Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076810 | XP_013449858.1 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076810 | sp|Q94JW0|DOHH_ARATH | 75.884 | 311 | 75 | 0 | 7 | 317 | 4 | 314 | 2.40e-168 | 473 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076810 | A0A072U3H2 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0013050 | Msa1076810 | 0.806568 | 7.724093e-50 | -8.615850e-47 |
| Msa0024210 | Msa1076810 | 0.846603 | 1.957809e-59 | -8.615850e-47 |
| Msa0039900 | Msa1076810 | 0.813755 | 2.179510e-51 | -8.615850e-47 |
| Msa0063350 | Msa1076810 | 0.807741 | 4.357923e-50 | -8.615850e-47 |
| Msa0089820 | Msa1076810 | -0.821320 | 4.299618e-53 | -8.615850e-47 |
| Msa0120010 | Msa1076810 | 0.826414 | 2.748597e-54 | -8.615850e-47 |
| Msa0120020 | Msa1076810 | 0.827404 | 1.594074e-54 | -8.615850e-47 |
| Msa0613970 | Msa1076810 | -0.809205 | 2.122618e-50 | -8.615850e-47 |
| Msa0648240 | Msa1076810 | 0.816362 | 5.749783e-52 | -8.615850e-47 |
| Msa0661190 | Msa1076810 | 0.825235 | 5.235004e-54 | -8.615850e-47 |
| Msa0721280 | Msa1076810 | -0.813949 | 1.975016e-51 | -8.615850e-47 |
| Msa0731940 | Msa1076810 | -0.810053 | 1.395347e-50 | -8.615850e-47 |
| Msa0756630 | Msa1076810 | 0.805517 | 1.284809e-49 | -8.615850e-47 |
| Msa0757450 | Msa1076810 | 0.820356 | 7.162232e-53 | -8.615850e-47 |
| Msa0757500 | Msa1076810 | 0.809217 | 2.109897e-50 | -8.615850e-47 |
| Msa0777570 | Msa1076810 | 0.839005 | 2.052246e-57 | -8.615850e-47 |
| Msa0794510 | Msa1076810 | 0.808531 | 2.958630e-50 | -8.615850e-47 |
| Msa0810220 | Msa1076810 | -0.805475 | 1.311150e-49 | -8.615850e-47 |
| Msa0837420 | Msa1076810 | 0.803227 | 3.854124e-49 | -8.615850e-47 |
| Msa0140500 | Msa1076810 | 0.824886 | 6.328783e-54 | -8.615850e-47 |
| Msa0140510 | Msa1076810 | 0.819205 | 1.312437e-52 | -8.615850e-47 |
| Msa0150800 | Msa1076810 | -0.819813 | 9.536019e-53 | -8.615850e-47 |
| Msa0150840 | Msa1076810 | -0.826511 | 2.606159e-54 | -8.615850e-47 |
| Msa0180500 | Msa1076810 | -0.806270 | 8.923298e-50 | -8.615850e-47 |
| Msa0183010 | Msa1076810 | 0.807012 | 6.221597e-50 | -8.615850e-47 |
| Msa0209500 | Msa1076810 | -0.813517 | 2.458917e-51 | -8.615850e-47 |
| Msa0229490 | Msa1076810 | 0.810481 | 1.128441e-50 | -8.615850e-47 |
| Msa0236510 | Msa1076810 | 0.812682 | 3.748997e-51 | -8.615850e-47 |
| Msa0236700 | Msa1076810 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0365860 | Msa1076810 | -0.812372 | 4.382191e-51 | -8.615850e-47 |
| Msa0381610 | Msa1076810 | 0.822588 | 2.186242e-53 | -8.615850e-47 |
| Msa0383400 | Msa1076810 | 0.801653 | 8.134374e-49 | -8.615850e-47 |
| Msa0390400 | Msa1076810 | 0.806627 | 7.505044e-50 | -8.615850e-47 |
| Msa0412840 | Msa1076810 | -0.800817 | 1.206312e-48 | -8.615850e-47 |
| Msa0414950 | Msa1076810 | 0.821406 | 4.105746e-53 | -8.615850e-47 |
| Msa0425790 | Msa1076810 | -0.802211 | 6.247718e-49 | -8.615850e-47 |
| Msa0436280 | Msa1076810 | 0.808777 | 2.621945e-50 | -8.615850e-47 |
| Msa0457510 | Msa1076810 | -0.808280 | 3.346230e-50 | -8.615850e-47 |
| Msa1004900 | Msa1076810 | 0.813797 | 2.134050e-51 | -8.615850e-47 |
| Msa1018990 | Msa1076810 | 0.800749 | 1.245494e-48 | -8.615850e-47 |
| Msa1029080 | Msa1076810 | 0.812054 | 5.142482e-51 | -8.615850e-47 |
| Msa1040400 | Msa1076810 | -0.807713 | 4.418577e-50 | -8.615850e-47 |
| Msa1054150 | Msa1076810 | 0.818386 | 2.013716e-52 | -8.615850e-47 |
| Msa1075220 | Msa1076810 | 0.829813 | 4.171557e-55 | -8.615850e-47 |
| Msa1076810 | Msa1114350 | 0.807687 | 4.474922e-50 | -8.615850e-47 |
| Msa1076810 | Msa1116130 | 0.825507 | 4.513705e-54 | -8.615850e-47 |
| Msa1076810 | Msa1130270 | 0.804898 | 1.732112e-49 | -8.615850e-47 |
| Msa1076810 | Msa1137570 | -0.830354 | 3.078663e-55 | -8.615850e-47 |
| Msa1076810 | Msa1139000 | 0.813296 | 2.750795e-51 | -8.615850e-47 |
| Msa1076810 | Msa1145250 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa1076810 | Msa1156170 | 0.808459 | 3.064876e-50 | -8.615850e-47 |
| Msa1076810 | Msa1162550 | 0.807055 | 6.093129e-50 | -8.615850e-47 |
| Msa1076810 | Msa1163650 | 0.896529 | 3.379273e-76 | -8.615850e-47 |
| Msa1076810 | Msa1163730 | -0.804110 | 2.528380e-49 | -8.615850e-47 |
| Msa1076810 | Msa1188600 | 0.801491 | 8.782858e-49 | -8.615850e-47 |
| Msa1076810 | Msa1190890 | 0.800433 | 1.444760e-48 | -8.615850e-47 |
| Msa1076810 | Msa1201430 | 0.808531 | 2.958630e-50 | -8.615850e-47 |
| Msa1076810 | Msa1204100 | 0.819347 | 1.218039e-52 | -8.615850e-47 |
| Msa1076810 | Msa1208890 | 0.812699 | 3.718196e-51 | -8.615850e-47 |
| Msa1076810 | Msa1211140 | 0.850612 | 1.517251e-60 | -8.615850e-47 |
| Msa1076810 | Msa1211150 | 0.814971 | 1.174122e-51 | -8.615850e-47 |
| Msa1076810 | Msa1242580 | 0.808158 | 3.552942e-50 | -8.615850e-47 |
| Msa1076810 | Msa1245940 | 0.808891 | 2.478067e-50 | -8.615850e-47 |
| Msa1076810 | Msa1259070 | 0.814746 | 1.316483e-51 | -8.615850e-47 |
| Msa1076810 | Msa1259490 | 0.800646 | 1.307408e-48 | -8.615850e-47 |
| Msa1076810 | Msa1259590 | 0.844763 | 6.180028e-59 | -8.615850e-47 |
| Msa1076810 | Msa1269580 | 0.816524 | 5.291328e-52 | -8.615850e-47 |
| Msa1076810 | Msa1293480 | 0.843370 | 1.460864e-58 | -8.615850e-47 |
| Msa1076810 | Msa1294610 | 0.802050 | 6.742973e-49 | -8.615850e-47 |
| Msa1076810 | Msa1296460 | 0.845646 | 3.566768e-59 | -8.615850e-47 |
| Msa1076810 | Msa1298510 | -0.800146 | 1.652592e-48 | -8.615850e-47 |
| Msa1076810 | Msa1299290 | 0.846744 | 1.791553e-59 | -8.615850e-47 |
| Msa1076810 | Msa1299300 | 0.823942 | 1.055648e-53 | -8.615850e-47 |
| Msa1076810 | Msa1310770 | 0.841648 | 4.182021e-58 | -8.615850e-47 |
| Msa1076810 | Msa1327050 | -0.800849 | 1.188389e-48 | -8.615850e-47 |
| Msa1076810 | Msa1329050 | 0.818604 | 1.797243e-52 | -8.615850e-47 |
| Msa1076810 | Msa1332040 | 0.843991 | 9.966006e-59 | -8.615850e-47 |
| Msa1076810 | Msa1345220 | -0.837647 | 4.593318e-57 | -8.615850e-47 |
| Msa1076810 | Msa1357890 | -0.813348 | 2.678321e-51 | -8.615850e-47 |
| Msa1076810 | Msa1359650 | 0.826435 | 2.716500e-54 | -8.615850e-47 |
| Msa1076810 | Msa1360980 | -0.801522 | 8.653315e-49 | -8.615850e-47 |
| Msa1076810 | Msa1370070 | 0.812857 | 3.432328e-51 | -8.615850e-47 |
| Msa1076810 | Msa1376090 | 0.907868 | 3.180054e-81 | -8.615850e-47 |
| Msa1076810 | Msa1377540 | 0.891717 | 3.078329e-74 | -8.615850e-47 |
| Msa1076810 | Msa1386710 | -0.801513 | 8.689695e-49 | -8.615850e-47 |
| Msa1076810 | Msa1390700 | -0.803374 | 3.594557e-49 | -8.615850e-47 |
| Msa1076810 | Msa1398090 | -0.809928 | 1.484484e-50 | -8.615850e-47 |
| Msa1076810 | Msa1400610 | 0.815439 | 9.238966e-52 | -8.615850e-47 |
| Msa1076810 | Msa1403340 | -0.805556 | 1.260807e-49 | -8.615850e-47 |
| Msa1076810 | Msa1416370 | -0.817328 | 3.490790e-52 | -8.615850e-47 |
| Msa1076810 | Msa1417810 | 0.815331 | 9.765928e-52 | -8.615850e-47 |
| Msa1076810 | Msa1429360 | 0.810239 | 1.272514e-50 | -8.615850e-47 |
| Msa1076810 | Msa1445390 | 0.822760 | 1.993212e-53 | -8.615850e-47 |
| Msa1076810 | Msa1445400 | 0.814190 | 1.747999e-51 | -8.615850e-47 |
| Msa1076810 | Msa1449340 | 0.831569 | 1.549718e-55 | -8.615850e-47 |
| Msa1076810 | Msa1449350 | 0.815205 | 1.041611e-51 | -8.615850e-47 |
| Msa0249560 | Msa1076810 | -0.815347 | 9.684440e-52 | -8.615850e-47 |
| Msa0259210 | Msa1076810 | -0.813519 | 2.457208e-51 | -8.615850e-47 |
| Msa0277420 | Msa1076810 | -0.801799 | 7.591769e-49 | -8.615850e-47 |
| Msa0294560 | Msa1076810 | 0.825900 | 3.641975e-54 | -8.615850e-47 |
| Msa0306210 | Msa1076810 | 0.830083 | 3.585917e-55 | -8.615850e-47 |
| Msa0336310 | Msa1076810 | -0.802077 | 6.655798e-49 | -8.615850e-47 |
| Msa0336320 | Msa1076810 | -0.812772 | 3.582423e-51 | -8.615850e-47 |
| Msa0521740 | Msa1076810 | -0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0553220 | Msa1076810 | 0.819566 | 1.085646e-52 | -8.615850e-47 |
| Msa0554380 | Msa1076810 | 0.812231 | 4.703714e-51 | -8.615850e-47 |
| Msa0844420 | Msa1076810 | -0.811374 | 7.230331e-51 | -8.615850e-47 |
| Msa0844490 | Msa1076810 | -0.821062 | 4.929248e-53 | -8.615850e-47 |
| Msa0867520 | Msa1076810 | 0.825618 | 4.248843e-54 | -8.615850e-47 |
| Msa0934890 | Msa1076810 | -0.800345 | 1.505371e-48 | -8.615850e-47 |
| Msa0936300 | Msa1076810 | -0.812786 | 3.557105e-51 | -8.615850e-47 |
| Msa0942550 | Msa1076810 | 0.846589 | 1.974938e-59 | -8.615850e-47 |
| Msa0942560 | Msa1076810 | 0.839844 | 1.242768e-57 | -8.615850e-47 |
| Msa0973100 | Msa1076810 | -0.800633 | 1.315070e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076810 | MtrunA17_Chr7g0260951 | 98.107 | 317 | 6 | 0 | 1 | 317 | 1 | 317 | 0.0 | 622 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1076810 | AT3G58180.1 | 75.884 | 311 | 75 | 0 | 7 | 317 | 4 | 314 | 2.44e-169 | 473 |
| Msa1076810 | AT3G62530.1 | 50.968 | 155 | 69 | 2 | 151 | 304 | 68 | 216 | 1.39e-41 | 144 |
| Msa1076810 | AT3G62530.1 | 36.923 | 130 | 78 | 3 | 22 | 150 | 92 | 218 | 2.71e-13 | 68.6 |
Find 85 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTACTTCTCGATGAGGAAAA+AGG | 0.236522 | 7_2:+75375624 | Msa1076810:CDS |
| CCTCGCACCGCCCTTATTCT+AGG | 0.251159 | 7_2:+75374531 | Msa1076810:CDS |
| TGCTGCTATTGTTGATTCCT+TGG | 0.290741 | 7_2:+75375707 | Msa1076810:CDS |
| ATTCACATCTCTAAGTATAT+TGG | 0.307934 | 7_2:-75376149 | None:intergenic |
| AAGCAGCTTTGTCTTGCAAT+TGG | 0.318055 | 7_2:-75376114 | None:intergenic |
| CACGAAGCTGCATTTGCATT+AGG | 0.319693 | 7_2:+75375085 | Msa1076810:CDS |
| AAAGGGAGTAACCTAGAATA+AGG | 0.319941 | 7_2:-75374542 | None:intergenic |
| GAAGCCCTTGGTTCAATTGC+AGG | 0.331761 | 7_2:+75376202 | Msa1076810:CDS |
| TGAAGCGTTCGGAGATTGGC+TGG | 0.334155 | 7_2:-75374470 | None:intergenic |
| ATAAGGGCGGTGCGAGGGGC+GGG | 0.339458 | 7_2:-75374525 | None:intergenic |
| CGGAGGCGATCGGCGAGTTC+AGG | 0.341586 | 7_2:-75374317 | None:intergenic |
| ACGAAGCTGCATTTGCATTA+GGG | 0.353033 | 7_2:+75375086 | Msa1076810:CDS |
| ATGCTAGAATTTGAAAGATC+AGG | 0.354231 | 7_2:+75377395 | Msa1076810:CDS |
| CAAGAGCTGGCCGGTGCTGC+AGG | 0.367951 | 7_2:-75375483 | None:intergenic |
| GTTCAGGTGTTAGAATAGTT+AGG | 0.369790 | 7_2:-75374301 | None:intergenic |
| TGCGAGGGGCGGGGCCTTTG+AGG | 0.372831 | 7_2:-75374515 | None:intergenic |
| TAAGGGCGGTGCGAGGGGCG+GGG | 0.381669 | 7_2:-75374524 | None:intergenic |
| CTTTGTGCAACAAGAGGCTC+TGG | 0.382092 | 7_2:-75377353 | None:intergenic |
| GCTGAAGCACTAGGCGCTAT+TGG | 0.386313 | 7_2:+75375294 | Msa1076810:CDS |
| GCTGCTATTGTTGATTCCTT+GGG | 0.393386 | 7_2:+75375708 | Msa1076810:CDS |
| AATAAGGGCGGTGCGAGGGG+CGG | 0.393478 | 7_2:-75374526 | None:intergenic |
| AAGAGATTCATCGAATTTGT+TGG | 0.413615 | 7_2:+75375060 | Msa1076810:CDS |
| GTTCTTCAGTTGGTCAACTA+AGG | 0.420278 | 7_2:+75375505 | Msa1076810:CDS |
| GAAAACGTTTAATGTACAAT+TGG | 0.420894 | 7_2:-75377532 | None:intergenic |
| GGGTGGAGAGACTTTCGTTT+CGG | 0.422867 | 7_2:+75378117 | Msa1076810:three_prime_UTR |
| ATGTTTCAATAAAGCACTCT+TGG | 0.443976 | 7_2:-75375733 | None:intergenic |
| GCTCTGAAGCGTTCGGAGAT+TGG | 0.445480 | 7_2:-75374474 | None:intergenic |
| CAATTGGAGGACGCATGAAC+AGG | 0.447305 | 7_2:-75377516 | None:intergenic |
| CTTCAAGAAGGTATACACTT+TGG | 0.450900 | 7_2:-75377316 | None:intergenic |
| GCCAGCTCTTGTTCTTCAGT+TGG | 0.457141 | 7_2:+75375495 | Msa1076810:CDS |
| TTCAGGTGTTAGAATAGTTA+GGG | 0.463599 | 7_2:-75374300 | None:intergenic |
| GTCTGTTGATCCTGCAGCAC+CGG | 0.466493 | 7_2:+75375473 | Msa1076810:CDS |
| GAAGAGTGCTCTGAAGCGTT+CGG | 0.477233 | 7_2:-75374481 | None:intergenic |
| ACTACCTCATGGCGAACAAT+GGG | 0.478742 | 7_2:-75375172 | None:intergenic |
| GTTTCTCGAACCTCTTGAGC+TGG | 0.484293 | 7_2:-75375363 | None:intergenic |
| GCAGGATCAACAGACTTAAA+CGG | 0.491292 | 7_2:-75375465 | None:intergenic |
| AACTGAGGTTAATGCAGGTA+TGG | 0.493370 | 7_2:-75375128 | None:intergenic |
| GCTTAGGCAGCTGAAGCACT+AGG | 0.495965 | 7_2:+75375285 | Msa1076810:intron |
| GAAGCGTTCGGAGATTGGCT+GGG | 0.496757 | 7_2:-75374469 | None:intergenic |
| AACGTTTAATGTACAATTGG+AGG | 0.500470 | 7_2:-75377529 | None:intergenic |
| TAGAATAAGGGCGGTGCGAG+GGG | 0.501591 | 7_2:-75374529 | None:intergenic |
| AGAAAGTTGCTGATTGTGAC+AGG | 0.506378 | 7_2:+75378096 | Msa1076810:three_prime_UTR |
| TGCTAGAATTTGAAAGATCA+GGG | 0.509212 | 7_2:+75377396 | Msa1076810:CDS |
| TACTACCTCATGGCGAACAA+TGG | 0.510393 | 7_2:-75375173 | None:intergenic |
| AAGATCAGGGAAATCGTTTG+AGG | 0.512480 | 7_2:+75377409 | Msa1076810:CDS |
| CGCTTCGTGCTCATCAGAGA+TGG | 0.513074 | 7_2:+75374413 | Msa1076810:CDS |
| CATGAGGCTGCTGAAGCCCT+TGG | 0.515557 | 7_2:+75376190 | Msa1076810:CDS |
| GCAGCCTCATGTCTAACCAT+TGG | 0.519278 | 7_2:-75376178 | None:intergenic |
| GTTTCAGATACTTATTGAGT+TGG | 0.527166 | 7_2:+75378146 | Msa1076810:three_prime_UTR |
| GTTCCTGTGCGAGTTGCTGT+TGG | 0.527224 | 7_2:+75374440 | Msa1076810:CDS |
| CTAGAATAAGGGCGGTGCGA+GGG | 0.531517 | 7_2:-75374530 | None:intergenic |
| TTCTCTCTTCGCAACCTCAA+AGG | 0.536423 | 7_2:+75374501 | Msa1076810:CDS |
| GGATTCTGATCCAGCTCAAG+AGG | 0.544300 | 7_2:+75375353 | Msa1076810:CDS |
| AAGGGAGTAACCTAGAATAA+GGG | 0.546220 | 7_2:-75374541 | None:intergenic |
| ACCAACTGAAGAACAAGAGC+TGG | 0.552840 | 7_2:-75375496 | None:intergenic |
| TGACAACTTTGTGCAACAAG+AGG | 0.553059 | 7_2:-75377359 | None:intergenic |
| GACTTAAACGGAGAAATAGC+AGG | 0.567631 | 7_2:-75375453 | None:intergenic |
| TTAAGAACTGAGGTTAATGC+AGG | 0.570810 | 7_2:-75375133 | None:intergenic |
| CGCATGAGATTGAAGTGACA+AGG | 0.571112 | 7_2:+75377596 | Msa1076810:three_prime_UTR |
| AGTCCAACAGCAACTCGCAC+AGG | 0.572500 | 7_2:-75374443 | None:intergenic |
| TAAAGCACTCTTGGAACCCA+AGG | 0.578502 | 7_2:-75375724 | None:intergenic |
| GAGTGCTTTATTGAAACATG+AGG | 0.578510 | 7_2:+75375737 | Msa1076810:CDS |
| ATGGCGAACAATGGGATGCA+AGG | 0.582507 | 7_2:-75375164 | None:intergenic |
| TTTGCACTTCGAAATGATGG+TGG | 0.586504 | 7_2:+75375672 | Msa1076810:CDS |
| CTTATGAAGACGGAGGCGAT+CGG | 0.587626 | 7_2:-75374327 | None:intergenic |
| AGAGTGTGGGCTTATGAAGA+CGG | 0.589224 | 7_2:-75374337 | None:intergenic |
| TAGGGATTTACTTCTCGATG+AGG | 0.598291 | 7_2:+75375617 | Msa1076810:intron |
| CTGCCGAAAATTCTTCAAGA+AGG | 0.610074 | 7_2:-75377328 | None:intergenic |
| GCATCCCATTGTTCGCCATG+AGG | 0.616911 | 7_2:+75375168 | Msa1076810:CDS |
| ACTGAAGAACAAGAGCTGGC+CGG | 0.622351 | 7_2:-75375492 | None:intergenic |
| AAAATTGTGAGAAGAGAGTG+TGG | 0.624309 | 7_2:-75374351 | None:intergenic |
| CTTGTCACTTCAATCTCATG+CGG | 0.624776 | 7_2:-75377595 | None:intergenic |
| CCTAGAATAAGGGCGGTGCG+AGG | 0.629672 | 7_2:-75374531 | None:intergenic |
| AATACCTGCAATTGAACCAA+GGG | 0.629721 | 7_2:-75376206 | None:intergenic |
| GCATCCAATGGTTAGACATG+AGG | 0.635787 | 7_2:+75376174 | Msa1076810:CDS |
| CAATACCTGCAATTGAACCA+AGG | 0.638670 | 7_2:-75376207 | None:intergenic |
| AGATGTGAATGAGCATCCAA+TGG | 0.641853 | 7_2:+75376162 | Msa1076810:CDS |
| GGAAAGATCATTAAGAACTG+AGG | 0.652674 | 7_2:-75375143 | None:intergenic |
| TTTGTGCAACAAGAGGCTCT+GGG | 0.657645 | 7_2:-75377352 | None:intergenic |
| AAATTGTGAGAAGAGAGTGT+GGG | 0.702881 | 7_2:-75374350 | None:intergenic |
| ACAGCAAAATAACGTAGACA+CGG | 0.706456 | 7_2:+75377619 | Msa1076810:three_prime_UTR |
| GTGTGGGCTTATGAAGACGG+AGG | 0.712416 | 7_2:-75374334 | None:intergenic |
| GGAGTAACCTAGAATAAGGG+CGG | 0.721114 | 7_2:-75374538 | None:intergenic |
| AGTTGCTGATTGTGACAGGG+TGG | 0.738672 | 7_2:+75378100 | Msa1076810:three_prime_UTR |
| GAAAGTTGCTGATTGTGACA+GGG | 0.739025 | 7_2:+75378097 | Msa1076810:three_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAAGTTATTTTTATGTTA+AGG | - | chr7_2:75374855-75374874 | None:intergenic | 10.0% |
| !!! | GGTTTTAAATTAATAATATT+AGG | + | chr7_2:75375598-75375617 | Msa1076810:intron | 10.0% |
| !!! | TTTTTAATCTATCTTCTATT+TGG | + | chr7_2:75376851-75376870 | Msa1076810:intron | 15.0% |
| !!! | ATTTTAACATTATTTACTTG+TGG | + | chr7_2:75377836-75377855 | Msa1076810:intron | 15.0% |
| !!! | TTTTTGTTTATAGTTCATTG+CGG | + | chr7_2:75374737-75374756 | Msa1076810:intron | 20.0% |
| !! | ATAAGTTGTTTATCCAAATA+GGG | + | chr7_2:75374829-75374848 | Msa1076810:intron | 20.0% |
| !!! | ATTAAGTTGTTTATCCAAAT+AGG | + | chr7_2:75374957-75374976 | Msa1076810:intron | 20.0% |
| !!! | TTAAGTTGTTTATCCAAATA+GGG | + | chr7_2:75374958-75374977 | Msa1076810:intron | 20.0% |
| !!! | TGCATTTATCTTTTTATACA+TGG | - | chr7_2:75376316-75376335 | None:intergenic | 20.0% |
| !! | TTTGAATAGTAAAAACTAAC+AGG | - | chr7_2:75376565-75376584 | None:intergenic | 20.0% |
| !!! | TTTTAAAGTTTTATGCTTCT+TGG | + | chr7_2:75376589-75376608 | Msa1076810:intron | 20.0% |
| !!! | AAATTCATGTTTTAGTGATT+TGG | - | chr7_2:75376922-75376941 | None:intergenic | 20.0% |
| !! | AAACATGAATTTATTTCCTT+TGG | + | chr7_2:75376930-75376949 | Msa1076810:intron | 20.0% |
| !!! | GTTCTATGTTTAGTAAATTT+TGG | - | chr7_2:75376982-75377001 | None:intergenic | 20.0% |
| !! | AATTAAATAGAAGTCAAACT+TGG | - | chr7_2:75377142-75377161 | None:intergenic | 20.0% |
| !! | AGTGATAAATAAAAACATTG+AGG | - | chr7_2:75377220-75377239 | None:intergenic | 20.0% |
| ! | AATTGAAGAGAAAAGGAAAA+GGG | - | chr7_2:75374562-75374581 | None:intergenic | 25.0% |
| ! | AAATTGAAGAGAAAAGGAAA+AGG | - | chr7_2:75374563-75374582 | None:intergenic | 25.0% |
| ! | CTTGAAAAGTTGAAGTAAAA+TGG | - | chr7_2:75374713-75374732 | None:intergenic | 25.0% |
| ! | GCAATGAACTATAAACAAAA+AGG | - | chr7_2:75374738-75374757 | None:intergenic | 25.0% |
| ! | GATAAGTTGTTTATCCAAAT+AGG | + | chr7_2:75374828-75374847 | Msa1076810:intron | 25.0% |
| ! | ACTAAGTTGTTTATCCAAAT+AGG | + | chr7_2:75374888-75374907 | Msa1076810:intron | 25.0% |
| ! | CTAAGTTGTTTATCCAAATA+GGG | + | chr7_2:75374889-75374908 | Msa1076810:intron | 25.0% |
| ! | TTGTTAAGTGTATTATTGCA+TGG | + | chr7_2:75375001-75375020 | Msa1076810:intron | 25.0% |
| !! | TAATTTGTATGTTGCTAACT+CGG | + | chr7_2:75375577-75375596 | Msa1076810:intron | 25.0% |
| ! | AAAAATTCAGAGAATCAAAC+AGG | - | chr7_2:75376050-75376069 | None:intergenic | 25.0% |
| !!! | ACTGTATTTGCTGAAATTTT+AGG | + | chr7_2:75376075-75376094 | Msa1076810:intron | 25.0% |
| !!! | ATTTTAGGTTGCATATGTTT+TGG | + | chr7_2:75376090-75376109 | Msa1076810:intron | 25.0% |
| !!! | TTTTAGGTTGCATATGTTTT+GGG | + | chr7_2:75376091-75376110 | Msa1076810:intron | 25.0% |
| ! | ATTCACATCTCTAAGTATAT+TGG | - | chr7_2:75376152-75376171 | None:intergenic | 25.0% |
| ! | ATGGTATTAATATTGCTTTG+TGG | + | chr7_2:75376284-75376303 | Msa1076810:intron | 25.0% |
| !! | GTCTAAGTAAATGTTCTTTT+TGG | + | chr7_2:75376384-75376403 | Msa1076810:intron | 25.0% |
| !! | GTTGCAACTTTTAGTATTTA+TGG | + | chr7_2:75376439-75376458 | Msa1076810:intron | 25.0% |
| ! | GTTTGCAAATAAAAAAGTAG+AGG | + | chr7_2:75376525-75376544 | Msa1076810:intron | 25.0% |
| !! | AAATAAAAAAGTAGAGGTGT+TGG | + | chr7_2:75376531-75376550 | Msa1076810:intron | 25.0% |
| ! | TTGGTTCAACTAAAAAAGTT+GGG | - | chr7_2:75376963-75376982 | None:intergenic | 25.0% |
| !! | TTTGGTTCAACTAAAAAAGT+TGG | - | chr7_2:75376964-75376983 | None:intergenic | 25.0% |
| !! | AACACAAATGTTATGTTTTG+TGG | + | chr7_2:75376999-75377018 | Msa1076810:intron | 25.0% |
| ! | ATTAAACTGAAGTCAAACTT+GGG | - | chr7_2:75377049-75377068 | None:intergenic | 25.0% |
| ! | AATTAAACTGAAGTCAAACT+TGG | - | chr7_2:75377050-75377069 | None:intergenic | 25.0% |
| ! | ACAAAAGAACTATGTAAACA+GGG | - | chr7_2:75377279-75377298 | None:intergenic | 25.0% |
| !! | ATACCTTCTTGAAGAATTTT+CGG | + | chr7_2:75377325-75377344 | Msa1076810:CDS | 25.0% |
| ! | GAAAACGTTTAATGTACAAT+TGG | - | chr7_2:75377535-75377554 | None:intergenic | 25.0% |
| !! | GTACATTAAACGTTTTCTTA+TGG | + | chr7_2:75377538-75377557 | Msa1076810:exon | 25.0% |
| ! | ATTTCTTAACTCAAAGTTGA+TGG | + | chr7_2:75377662-75377681 | Msa1076810:intron | 25.0% |
| !! | AGAAACATTTTGTGATGAAT+TGG | + | chr7_2:75377746-75377765 | Msa1076810:intron | 25.0% |
| !! | TAAAAGGTAGACTTTACTTT+TGG | - | chr7_2:75377788-75377807 | None:intergenic | 25.0% |
| ! | GTTATTCTTAGTTATGATTG+AGG | - | chr7_2:75377979-75377998 | None:intergenic | 25.0% |
| ! | AAGCACTTTGAATTACATAT+AGG | - | chr7_2:75378056-75378075 | None:intergenic | 25.0% |
| ! | TGTGCGTTAAAACTTTTTAG+GGG | - | chr7_2:75374274-75374293 | None:intergenic | 30.0% |
| ! | CTGTGCGTTAAAACTTTTTA+GGG | - | chr7_2:75374275-75374294 | None:intergenic | 30.0% |
| ! | ACTGTGCGTTAAAACTTTTT+AGG | - | chr7_2:75374276-75374295 | None:intergenic | 30.0% |
| TTCAGGTGTTAGAATAGTTA+GGG | - | chr7_2:75374303-75374322 | None:intergenic | 30.0% | |
| GCTGTAAAATTGAAGAGAAA+AGG | - | chr7_2:75374569-75374588 | None:intergenic | 30.0% | |
| AATACATGTTTCATTCTGGA+AGG | - | chr7_2:75374657-75374676 | None:intergenic | 30.0% | |
| TTCCAGAATGAAACATGTAT+TGG | + | chr7_2:75374656-75374675 | Msa1076810:intron | 30.0% | |
| TTCCAATACATGTTTCATTC+TGG | - | chr7_2:75374661-75374680 | None:intergenic | 30.0% | |
| ! | TTTTATGTTAAGGCCCTATT+TGG | - | chr7_2:75374845-75374864 | None:intergenic | 30.0% |
| TGATTGATTAAGTCCCTATT+TGG | - | chr7_2:75374974-75374993 | None:intergenic | 30.0% | |
| AAGAGATTCATCGAATTTGT+TGG | + | chr7_2:75375060-75375079 | Msa1076810:CDS | 30.0% | |
| TCAGAAAAGGAAGAAATAGA+AGG | - | chr7_2:75375208-75375227 | None:intergenic | 30.0% | |
| AAAAGTGACACATTCAGAAA+AGG | - | chr7_2:75375221-75375240 | None:intergenic | 30.0% | |
| TGTTTGTTTCAATCTTGCTT+AGG | + | chr7_2:75375269-75375288 | Msa1076810:intron | 30.0% | |
| !!! | TTCTCTTTTGAAGCATAGTT+TGG | + | chr7_2:75375332-75375351 | Msa1076810:CDS | 30.0% |
| AACATACAAATTACTCTCTC+TGG | - | chr7_2:75375570-75375589 | None:intergenic | 30.0% | |
| ! | ATGTTTCAATAAAGCACTCT+TGG | - | chr7_2:75375736-75375755 | None:intergenic | 30.0% |
| ! | GTTTAAAAGTACGAACGATA+TGG | - | chr7_2:75375883-75375902 | None:intergenic | 30.0% |
| AAAGTTAAGCAGCAACATTA+AGG | - | chr7_2:75376020-75376039 | None:intergenic | 30.0% | |
| ! | GCATTTAAAACCACATACTA+TGG | + | chr7_2:75376229-75376248 | Msa1076810:intron | 30.0% |
| ! | TATATTATTGACTGCAACAG+AGG | - | chr7_2:75376265-75376284 | None:intergenic | 30.0% |
| CTGTTGCAGTCAATAATATA+TGG | + | chr7_2:75376265-75376284 | Msa1076810:intron | 30.0% | |
| !! | AAAGTTTTATGCTTCTTGGT+TGG | + | chr7_2:75376593-75376612 | Msa1076810:intron | 30.0% |
| GTAGATACTTCTTTGTGATT+TGG | + | chr7_2:75376792-75376811 | Msa1076810:intron | 30.0% | |
| GACTAAACAGACTATATAAC+AGG | - | chr7_2:75376818-75376837 | None:intergenic | 30.0% | |
| TGGTTCAACTAAAAAAGTTG+GGG | - | chr7_2:75376962-75376981 | None:intergenic | 30.0% | |
| !! | CTTCTATTTAATTTTGCCTC+TGG | + | chr7_2:75377149-75377168 | Msa1076810:intron | 30.0% |
| GACAAAAGAACTATGTAAAC+AGG | - | chr7_2:75377280-75377299 | None:intergenic | 30.0% | |
| ATGCTAGAATTTGAAAGATC+AGG | + | chr7_2:75377395-75377414 | Msa1076810:CDS | 30.0% | |
| TGCTAGAATTTGAAAGATCA+GGG | + | chr7_2:75377396-75377415 | Msa1076810:CDS | 30.0% | |
| AACGTTTAATGTACAATTGG+AGG | - | chr7_2:75377532-75377551 | None:intergenic | 30.0% | |
| AAAACTAGCCCTATAAAACA+AGG | + | chr7_2:75377693-75377712 | Msa1076810:intron | 30.0% | |
| AAACTAGCCCTATAAAACAA+GGG | + | chr7_2:75377694-75377713 | Msa1076810:intron | 30.0% | |
| !!! | AGTTCAACCCTTGTTTTATA+GGG | - | chr7_2:75377704-75377723 | None:intergenic | 30.0% |
| GTGGAAAAATTGTAAAACTC+TGG | + | chr7_2:75377855-75377874 | Msa1076810:intron | 30.0% | |
| TCATACTTCATACCAAGATT+TGG | + | chr7_2:75377890-75377909 | Msa1076810:intron | 30.0% | |
| !! | TTACATGTATTTTGCTGTGA+TGG | + | chr7_2:75377999-75378018 | Msa1076810:intron | 30.0% |
| ! | AATTCAAAGTGCTTTGTTAC+AGG | + | chr7_2:75378062-75378081 | Msa1076810:intron | 30.0% |
| GTTTCAGATACTTATTGAGT+TGG | + | chr7_2:75378146-75378165 | Msa1076810:three_prime_UTR | 30.0% | |
| !! | TTAAAACTTTTTAGGGGCAC+AGG | - | chr7_2:75374268-75374287 | None:intergenic | 35.0% |
| GTTCAGGTGTTAGAATAGTT+AGG | - | chr7_2:75374304-75374323 | None:intergenic | 35.0% | |
| ! | AAATTGTGAGAAGAGAGTGT+GGG | - | chr7_2:75374353-75374372 | None:intergenic | 35.0% |
| AAAATTGTGAGAAGAGAGTG+TGG | - | chr7_2:75374354-75374373 | None:intergenic | 35.0% | |
| AAGGGAGTAACCTAGAATAA+GGG | - | chr7_2:75374544-75374563 | None:intergenic | 35.0% | |
| AAAGGGAGTAACCTAGAATA+AGG | - | chr7_2:75374545-75374564 | None:intergenic | 35.0% | |
| TTGTTTATAGTTCATTGCGG+AGG | + | chr7_2:75374740-75374759 | Msa1076810:intron | 35.0% | |
| ! | AACCAGCTTTTCTTTCTCTT+TGG | + | chr7_2:75375030-75375049 | Msa1076810:intron | 35.0% |
| TTAAGAACTGAGGTTAATGC+AGG | - | chr7_2:75375136-75375155 | None:intergenic | 35.0% | |
| GGAAAGATCATTAAGAACTG+AGG | - | chr7_2:75375146-75375165 | None:intergenic | 35.0% | |
| GAAGAAATAGAAGGCTACTA+CGG | - | chr7_2:75375199-75375218 | None:intergenic | 35.0% | |
| ! | TTGGTCAACTAAGGTTTGTT+TGG | + | chr7_2:75375514-75375533 | Msa1076810:intron | 35.0% |
| TTACTTCTCGATGAGGAAAA+AGG | + | chr7_2:75375624-75375643 | Msa1076810:CDS | 35.0% | |
| TACTTCTCGATGAGGAAAAA+GGG | + | chr7_2:75375625-75375644 | Msa1076810:CDS | 35.0% | |
| ! | CTTTTTGCACTTCGAAATGA+TGG | + | chr7_2:75375669-75375688 | Msa1076810:CDS | 35.0% |
| ! | GAGTGCTTTATTGAAACATG+AGG | + | chr7_2:75375737-75375756 | Msa1076810:CDS | 35.0% |
| TTGTATGAATTGCACGTAAG+TGG | + | chr7_2:75375811-75375830 | Msa1076810:intron | 35.0% | |
| ACTTCACATGAGAAAACATC+AGG | + | chr7_2:75375842-75375861 | Msa1076810:intron | 35.0% | |
| AAAACATCAGGTCAATCTAG+AGG | + | chr7_2:75375854-75375873 | Msa1076810:intron | 35.0% | |
| AAACATCAGGTCAATCTAGA+GGG | + | chr7_2:75375855-75375874 | Msa1076810:intron | 35.0% | |
| CGTTGAACCATTATATTCGT+TGG | + | chr7_2:75375902-75375921 | Msa1076810:intron | 35.0% | |
| TTCTGCTCCAACGAATATAA+TGG | - | chr7_2:75375912-75375931 | None:intergenic | 35.0% | |
| AATACCTGCAATTGAACCAA+GGG | - | chr7_2:75376209-75376228 | None:intergenic | 35.0% | |
| TCACATGATTCCATAGTATG+TGG | - | chr7_2:75376242-75376261 | None:intergenic | 35.0% | |
| TGAGCAGTTCAACTTAACTT+AGG | + | chr7_2:75376417-75376436 | Msa1076810:intron | 35.0% | |
| TGACTCAGTTCATATCTGTA+TGG | + | chr7_2:75376462-75376481 | Msa1076810:intron | 35.0% | |
| !!! | CATATCTGTATGGTTTTGAC+TGG | + | chr7_2:75376472-75376491 | Msa1076810:intron | 35.0% |
| TTATGCTTCTTGGTTGGATT+TGG | + | chr7_2:75376599-75376618 | Msa1076810:intron | 35.0% | |
| AGCGTCTAACTATTAGTTCA+TGG | + | chr7_2:75376646-75376665 | Msa1076810:intron | 35.0% | |
| GCGTCTAACTATTAGTTCAT+GGG | + | chr7_2:75376647-75376666 | Msa1076810:intron | 35.0% | |
| !!! | GTTGGTTCTACCTTTTTACA+TGG | + | chr7_2:75376712-75376731 | Msa1076810:intron | 35.0% |
| ATTCGTTGGTCCATGTAAAA+AGG | - | chr7_2:75376725-75376744 | None:intergenic | 35.0% | |
| TAATACGTGACAAAGCCTTA+TGG | - | chr7_2:75376749-75376768 | None:intergenic | 35.0% | |
| !! | ATTTGGTCGACTCTTTTTAC+TGG | + | chr7_2:75376868-75376887 | Msa1076810:intron | 35.0% |
| ! | CTTCAAGAAGGTATACACTT+TGG | - | chr7_2:75377319-75377338 | None:intergenic | 35.0% |
| AAAATCTTCAGCAAGTACCA+AGG | - | chr7_2:75377441-75377460 | None:intergenic | 35.0% | |
| ! | ACACTACTATCCTTTTCTCT+TGG | + | chr7_2:75377485-75377504 | Msa1076810:intron | 35.0% |
| ACAGCAAAATAACGTAGACA+CGG | + | chr7_2:75377619-75377638 | Msa1076810:three_prime_UTR | 35.0% | |
| !! | AACTCAAAGTTGATGGAATC+AGG | + | chr7_2:75377669-75377688 | Msa1076810:intron | 35.0% |
| !!! | CAGTTCAACCCTTGTTTTAT+AGG | - | chr7_2:75377705-75377724 | None:intergenic | 35.0% |
| AGTGGCAGAGCTATAATAAA+AGG | - | chr7_2:75377804-75377823 | None:intergenic | 35.0% | |
| ATTTGGCTGACAACAGAATT+TGG | + | chr7_2:75377907-75377926 | Msa1076810:intron | 35.0% | |
| TTTGGCTGACAACAGAATTT+GGG | + | chr7_2:75377908-75377927 | Msa1076810:intron | 35.0% | |
| !! | GGGATTTTGATAAACTCTTG+AGG | + | chr7_2:75377928-75377947 | Msa1076810:intron | 35.0% |
| AGGTCAAGAATGAGAATAAC+TGG | + | chr7_2:75377948-75377967 | Msa1076810:intron | 35.0% | |
| ! | TCGCTGATTAAGTCCCTATT+TGG | - | chr7_2:75374905-75374924 | None:intergenic | 40.0% |
| TGCCAAAGAGAAAGAAAAGC+TGG | - | chr7_2:75375035-75375054 | None:intergenic | 40.0% | |
| ACGAAGCTGCATTTGCATTA+GGG | + | chr7_2:75375086-75375105 | Msa1076810:CDS | 40.0% | |
| AACTGAGGTTAATGCAGGTA+TGG | - | chr7_2:75375131-75375150 | None:intergenic | 40.0% | |
| GACTTAAACGGAGAAATAGC+AGG | - | chr7_2:75375456-75375475 | None:intergenic | 40.0% | |
| GCAGGATCAACAGACTTAAA+CGG | - | chr7_2:75375468-75375487 | None:intergenic | 40.0% | |
| GTTCTTCAGTTGGTCAACTA+AGG | + | chr7_2:75375505-75375524 | Msa1076810:CDS | 40.0% | |
| TAGGGATTTACTTCTCGATG+AGG | + | chr7_2:75375617-75375636 | Msa1076810:intron | 40.0% | |
| TTTGCACTTCGAAATGATGG+TGG | + | chr7_2:75375672-75375691 | Msa1076810:CDS | 40.0% | |
| !! | TGCTGCTATTGTTGATTCCT+TGG | + | chr7_2:75375707-75375726 | Msa1076810:CDS | 40.0% |
| !! | GCTGCTATTGTTGATTCCTT+GGG | + | chr7_2:75375708-75375727 | Msa1076810:CDS | 40.0% |
| ! | AAGCAGCTTTGTCTTGCAAT+TGG | - | chr7_2:75376117-75376136 | None:intergenic | 40.0% |
| AGATGTGAATGAGCATCCAA+TGG | + | chr7_2:75376162-75376181 | Msa1076810:CDS | 40.0% | |
| CAATACCTGCAATTGAACCA+AGG | - | chr7_2:75376210-75376229 | None:intergenic | 40.0% | |
| !! | AAAAGTAGAGGTGTTGGAGA+AGG | + | chr7_2:75376537-75376556 | Msa1076810:intron | 40.0% |
| GACAATCTTTCTGTTCTCGT+TGG | + | chr7_2:75376694-75376713 | Msa1076810:intron | 40.0% | |
| ATGGACCAACGAATACCATA+AGG | + | chr7_2:75376731-75376750 | Msa1076810:intron | 40.0% | |
| ! | CAAAGCCTTATGGTATTCGT+TGG | - | chr7_2:75376739-75376758 | None:intergenic | 40.0% |
| AGTCAAACTTGGGTAGCATT+TGG | - | chr7_2:75377039-75377058 | None:intergenic | 40.0% | |
| CTGCCGAAAATTCTTCAAGA+AGG | - | chr7_2:75377331-75377350 | None:intergenic | 40.0% | |
| TGACAACTTTGTGCAACAAG+AGG | - | chr7_2:75377362-75377381 | None:intergenic | 40.0% | |
| AAGATCAGGGAAATCGTTTG+AGG | + | chr7_2:75377409-75377428 | Msa1076810:CDS | 40.0% | |
| ! | ATCGTTTGAGGTATACACCT+TGG | + | chr7_2:75377421-75377440 | Msa1076810:intron | 40.0% |
| ! | CTTGTCACTTCAATCTCATG+CGG | - | chr7_2:75377598-75377617 | None:intergenic | 40.0% |
| TAACGTAGACACGGAAAAAC+TGG | + | chr7_2:75377628-75377647 | Msa1076810:three_prime_UTR | 40.0% | |
| ! | TTATTATAGCTCTGCCACTG+TGG | + | chr7_2:75377805-75377824 | Msa1076810:intron | 40.0% |
| TAAAATGTCTCCTACCACAG+TGG | - | chr7_2:75377822-75377841 | None:intergenic | 40.0% | |
| TTCTGTTGTCAGCCAAATCT+TGG | - | chr7_2:75377905-75377924 | None:intergenic | 40.0% | |
| ! | AGAAAGTTGCTGATTGTGAC+AGG | + | chr7_2:75378096-75378115 | Msa1076810:three_prime_UTR | 40.0% |
| ! | GAAAGTTGCTGATTGTGACA+GGG | + | chr7_2:75378097-75378116 | Msa1076810:three_prime_UTR | 40.0% |
| AGAGTGTGGGCTTATGAAGA+CGG | - | chr7_2:75374340-75374359 | None:intergenic | 45.0% | |
| TTCTCTCTTCGCAACCTCAA+AGG | + | chr7_2:75374501-75374520 | Msa1076810:CDS | 45.0% | |
| GGAGTAACCTAGAATAAGGG+CGG | - | chr7_2:75374541-75374560 | None:intergenic | 45.0% | |
| CACGAAGCTGCATTTGCATT+AGG | + | chr7_2:75375085-75375104 | Msa1076810:CDS | 45.0% | |
| ACTACCTCATGGCGAACAAT+GGG | - | chr7_2:75375175-75375194 | None:intergenic | 45.0% | |
| TACTACCTCATGGCGAACAA+TGG | - | chr7_2:75375176-75375195 | None:intergenic | 45.0% | |
| ACCAACTGAAGAACAAGAGC+TGG | - | chr7_2:75375499-75375518 | None:intergenic | 45.0% | |
| ! | TAAAGCACTCTTGGAACCCA+AGG | - | chr7_2:75375727-75375746 | None:intergenic | 45.0% |
| GCATCCAATGGTTAGACATG+AGG | + | chr7_2:75376174-75376193 | Msa1076810:CDS | 45.0% | |
| GTCTGTTTAGTCTCTGCATC+TGG | + | chr7_2:75376826-75376845 | Msa1076810:intron | 45.0% | |
| TTTGTGCAACAAGAGGCTCT+GGG | - | chr7_2:75377355-75377374 | None:intergenic | 45.0% | |
| GGAACTGCAACCAAGAGAAA+AGG | - | chr7_2:75377498-75377517 | None:intergenic | 45.0% | |
| CGCATGAGATTGAAGTGACA+AGG | + | chr7_2:75377596-75377615 | Msa1076810:three_prime_UTR | 45.0% | |
| !!! | GTTTTAAATTAATAATATTA+GGG | + | chr7_2:75375599-75375618 | Msa1076810:intron | 5.0% |
| CTTATGAAGACGGAGGCGAT+CGG | - | chr7_2:75374330-75374349 | None:intergenic | 50.0% | |
| !! | GAAGAGTGCTCTGAAGCGTT+CGG | - | chr7_2:75374484-75374503 | None:intergenic | 50.0% |
| ATGGCGAACAATGGGATGCA+AGG | - | chr7_2:75375167-75375186 | None:intergenic | 50.0% | |
| GCTACTACGGTACTACCTCA+TGG | - | chr7_2:75375186-75375205 | None:intergenic | 50.0% | |
| GGATTCTGATCCAGCTCAAG+AGG | + | chr7_2:75375353-75375372 | Msa1076810:CDS | 50.0% | |
| GTTTCTCGAACCTCTTGAGC+TGG | - | chr7_2:75375366-75375385 | None:intergenic | 50.0% | |
| ACTGAAGAACAAGAGCTGGC+CGG | - | chr7_2:75375495-75375514 | None:intergenic | 50.0% | |
| GCCAGCTCTTGTTCTTCAGT+TGG | + | chr7_2:75375495-75375514 | Msa1076810:CDS | 50.0% | |
| GCAGCCTCATGTCTAACCAT+TGG | - | chr7_2:75376181-75376200 | None:intergenic | 50.0% | |
| GAAGCCCTTGGTTCAATTGC+AGG | + | chr7_2:75376202-75376221 | Msa1076810:CDS | 50.0% | |
| AAAGTTGGGGTAGCTGCCAA+AGG | - | chr7_2:75376949-75376968 | None:intergenic | 50.0% | |
| CTGTCATGTGACTCTACCAG+AGG | - | chr7_2:75377168-75377187 | None:intergenic | 50.0% | |
| CTTTGTGCAACAAGAGGCTC+TGG | - | chr7_2:75377356-75377375 | None:intergenic | 50.0% | |
| CAATTGGAGGACGCATGAAC+AGG | - | chr7_2:75377519-75377538 | None:intergenic | 50.0% | |
| ! | TATAGCTCTGCCACTGTGGT+AGG | + | chr7_2:75377809-75377828 | Msa1076810:intron | 50.0% |
| ! | AGTTGCTGATTGTGACAGGG+TGG | + | chr7_2:75378100-75378119 | Msa1076810:three_prime_UTR | 50.0% |
| GGGTGGAGAGACTTTCGTTT+CGG | + | chr7_2:75378117-75378136 | Msa1076810:three_prime_UTR | 50.0% | |
| GTGTGGGCTTATGAAGACGG+AGG | - | chr7_2:75374337-75374356 | None:intergenic | 55.0% | |
| CGCTTCGTGCTCATCAGAGA+TGG | + | chr7_2:75374413-75374432 | Msa1076810:CDS | 55.0% | |
| GTTCCTGTGCGAGTTGCTGT+TGG | + | chr7_2:75374440-75374459 | Msa1076810:CDS | 55.0% | |
| AGTCCAACAGCAACTCGCAC+AGG | - | chr7_2:75374446-75374465 | None:intergenic | 55.0% | |
| ! | GAAGCGTTCGGAGATTGGCT+GGG | - | chr7_2:75374472-75374491 | None:intergenic | 55.0% |
| ! | TGAAGCGTTCGGAGATTGGC+TGG | - | chr7_2:75374473-75374492 | None:intergenic | 55.0% |
| !! | GCTCTGAAGCGTTCGGAGAT+TGG | - | chr7_2:75374477-75374496 | None:intergenic | 55.0% |
| TAGAATAAGGGCGGTGCGAG+GGG | - | chr7_2:75374532-75374551 | None:intergenic | 55.0% | |
| CTAGAATAAGGGCGGTGCGA+GGG | - | chr7_2:75374533-75374552 | None:intergenic | 55.0% | |
| GCATCCCATTGTTCGCCATG+AGG | + | chr7_2:75375168-75375187 | Msa1076810:CDS | 55.0% | |
| ! | GCTTAGGCAGCTGAAGCACT+AGG | + | chr7_2:75375285-75375304 | Msa1076810:intron | 55.0% |
| ! | GCTGAAGCACTAGGCGCTAT+TGG | + | chr7_2:75375294-75375313 | Msa1076810:CDS | 55.0% |
| GTCTGTTGATCCTGCAGCAC+CGG | + | chr7_2:75375473-75375492 | Msa1076810:CDS | 55.0% | |
| CCTAGAATAAGGGCGGTGCG+AGG | - | chr7_2:75374534-75374553 | None:intergenic | 60.0% | |
| CCTCGCACCGCCCTTATTCT+AGG | + | chr7_2:75374531-75374550 | Msa1076810:CDS | 60.0% | |
| CATGAGGCTGCTGAAGCCCT+TGG | + | chr7_2:75376190-75376209 | Msa1076810:CDS | 60.0% | |
| AATAAGGGCGGTGCGAGGGG+CGG | - | chr7_2:75374529-75374548 | None:intergenic | 65.0% | |
| CGGAGGCGATCGGCGAGTTC+AGG | - | chr7_2:75374320-75374339 | None:intergenic | 70.0% | |
| ATAAGGGCGGTGCGAGGGGC+GGG | - | chr7_2:75374528-75374547 | None:intergenic | 70.0% | |
| !! | CAAGAGCTGGCCGGTGCTGC+AGG | - | chr7_2:75375486-75375505 | None:intergenic | 70.0% |
| TGCGAGGGGCGGGGCCTTTG+AGG | - | chr7_2:75374518-75374537 | None:intergenic | 75.0% | |
| TAAGGGCGGTGCGAGGGGCG+GGG | - | chr7_2:75374527-75374546 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_2 | gene | 75374252 | 75378212 | 75374252 | ID=Msa1076810;Name=Msa1076810 |
| chr7_2 | mRNA | 75374252 | 75378212 | 75374252 | ID=Msa1076810-mRNA-1;Parent=Msa1076810;Name=Msa1076810-mRNA-1;_AED=0.14;_eAED=0.14;_QI=135|1|1|1|0.85|0.75|8|232|317 |
| chr7_2 | exon | 75374252 | 75374552 | 75374252 | ID=Msa1076810-mRNA-1:exon:17932;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75375056 | 75375189 | 75375056 | ID=Msa1076810-mRNA-1:exon:17933;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75375291 | 75375526 | 75375291 | ID=Msa1076810-mRNA-1:exon:17934;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75375620 | 75375758 | 75375620 | ID=Msa1076810-mRNA-1:exon:17935;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75376097 | 75376223 | 75376097 | ID=Msa1076810-mRNA-1:exon:17936;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75377312 | 75377430 | 75377312 | ID=Msa1076810-mRNA-1:exon:17937;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75377514 | 75377649 | 75377514 | ID=Msa1076810-mRNA-1:exon:17938;Parent=Msa1076810-mRNA-1 |
| chr7_2 | exon | 75378084 | 75378212 | 75378084 | ID=Msa1076810-mRNA-1:exon:17939;Parent=Msa1076810-mRNA-1 |
| chr7_2 | five_prime_UTR | 75374252 | 75374386 | 75374252 | ID=Msa1076810-mRNA-1:five_prime_utr;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75374387 | 75374552 | 75374387 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75375056 | 75375189 | 75375056 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75375291 | 75375526 | 75375291 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75375620 | 75375758 | 75375620 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75376097 | 75376223 | 75376097 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75377312 | 75377430 | 75377312 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | CDS | 75377514 | 75377546 | 75377514 | ID=Msa1076810-mRNA-1:cds;Parent=Msa1076810-mRNA-1 |
| chr7_2 | three_prime_UTR | 75377547 | 75377649 | 75377547 | ID=Msa1076810-mRNA-1:three_prime_utr;Parent=Msa1076810-mRNA-1 |
| chr7_2 | three_prime_UTR | 75378084 | 75378212 | 75378084 | ID=Msa1076810-mRNA-1:three_prime_utr;Parent=Msa1076810-mRNA-1 |
| Gene Sequence |
| Protein sequence |
