Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868700 | XP_003604547.2 | 99.029 | 103 | 1 | 0 | 1 | 103 | 1 | 103 | 2.40e-68 | 210 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868700 | sp|A7HM43|RS17_FERNB | 53.571 | 84 | 39 | 0 | 2 | 85 | 4 | 87 | 6.02e-28 | 100 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868700 | G7JKN8 | 99.029 | 103 | 1 | 0 | 1 | 103 | 1 | 103 | 1.15e-68 | 210 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002230 | Msa0868700 | 0.807828 | 4.176963e-50 | -8.615850e-47 |
| Msa0006390 | Msa0868700 | 0.805709 | 1.171060e-49 | -8.615850e-47 |
| Msa0012040 | Msa0868700 | 0.804922 | 1.711996e-49 | -8.615850e-47 |
| Msa0015390 | Msa0868700 | 0.807539 | 4.810938e-50 | -8.615850e-47 |
| Msa0020410 | Msa0868700 | 0.839945 | 1.169697e-57 | -8.615850e-47 |
| Msa0021210 | Msa0868700 | 0.804888 | 1.740245e-49 | -8.615850e-47 |
| Msa0025730 | Msa0868700 | 0.816926 | 4.298438e-52 | -8.615850e-47 |
| Msa0026910 | Msa0868700 | 0.821829 | 3.279577e-53 | -8.615850e-47 |
| Msa0037840 | Msa0868700 | 0.806678 | 7.319873e-50 | -8.615850e-47 |
| Msa0037880 | Msa0868700 | 0.853776 | 1.910026e-61 | -8.615850e-47 |
| Msa0043980 | Msa0868700 | 0.802051 | 6.738494e-49 | -8.615850e-47 |
| Msa0057680 | Msa0868700 | -0.802779 | 4.770599e-49 | -8.615850e-47 |
| Msa0090320 | Msa0868700 | 0.804163 | 2.464102e-49 | -8.615850e-47 |
| Msa0090550 | Msa0868700 | 0.810213 | 1.288880e-50 | -8.615850e-47 |
| Msa0092990 | Msa0868700 | 0.808722 | 2.693640e-50 | -8.615850e-47 |
| Msa0104800 | Msa0868700 | 0.811295 | 7.518067e-51 | -8.615850e-47 |
| Msa0114430 | Msa0868700 | 0.815656 | 8.268640e-52 | -8.615850e-47 |
| Msa0604510 | Msa0868700 | 0.812516 | 4.075602e-51 | -8.615850e-47 |
| Msa0610430 | Msa0868700 | 0.822074 | 2.878111e-53 | -8.615850e-47 |
| Msa0626360 | Msa0868700 | 0.804673 | 1.929999e-49 | -8.615850e-47 |
| Msa0641670 | Msa0868700 | 0.807660 | 4.534212e-50 | -8.615850e-47 |
| Msa0649110 | Msa0868700 | 0.809749 | 1.622474e-50 | -8.615850e-47 |
| Msa0663920 | Msa0868700 | 0.826308 | 2.913892e-54 | -8.615850e-47 |
| Msa0679530 | Msa0868700 | 0.816767 | 4.666614e-52 | -8.615850e-47 |
| Msa0679710 | Msa0868700 | 0.809414 | 1.914316e-50 | -8.615850e-47 |
| Msa0680200 | Msa0868700 | 0.819540 | 1.100604e-52 | -8.615850e-47 |
| Msa0689260 | Msa0868700 | 0.805999 | 1.017562e-49 | -8.615850e-47 |
| Msa0692830 | Msa0868700 | 0.809300 | 2.025399e-50 | -8.615850e-47 |
| Msa0701010 | Msa0868700 | 0.839719 | 1.338964e-57 | -8.615850e-47 |
| Msa0711100 | Msa0868700 | 0.803518 | 3.355309e-49 | -8.615850e-47 |
| Msa0715700 | Msa0868700 | 0.803078 | 4.138933e-49 | -8.615850e-47 |
| Msa0722020 | Msa0868700 | 0.802800 | 4.723128e-49 | -8.615850e-47 |
| Msa0743720 | Msa0868700 | 0.805584 | 1.244249e-49 | -8.615850e-47 |
| Msa0748970 | Msa0868700 | 0.837086 | 6.395799e-57 | -8.615850e-47 |
| Msa0765180 | Msa0868700 | 0.815235 | 1.025733e-51 | -8.615850e-47 |
| Msa0769980 | Msa0868700 | 0.831862 | 1.312132e-55 | -8.615850e-47 |
| Msa0771720 | Msa0868700 | 0.835535 | 1.585499e-56 | -8.615850e-47 |
| Msa0773840 | Msa0868700 | 0.801999 | 6.906251e-49 | -8.615850e-47 |
| Msa0777230 | Msa0868700 | 0.810090 | 1.370352e-50 | -8.615850e-47 |
| Msa0784380 | Msa0868700 | 0.805253 | 1.459192e-49 | -8.615850e-47 |
| Msa0790660 | Msa0868700 | -0.820009 | 8.602885e-53 | -8.615850e-47 |
| Msa0794510 | Msa0868700 | -0.815227 | 1.029706e-51 | -8.615850e-47 |
| Msa0803890 | Msa0868700 | 0.801681 | 8.028930e-49 | -8.615850e-47 |
| Msa0804230 | Msa0868700 | 0.802840 | 4.635416e-49 | -8.615850e-47 |
| Msa0808080 | Msa0868700 | 0.800689 | 1.280823e-48 | -8.615850e-47 |
| Msa0820850 | Msa0868700 | 0.817566 | 3.085303e-52 | -8.615850e-47 |
| Msa0831850 | Msa0868700 | 0.808331 | 3.263562e-50 | -8.615850e-47 |
| Msa0832150 | Msa0868700 | 0.807525 | 4.843427e-50 | -8.615850e-47 |
| Msa0137640 | Msa0868700 | 0.805385 | 1.369796e-49 | -8.615850e-47 |
| Msa0145190 | Msa0868700 | 0.801485 | 8.804894e-49 | -8.615850e-47 |
| Msa0150840 | Msa0868700 | 0.807966 | 3.904209e-50 | -8.615850e-47 |
| Msa0151180 | Msa0868700 | 0.803403 | 3.543880e-49 | -8.615850e-47 |
| Msa0157100 | Msa0868700 | 0.817649 | 2.955539e-52 | -8.615850e-47 |
| Msa0161290 | Msa0868700 | 0.803324 | 3.680760e-49 | -8.615850e-47 |
| Msa0171540 | Msa0868700 | 0.802722 | 4.903138e-49 | -8.615850e-47 |
| Msa0178960 | Msa0868700 | 0.816214 | 6.207471e-52 | -8.615850e-47 |
| Msa0178970 | Msa0868700 | 0.823431 | 1.390452e-53 | -8.615850e-47 |
| Msa0180500 | Msa0868700 | 0.832272 | 1.039263e-55 | -8.615850e-47 |
| Msa0182740 | Msa0868700 | 0.808619 | 2.833875e-50 | -8.615850e-47 |
| Msa0188460 | Msa0868700 | 0.807775 | 4.285924e-50 | -8.615850e-47 |
| Msa0194440 | Msa0868700 | 0.806644 | 7.443875e-50 | -8.615850e-47 |
| Msa0197660 | Msa0868700 | 0.801480 | 8.826631e-49 | -8.615850e-47 |
| Msa0208090 | Msa0868700 | 0.801935 | 7.118429e-49 | -8.615850e-47 |
| Msa0217680 | Msa0868700 | 0.800804 | 1.213442e-48 | -8.615850e-47 |
| Msa0220740 | Msa0868700 | 0.806826 | 6.811253e-50 | -8.615850e-47 |
| Msa0228070 | Msa0868700 | 0.839648 | 1.397295e-57 | -8.615850e-47 |
| Msa0229380 | Msa0868700 | 0.802586 | 5.228526e-49 | -8.615850e-47 |
| Msa0379260 | Msa0868700 | 0.805661 | 1.198473e-49 | -8.615850e-47 |
| Msa0383800 | Msa0868700 | 0.810919 | 9.071292e-51 | -8.615850e-47 |
| Msa0388950 | Msa0868700 | 0.810976 | 8.819369e-51 | -8.615850e-47 |
| Msa0402790 | Msa0868700 | 0.805069 | 1.594727e-49 | -8.615850e-47 |
| Msa0412840 | Msa0868700 | 0.811250 | 7.691632e-51 | -8.615850e-47 |
| Msa0413410 | Msa0868700 | 0.803738 | 3.020994e-49 | -8.615850e-47 |
| Msa0416300 | Msa0868700 | 0.819744 | 9.890357e-53 | -8.615850e-47 |
| Msa0424320 | Msa0868700 | 0.820420 | 6.922813e-53 | -8.615850e-47 |
| Msa0425790 | Msa0868700 | 0.807516 | 4.866006e-50 | -8.615850e-47 |
| Msa0434180 | Msa0868700 | 0.835460 | 1.656926e-56 | -8.615850e-47 |
| Msa0438200 | Msa0868700 | 0.821569 | 3.765398e-53 | -8.615850e-47 |
| Msa0453350 | Msa0868700 | 0.804374 | 2.227644e-49 | -8.615850e-47 |
| Msa0467380 | Msa0868700 | 0.804089 | 2.553594e-49 | -8.615850e-47 |
| Msa0467640 | Msa0868700 | -0.810588 | 1.069532e-50 | -8.615850e-47 |
| Msa0472960 | Msa0868700 | -0.810109 | 1.357520e-50 | -8.615850e-47 |
| Msa0481280 | Msa0868700 | 0.826926 | 2.074623e-54 | -8.615850e-47 |
| Msa0239800 | Msa0868700 | 0.801015 | 1.099179e-48 | -8.615850e-47 |
| Msa0258760 | Msa0868700 | 0.800799 | 1.216331e-48 | -8.615850e-47 |
| Msa0264150 | Msa0868700 | 0.800709 | 1.269197e-48 | -8.615850e-47 |
| Msa0271530 | Msa0868700 | 0.840759 | 7.164782e-58 | -8.615850e-47 |
| Msa0275000 | Msa0868700 | 0.821471 | 3.967566e-53 | -8.615850e-47 |
| Msa0287410 | Msa0868700 | 0.801555 | 8.519136e-49 | -8.615850e-47 |
| Msa0289250 | Msa0868700 | 0.800325 | 1.519827e-48 | -8.615850e-47 |
| Msa0319170 | Msa0868700 | 0.845650 | 3.557357e-59 | -8.615850e-47 |
| Msa0321310 | Msa0868700 | 0.812054 | 5.140838e-51 | -8.615850e-47 |
| Msa0326110 | Msa0868700 | 0.809838 | 1.552570e-50 | -8.615850e-47 |
| Msa0335060 | Msa0868700 | 0.816670 | 4.907421e-52 | -8.615850e-47 |
| Msa0342750 | Msa0868700 | 0.840894 | 6.605444e-58 | -8.615850e-47 |
| Msa0343850 | Msa0868700 | 0.800458 | 1.427516e-48 | -8.615850e-47 |
| Msa0345350 | Msa0868700 | 0.814027 | 1.898947e-51 | -8.615850e-47 |
| Msa0488270 | Msa0868700 | 0.810119 | 1.350750e-50 | -8.615850e-47 |
| Msa0512750 | Msa0868700 | 0.817385 | 3.388779e-52 | -8.615850e-47 |
| Msa0514070 | Msa0868700 | -0.806992 | 6.281487e-50 | -8.615850e-47 |
| Msa0519000 | Msa0868700 | 0.842650 | 2.271973e-58 | -8.615850e-47 |
| Msa0523940 | Msa0868700 | 0.829342 | 5.430146e-55 | -8.615850e-47 |
| Msa0529040 | Msa0868700 | 0.810525 | 1.103711e-50 | -8.615850e-47 |
| Msa0562440 | Msa0868700 | 0.832918 | 7.186936e-56 | -8.615850e-47 |
| Msa0585230 | Msa0868700 | 0.809272 | 2.053587e-50 | -8.615850e-47 |
| Msa0594790 | Msa0868700 | 0.800701 | 1.273787e-48 | -8.615850e-47 |
| Msa0602390 | Msa0868700 | 0.806751 | 7.066238e-50 | -8.615850e-47 |
| Msa0844490 | Msa0868700 | 0.809889 | 1.513517e-50 | -8.615850e-47 |
| Msa0849030 | Msa0868700 | 0.855210 | 7.349540e-62 | -8.615850e-47 |
| Msa0857640 | Msa0868700 | 0.811959 | 5.392122e-51 | -8.615850e-47 |
| Msa0861130 | Msa0868700 | 0.819081 | 1.400418e-52 | -8.615850e-47 |
| Msa0868700 | Msa0876580 | 0.858033 | 1.086979e-62 | -8.615850e-47 |
| Msa0868700 | Msa0877250 | 0.827747 | 1.319009e-54 | -8.615850e-47 |
| Msa0868700 | Msa0900910 | 0.809366 | 1.960985e-50 | -8.615850e-47 |
| Msa0868700 | Msa0901070 | 0.831768 | 1.383870e-55 | -8.615850e-47 |
| Msa0868700 | Msa0923330 | 0.814625 | 1.400738e-51 | -8.615850e-47 |
| Msa0868700 | Msa0925290 | 0.822218 | 2.664623e-53 | -8.615850e-47 |
| Msa0868700 | Msa0925870 | 0.806636 | 7.471273e-50 | -8.615850e-47 |
| Msa0868700 | Msa0927380 | 0.808141 | 3.582316e-50 | -8.615850e-47 |
| Msa0868700 | Msa0932830 | 0.813755 | 2.180106e-51 | -8.615850e-47 |
| Msa0868700 | Msa0936300 | 0.825984 | 3.479392e-54 | -8.615850e-47 |
| Msa0868700 | Msa0966750 | 0.816102 | 6.575971e-52 | -8.615850e-47 |
| Msa0868700 | Msa0969270 | 0.800494 | 1.403860e-48 | -8.615850e-47 |
| Msa0868700 | Msa0969670 | 0.809093 | 2.244032e-50 | -8.615850e-47 |
| Msa0868700 | Msa0969810 | 0.802046 | 6.755792e-49 | -8.615850e-47 |
| Msa0868700 | Msa0971020 | 0.818224 | 2.191974e-52 | -8.615850e-47 |
| Msa0868700 | Msa0973100 | 0.815314 | 9.851205e-52 | -8.615850e-47 |
| Msa0868700 | Msa0974070 | 0.819133 | 1.362524e-52 | -8.615850e-47 |
| Msa0868700 | Msa0976670 | 0.800619 | 1.323681e-48 | -8.615850e-47 |
| Msa0868700 | Msa0982270 | 0.801625 | 8.244599e-49 | -8.615850e-47 |
| Msa0868700 | Msa0998690 | 0.807426 | 5.085124e-50 | -8.615850e-47 |
| Msa0868700 | Msa0999050 | -0.811721 | 6.076072e-51 | -8.615850e-47 |
| Msa0868700 | Msa0999100 | 0.806108 | 9.652960e-50 | -8.615850e-47 |
| Msa0868700 | Msa1003620 | 0.814621 | 1.403313e-51 | -8.615850e-47 |
| Msa0868700 | Msa1014540 | 0.818572 | 1.828154e-52 | -8.615850e-47 |
| Msa0868700 | Msa1030970 | 0.812714 | 3.689054e-51 | -8.615850e-47 |
| Msa0868700 | Msa1037420 | 0.800374 | 1.485410e-48 | -8.615850e-47 |
| Msa0868700 | Msa1039880 | 0.801774 | 7.682248e-49 | -8.615850e-47 |
| Msa0868700 | Msa1043390 | 0.829115 | 6.165616e-55 | -8.615850e-47 |
| Msa0868700 | Msa1043450 | 0.821739 | 3.439497e-53 | -8.615850e-47 |
| Msa0868700 | Msa1043510 | 0.808957 | 2.398897e-50 | -8.615850e-47 |
| Msa0868700 | Msa1054150 | -0.810827 | 9.499824e-51 | -8.615850e-47 |
| Msa0868700 | Msa1063510 | 0.856863 | 2.412324e-62 | -8.615850e-47 |
| Msa0868700 | Msa1075540 | 0.802751 | 4.834622e-49 | -8.615850e-47 |
| Msa0868700 | Msa1075650 | 0.806690 | 7.277102e-50 | -8.615850e-47 |
| Msa0868700 | Msa1077340 | 0.805320 | 1.413226e-49 | -8.615850e-47 |
| Msa0868700 | Msa1085740 | 0.801902 | 7.232046e-49 | -8.615850e-47 |
| Msa0868700 | Msa1087710 | 0.809060 | 2.280231e-50 | -8.615850e-47 |
| Msa0868700 | Msa1090260 | 0.801020 | 1.096410e-48 | -8.615850e-47 |
| Msa0868700 | Msa1109680 | 0.847055 | 1.472885e-59 | -8.615850e-47 |
| Msa0868700 | Msa1114350 | -0.804511 | 2.085587e-49 | -8.615850e-47 |
| Msa0868700 | Msa1115280 | 0.801236 | 9.903658e-49 | -8.615850e-47 |
| Msa0868700 | Msa1118330 | 0.813410 | 2.596015e-51 | -8.615850e-47 |
| Msa0868700 | Msa1131940 | -0.811775 | 5.914168e-51 | -8.615850e-47 |
| Msa0868700 | Msa1134450 | 0.803751 | 3.001887e-49 | -8.615850e-47 |
| Msa0868700 | Msa1137570 | 0.827367 | 1.626977e-54 | -8.615850e-47 |
| Msa0868700 | Msa1144040 | 0.823088 | 1.671733e-53 | -8.615850e-47 |
| Msa0868700 | Msa1154280 | 0.816384 | 5.686850e-52 | -8.615850e-47 |
| Msa0868700 | Msa1156020 | 0.828547 | 8.460701e-55 | -8.615850e-47 |
| Msa0868700 | Msa1172400 | 0.807679 | 4.493086e-50 | -8.615850e-47 |
| Msa0868700 | Msa1174040 | 0.836652 | 8.252935e-57 | -8.615850e-47 |
| Msa0868700 | Msa1181250 | 0.825054 | 5.779170e-54 | -8.615850e-47 |
| Msa0868700 | Msa1181330 | 0.823282 | 1.506718e-53 | -8.615850e-47 |
| Msa0868700 | Msa1193290 | 0.815245 | 1.020443e-51 | -8.615850e-47 |
| Msa0868700 | Msa1201120 | 0.806883 | 6.624726e-50 | -8.615850e-47 |
| Msa0868700 | Msa1210020 | 0.812230 | 4.705716e-51 | -8.615850e-47 |
| Msa0868700 | Msa1211140 | -0.805220 | 1.482697e-49 | -8.615850e-47 |
| Msa0868700 | Msa1217430 | -0.803781 | 2.959676e-49 | -8.615850e-47 |
| Msa0868700 | Msa1234970 | 0.806904 | 6.557080e-50 | -8.615850e-47 |
| Msa0868700 | Msa1240210 | 0.801382 | 9.242862e-49 | -8.615850e-47 |
| Msa0868700 | Msa1253800 | 0.806271 | 8.921288e-50 | -8.615850e-47 |
| Msa0868700 | Msa1255080 | 0.805549 | 1.265316e-49 | -8.615850e-47 |
| Msa0868700 | Msa1276440 | 0.810162 | 1.322268e-50 | -8.615850e-47 |
| Msa0868700 | Msa1277660 | 0.820203 | 7.763966e-53 | -8.615850e-47 |
| Msa0868700 | Msa1281510 | 0.819404 | 1.182238e-52 | -8.615850e-47 |
| Msa0868700 | Msa1284680 | 0.800575 | 1.351309e-48 | -8.615850e-47 |
| Msa0868700 | Msa1288050 | 0.812207 | 4.761441e-51 | -8.615850e-47 |
| Msa0868700 | Msa1293510 | 0.815378 | 9.535353e-52 | -8.615850e-47 |
| Msa0868700 | Msa1294820 | 0.802314 | 5.949100e-49 | -8.615850e-47 |
| Msa0868700 | Msa1296280 | 0.820695 | 5.986556e-53 | -8.615850e-47 |
| Msa0868700 | Msa1298510 | 0.811306 | 7.479477e-51 | -8.615850e-47 |
| Msa0868700 | Msa1299290 | -0.800292 | 1.543528e-48 | -8.615850e-47 |
| Msa0868700 | Msa1306760 | 0.801961 | 7.033984e-49 | -8.615850e-47 |
| Msa0868700 | Msa1310700 | 0.812868 | 3.413391e-51 | -8.615850e-47 |
| Msa0868700 | Msa1313140 | 0.807050 | 6.106687e-50 | -8.615850e-47 |
| Msa0868700 | Msa1336710 | 0.801608 | 8.309556e-49 | -8.615850e-47 |
| Msa0868700 | Msa1345220 | 0.807099 | 5.963455e-50 | -8.615850e-47 |
| Msa0868700 | Msa1353470 | 0.814776 | 1.296724e-51 | -8.615850e-47 |
| Msa0868700 | Msa1359650 | -0.808262 | 3.376450e-50 | -8.615850e-47 |
| Msa0868700 | Msa1362880 | 0.807075 | 6.032961e-50 | -8.615850e-47 |
| Msa0868700 | Msa1372580 | 0.825785 | 3.878973e-54 | -8.615850e-47 |
| Msa0868700 | Msa1392780 | 0.815398 | 9.435883e-52 | -8.615850e-47 |
| Msa0868700 | Msa1394730 | 0.825073 | 5.718037e-54 | -8.615850e-47 |
| Msa0868700 | Msa1403340 | 0.803665 | 3.128226e-49 | -8.615850e-47 |
| Msa0868700 | Msa1407970 | 0.800827 | 1.200579e-48 | -8.615850e-47 |
| Msa0868700 | Msa1410100 | 0.806878 | 6.642914e-50 | -8.615850e-47 |
| Msa0868700 | Msa1423870 | 0.803931 | 2.753990e-49 | -8.615850e-47 |
| Msa0868700 | Msa1424450 | 0.814319 | 1.637146e-51 | -8.615850e-47 |
| Msa0868700 | Msa1451550 | 0.816327 | 5.856814e-52 | -8.615850e-47 |
| Msa0868700 | Msa1451620 | -0.804287 | 2.322468e-49 | -8.615850e-47 |
| Msa0868700 | Msa1458750 | 0.811273 | 7.601738e-51 | -8.615850e-47 |
| Msa0868700 | Msa1466540 | 0.809629 | 1.721447e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868700 | MtrunA17_Chr4g0005421 | 99.029 | 103 | 1 | 0 | 1 | 103 | 1 | 103 | 2.20e-72 | 210 |
| Msa0868700 | MtrunA17_Chr6g0449611 | 97.087 | 103 | 3 | 0 | 1 | 103 | 1 | 103 | 2.32e-70 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0868700 | AT3G18880.2 | 70.526 | 95 | 28 | 0 | 1 | 95 | 1 | 95 | 2.58e-47 | 147 |
| Msa0868700 | AT3G18880.1 | 70.526 | 95 | 28 | 0 | 1 | 95 | 1 | 95 | 2.58e-47 | 147 |
| Msa0868700 | AT1G49400.1 | 79.518 | 83 | 17 | 0 | 1 | 83 | 1 | 83 | 1.31e-46 | 145 |
| Msa0868700 | AT1G79850.1 | 39.744 | 78 | 47 | 0 | 1 | 78 | 50 | 127 | 4.35e-13 | 61.6 |
Find 62 sgRNAs with CRISPR-Local
Find 131 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAAACGCACTTCCAAGTTTA+TGG | 0.116836 | 6_1:+2457188 | Msa0868700:CDS |
| TCATAATTCTGATTCATAAA+AGG | 0.163485 | 6_1:+2456147 | Msa0868700:five_prime_UTR |
| CTAAGATTCTTAATATTTAC+AGG | 0.200067 | 6_1:-2458254 | None:intergenic |
| TTACTTGTTTATGGATAAAT+TGG | 0.218405 | 6_1:-2458198 | None:intergenic |
| CTACTAATAAAGGCAGAAAT+TGG | 0.296451 | 6_1:+2458487 | Msa0868700:three_prime_UTR |
| TAAGAATTCGAATTGAGTTT+AGG | 0.310054 | 6_1:-2455955 | None:intergenic |
| AGGTTCGATTGGATTCTTCT+AGG | 0.331841 | 6_1:+2457518 | Msa0868700:intron |
| TGGGTTAGCTTGTATGTTGA+TGG | 0.335015 | 6_1:+2457975 | Msa0868700:three_prime_UTR |
| CAATTTCTGCCTTTATTAGT+AGG | 0.346401 | 6_1:-2458486 | None:intergenic |
| CATAATTCTGATTCATAAAA+GGG | 0.348152 | 6_1:+2456148 | Msa0868700:five_prime_UTR |
| TGGAAGTGCGTTTAATATAT+CGG | 0.349128 | 6_1:-2457179 | None:intergenic |
| GTATATCATTCATTGGTAAT+GGG | 0.352124 | 6_1:+2458327 | Msa0868700:three_prime_UTR |
| CCTACTGTATTTGAAAGTTA+AGG | 0.368946 | 6_1:-2458224 | None:intergenic |
| CATCTGAATTAGGGTTTGTT+GGG | 0.369331 | 6_1:+2457046 | Msa0868700:intron |
| TCATCTGAATTAGGGTTTGT+TGG | 0.386146 | 6_1:+2457045 | Msa0868700:intron |
| TGTATATCATTCATTGGTAA+TGG | 0.390294 | 6_1:+2458326 | Msa0868700:three_prime_UTR |
| GAATTAGGGTTTGTTGGGAT+TGG | 0.391008 | 6_1:+2457051 | Msa0868700:intron |
| CTATAATTCATTAGCACAAA+TGG | 0.398004 | 6_1:-2458078 | None:intergenic |
| ACACTGATACCTACTAATAA+AGG | 0.406746 | 6_1:+2458477 | Msa0868700:three_prime_UTR |
| ATGTGGCATGTTCCAAGGTT+GGG | 0.415289 | 6_1:+2457956 | Msa0868700:three_prime_UTR |
| TAAATATTAAGAATCTTAGT+AGG | 0.416323 | 6_1:+2458258 | Msa0868700:three_prime_UTR |
| CAACACTGACGGGCATATCA+TGG | 0.436617 | 6_1:+2458405 | Msa0868700:three_prime_UTR |
| CTTGTCATTTCAGGTTCGAT+TGG | 0.439317 | 6_1:+2457507 | Msa0868700:intron |
| TTCGAATAAGATGCAGAAAT+CGG | 0.439794 | 6_1:+2457113 | Msa0868700:CDS |
| CTGCAACTTCAGTTGACATA+AGG | 0.440057 | 6_1:+2458013 | Msa0868700:three_prime_UTR |
| AATGTGGCATGTTCCAAGGT+TGG | 0.451799 | 6_1:+2457955 | Msa0868700:three_prime_UTR |
| AAATCATGTATATCATTCAT+TGG | 0.458479 | 6_1:+2458320 | Msa0868700:three_prime_UTR |
| CTCTATTTGACAACACTGAC+GGG | 0.473162 | 6_1:+2458395 | Msa0868700:three_prime_UTR |
| GAGAAGATGAAGCAAGTAGT+AGG | 0.480871 | 6_1:+2457081 | Msa0868700:exon |
| GATGAAGCAAGTAGTAGGAA+TGG | 0.481818 | 6_1:+2457086 | Msa0868700:exon |
| GGGAATCGAGAAGCTTTAAT+CGG | 0.482927 | 6_1:+2456169 | Msa0868700:five_prime_UTR |
| GGGTTAGCTTGTATGTTGAT+GGG | 0.488516 | 6_1:+2457976 | Msa0868700:three_prime_UTR |
| CCGTCAGTGTTGTCAAATAG+AGG | 0.490476 | 6_1:-2458394 | None:intergenic |
| TCTGAGCAAGCGTAAACATT+GGG | 0.508662 | 6_1:+2457543 | Msa0868700:CDS |
| TTCATCATGAGCCATAAACT+TGG | 0.509537 | 6_1:-2457199 | None:intergenic |
| TTGAGTTTAGGTTGAGGTGG+AGG | 0.512034 | 6_1:-2455943 | None:intergenic |
| CAAATTTATGACGTAGATGT+AGG | 0.538933 | 6_1:-2457652 | None:intergenic |
| TTCGAATTGAGTTTAGGTTG+AGG | 0.542865 | 6_1:-2455949 | None:intergenic |
| CTCTGAGCAAGCGTAAACAT+TGG | 0.545204 | 6_1:+2457542 | Msa0868700:CDS |
| TAAGATGCAGAAATCGGTTG+TGG | 0.553827 | 6_1:+2457119 | Msa0868700:CDS |
| ACAGAGAATGAAGAAAATTG+AGG | 0.556180 | 6_1:-2456021 | None:intergenic |
| TATTTGCTCAAATTATGCTA+CGG | 0.564164 | 6_1:+2458441 | Msa0868700:three_prime_UTR |
| AACACTGACGGGCATATCAT+GGG | 0.565801 | 6_1:+2458406 | Msa0868700:three_prime_UTR |
| CCTTAACTTTCAAATACAGT+AGG | 0.568163 | 6_1:+2458224 | Msa0868700:three_prime_UTR |
| CATACAAGCTAACCCAACCT+TGG | 0.570317 | 6_1:-2457968 | None:intergenic |
| GAATTGAGTTTAGGTTGAGG+TGG | 0.576836 | 6_1:-2455946 | None:intergenic |
| GAAGCAAGTAGTAGGAATGG+TGG | 0.579237 | 6_1:+2457089 | Msa0868700:CDS |
| TTCTCAGACACTGTTGCAGA+GGG | 0.583798 | 6_1:-2457607 | None:intergenic |
| TATATCATTCATTGGTAATG+GGG | 0.589263 | 6_1:+2458328 | Msa0868700:three_prime_UTR |
| GTGCTAATGAATTATAGTGT+AGG | 0.591531 | 6_1:+2458084 | Msa0868700:three_prime_UTR |
| CTACGTCATAAATTTGCTCA+AGG | 0.597877 | 6_1:+2457659 | Msa0868700:exon |
| CCTCTATTTGACAACACTGA+CGG | 0.601987 | 6_1:+2458394 | Msa0868700:three_prime_UTR |
| AATGCGAGCTCGAACTCTGT+AGG | 0.604238 | 6_1:+2457628 | Msa0868700:CDS |
| TAAGATTCTTAATATTTACA+GGG | 0.604595 | 6_1:-2458253 | None:intergenic |
| ATAATTCTGATTCATAAAAG+GGG | 0.604851 | 6_1:+2456149 | Msa0868700:five_prime_UTR |
| GAAAACAATCTTTGCAACAT+CGG | 0.608322 | 6_1:+2457219 | Msa0868700:CDS |
| AGGATTAGAGATTTATAACA+TGG | 0.612341 | 6_1:+2458278 | Msa0868700:three_prime_UTR |
| ATTCTCAGACACTGTTGCAG+AGG | 0.627279 | 6_1:-2457608 | None:intergenic |
| TCAGACACTGTTGCAGAGGG+AGG | 0.634138 | 6_1:-2457604 | None:intergenic |
| CAATGTTTACGCTTGCTCAG+AGG | 0.639617 | 6_1:-2457541 | None:intergenic |
| TAATGGGGTGTAATCAGTCG+AGG | 0.664687 | 6_1:+2458343 | Msa0868700:three_prime_UTR |
| ATAGAGGCACTATAGCATAG+CGG | 0.787407 | 6_1:-2458378 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATCAATTGAAAAAATCAAA+AGG | - | chr6_1:2456070-2456089 | None:intergenic | 15.0% |
| !!! | AATGTTTTGATTATTTTTTC+TGG | + | chr6_1:2456092-2456111 | Msa0868700:intron | 15.0% |
| !! | AATCAAAATCGTATAATATA+TGG | + | chr6_1:2456646-2456665 | Msa0868700:intron | 15.0% |
| !! | TAAGATTCTTAATATTTACA+GGG | - | chr6_1:2458256-2458275 | None:intergenic | 15.0% |
| !! | TAAATATTAAGAATCTTAGT+AGG | + | chr6_1:2458258-2458277 | Msa0868700:three_prime_UTR | 15.0% |
| !!! | GAATTCTTATTTTTATCTCT+TGG | + | chr6_1:2455969-2455988 | Msa0868700:five_prime_UTR | 20.0% |
| !!! | GTTTTGATATTGTTTGATTT+AGG | + | chr6_1:2456114-2456133 | Msa0868700:intron | 20.0% |
| !! | TCATAATTCTGATTCATAAA+AGG | + | chr6_1:2456147-2456166 | Msa0868700:five_prime_UTR | 20.0% |
| !! | CATAATTCTGATTCATAAAA+GGG | + | chr6_1:2456148-2456167 | Msa0868700:five_prime_UTR | 20.0% |
| !! | ATAATTCTGATTCATAAAAG+GGG | + | chr6_1:2456149-2456168 | Msa0868700:five_prime_UTR | 20.0% |
| !!! | TATTCTTAGATTGTTGATTA+TGG | + | chr6_1:2456221-2456240 | Msa0868700:intron | 20.0% |
| !!! | TGAATTGAATGTGTTTTTAT+TGG | - | chr6_1:2456610-2456629 | None:intergenic | 20.0% |
| !!! | ATTCAATTCAAGTATTGATT+TGG | + | chr6_1:2456620-2456639 | Msa0868700:intron | 20.0% |
| !!! | TAATGAGTTGAATCAAAATA+TGG | - | chr6_1:2456845-2456864 | None:intergenic | 20.0% |
| !! | AATTTGATCTATATAAAGCT+TGG | + | chr6_1:2456898-2456917 | Msa0868700:intron | 20.0% |
| !! | AATACATATTCATCTGAATT+AGG | + | chr6_1:2457036-2457055 | Msa0868700:intron | 20.0% |
| !! | ATACATATTCATCTGAATTA+GGG | + | chr6_1:2457037-2457056 | Msa0868700:intron | 20.0% |
| !! | AGGTATTATAAAGTTAATCT+TGG | + | chr6_1:2457679-2457698 | Msa0868700:intron | 20.0% |
| !! | GGTATTATAAAGTTAATCTT+GGG | + | chr6_1:2457680-2457699 | Msa0868700:intron | 20.0% |
| !! | TTACTTGTTTATGGATAAAT+TGG | - | chr6_1:2458201-2458220 | None:intergenic | 20.0% |
| !! | CTAAGATTCTTAATATTTAC+AGG | - | chr6_1:2458257-2458276 | None:intergenic | 20.0% |
| !! | AAATCATGTATATCATTCAT+TGG | + | chr6_1:2458320-2458339 | Msa0868700:three_prime_UTR | 20.0% |
| ! | TAAGAATTCGAATTGAGTTT+AGG | - | chr6_1:2455958-2455977 | None:intergenic | 25.0% |
| !!! | TAGATTGTTGATTATGGTTT+TGG | + | chr6_1:2456227-2456246 | Msa0868700:intron | 25.0% |
| ! | CGAGTAGAACATTAATTTAT+TGG | - | chr6_1:2456280-2456299 | None:intergenic | 25.0% |
| !! | ACACTAATCATGATTTTTGA+AGG | - | chr6_1:2456325-2456344 | None:intergenic | 25.0% |
| ! | AATCATGATTAGTGTATGTT+TGG | + | chr6_1:2456330-2456349 | Msa0868700:intron | 25.0% |
| !!! | CTACTTTAAAACAACTAAAC+AGG | - | chr6_1:2456409-2456428 | None:intergenic | 25.0% |
| ! | GAATTTGTAACTAATTACAG+AGG | + | chr6_1:2456468-2456487 | Msa0868700:intron | 25.0% |
| ! | CAAAATCGTATAATATATGG+TGG | + | chr6_1:2456649-2456668 | Msa0868700:intron | 25.0% |
| ! | TTGTATGTGATTAAGTTTGT+AGG | + | chr6_1:2456743-2456762 | Msa0868700:intron | 25.0% |
| ! | TGTATGTGATTAAGTTTGTA+GGG | + | chr6_1:2456744-2456763 | Msa0868700:intron | 25.0% |
| !! | TGGTTTCTGAAAGAAAATTA+TGG | - | chr6_1:2456825-2456844 | None:intergenic | 25.0% |
| !! | TATCTTCCTTAATAGTCTTA+TGG | + | chr6_1:2456872-2456891 | Msa0868700:intron | 25.0% |
| ! | TGTTGTATTCTATTGTTCTT+TGG | + | chr6_1:2456931-2456950 | Msa0868700:intron | 25.0% |
| ! | AATTATTCGCAATACTAACT+CGG | - | chr6_1:2457248-2457267 | None:intergenic | 25.0% |
| ! | CTATAATTCATTAGCACAAA+TGG | - | chr6_1:2458081-2458100 | None:intergenic | 25.0% |
| !! | TTAAGGCTTTTACTTGTTTA+TGG | - | chr6_1:2458210-2458229 | None:intergenic | 25.0% |
| ! | AGGATTAGAGATTTATAACA+TGG | + | chr6_1:2458278-2458297 | Msa0868700:three_prime_UTR | 25.0% |
| ! | TGTATATCATTCATTGGTAA+TGG | + | chr6_1:2458326-2458345 | Msa0868700:three_prime_UTR | 25.0% |
| !! | GTATATCATTCATTGGTAAT+GGG | + | chr6_1:2458327-2458346 | Msa0868700:three_prime_UTR | 25.0% |
| !!! | TATATCATTCATTGGTAATG+GGG | + | chr6_1:2458328-2458347 | Msa0868700:three_prime_UTR | 25.0% |
| ! | TATTTGCTCAAATTATGCTA+CGG | + | chr6_1:2458441-2458460 | Msa0868700:three_prime_UTR | 25.0% |
| ACAGAGAATGAAGAAAATTG+AGG | - | chr6_1:2456024-2456043 | None:intergenic | 30.0% | |
| !! | TGTATGTTTGGTTTCAAGTT+TGG | + | chr6_1:2456342-2456361 | Msa0868700:intron | 30.0% |
| !! | ATGGACAAGATTGATTTTAG+AGG | + | chr6_1:2456366-2456385 | Msa0868700:intron | 30.0% |
| GTATGTGATTAAGTTTGTAG+GGG | + | chr6_1:2456745-2456764 | Msa0868700:intron | 30.0% | |
| ATTACGCCATAAGACTATTA+AGG | - | chr6_1:2456881-2456900 | None:intergenic | 30.0% | |
| TTGATCTATATAAAGCTTGG+TGG | + | chr6_1:2456901-2456920 | Msa0868700:intron | 30.0% | |
| TTCGAATAAGATGCAGAAAT+CGG | + | chr6_1:2457113-2457132 | Msa0868700:CDS | 30.0% | |
| !! | TATATCGGTTGAACATTTTG+TGG | - | chr6_1:2457167-2457186 | None:intergenic | 30.0% |
| ! | TGGAAGTGCGTTTAATATAT+CGG | - | chr6_1:2457182-2457201 | None:intergenic | 30.0% |
| GAAAACAATCTTTGCAACAT+CGG | + | chr6_1:2457219-2457238 | Msa0868700:CDS | 30.0% | |
| TAACAACACTGGTAAAAGAT+AGG | - | chr6_1:2457273-2457292 | None:intergenic | 30.0% | |
| ! | AACAGTGTCTTGTACAATTT+TGG | + | chr6_1:2457429-2457448 | Msa0868700:intron | 30.0% |
| CAAATTTATGACGTAGATGT+AGG | - | chr6_1:2457655-2457674 | None:intergenic | 30.0% | |
| TGGAATTGGAAATGAAGTTT+AGG | + | chr6_1:2457744-2457763 | Msa0868700:intron | 30.0% | |
| ! | TTGTAGCAACTTCTAGTTAT+TGG | + | chr6_1:2457853-2457872 | Msa0868700:intron | 30.0% |
| ! | TAATGGAATGGTAATTTTCG+TGG | + | chr6_1:2457919-2457938 | Msa0868700:intron | 30.0% |
| GTGCTAATGAATTATAGTGT+AGG | + | chr6_1:2458084-2458103 | Msa0868700:three_prime_UTR | 30.0% | |
| CCTACTGTATTTGAAAGTTA+AGG | - | chr6_1:2458227-2458246 | None:intergenic | 30.0% | |
| CCTTAACTTTCAAATACAGT+AGG | + | chr6_1:2458224-2458243 | Msa0868700:three_prime_UTR | 30.0% | |
| ACACTGATACCTACTAATAA+AGG | + | chr6_1:2458477-2458496 | Msa0868700:three_prime_UTR | 30.0% | |
| CAATTTCTGCCTTTATTAGT+AGG | - | chr6_1:2458489-2458508 | None:intergenic | 30.0% | |
| CTACTAATAAAGGCAGAAAT+TGG | + | chr6_1:2458487-2458506 | Msa0868700:three_prime_UTR | 30.0% | |
| !! | TTCGAATTGAGTTTAGGTTG+AGG | - | chr6_1:2455952-2455971 | None:intergenic | 35.0% |
| !! | GTTTGGTTTCAAGTTTGGAA+TGG | + | chr6_1:2456347-2456366 | Msa0868700:intron | 35.0% |
| ATCGTATAATATATGGTGGC+TGG | + | chr6_1:2456653-2456672 | Msa0868700:intron | 35.0% | |
| GTTTGTAGGGGAAAATATAC+TGG | + | chr6_1:2456757-2456776 | Msa0868700:intron | 35.0% | |
| TCATCTGAATTAGGGTTTGT+TGG | + | chr6_1:2457045-2457064 | Msa0868700:intron | 35.0% | |
| ! | CATCTGAATTAGGGTTTGTT+GGG | + | chr6_1:2457046-2457065 | Msa0868700:intron | 35.0% |
| TAAACGCACTTCCAAGTTTA+TGG | + | chr6_1:2457188-2457207 | Msa0868700:CDS | 35.0% | |
| TTCATCATGAGCCATAAACT+TGG | - | chr6_1:2457202-2457221 | None:intergenic | 35.0% | |
| AATGGCGTATTGCAAAACAA+TGG | - | chr6_1:2457326-2457345 | None:intergenic | 35.0% | |
| AGGCAACAATTTGTGCTAAA+TGG | - | chr6_1:2457344-2457363 | None:intergenic | 35.0% | |
| !! | TTTGATCAAACTGCTGTTTC+TGG | + | chr6_1:2457398-2457417 | Msa0868700:intron | 35.0% |
| ! | CTACGTCATAAATTTGCTCA+AGG | + | chr6_1:2457659-2457678 | Msa0868700:exon | 35.0% |
| ! | TTTACCCAGCTTTTAGATGT+TGG | + | chr6_1:2457711-2457730 | Msa0868700:intron | 35.0% |
| TACACCAACATCTAAAAGCT+GGG | - | chr6_1:2457718-2457737 | None:intergenic | 35.0% | |
| ATACACCAACATCTAAAAGC+TGG | - | chr6_1:2457719-2457738 | None:intergenic | 35.0% | |
| ! | AGCTTTTAGATGTTGGTGTA+TGG | + | chr6_1:2457718-2457737 | Msa0868700:intron | 35.0% |
| ! | TTTAGGTTTAGTTGAGTGAG+AGG | + | chr6_1:2457761-2457780 | Msa0868700:intron | 35.0% |
| TATATGCACTAGACTACAGT+CGG | - | chr6_1:2457792-2457811 | None:intergenic | 35.0% | |
| TCCAATGCTGCTGAATATAA+TGG | + | chr6_1:2457902-2457921 | Msa0868700:intron | 35.0% | |
| TCCATTATATTCAGCAGCAT+TGG | - | chr6_1:2457906-2457925 | None:intergenic | 35.0% | |
| ! | TGCTGCTGAATATAATGGAA+TGG | + | chr6_1:2457907-2457926 | Msa0868700:intron | 35.0% |
| ! | TTTTAATGTGGCATGTTCCA+AGG | + | chr6_1:2457951-2457970 | Msa0868700:three_prime_UTR | 35.0% |
| !! | GAATTGAGTTTAGGTTGAGG+TGG | - | chr6_1:2455949-2455968 | None:intergenic | 40.0% |
| ! | GGGAATCGAGAAGCTTTAAT+CGG | + | chr6_1:2456169-2456188 | Msa0868700:five_prime_UTR | 40.0% |
| ! | AATTCTAGCTGCTCCAAATG+TGG | + | chr6_1:2456552-2456571 | Msa0868700:intron | 40.0% |
| CATGTGTTTCGTTCCACATT+TGG | - | chr6_1:2456568-2456587 | None:intergenic | 40.0% | |
| ! | ACTGGAAAATAGTCTTAGCC+AGG | + | chr6_1:2456775-2456794 | Msa0868700:intron | 40.0% |
| !! | GAATTAGGGTTTGTTGGGAT+TGG | + | chr6_1:2457051-2457070 | Msa0868700:intron | 40.0% |
| GAGAAGATGAAGCAAGTAGT+AGG | + | chr6_1:2457081-2457100 | Msa0868700:exon | 40.0% | |
| GATGAAGCAAGTAGTAGGAA+TGG | + | chr6_1:2457086-2457105 | Msa0868700:exon | 40.0% | |
| TAAGATGCAGAAATCGGTTG+TGG | + | chr6_1:2457119-2457138 | Msa0868700:CDS | 40.0% | |
| ! | ATCGGTTGAACATTTTGTGG+TGG | - | chr6_1:2457164-2457183 | None:intergenic | 40.0% |
| CTACGTTGTAGTAACAACAC+TGG | - | chr6_1:2457284-2457303 | None:intergenic | 40.0% | |
| !! | TTGGATTTGCTGTGTGTTCT+TGG | + | chr6_1:2457448-2457467 | Msa0868700:intron | 40.0% |
| !! | GCTTTTGTGCTTGTCATTTC+AGG | + | chr6_1:2457498-2457517 | Msa0868700:intron | 40.0% |
| !! | CTTGTCATTTCAGGTTCGAT+TGG | + | chr6_1:2457507-2457526 | Msa0868700:intron | 40.0% |
| AGGTTCGATTGGATTCTTCT+AGG | + | chr6_1:2457518-2457537 | Msa0868700:intron | 40.0% | |
| TCTGAGCAAGCGTAAACATT+GGG | + | chr6_1:2457543-2457562 | Msa0868700:CDS | 40.0% | |
| TAGATGTTGGTGTATGGAAG+TGG | + | chr6_1:2457724-2457743 | Msa0868700:intron | 40.0% | |
| TTGGTGTATGGAAGTGGAAT+TGG | + | chr6_1:2457730-2457749 | Msa0868700:intron | 40.0% | |
| !! | TGGCAGGACGAATTTTAATG+TGG | + | chr6_1:2457939-2457958 | Msa0868700:intron | 40.0% |
| !! | TGGGTTAGCTTGTATGTTGA+TGG | + | chr6_1:2457975-2457994 | Msa0868700:three_prime_UTR | 40.0% |
| !! | GGGTTAGCTTGTATGTTGAT+GGG | + | chr6_1:2457976-2457995 | Msa0868700:three_prime_UTR | 40.0% |
| CTGCAACTTCAGTTGACATA+AGG | + | chr6_1:2458013-2458032 | Msa0868700:three_prime_UTR | 40.0% | |
| !! | ATAGAGGCACTATAGCATAG+CGG | - | chr6_1:2458381-2458400 | None:intergenic | 40.0% |
| CCTCTATTTGACAACACTGA+CGG | + | chr6_1:2458394-2458413 | Msa0868700:three_prime_UTR | 40.0% | |
| CTCTATTTGACAACACTGAC+GGG | + | chr6_1:2458395-2458414 | Msa0868700:three_prime_UTR | 40.0% | |
| !! | TTGAGTTTAGGTTGAGGTGG+AGG | - | chr6_1:2455946-2455965 | None:intergenic | 45.0% |
| CTCTACATGCTCAAACTACC+TGG | - | chr6_1:2456796-2456815 | None:intergenic | 45.0% | |
| GAAGCAAGTAGTAGGAATGG+TGG | + | chr6_1:2457089-2457108 | Msa0868700:CDS | 45.0% | |
| GCACAAATTGTTGCCTCTAG+TGG | + | chr6_1:2457348-2457367 | Msa0868700:intron | 45.0% | |
| CAATGTTTACGCTTGCTCAG+AGG | - | chr6_1:2457544-2457563 | None:intergenic | 45.0% | |
| CTCTGAGCAAGCGTAAACAT+TGG | + | chr6_1:2457542-2457561 | Msa0868700:CDS | 45.0% | |
| TTCTCAGACACTGTTGCAGA+GGG | - | chr6_1:2457610-2457629 | None:intergenic | 45.0% | |
| ATTCTCAGACACTGTTGCAG+AGG | - | chr6_1:2457611-2457630 | None:intergenic | 45.0% | |
| ! | GGAATGGTAATTTTCGTGGC+AGG | + | chr6_1:2457923-2457942 | Msa0868700:intron | 45.0% |
| AATGTGGCATGTTCCAAGGT+TGG | + | chr6_1:2457955-2457974 | Msa0868700:three_prime_UTR | 45.0% | |
| ATGTGGCATGTTCCAAGGTT+GGG | + | chr6_1:2457956-2457975 | Msa0868700:three_prime_UTR | 45.0% | |
| CATACAAGCTAACCCAACCT+TGG | - | chr6_1:2457971-2457990 | None:intergenic | 45.0% | |
| TAATGGGGTGTAATCAGTCG+AGG | + | chr6_1:2458343-2458362 | Msa0868700:three_prime_UTR | 45.0% | |
| CCGTCAGTGTTGTCAAATAG+AGG | - | chr6_1:2458397-2458416 | None:intergenic | 45.0% | |
| ! | AACACTGACGGGCATATCAT+GGG | + | chr6_1:2458406-2458425 | Msa0868700:three_prime_UTR | 45.0% |
| ! | AGTGCTGCTATAGCCACTAG+AGG | - | chr6_1:2457364-2457383 | None:intergenic | 50.0% |
| AATGCGAGCTCGAACTCTGT+AGG | + | chr6_1:2457628-2457647 | Msa0868700:CDS | 50.0% | |
| ! | CAACACTGACGGGCATATCA+TGG | + | chr6_1:2458405-2458424 | Msa0868700:three_prime_UTR | 50.0% |
| TCAGACACTGTTGCAGAGGG+AGG | - | chr6_1:2457607-2457626 | None:intergenic | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 2455940 | 2458559 | 2455940 | ID=Msa0868700;Name=Msa0868700 |
| chr6_1 | mRNA | 2455940 | 2458559 | 2455940 | ID=Msa0868700-mRNA-1;Parent=Msa0868700;Name=Msa0868700-mRNA-1;_AED=0.14;_eAED=0.14;_QI=191|1|1|1|0.25|0|5|626|103 |
| chr6_1 | exon | 2455940 | 2456041 | 2455940 | ID=Msa0868700-mRNA-1:exon:701;Parent=Msa0868700-mRNA-1 |
| chr6_1 | exon | 2456136 | 2456195 | 2456136 | ID=Msa0868700-mRNA-1:exon:702;Parent=Msa0868700-mRNA-1 |
| chr6_1 | exon | 2457058 | 2457248 | 2457058 | ID=Msa0868700-mRNA-1:exon:703;Parent=Msa0868700-mRNA-1 |
| chr6_1 | exon | 2457520 | 2457680 | 2457520 | ID=Msa0868700-mRNA-1:exon:704;Parent=Msa0868700-mRNA-1 |
| chr6_1 | exon | 2457945 | 2458559 | 2457945 | ID=Msa0868700-mRNA-1:exon:705;Parent=Msa0868700-mRNA-1 |
| chr6_1 | five_prime_UTR | 2455940 | 2456041 | 2455940 | ID=Msa0868700-mRNA-1:five_prime_utr;Parent=Msa0868700-mRNA-1 |
| chr6_1 | five_prime_UTR | 2456136 | 2456195 | 2456136 | ID=Msa0868700-mRNA-1:five_prime_utr;Parent=Msa0868700-mRNA-1 |
| chr6_1 | five_prime_UTR | 2457058 | 2457086 | 2457058 | ID=Msa0868700-mRNA-1:five_prime_utr;Parent=Msa0868700-mRNA-1 |
| chr6_1 | CDS | 2457087 | 2457248 | 2457087 | ID=Msa0868700-mRNA-1:cds;Parent=Msa0868700-mRNA-1 |
| chr6_1 | CDS | 2457520 | 2457669 | 2457520 | ID=Msa0868700-mRNA-1:cds;Parent=Msa0868700-mRNA-1 |
| chr6_1 | three_prime_UTR | 2457670 | 2457680 | 2457670 | ID=Msa0868700-mRNA-1:three_prime_utr;Parent=Msa0868700-mRNA-1 |
| chr6_1 | three_prime_UTR | 2457945 | 2458559 | 2457945 | ID=Msa0868700-mRNA-1:three_prime_utr;Parent=Msa0868700-mRNA-1 |
| Gene Sequence |
| Protein sequence |
