic 35.0%
! ATTTGAGGCACAAAGATTGA+AGG - chr1_2:57004249-57004268 None:intergenic 35.0%
TCAATCTTTGTGCCTCAAAT+CGG + chr1_2:57004249-57004268 Msa0079230:intron 35.0%
TAAGTAAAGGTTTGCAATGC+TGG - chr1_2:57004571-57004590 None:intergenic 35.0%
CGTAAAACGCATTTCTAAAC+GGG + chr1_2:57004664-57004683 Msa0079230:intron 35.0%
ATGTGACAGTAAATTGGTAC+AGG + chr1_2:57004762-57004781 Msa0079230:intron 35.0%
!! GAGGTTCTGTTTCTGAATAT+TGG + chr1_2:57004800-57004819 Msa0079230:intron 35.0%
CAAGAGAAGTTGTGTGAAAT+TGG + chr1_2:57004885-57004904 Msa0079230:intron 35.0%
! TGTTTCAAGTGTCCTTGAAA+TGG + chr1_2:57005002-57005021 Msa0079230:intron 35.0%
! GTTTCAAGTGTCCTTGAAAT+GGG + chr1_2:57005003-57005022 Msa0079230:intron 35.0%
TGAACAACTGGGAAAAATGA+TGG + chr1_2:57005281-57005300 Msa0079230:intron 35.0%
ATTGTTACTCTTGGATTCCA+AGG + chr1_2:57005305-57005324 Msa0079230:intron 35.0%
TAGTAAAATATGTCGGCAGA+TGG - chr1_2:57005494-57005513 None:intergenic 35.0%
AGTTTCACTATACGCCTATT+TGG - chr1_2:57005532-57005551 None:intergenic 35.0%
! CATCTAGACTGATTCAACTT+TGG - chr1_2:57005569-57005588 None:intergenic 35.0%
CAAAGTTGAATCAGTCTAGA+TGG + chr1_2:57005567-57005586 Msa0079230:intron 35.0%
AACAAAGTTGAGTGATGACT+TGG + chr1_2:57005729-57005748 Msa0079230:intron 35.0%
!! GTTTTGGCCCTAAAATTGTA+AGG + chr1_2:57005839-57005858 Msa0079230:intron 35.0%
AGTTTAAACTAGCAAATGGG+AGG + chr1_2:57005966-57005985 Msa0079230:intron 35.0%
GTTTAAACTAGCAAATGGGA+GGG + chr1_2:57005967-57005986 Msa0079230:intron 35.0%
GTTAGTAACACTCGGATAAA+AGG - chr1_2:57006087-57006106 None:intergenic 35.0%
! TCAAATCTGAAACTTGCTCA+AGG + chr1_2:57006180-57006199 Msa0079230:intron 35.0%
! CAAATCTGAAACTTGCTCAA+GGG + chr1_2:57006181-57006200 Msa0079230:intron 35.0%
! AAATCTGAAACTTGCTCAAG+GGG + chr1_2:57006182-57006201 Msa0079230:intron 35.0%
ATAGGACCCAACAATATGAA+AGG + chr1_2:57006329-57006348 Msa0079230:intron 35.0%
GAAGCAACCTTTCATATTGT+TGG - chr1_2:57006339-57006358 None:intergenic 35.0%
ATCTGATATATCCTTGTGCA+CGG + chr1_2:57006391-57006410 Msa0079230:intron 35.0%
TCGCCTGAAAAATCAACAAA+AGG - chr1_2:57006567-57006586 None:intergenic 35.0%
!!! CTTCTAAGGCTTTTTGAGTA+TGG + chr1_2:57006609-57006628 Msa0079230:CDS 35.0%
ATCACCCAAAAACAAGTAGT+TGG - chr1_2:57006652-57006671 None:intergenic 35.0%
!!! CTTGTTTTTGGGTGATTATG+TGG + chr1_2:57006656-57006675 Msa0079230:CDS 35.0%
! GGTTAATAGAAGCACATTCA+TGG - chr1_2:57006770-57006789 None:intergenic 35.0%
GAAGGTTCAATGTAAGGATA+TGG + chr1_2:57006820-57006839 Msa0079230:CDS 35.0%
GTTCAATGTAAGGATATGGA+AGG + chr1_2:57006824-57006843 Msa0079230:CDS 35.0%
! GAAAAGATTTTGTGCATGCA+TGG + chr1_2:57006894-57006913 Msa0079230:CDS 35.0%
ATCAGATTAGAAACCTACAG+AGG + chr1_2:57006946-57006965 Msa0079230:CDS 35.0%
AACCTTGAACTTCTTTGCTA+GGG - chr1_2:57007022-57007041 None:intergenic 35.0%
TAGCAAAGAAGTTCAAGGTT+GGG + chr1_2:57007022-57007041 Msa0079230:CDS 35.0%
! GTTTCTTCAGAAGCATGATT+TGG + chr1_2:57007097-57007116 Msa0079230:CDS 35.0%
AAAGTTTAACCTGATGAGCA+CGG - chr1_2:57007133-57007152 None:intergenic 35.0%
! TCAGGTTAAACTTTTGCCTT+TGG + chr1_2:57007139-57007158 Msa0079230:intron 35.0%
AGCAACATATTGAGAACCAA+AGG - chr1_2:57007158-57007177 None:intergenic 35.0%
!! TTTGGTTCTCAATATGTTGC+TGG + chr1_2:57007157-57007176 Msa0079230:intron 35.0%
! TTGGTTCTCAATATGTTGCT+GGG + chr1_2:57007158-57007177 Msa0079230:intron 35.0%
CAATCCTAATCTTTCTCTCA+GGG + chr1_2:57007240-57007259 Msa0079230:intron 35.0%
! AGCTGATAAATGGACTTGAA+CGG - chr1_2:57007341-57007360 None:intergenic 35.0%
GATATGAGTTCTTTGCTAAC+CGG + chr1_2:57007479-57007498 Msa0079230:CDS 35.0%
! TGATTCTTTTTCTCTCTGTC+TGG + chr1_2:57007759-57007778 Msa0079230:three_prime_UTR 35.0%
TATCACAACAACGCAGAATT+TGG + chr1_2:57007890-57007909 Msa0079230:three_prime_UTR 35.0%
ATCCGAAGTTATGTGAGAAA+TGG - chr1_2:57008015-57008034 None:intergenic 35.0%
CTCACATAACTTCGGATTAT+TGG + chr1_2:57008018-57008037 Msa0079230:three_prime_UTR 35.0%
AATGGAACAAGCTACATACA+TGG + chr1_2:57008101-57008120 Msa0079230:three_prime_UTR 35.0%
! ATTGATTCATCCAATGGCTT+TGG - chr1_2:57008155-57008174 None:intergenic 35.0%
TTAATTAGGTCACGGAAGGA+AGG - chr1_2:57002315-57002334 None:intergenic 40.0%
TCGTTTCAGTGGAATGAAAG+GGG - chr1_2:57002350-57002369 None:intergenic 40.0%
TGATTGTGACGATGAAGACA+AGG - chr1_2:57002493-57002512 None:intergenic 40.0%
! AGAGATGGAACAAGCAGTTT+TGG + chr1_2:57002652-57002671 Msa0079230:intron 40.0%
TAGCAGTAGAACATAGCTGA+CGG - chr1_2:57002751-57002770 None:intergenic 40.0%
ATAAATCACGGACTCTGACA+CGG - chr1_2:57002985-57003004 None:intergenic 40.0%
CAAACCTCTGATGTCAATAG+TGG + chr1_2:57003168-57003187 Msa0079230:intron 40.0%
ATCACGGGGATAAACATGTT+GGG + chr1_2:57003399-57003418 Msa0079230:intron 40.0%
! CATGAAAAATCGGTTTAGGC+GGG - chr1_2:57003720-57003739 None:intergenic 40.0%
! CCATGAAAAATCGGTTTAGG+CGG - chr1_2:57003721-57003740 None:intergenic 40.0%
TACTTCCTATGTCAAGTAGG+TGG + chr1_2:57003758-57003777 Msa0079230:intron 40.0%
GCTTCTACAATGAACAAGCT+GGG + chr1_2:57003780-57003799 Msa0079230:intron 40.0%
! GATGTCAGAGTGGATTCATT+CGG - chr1_2:57003811-57003830 None:intergenic 40.0%
!! AAAGGAGGAAGCTCTAAAGA+CGG - chr1_2:57003919-57003938 None:intergenic 40.0%
CTTCCTCCTTTCCAAGAATA+TGG + chr1_2:57003928-57003947 Msa0079230:intron 40.0%
TCTCCATATTCTTGGAAAGG+AGG - chr1_2:57003934-57003953 None:intergenic 40.0%
TATGGAGATGAGAGAAATGG+AGG + chr1_2:57003946-57003965 Msa0079230:intron 40.0%
GTTAAAATGAGGGAAGGTCA+TGG - chr1_2:57004059-57004078 None:intergenic 40.0%
CTGAGGGGTAGTTAAAATGA+GGG - chr1_2:57004069-57004088 None:intergenic 40.0%
TAAGACAGCAACACCAACAT+GGG - chr1_2:57004164-57004183 None:intergenic 40.0%
ACTATCAGAGAAAAGGTGAG+AGG - chr1_2:57004224-57004243 None:intergenic 40.0%
TTTACACTGAAATGCAACGC+AGG + chr1_2:57004457-57004476 Msa0079230:intron 40.0%
GCCCAAATGTGACAGTAAAT+TGG + chr1_2:57004756-57004775 Msa0079230:intron 40.0%
! AGCGTAGACTGTTTGTTTCT+AGG + chr1_2:57004827-57004846 Msa0079230:intron 40.0%
AATGCATCCTTCTGCATCTA+TGG + chr1_2:57005346-57005365 Msa0079230:intron 40.0%
TAGTTGACCATAGATGCAGA+AGG - chr1_2:57005356-57005375 None:intergenic 40.0%
TTCTGCATCTATGGTCAACT+AGG + chr1_2:57005355-57005374 Msa0079230:intron 40.0%
ACCTGGGTGAACCTATTTAA+AGG + chr1_2:57006115-57006134 Msa0079230:intron 40.0%
CCTGGGTGAACCTATTTAAA+GGG + chr1_2:57006116-57006135 Msa0079230:intron 40.0%
AGAGAGCTGTCCCTTTAAAT+AGG - chr1_2:57006129-57006148 None:intergenic 40.0%
! TGGTCTTGATCATAGTGACA+AGG - chr1_2:57006217-57006236 None:intergenic 40.0%
GTCACTATGATCAAGACCAA+CGG + chr1_2:57006218-57006237 Msa0079230:intron 40.0%
TCACTATGATCAAGACCAAC+GGG + chr1_2:57006219-57006238 Msa0079230:intron 40.0%
!!! GATTTTTCAGGCGACATACA+TGG + chr1_2:57006573-57006592 Msa0079230:intron 40.0%
!!! CTAAGGCTTTTTGAGTATGG+TGG + chr1_2:57006612-57006631 Msa0079230:CDS 40.0%
! AAAAACAAGTAGTTGGCCTG+AGG - chr1_2:57006645-57006664 None:intergenic 40.0%
!! TCAGGCCAACTACTTGTTTT+TGG + chr1_2:57006644-57006663 Msa0079230:CDS 40.0%
!! CAGGCCAACTACTTGTTTTT+GGG + chr1_2:57006645-57006664 Msa0079230:CDS 40.0%
! AAGATTTTGTGCATGCATGG+CGG + chr1_2:57006897-57006916 Msa0079230:CDS 40.0%
CAACCTTGAACTTCTTTGCT+AGG - chr1_2:57007023-57007042 None:intergenic 40.0%
CTAGCAAAGAAGTTCAAGGT+TGG + chr1_2:57007021-57007040 Msa0079230:CDS 40.0%
AGCAAAGAAGTTCAAGGTTG+GGG + chr1_2:57007023-57007042 Msa0079230:CDS 40.0%
!! AGGGGAGTGTCATATACATT+TGG + chr1_2:57007056-57007075 Msa0079230:CDS 40.0%
GCAATCCTAATCTTTCTCTC+AGG + chr1_2:57007239-57007258 Msa0079230:intron 40.0%
ATGACCCTGAGAGAAAGATT+AGG - chr1_2:57007247-57007266 None:intergenic 40.0%
TGACACACATTTATGCACTG+AGG + chr1_2:57007305-57007324 Msa0079230:intron 40.0%
CAATTCTTCGATCGCAATAC+AGG - chr1_2:57007390-57007409 None:intergenic 40.0%
! ATTATCTTTTGACCAGGTGG+TGG + chr1_2:57007450-57007469 Msa0079230:intron 40.0%
TCAAACTCCCCACAGTAATT+AGG - chr1_2:57007529-57007548 None:intergenic 40.0%
AGAGTTTCCTGGTTTAGTAG+TGG - chr1_2:57007653-57007672 None:intergenic 40.0%
ACAACGCAGAATTTGGAGAT+AGG + chr1_2:57007897-57007916 Msa0079230:three_prime_UTR 40.0%
CAACGCAGAATTTGGAGATA+GGG + chr1_2:57007898-57007917 Msa0079230:three_prime_UTR 40.0%
!! TAGTCGTGCAAGAAAGCATT+TGG + chr1_2:57008063-57008082 Msa0079230:three_prime_UTR 40.0%
!! AGTCGTGCAAGAAAGCATTT+GGG + chr1_2:57008064-57008083 Msa0079230:three_prime_UTR 40.0%
!! TGGGGCATTGAATTTAGCAA+TGG + chr1_2:57008083-57008102 Msa0079230:three_prime_UTR 40.0%
CGTTTCAGTGGAATGAAAGG+GGG - chr1_2:57002349-57002368 None:intergenic 45.0%
!! CGGTGTCGTTTAGAGGTTTA+CGG - chr1_2:57002438-57002457 None:intergenic 45.0%
!!! AAACACCGTCGTTTTGAGAG+AGG - chr1_2:57002463-57002482 None:intergenic 45.0%
TTGTGACGATGAAGACAAGG+AGG - chr1_2:57002490-57002509 None:intergenic 45.0%
CGAAGAAGAGTGGAAGAAGT+GGG - chr1_2:57002547-57002566 None:intergenic 45.0%
TCGAAGAAGAGTGGAAGAAG+TGG - chr1_2:57002548-57002567 None:intergenic 45.0%
ACAGCCACTATTGACATCAG+AGG - chr1_2:57003175-57003194 None:intergenic 45.0%
ATGTCAATAGTGGCTGTGAG+CGG + chr1_2:57003178-57003197 Msa0079230:intron 45.0%
ATCACGGGGAGAAATGCATT+GGG + chr1_2:57003264-57003283 Msa0079230:intron 45.0%
GAGAAATGCATTGGGTTTCG+TGG + chr1_2:57003272-57003291 Msa0079230:intron 45.0%
CAACATGTTTATCCCCGTGA+TGG - chr1_2:57003400-57003419 None:intergenic 45.0%
CATCACGGGGATAAACATGT+TGG + chr1_2:57003398-57003417 Msa0079230:intron 45.0%
GGATAAACATGTTGGGTTCG+TGG + chr1_2:57003406-57003425 Msa0079230:intron 45.0%
TAAACATGTTGGGTTCGTGG+TGG + chr1_2:57003409-57003428 Msa0079230:intron 45.0%
ACAAGTGTTTATCGATGGCC+AGG + chr1_2:57003684-57003703 Msa0079230:intron 45.0%
!! CCGCCTAAACCGATTTTTCA+TGG + chr1_2:57003718-57003737 Msa0079230:intron 45.0%
AGAAGCCACCTACTTGACAT+AGG - chr1_2:57003766-57003785 None:intergenic 45.0%
GGCTTCTACAATGAACAAGC+TGG + chr1_2:57003779-57003798 Msa0079230:intron 45.0%
!! TAGTGGTTCTGATGTCAGAG+TGG - chr1_2:57003821-57003840 None:intergenic 45.0%
TGCTGAAGTGAAATAGCCGA+GGG - chr1_2:57003865-57003884 None:intergenic 45.0%
! CTAAAGACGGGGATTAGTGA+GGG - chr1_2:57003906-57003925 None:intergenic 45.0%
! TCTAAAGACGGGGATTAGTG+AGG - chr1_2:57003907-57003926 None:intergenic 45.0%
!! AAGGAGGAAGCTCTAAAGAC+GGG - chr1_2:57003918-57003937 None:intergenic 45.0%
GAGATGAGAGAAATGGAGGA+AGG + chr1_2:57003950-57003969 Msa0079230:intron 45.0%
GGGGTAGTTAAAATGAGGGA+AGG - chr1_2:57004065-57004084 None:intergenic 45.0%
GCTGAGGGGTAGTTAAAATG+AGG - chr1_2:57004070-57004089 None:intergenic 45.0%
TGCAGTGATTAAGCCCATGT+TGG + chr1_2:57004148-57004167 Msa0079230:intron 45.0%
CTAAGACAGCAACACCAACA+TGG - chr1_2:57004165-57004184 None:intergenic 45.0%
TCAACATGAGCTTGCGGTTT+GGG - chr1_2:57004197-57004216 None:intergenic 45.0%
ATCAACATGAGCTTGCGGTT+TGG - chr1_2:57004198-57004217 None:intergenic 45.0%
GGAACATCAACATGAGCTTG+CGG - chr1_2:57004203-57004222 None:intergenic 45.0%
AAATTGGTACAGGCCCTGTA+TGG + chr1_2:57004772-57004791 Msa0079230:intron 45.0%
AGAACCTCCATGTCCATACA+GGG - chr1_2:57004788-57004807 None:intergenic 45.0%
ATGCTTTAGCCAGTTAAGCC+AGG + chr1_2:57005250-57005269 Msa0079230:intron 45.0%
TGCTTTAGCCAGTTAAGCCA+GGG + chr1_2:57005251-57005270 Msa0079230:intron 45.0%
! AGGGTTGGCATTGAACAACT+GGG + chr1_2:57005270-57005289 Msa0079230:intron 45.0%
!! GAGTGATGACTTGGTGATTG+AGG + chr1_2:57005738-57005757 Msa0079230:intron 45.0%
! TAACGAGTGAAGCTCCGTTT+TGG + chr1_2:57005823-57005842 Msa0079230:intron 45.0%
CGACTCAGGTTAGTAACACT+CGG - chr1_2:57006095-57006114 None:intergenic 45.0%
TTACTAACCTGAGTCGACCT+GGG + chr1_2:57006099-57006118 Msa0079230:intron 45.0%
CCCTTTAAATAGGTTCACCC+AGG - chr1_2:57006119-57006138 None:intergenic 45.0%
! ATGATCAAGACCAACGGGTT+TGG + chr1_2:57006224-57006243 Msa0079230:intron 45.0%
ATACTCTTCACCAAACCCGT+TGG - chr1_2:57006237-57006256 None:intergenic 45.0%
TTGGGTGATTATGTGGATCG+AGG + chr1_2:57006663-57006682 Msa0079230:CDS 45.0%
TGGGTGATTATGTGGATCGA+GGG + chr1_2:57006664-57006683 Msa0079230:CDS 45.0%
TTGCTTCAATTGCCTACCTG+TGG + chr1_2:57006857-57006876 Msa0079230:CDS 45.0%
TCGCAAAGCAAACCTGTATC+AGG - chr1_2:57006984-57007003 None:intergenic 45.0%
GACCCTAGCAAAGAAGTTCA+AGG + chr1_2:57007017-57007036 Msa0079230:CDS 45.0%
AAGGTTGGGGAATGAATGAC+AGG + chr1_2:57007036-57007055 Msa0079230:CDS 45.0%
AGGTTGGGGAATGAATGACA+GGG + chr1_2:57007037-57007056 Msa0079230:CDS 45.0%
! TCTTATTTGCCGTGCTCATC+AGG + chr1_2:57007121-57007140 Msa0079230:CDS 45.0%
! TTTTCGGCGCCTAATTACTG+TGG + chr1_2:57007517-57007536 Msa0079230:CDS 45.0%
TTTCGGCGCCTAATTACTGT+GGG + chr1_2:57007518-57007537 Msa0079230:CDS 45.0%
AGTACGACCACTACTAAACC+AGG + chr1_2:57007643-57007662 Msa0079230:CDS 45.0%
AAACTCTCCAGCAGGTGTAA+AGG + chr1_2:57007666-57007685 Msa0079230:CDS 45.0%
GCACAAAATCAACCGTGAGT+TGG + chr1_2:57007725-57007744 Msa0079230:three_prime_UTR 45.0%
!! AAGAAGGCATTGCCAACTCA+CGG - chr1_2:57007740-57007759 None:intergenic 45.0%
! CTTTTTCTCTCTGTCTGGCT+TGG + chr1_2:57007764-57007783 Msa0079230:three_prime_UTR 45.0%
!! GTCGTGCAAGAAAGCATTTG+GGG + chr1_2:57008065-57008084 Msa0079230:three_prime_UTR 45.0%
GGAAGGGGATTTCGTTTCAG+TGG - chr1_2:57002361-57002380 None:intergenic 50.0%
!! AGAGGAACGGTGTCGTTTAG+AGG - chr1_2:57002445-57002464 None:intergenic 50.0%
!!! CCGTCGTTTTGAGAGAGGAA+CGG - chr1_2:57002458-57002477 None:intergenic 50.0%
CCGTTCCTCTCTCAAAACGA+CGG + chr1_2:57002455-57002474 Msa0079230:five_prime_UTR 50.0%
TGACGATGAAGACAAGGAGG+AGG - chr1_2:57002487-57002506 None:intergenic 50.0%
TTGAAGTTCGTAGCCGTCCA+GGG + chr1_2:57002696-57002715 Msa0079230:CDS 50.0%
TTCGGTAATCCGTGCTTGTC+TGG + chr1_2:57002956-57002975 Msa0079230:intron 50.0%
CAATGCATTTCTCCCCGTGA+TGG - chr1_2:57003265-57003284 None:intergenic 50.0%
CATCACGGGGAGAAATGCAT+TGG + chr1_2:57003263-57003282 Msa0079230:intron 50.0%
ACAGCCGCTATTGACAACTG+AGG - chr1_2:57003310-57003329 None:intergenic 50.0%
TTGTCAATAGCGGCTGTGAG+CGG + chr1_2:57003313-57003332 Msa0079230:intron 50.0%
CTACAGACGCTATACCCATC+CGG - chr1_2:57003371-57003390 None:intergenic 50.0%
GATGGGTATAGCGTCTGTAG+CGG + chr1_2:57003371-57003390 Msa0079230:intron 50.0%
CATGTTTATCCCCGTGATGG+TGG - chr1_2:57003397-57003416 None:intergenic 50.0%
CGTGTATCAGCCCTGCTTTA+GGG - chr1_2:57003458-57003477 None:intergenic 50.0%
TCGTGTATCAGCCCTGCTTT+AGG - chr1_2:57003459-57003478 None:intergenic 50.0%
TAGGCGGGAAGATATTGTCC+TGG - chr1_2:57003705-57003724 None:intergenic 50.0%
TGAAGTGAAATAGCCGAGGG+AGG - chr1_2:57003862-57003881 None:intergenic 50.0%
CTGCTGAAGTGAAATAGCCG+AGG - chr1_2:57003866-57003885 None:intergenic 50.0%
!! AGGAGGAAGCTCTAAAGACG+GGG - chr1_2:57003917-57003936 None:intergenic 50.0%
ATGAGGGAAGGTCATGGAAG+AGG - chr1_2:57004053-57004072 None:intergenic 50.0%
!! TCTGCAGTCTAGAGTGCTGA+GGG - chr1_2:57004085-57004104 None:intergenic 50.0%
! GTTCCGGTTTTCTACCTCAC+AGG + chr1_2:57004734-57004753 Msa0079230:intron 50.0%
CAGAACCTCCATGTCCATAC+AGG - chr1_2:57004789-57004808 None:intergenic 50.0%
TTAGCCAGTTAAGCCAGGGT+TGG + chr1_2:57005255-57005274 Msa0079230:intron 50.0%
AATGCCAACCCTGGCTTAAC+TGG - chr1_2:57005262-57005281 None:intergenic 50.0%
CAGTTGTTCAATGCCAACCC+TGG - chr1_2:57005271-57005290 None:intergenic 50.0%
! CAGGGTTGGCATTGAACAAC+TGG + chr1_2:57005269-57005288 Msa0079230:intron 50.0%
! ATGTCGGCAGATGGCATTGA+AGG - chr1_2:57005485-57005504 None:intergenic 50.0%
GTTACTAACCTGAGTCGACC+TGG + chr1_2:57006098-57006117 Msa0079230:intron 50.0%
CCAAAACAATGCCGTGCACA+AGG - chr1_2:57006405-57006424 None:intergenic 50.0%
! CCTTGTGCACGGCATTGTTT+TGG + chr1_2:57006402-57006421 Msa0079230:intron 50.0%
!! GTATGGTGGATTACCTCCTC+AGG + chr1_2:57006626-57006645 Msa0079230:CDS 50.0%
! AACAAGTAGTTGGCCTGAGG+AGG - chr1_2:57006642-57006661 None:intergenic 50.0%
CCTGTATCAGGCACATCAGT+CGG - chr1_2:57006972-57006991 None:intergenic 50.0%
GTTTGCTTTGCGATCTCCTC+TGG + chr1_2:57006991-57007010 Msa0079230:CDS 50.0%
GGTTGGGGAATGAATGACAG+GGG + chr1_2:57007038-57007057 Msa0079230:CDS 50.0%
!! ATCTTTTGACCAGGTGGTGG+AGG + chr1_2:57007453-57007472 Msa0079230:intron 50.0%
TTCGGCGCCTAATTACTGTG+GGG + chr1_2:57007519-57007538 Msa0079230:CDS 50.0%
AAACCAGGAAACTCTCCAGC+AGG + chr1_2:57007658-57007677 Msa0079230:CDS 50.0%
TCTCCAGCAGGTGTAAAGGT+AGG + chr1_2:57007670-57007689 Msa0079230:CDS 50.0%
CTTCCTACCTTTACACCTGC+TGG - chr1_2:57007676-57007695 None:intergenic 50.0%
! TCTGAAGCAGCCAAAGCCAT+TGG + chr1_2:57008142-57008161 Msa0079230:three_prime_UTR 50.0%
CTGGACGGCTACGAACTTCA+AGG - chr1_2:57002697-57002716 None:intergenic 55.0%
CTTGAAGTTCGTAGCCGTCC+AGG + chr1_2:57002695-57002714 Msa0079230:CDS 55.0%
AGGGAAGCAGGTTCAGCTGT+CGG + chr1_2:57002715-57002734 Msa0079230:CDS 55.0%
ACACGGACACCAGACAAGCA+CGG - chr1_2:57002968-57002987 None:intergenic 55.0%
GTACACTCCAATGCGTCTGG+GGG - chr1_2:57003214-57003233 None:intergenic 55.0%
GGTACACTCCAATGCGTCTG+GGG - chr1_2:57003215-57003234 None:intergenic 55.0%
CGGTACACTCCAATGCGTCT+GGG - chr1_2:57003216-57003235 None:intergenic 55.0%
CCAGACGCATTGGAGTGTAC+CGG + chr1_2:57003214-57003233 Msa0079230:intron 55.0%
ACGCATTGGAGTGTACCGGA+CGG + chr1_2:57003218-57003237 Msa0079230:intron 55.0%
CTACAGACGCTATACCCGTC+CGG - chr1_2:57003236-57003255 None:intergenic 55.0%
GACGGGTATAGCGTCTGTAG+CGG + chr1_2:57003236-57003255 Msa0079230:intron 55.0%
TGCATTTCTCCCCGTGATGG+TGG - chr1_2:57003262-57003281 None:intergenic 55.0%
ACATGTTGGGTTCGTGGTGG+AGG + chr1_2:57003412-57003431 Msa0079230:intron 55.0%
!! CAGCCCTGCTTTAGGGTTTG+CGG - chr1_2:57003451-57003470 None:intergenic 55.0%
GTGAAATAGCCGAGGGAGGA+GGG - chr1_2:57003858-57003877 None:intergenic 55.0%
AGTGAAATAGCCGAGGGAGG+AGG - chr1_2:57003859-57003878 None:intergenic 55.0%
! ACGGGGATTAGTGAGGGAGA+CGG - chr1_2:57003900-57003919 None:intergenic 55.0%
!! CTGCAGTCTAGAGTGCTGAG+GGG - chr1_2:57004084-57004103 None:intergenic 55.0%
!! CTCTGCAGTCTAGAGTGCTG+AGG - chr1_2:57004086-57004105 None:intergenic 55.0%
TAGACTGCAGAGCCAAGCCA+TGG + chr1_2:57004094-57004113 Msa0079230:intron 55.0%
CGTTGACAACCTCCATGGCT+TGG - chr1_2:57004109-57004128 None:intergenic 55.0%
!! GTTGGCGTTGACAACCTCCA+TGG - chr1_2:57004114-57004133 None:intergenic 55.0%
GGGCCTGTGAGGTAGAAAAC+CGG - chr1_2:57004740-57004759 None:intergenic 55.0%
CTGTCACATTTGGGCCTGTG+AGG - chr1_2:57004751-57004770 None:intergenic 55.0%
GTACAGGCCCTGTATGGACA+TGG + chr1_2:57004778-57004797 Msa0079230:intron 55.0%
TCATCAATGAGGGCTGCCAC+AGG - chr1_2:57006876-57006895 None:intergenic 55.0%
CCGACTGATGTGCCTGATAC+AGG + chr1_2:57006969-57006988 Msa0079230:CDS 55.0%
CTTTGCTAGGGTCTGACCAG+AGG - chr1_2:57007010-57007029 None:intergenic 55.0%
!! TTTGACCAGGTGGTGGAGGA+TGG + chr1_2:57007457-57007476 Msa0079230:intron 55.0%
CATATCCATCCTCCACCACC+TGG - chr1_2:57007465-57007484 None:intergenic 55.0%
TGTGGGGAGTTTGACAACGC+TGG + chr1_2:57007535-57007554 Msa0079230:CDS 55.0%
ACACCTGCTGGAGAGTTTCC+TGG - chr1_2:57007664-57007683 None:intergenic 55.0%
GCTGAACCTGCTTCCCTGGA+CGG - chr1_2:57002712-57002731 None:intergenic 60.0%
GACAGCTGAACCTGCTTCCC+TGG - chr1_2:57002716-57002735 None:intergenic 60.0%
GCAGGTTCAGCTGTCGGAGA+CGG + chr1_2:57002721-57002740 Msa0079230:CDS 60.0%
CCGGTACACTCCAATGCGTC+TGG - chr1_2:57003217-57003236 None:intergenic 60.0%
CGCATTGGAGTGTACCGGAC+GGG + chr1_2:57003219-57003238 Msa0079230:intron 60.0%
GTCTGTAGCGGCCACCATCA+CGG + chr1_2:57003248-57003267 Msa0079230:intron 60.0%
TCTGTAGCGGCCACCATCAC+GGG + chr1_2:57003249-57003268 Msa0079230:intron 60.0%
TCAATAGCGGCTGTGAGCGG+TGG + chr1_2:57003316-57003335 Msa0079230:intron 60.0%
GTACACTCCAACGCGTCTGG+GGG - chr1_2:57003349-57003368 None:intergenic 60.0%
GGTACACTCCAACGCGTCTG+GGG - chr1_2:57003350-57003369 None:intergenic 60.0%
CGGTACACTCCAACGCGTCT+GGG - chr1_2:57003351-57003370 None:intergenic 60.0%
CCAGACGCGTTGGAGTGTAC+CGG + chr1_2:57003349-57003368 Msa0079230:intron 60.0%
ACGCGTTGGAGTGTACCGGA+TGG + chr1_2:57003353-57003372 Msa0079230:intron 60.0%
CGCGTTGGAGTGTACCGGAT+GGG + chr1_2:57003354-57003373 Msa0079230:intron 60.0%
GTCTGTAGCGGCCACCATCA+CGG + chr1_2:57003248-57003267 Msa0079230:intron 60.0%
TCTGTAGCGGCCACCATCAC+GGG + chr1_2:57003249-57003268 Msa0079230:intron 60.0%
! TGTTGGGTTCGTGGTGGAGG+CGG + chr1_2:57003415-57003434 Msa0079230:intron 60.0%
CGGCCGCAAACCCTAAAGCA+GGG + chr1_2:57003445-57003464 Msa0079230:intron 60.0%
! GGGTGTCACAGCAGCAGTAG+TGG - chr1_2:57003838-57003857 None:intergenic 60.0%
AGTGAGGGAGACGGAGGTGA+AGG - chr1_2:57003891-57003910 None:intergenic 60.0%
! GGGATTAGTGAGGGAGACGG+AGG - chr1_2:57003897-57003916 None:intergenic 60.0%
ACTGCAGAGCCAAGCCATGG+AGG + chr1_2:57004097-57004116 Msa0079230:intron 60.0%
CAGGCCCTGTATGGACATGG+AGG + chr1_2:57004781-57004800 Msa0079230:intron 60.0%
! AGGTTCACCCAGGTCGACTC+AGG - chr1_2:57006109-57006128 None:intergenic 60.0%
CAATGAGGGCTGCCACAGGT+AGG - chr1_2:57006872-57006891 None:intergenic 60.0%
GCACATCAGTCGGCCTCTGT+AGG - chr1_2:57006962-57006981 None:intergenic 60.0%
TCGTAGCCGTCCAGGGAAGC+AGG + chr1_2:57002703-57002722 Msa0079230:CDS 65.0%
TAGTCCGCCCCCAGACGCAT+TGG + chr1_2:57003204-57003223 Msa0079230:intron 65.0%
CACTCCAATGCGTCTGGGGG+CGG - chr1_2:57003211-57003230 None:intergenic 65.0%
CTGTAGCGGCCACCATCACG+GGG + chr1_2:57003250-57003269 Msa0079230:intron 65.0%
TAGTCCACCCCCAGACGCGT+TGG + chr1_2:57003339-57003358 Msa0079230:intron 65.0%
CCGGTACACTCCAACGCGTC+TGG - chr1_2:57003352-57003371 None:intergenic 65.0%
CTGTAGCGGCCACCATCACG+GGG + chr1_2:57003250-57003269 Msa0079230:intron 65.0%
! TTCGTGGTGGAGGCGGAGCA+AGG + chr1_2:57003422-57003441 Msa0079230:intron 65.0%
GCGGCCGCAAACCCTAAAGC+AGG + chr1_2:57003444-57003463 Msa0079230:intron 65.0%
GCTGTGACACCCTCCTCCCT+CGG + chr1_2:57003846-57003865 Msa0079230:intron 65.0%
CACTCCAACGCGTCTGGGGG+TGG - chr1_2:57003346-57003365 None:intergenic 70.0%
! GTGGTGGAGGCGGAGCAAGG+CGG + chr1_2:57003425-57003444 Msa0079230:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 57002291 57008282 57002291 ID=Msa0079230;Name=Msa0079230
chr1_2 mRNA 57002291 57008282 57002291 ID=Msa0079230-mRNA-1;Parent=Msa0079230;Name=Msa0079230-mRNA-1;_AED=0.19;_eAED=0.19;_QI=244|1|1|1|0.66|0.5|4|583|322
chr1_2 exon 57002291 57002532 57002291 ID=Msa0079230-mRNA-1:exon:17953;Parent=Msa0079230-mRNA-1
chr1_2 exon 57002654 57002830 57002654 ID=Msa0079230-mRNA-1:exon:17954;Parent=Msa0079230-mRNA-1
chr1_2 exon 57006583 57007142 57006583 ID=Msa0079230-mRNA-1:exon:17955;Parent=Msa0079230-mRNA-1
chr1_2 exon 57007466 57008282 57007466 ID=Msa0079230-mRNA-1:exon:17956;Parent=Msa0079230-mRNA-1
chr1_2 five_prime_UTR 57002291 57002532 57002291 ID=Msa0079230-mRNA-1:five_prime_utr;Parent=Msa0079230-mRNA-1
chr1_2 five_prime_UTR 57002654 57002655 57002654 ID=Msa0079230-mRNA-1:five_prime_utr;Parent=Msa0079230-mRNA-1
chr1_2 CDS 57002656 57002830 57002656 ID=Msa0079230-mRNA-1:cds;Parent=Msa0079230-mRNA-1
chr1_2 CDS 57006583 57007142 57006583 ID=Msa0079230-mRNA-1:cds;Parent=Msa0079230-mRNA-1
chr1_2 CDS 57007466 57007699 57007466 ID=Msa0079230-mRNA-1:cds;Parent=Msa0079230-mRNA-1
chr1_2 three_prime_UTR 57007700 57008282 57007700 ID=Msa0079230-mRNA-1:three_prime_utr;Parent=Msa0079230-mRNA-1
Gene Sequence

>Msa0079230

ATGGAACAAGCAGTTTTGGATGACATAATCAATCGACTCCTTGAAGTTCGTAGCCGTCCAGGGAAGCAGGTTCAGCTGTCGGAGACGGAGATCCGTCAGCTATGTTCTACTGCTAGAGAGATTTTCTTGCAGCAACCTAATTTATTGGAGCTTGAAGCACCTATTAAGATTTGTGGCGACATACATGGTCAATATTCTGATCTTCTAAGGCTTTTTGAGTATGGTGGATTACCTCCTCAGGCCAACTACTTGTTTTTGGGTGATTATGTGGATCGAGGGAAGCAAAGTTTAGAAACAATATGCCTTCTCTTAGCATATAAAATAAAGTATCCTGAGAATTTTTTTCTTTTGCGGGGAAACCATGAATGTGCTTCTATTAACCGTATATATGGATTTTATGATGAGTGTAAAAGAAGGTTCAATGTAAGGATATGGAAGGTGTTTACTGATTGCTTCAATTGCCTACCTGTGGCAGCCCTCATTGATGAAAAGATTTTGTGCATGCATGGCGGACTTTCTCCTGACTTACATAATTTGGATCAGATTAGAAACCTACAGAGGCCGACTGATGTGCCTGATACAGGTTTGCTTTGCGATCTCCTCTGGTCAGACCCTAGCAAAGAAGTTCAAGGTTGGGGAATGAATGACAGGGGAGTGTCATATACATTTGGTGCTGATAAGGTCTCAGAGTTTCTTCAGAAGCATGATTTGGATCTTATTTGCCGTGCTCATCAGGTGGTGGAGGATGGATATGAGTTCTTTGCTAACCGGCAGCTTGTAACAATATTTTCGGCGCCTAATTACTGTGGGGAGTTTGACAACGCTGGTGCTATGATGAGTGTTGATGAGACACTAATGTGCTCTTTCCAAATATTAAAGCCAGCTGATAAAAAAACAAAGCTCAATTTTGGAAGTACGACCACTACTAAACCAGGAAACTCTCCAGCAGGTGTAAAGGTAGGAAGATAG
Protein sequence

>Msa0079230

MEQAVLDDIINRLLEVRSRPGKQVQLSETEIRQLCSTAREIFLQQPNLLELEAPIKICGDIHGQYSDLLRLFEYGGLPPQANYLFLGDYVDRGKQSLETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRFNVRIWKVFTDCFNCLPVAALIDEKILCMHGGLSPDLHNLDQIRNLQRPTDVPDTGLLCDLLWSDPSKEVQGWGMNDRGVSYTFGADKVSEFLQKHDLDLICRAHQVVEDGYEFFANRQLVTIFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPADKKTKLNFGSTTTTKPGNSPAGVKVGR*