Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023400 | XP_013449036.1 | 97.447 | 235 | 6 | 0 | 1 | 235 | 1 | 235 | 7.06e-170 | 477 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023400 | A0A072U1M8 | 97.447 | 235 | 6 | 0 | 1 | 235 | 1 | 235 | 3.37e-170 | 477 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001590 | Msa1023400 | 0.808117 | 3.625776e-50 | -8.615850e-47 |
| Msa0002930 | Msa1023400 | 0.806228 | 9.108155e-50 | -8.615850e-47 |
| Msa0017510 | Msa1023400 | 0.830947 | 2.204004e-55 | -8.615850e-47 |
| Msa0021810 | Msa1023400 | 0.805969 | 1.032548e-49 | -8.615850e-47 |
| Msa0022640 | Msa1023400 | 0.807455 | 5.013996e-50 | -8.615850e-47 |
| Msa0040450 | Msa1023400 | 0.834844 | 2.369362e-56 | -8.615850e-47 |
| Msa0044020 | Msa1023400 | 0.807014 | 6.216173e-50 | -8.615850e-47 |
| Msa0046100 | Msa1023400 | 0.802948 | 4.401930e-49 | -8.615850e-47 |
| Msa0079080 | Msa1023400 | 0.831369 | 1.735520e-55 | -8.615850e-47 |
| Msa0103000 | Msa1023400 | 0.808770 | 2.630463e-50 | -8.615850e-47 |
| Msa0106790 | Msa1023400 | 0.802706 | 4.939047e-49 | -8.615850e-47 |
| Msa0110970 | Msa1023400 | 0.854979 | 8.579594e-62 | -8.615850e-47 |
| Msa0118400 | Msa1023400 | 0.837020 | 6.650765e-57 | -8.615850e-47 |
| Msa0615590 | Msa1023400 | 0.807001 | 6.254342e-50 | -8.615850e-47 |
| Msa0621490 | Msa1023400 | 0.801189 | 1.012706e-48 | -8.615850e-47 |
| Msa0623080 | Msa1023400 | 0.813342 | 2.686930e-51 | -8.615850e-47 |
| Msa0623700 | Msa1023400 | 0.805579 | 1.247232e-49 | -8.615850e-47 |
| Msa0629370 | Msa1023400 | 0.810495 | 1.120333e-50 | -8.615850e-47 |
| Msa0638280 | Msa1023400 | 0.821679 | 3.552234e-53 | -8.615850e-47 |
| Msa0638320 | Msa1023400 | 0.810844 | 9.419530e-51 | -8.615850e-47 |
| Msa0653020 | Msa1023400 | 0.811885 | 5.597642e-51 | -8.615850e-47 |
| Msa0657670 | Msa1023400 | 0.800924 | 1.146996e-48 | -8.615850e-47 |
| Msa0657970 | Msa1023400 | 0.812060 | 5.125473e-51 | -8.615850e-47 |
| Msa0661190 | Msa1023400 | -0.811398 | 7.141125e-51 | -8.615850e-47 |
| Msa0663920 | Msa1023400 | 0.810551 | 1.089893e-50 | -8.615850e-47 |
| Msa0677270 | Msa1023400 | 0.808747 | 2.660789e-50 | -8.615850e-47 |
| Msa0692230 | Msa1023400 | 0.800615 | 1.326408e-48 | -8.615850e-47 |
| Msa0698770 | Msa1023400 | 0.802446 | 5.589916e-49 | -8.615850e-47 |
| Msa0703230 | Msa1023400 | 0.805364 | 1.383313e-49 | -8.615850e-47 |
| Msa0705870 | Msa1023400 | 0.827142 | 1.841884e-54 | -8.615850e-47 |
| Msa0715310 | Msa1023400 | 0.805131 | 1.547771e-49 | -8.615850e-47 |
| Msa0743720 | Msa1023400 | 0.805319 | 1.414022e-49 | -8.615850e-47 |
| Msa0756630 | Msa1023400 | -0.800057 | 1.722520e-48 | -8.615850e-47 |
| Msa0760380 | Msa1023400 | 0.823082 | 1.677111e-53 | -8.615850e-47 |
| Msa0801760 | Msa1023400 | 0.839285 | 1.736658e-57 | -8.615850e-47 |
| Msa0812990 | Msa1023400 | 0.850602 | 1.527448e-60 | -8.615850e-47 |
| Msa0813720 | Msa1023400 | 0.801801 | 7.584288e-49 | -8.615850e-47 |
| Msa0813740 | Msa1023400 | 0.804755 | 1.854651e-49 | -8.615850e-47 |
| Msa0824680 | Msa1023400 | 0.829745 | 4.334899e-55 | -8.615850e-47 |
| Msa0827780 | Msa1023400 | 0.802655 | 5.060862e-49 | -8.615850e-47 |
| Msa0832370 | Msa1023400 | 0.808675 | 2.756881e-50 | -8.615850e-47 |
| Msa0124340 | Msa1023400 | 0.810988 | 8.766908e-51 | -8.615850e-47 |
| Msa0127660 | Msa1023400 | 0.806603 | 7.593152e-50 | -8.615850e-47 |
| Msa0128020 | Msa1023400 | 0.802141 | 6.457667e-49 | -8.615850e-47 |
| Msa0136070 | Msa1023400 | 0.802803 | 4.717326e-49 | -8.615850e-47 |
| Msa0140570 | Msa1023400 | 0.842331 | 2.759626e-58 | -8.615850e-47 |
| Msa0140780 | Msa1023400 | 0.800921 | 1.148681e-48 | -8.615850e-47 |
| Msa0143140 | Msa1023400 | -0.835564 | 1.559269e-56 | -8.615850e-47 |
| Msa0147560 | Msa1023400 | 0.809867 | 1.530110e-50 | -8.615850e-47 |
| Msa0157290 | Msa1023400 | 0.831065 | 2.062154e-55 | -8.615850e-47 |
| Msa0161680 | Msa1023400 | 0.811182 | 7.957605e-51 | -8.615850e-47 |
| Msa0165220 | Msa1023400 | 0.810760 | 9.821539e-51 | -8.615850e-47 |
| Msa0171300 | Msa1023400 | 0.805024 | 1.629508e-49 | -8.615850e-47 |
| Msa0184960 | Msa1023400 | 0.822122 | 2.804590e-53 | -8.615850e-47 |
| Msa0186890 | Msa1023400 | 0.802461 | 5.550168e-49 | -8.615850e-47 |
| Msa0192200 | Msa1023400 | 0.819317 | 1.237435e-52 | -8.615850e-47 |
| Msa0192510 | Msa1023400 | 0.833764 | 4.422737e-56 | -8.615850e-47 |
| Msa0193120 | Msa1023400 | 0.827359 | 1.634385e-54 | -8.615850e-47 |
| Msa0196130 | Msa1023400 | -0.809186 | 2.142543e-50 | -8.615850e-47 |
| Msa0203030 | Msa1023400 | 0.814784 | 1.291735e-51 | -8.615850e-47 |
| Msa0212310 | Msa1023400 | 0.801584 | 8.403888e-49 | -8.615850e-47 |
| Msa0215840 | Msa1023400 | 0.800712 | 1.266992e-48 | -8.615850e-47 |
| Msa0223690 | Msa1023400 | 0.808312 | 3.295019e-50 | -8.615850e-47 |
| Msa0234430 | Msa1023400 | 0.800064 | 1.717450e-48 | -8.615850e-47 |
| Msa0373930 | Msa1023400 | 0.807759 | 4.320230e-50 | -8.615850e-47 |
| Msa0380040 | Msa1023400 | 0.816942 | 4.262757e-52 | -8.615850e-47 |
| Msa0380740 | Msa1023400 | 0.828457 | 8.894408e-55 | -8.615850e-47 |
| Msa0381550 | Msa1023400 | 0.817818 | 2.707848e-52 | -8.615850e-47 |
| Msa0389340 | Msa1023400 | 0.813814 | 2.116017e-51 | -8.615850e-47 |
| Msa0398710 | Msa1023400 | 0.812800 | 3.533525e-51 | -8.615850e-47 |
| Msa0402330 | Msa1023400 | 0.802220 | 6.220062e-49 | -8.615850e-47 |
| Msa0410650 | Msa1023400 | 0.802324 | 5.922855e-49 | -8.615850e-47 |
| Msa0414950 | Msa1023400 | -0.806730 | 7.137681e-50 | -8.615850e-47 |
| Msa0419820 | Msa1023400 | 0.827557 | 1.464533e-54 | -8.615850e-47 |
| Msa0424920 | Msa1023400 | 0.825862 | 3.718935e-54 | -8.615850e-47 |
| Msa0425010 | Msa1023400 | 0.856747 | 2.610423e-62 | -8.615850e-47 |
| Msa0432770 | Msa1023400 | 0.829030 | 6.465891e-55 | -8.615850e-47 |
| Msa0436050 | Msa1023400 | 0.813090 | 3.051827e-51 | -8.615850e-47 |
| Msa0436500 | Msa1023400 | 0.808481 | 3.031761e-50 | -8.615850e-47 |
| Msa0442670 | Msa1023400 | 0.821006 | 5.078499e-53 | -8.615850e-47 |
| Msa0469030 | Msa1023400 | 0.804184 | 2.440539e-49 | -8.615850e-47 |
| Msa0475580 | Msa1023400 | 0.806639 | 7.459512e-50 | -8.615850e-47 |
| Msa0480000 | Msa1023400 | 0.805052 | 1.608093e-49 | -8.615850e-47 |
| Msa0480980 | Msa1023400 | 0.856875 | 2.392835e-62 | -8.615850e-47 |
| Msa0980500 | Msa1023400 | 0.810915 | 9.089592e-51 | -8.615850e-47 |
| Msa0981060 | Msa1023400 | 0.806411 | 8.332492e-50 | -8.615850e-47 |
| Msa1019020 | Msa1023400 | 0.809402 | 1.926214e-50 | -8.615850e-47 |
| Msa1023400 | Msa1036390 | 0.815952 | 7.101593e-52 | -8.615850e-47 |
| Msa1023400 | Msa1038050 | 0.805865 | 1.085833e-49 | -8.615850e-47 |
| Msa1023400 | Msa1040120 | 0.810944 | 8.961381e-51 | -8.615850e-47 |
| Msa1023400 | Msa1082500 | 0.804533 | 2.064104e-49 | -8.615850e-47 |
| Msa1023400 | Msa1085200 | 0.802744 | 4.850544e-49 | -8.615850e-47 |
| Msa1023400 | Msa1088090 | 0.805310 | 1.419595e-49 | -8.615850e-47 |
| Msa1023400 | Msa1104000 | 0.820487 | 6.683276e-53 | -8.615850e-47 |
| Msa1023400 | Msa1111630 | 0.805832 | 1.103525e-49 | -8.615850e-47 |
| Msa1023400 | Msa1116130 | -0.803500 | 3.384085e-49 | -8.615850e-47 |
| Msa1023400 | Msa1120530 | 0.808001 | 3.837713e-50 | -8.615850e-47 |
| Msa1023400 | Msa1139810 | 0.817718 | 2.852194e-52 | -8.615850e-47 |
| Msa1023400 | Msa1147570 | 0.811349 | 7.320628e-51 | -8.615850e-47 |
| Msa1023400 | Msa1151910 | 0.815709 | 8.045454e-52 | -8.615850e-47 |
| Msa1023400 | Msa1171870 | 0.803853 | 2.859095e-49 | -8.615850e-47 |
| Msa1023400 | Msa1200010 | 0.804240 | 2.374916e-49 | -8.615850e-47 |
| Msa1023400 | Msa1203250 | 0.823107 | 1.655380e-53 | -8.615850e-47 |
| Msa1023400 | Msa1209460 | 0.807273 | 5.478619e-50 | -8.615850e-47 |
| Msa1023400 | Msa1211150 | -0.809479 | 1.854581e-50 | -8.615850e-47 |
| Msa1023400 | Msa1214270 | 0.802222 | 6.216351e-49 | -8.615850e-47 |
| Msa1023400 | Msa1221560 | 0.822884 | 1.865442e-53 | -8.615850e-47 |
| Msa1023400 | Msa1222970 | 0.863138 | 3.083531e-64 | -8.615850e-47 |
| Msa1023400 | Msa1222990 | 0.804594 | 2.004195e-49 | -8.615850e-47 |
| Msa1023400 | Msa1228210 | 0.811062 | 8.449013e-51 | -8.615850e-47 |
| Msa1023400 | Msa1233890 | 0.800017 | 1.755432e-48 | -8.615850e-47 |
| Msa1023400 | Msa1238930 | 0.817541 | 3.125560e-52 | -8.615850e-47 |
| Msa1023400 | Msa1242220 | 0.820751 | 5.814263e-53 | -8.615850e-47 |
| Msa1023400 | Msa1242230 | 0.814504 | 1.489582e-51 | -8.615850e-47 |
| Msa1023400 | Msa1242240 | 0.826219 | 3.059411e-54 | -8.615850e-47 |
| Msa1023400 | Msa1252390 | 0.804174 | 2.451629e-49 | -8.615850e-47 |
| Msa1023400 | Msa1264020 | 0.862957 | 3.506016e-64 | -8.615850e-47 |
| Msa1023400 | Msa1267220 | 0.827320 | 1.669320e-54 | -8.615850e-47 |
| Msa1023400 | Msa1271280 | 0.835557 | 1.565535e-56 | -8.615850e-47 |
| Msa1023400 | Msa1271290 | 0.800859 | 1.182454e-48 | -8.615850e-47 |
| Msa1023400 | Msa1272900 | 0.808173 | 3.527139e-50 | -8.615850e-47 |
| Msa1023400 | Msa1283840 | 0.808212 | 3.460070e-50 | -8.615850e-47 |
| Msa1023400 | Msa1283860 | 0.824072 | 9.839424e-54 | -8.615850e-47 |
| Msa1023400 | Msa1284220 | 0.801130 | 1.041029e-48 | -8.615850e-47 |
| Msa1023400 | Msa1284260 | 0.819543 | 1.099230e-52 | -8.615850e-47 |
| Msa1023400 | Msa1306430 | 0.806733 | 7.127122e-50 | -8.615850e-47 |
| Msa1023400 | Msa1306690 | 0.802651 | 5.070216e-49 | -8.615850e-47 |
| Msa1023400 | Msa1308380 | 0.824428 | 8.116606e-54 | -8.615850e-47 |
| Msa1023400 | Msa1316780 | 0.808030 | 3.783137e-50 | -8.615850e-47 |
| Msa1023400 | Msa1316830 | 0.803759 | 2.989893e-49 | -8.615850e-47 |
| Msa1023400 | Msa1322860 | 0.808296 | 3.320305e-50 | -8.615850e-47 |
| Msa1023400 | Msa1322890 | 0.830375 | 3.043527e-55 | -8.615850e-47 |
| Msa1023400 | Msa1324780 | 0.817207 | 3.716215e-52 | -8.615850e-47 |
| Msa1023400 | Msa1327050 | 0.801616 | 8.277394e-49 | -8.615850e-47 |
| Msa1023400 | Msa1335860 | 0.801433 | 9.025113e-49 | -8.615850e-47 |
| Msa1023400 | Msa1357530 | 0.801874 | 7.328480e-49 | -8.615850e-47 |
| Msa1023400 | Msa1358960 | 0.803633 | 3.176649e-49 | -8.615850e-47 |
| Msa1023400 | Msa1367080 | 0.861252 | 1.169040e-63 | -8.615850e-47 |
| Msa1023400 | Msa1371430 | 0.831264 | 1.842341e-55 | -8.615850e-47 |
| Msa1023400 | Msa1378760 | 0.818699 | 1.710754e-52 | -8.615850e-47 |
| Msa1023400 | Msa1384350 | 0.803926 | 2.761297e-49 | -8.615850e-47 |
| Msa1023400 | Msa1392200 | 0.814104 | 1.825791e-51 | -8.615850e-47 |
| Msa1023400 | Msa1397810 | 0.808347 | 3.237995e-50 | -8.615850e-47 |
| Msa1023400 | Msa1411070 | 0.862352 | 5.386274e-64 | -8.615850e-47 |
| Msa1023400 | Msa1414740 | 0.804294 | 2.315043e-49 | -8.615850e-47 |
| Msa1023400 | Msa1415640 | 0.833207 | 6.089093e-56 | -8.615850e-47 |
| Msa1023400 | Msa1417870 | 0.836560 | 8.710043e-57 | -8.615850e-47 |
| Msa1023400 | Msa1419800 | -0.817493 | 3.205391e-52 | -8.615850e-47 |
| Msa1023400 | Msa1427660 | -0.806309 | 8.756321e-50 | -8.615850e-47 |
| Msa1023400 | Msa1427760 | 0.802499 | 5.450770e-49 | -8.615850e-47 |
| Msa1023400 | Msa1429150 | 0.808376 | 3.192252e-50 | -8.615850e-47 |
| Msa1023400 | Msa1457240 | 0.801073 | 1.069422e-48 | -8.615850e-47 |
| Msa1023400 | Msa1457440 | 0.841524 | 4.511416e-58 | -8.615850e-47 |
| Msa1023400 | Msa1464940 | 0.813121 | 3.004371e-51 | -8.615850e-47 |
| Msa1023400 | Msa1465310 | 0.811474 | 6.875818e-51 | -8.615850e-47 |
| Msa0243100 | Msa1023400 | 0.812689 | 3.735397e-51 | -8.615850e-47 |
| Msa0270270 | Msa1023400 | 0.813246 | 2.820211e-51 | -8.615850e-47 |
| Msa0272690 | Msa1023400 | 0.846947 | 1.576963e-59 | -8.615850e-47 |
| Msa0280900 | Msa1023400 | 0.819091 | 1.393055e-52 | -8.615850e-47 |
| Msa0283520 | Msa1023400 | 0.811999 | 5.285235e-51 | -8.615850e-47 |
| Msa0287650 | Msa1023400 | 0.813163 | 2.941864e-51 | -8.615850e-47 |
| Msa0295070 | Msa1023400 | 0.814223 | 1.718936e-51 | -8.615850e-47 |
| Msa0317250 | Msa1023400 | 0.805830 | 1.104512e-49 | -8.615850e-47 |
| Msa0318250 | Msa1023400 | 0.810516 | 1.108620e-50 | -8.615850e-47 |
| Msa0320100 | Msa1023400 | 0.833669 | 4.668664e-56 | -8.615850e-47 |
| Msa0332000 | Msa1023400 | 0.809574 | 1.768973e-50 | -8.615850e-47 |
| Msa0333720 | Msa1023400 | -0.816801 | 4.585165e-52 | -8.615850e-47 |
| Msa0334350 | Msa1023400 | 0.825345 | 4.932283e-54 | -8.615850e-47 |
| Msa0337330 | Msa1023400 | 0.816292 | 5.960585e-52 | -8.615850e-47 |
| Msa0342360 | Msa1023400 | 0.825904 | 3.635367e-54 | -8.615850e-47 |
| Msa0358170 | Msa1023400 | 0.821230 | 4.508932e-53 | -8.615850e-47 |
| Msa0362780 | Msa1023400 | 0.817053 | 4.026333e-52 | -8.615850e-47 |
| Msa0483860 | Msa1023400 | 0.815661 | 8.246567e-52 | -8.615850e-47 |
| Msa0488400 | Msa1023400 | 0.825012 | 5.912049e-54 | -8.615850e-47 |
| Msa0500360 | Msa1023400 | 0.829020 | 6.501170e-55 | -8.615850e-47 |
| Msa0503580 | Msa1023400 | 0.803668 | 3.123755e-49 | -8.615850e-47 |
| Msa0507680 | Msa1023400 | 0.817198 | 3.734471e-52 | -8.615850e-47 |
| Msa0509390 | Msa1023400 | 0.808090 | 3.673144e-50 | -8.615850e-47 |
| Msa0510970 | Msa1023400 | 0.803325 | 3.678940e-49 | -8.615850e-47 |
| Msa0515010 | Msa1023400 | 0.808771 | 2.629698e-50 | -8.615850e-47 |
| Msa0516320 | Msa1023400 | 0.857894 | 1.195481e-62 | -8.615850e-47 |
| Msa0519220 | Msa1023400 | 0.809045 | 2.296953e-50 | -8.615850e-47 |
| Msa0520070 | Msa1023400 | 0.823490 | 1.347088e-53 | -8.615850e-47 |
| Msa0532300 | Msa1023400 | 0.800535 | 1.377341e-48 | -8.615850e-47 |
| Msa0533070 | Msa1023400 | 0.819682 | 1.021588e-52 | -8.615850e-47 |
| Msa0540070 | Msa1023400 | 0.802378 | 5.772655e-49 | -8.615850e-47 |
| Msa0548170 | Msa1023400 | 0.804571 | 2.026644e-49 | -8.615850e-47 |
| Msa0578040 | Msa1023400 | 0.802616 | 5.155836e-49 | -8.615850e-47 |
| Msa0579290 | Msa1023400 | 0.812049 | 5.153597e-51 | -8.615850e-47 |
| Msa0579390 | Msa1023400 | 0.811367 | 7.255240e-51 | -8.615850e-47 |
| Msa0581760 | Msa1023400 | 0.856509 | 3.067205e-62 | -8.615850e-47 |
| Msa0584860 | Msa1023400 | 0.822310 | 2.537034e-53 | -8.615850e-47 |
| Msa0593650 | Msa1023400 | 0.822545 | 2.236468e-53 | -8.615850e-47 |
| Msa0599890 | Msa1023400 | 0.800364 | 1.492398e-48 | -8.615850e-47 |
| Msa0602240 | Msa1023400 | 0.807898 | 4.036338e-50 | -8.615850e-47 |
| Msa0602250 | Msa1023400 | 0.813563 | 2.402580e-51 | -8.615850e-47 |
| Msa0602310 | Msa1023400 | 0.829360 | 5.376769e-55 | -8.615850e-47 |
| Msa0844240 | Msa1023400 | 0.823930 | 1.062380e-53 | -8.615850e-47 |
| Msa0845590 | Msa1023400 | -0.814468 | 1.517121e-51 | -8.615850e-47 |
| Msa0850960 | Msa1023400 | 0.820838 | 5.552272e-53 | -8.615850e-47 |
| Msa0853540 | Msa1023400 | 0.856636 | 2.814480e-62 | -8.615850e-47 |
| Msa0871270 | Msa1023400 | 0.815855 | 7.463594e-52 | -8.615850e-47 |
| Msa0876200 | Msa1023400 | 0.810163 | 1.321531e-50 | -8.615850e-47 |
| Msa0878500 | Msa1023400 | 0.837037 | 6.584053e-57 | -8.615850e-47 |
| Msa0880140 | Msa1023400 | 0.828575 | 8.329979e-55 | -8.615850e-47 |
| Msa0880440 | Msa1023400 | 0.800841 | 1.192506e-48 | -8.615850e-47 |
| Msa0920870 | Msa1023400 | 0.818284 | 2.123518e-52 | -8.615850e-47 |
| Msa0936270 | Msa1023400 | 0.803923 | 2.764513e-49 | -8.615850e-47 |
| Msa0941750 | Msa1023400 | 0.806976 | 6.331141e-50 | -8.615850e-47 |
| Msa0944190 | Msa1023400 | 0.851161 | 1.062549e-60 | -8.615850e-47 |
| Msa0975340 | Msa1023400 | 0.808862 | 2.514261e-50 | -8.615850e-47 |
| Msa0979010 | Msa1023400 | 0.810893 | 9.189347e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023400 | MtrunA17_Chr7g0240961 | 97.447 | 235 | 6 | 0 | 1 | 235 | 1 | 235 | 6.49e-174 | 477 |
| Msa1023400 | MtrunA17_Chr5g0436201 | 57.310 | 171 | 68 | 4 | 66 | 234 | 44 | 211 | 6.55e-61 | 190 |
| Msa1023400 | MtrunA17_Chr3g0112791 | 55.696 | 158 | 58 | 5 | 79 | 230 | 62 | 213 | 6.00e-49 | 160 |
| Msa1023400 | MtrunA17_Chr4g0045171 | 41.135 | 141 | 58 | 4 | 108 | 232 | 167 | 298 | 3.67e-26 | 103 |
| Msa1023400 | MtrunA17_Chr2g0284111 | 37.410 | 139 | 64 | 3 | 108 | 232 | 153 | 282 | 4.93e-26 | 102 |
| Msa1023400 | MtrunA17_Chr8g0379191 | 41.135 | 141 | 58 | 4 | 108 | 232 | 178 | 309 | 9.60e-26 | 102 |
| Msa1023400 | MtrunA17_Chr3g0112811 | 48.276 | 87 | 36 | 2 | 76 | 157 | 41 | 123 | 3.87e-20 | 82.8 |
| Msa1023400 | MtrunA17_Chr3g0120281 | 43.038 | 79 | 38 | 2 | 91 | 169 | 223 | 294 | 1.78e-12 | 66.2 |
| Msa1023400 | MtrunA17_Chr4g0029221 | 42.683 | 82 | 41 | 2 | 108 | 189 | 272 | 347 | 6.10e-11 | 61.6 |
| Msa1023400 | MtrunA17_Chr1g0181371 | 40.000 | 90 | 43 | 2 | 80 | 169 | 236 | 314 | 8.81e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1023400 | AT5G05830.1 | 58.282 | 163 | 66 | 2 | 74 | 235 | 43 | 204 | 5.60e-63 | 196 |
| Msa1023400 | AT5G01070.1 | 55.385 | 130 | 55 | 2 | 108 | 234 | 75 | 204 | 1.77e-47 | 156 |
| Msa1023400 | AT2G37950.1 | 43.103 | 232 | 97 | 8 | 9 | 235 | 5 | 206 | 2.29e-47 | 155 |
| Msa1023400 | AT5G59000.1 | 41.558 | 154 | 55 | 2 | 110 | 232 | 80 | 229 | 1.62e-33 | 121 |
| Msa1023400 | AT2G34200.2 | 49.275 | 69 | 28 | 1 | 108 | 169 | 99 | 167 | 1.14e-14 | 70.9 |
| Msa1023400 | AT2G34200.1 | 49.275 | 69 | 28 | 1 | 108 | 169 | 99 | 167 | 1.14e-14 | 70.9 |
| Msa1023400 | AT5G60580.4 | 44.000 | 75 | 31 | 2 | 95 | 169 | 248 | 311 | 2.32e-12 | 66.2 |
| Msa1023400 | AT5G60580.2 | 44.000 | 75 | 31 | 2 | 95 | 169 | 248 | 311 | 2.32e-12 | 66.2 |
| Msa1023400 | AT5G60580.1 | 44.000 | 75 | 31 | 2 | 95 | 169 | 248 | 311 | 2.44e-12 | 66.2 |
| Msa1023400 | AT5G60580.3 | 44.000 | 75 | 31 | 2 | 95 | 169 | 248 | 311 | 2.44e-12 | 66.2 |
| Msa1023400 | AT2G45530.1 | 42.308 | 78 | 36 | 2 | 98 | 172 | 58 | 129 | 7.22e-12 | 63.5 |
Find 75 sgRNAs with CRISPR-Local
Find 216 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAGCAGAAACTCAAAGATTT+TGG | 0.194327 | 7_1:-51049128 | Msa1023400:CDS |
| GTTCCAAAAGATTCAAGTTT+TGG | 0.208537 | 7_1:+51052359 | None:intergenic |
| GTTCCAAAACTTGAATCTTT+TGG | 0.216581 | 7_1:-51052362 | Msa1023400:five_prime_UTR |
| CTTGGTTGTGTTCATGATTC+TGG | 0.222485 | 7_1:-51051915 | Msa1023400:CDS |
| TGAGGCTTGGTTCAAGATTA+AGG | 0.225345 | 7_1:-51051685 | Msa1023400:CDS |
| AATGAAGTTTCCAAGGAAAT+AGG | 0.233953 | 7_1:-51048916 | Msa1023400:three_prime_UTR |
| TCATGAAATTACATTGATTC+TGG | 0.244019 | 7_1:+51048780 | None:intergenic |
| ATCTGGTCCTCCTATTGAAT+TGG | 0.286034 | 7_1:-51051754 | Msa1023400:CDS |
| AAGATGATGGCACATTAAAA+TGG | 0.290623 | 7_1:+51049037 | None:intergenic |
| ATATCTTCTACTTTACCTTA+TGG | 0.302350 | 7_1:+51052628 | None:intergenic |
| TTTGTGAAGCTAAATAATTT+AGG | 0.345758 | 7_1:+51048810 | None:intergenic |
| CAAGAACAACCCAATTCAAT+AGG | 0.348363 | 7_1:+51051744 | None:intergenic |
| GGTTCAAGATTAAGGGAAAT+AGG | 0.353493 | 7_1:-51051677 | Msa1023400:intron |
| AGATTGTAGGATTTGTCATA+TGG | 0.356897 | 7_1:-51051799 | Msa1023400:CDS |
| TCCTGAGAATAAGGTGCATT+TGG | 0.360694 | 7_1:-51051835 | Msa1023400:CDS |
| CAGCACGTTTCTGTTCTTGT+TGG | 0.364089 | 7_1:-51052480 | Msa1023400:five_prime_UTR |
| AGATGACATTGCATTGATAA+AGG | 0.370904 | 7_1:+51052529 | None:intergenic |
| TGAGAGGGTTCCTGAGAATA+AGG | 0.371677 | 7_1:-51051844 | Msa1023400:CDS |
| TAGGATTTGTCATATGGGTT+TGG | 0.384351 | 7_1:-51051793 | Msa1023400:CDS |
| CAATAGGAGGACCAGATTCA+TGG | 0.395797 | 7_1:+51051760 | None:intergenic |
| GATTCAATAATGCCTCAATA+AGG | 0.404537 | 7_1:+51048860 | None:intergenic |
| TCTCATTTCTATTCAACAAA+TGG | 0.408341 | 7_1:-51051987 | Msa1023400:CDS |
| TCTGGTCCTCCTATTGAATT+GGG | 0.412790 | 7_1:-51051753 | Msa1023400:CDS |
| TCCTTGAAAACCTATTTCCT+TGG | 0.416724 | 7_1:+51048906 | None:intergenic |
| GACCTGTGAAATTTGTCATT+CGG | 0.423919 | 7_1:-51049250 | Msa1023400:CDS |
| GAGGCTTGGTTCAAGATTAA+GGG | 0.426945 | 7_1:-51051684 | Msa1023400:CDS |
| ATGCACATTTGAAGTTATCA+AGG | 0.428602 | 7_1:-51048996 | Msa1023400:three_prime_UTR |
| GCCAAATGCACCTTATTCTC+AGG | 0.430925 | 7_1:+51051834 | None:intergenic |
| TGTGTTTCTGATCCTGAACT+TGG | 0.432214 | 7_1:-51051933 | Msa1023400:CDS |
| ATAAGGCCTCAAATTGTAGA+AGG | 0.432995 | 7_1:+51048877 | None:intergenic |
| CTAAAGTGGAGAAAGATTGT+AGG | 0.439305 | 7_1:-51051812 | Msa1023400:CDS |
| ATGAATCCTTCTACAATTTG+AGG | 0.442586 | 7_1:-51048883 | Msa1023400:three_prime_UTR |
| TCATGAACACAACCAAGTTC+AGG | 0.444890 | 7_1:+51051921 | None:intergenic |
| GAAAGTGAAAGCCATGAATC+TGG | 0.447748 | 7_1:-51051771 | Msa1023400:CDS |
| GATAAAGGAGTGAGGTATCA+AGG | 0.454168 | 7_1:+51052544 | None:intergenic |
| AACAAGCCAAAGAGGCAGAA+AGG | 0.455114 | 7_1:-51048969 | Msa1023400:three_prime_UTR |
| TAAGGTGCATTTGGCTAAAG+TGG | 0.460342 | 7_1:-51051826 | Msa1023400:CDS |
| ACAAGCCAAAGAGGCAGAAA+GGG | 0.465952 | 7_1:-51048968 | Msa1023400:three_prime_UTR |
| TTTCATGACAAGTACTAGAA+TGG | 0.467391 | 7_1:-51048765 | Msa1023400:three_prime_UTR |
| GATTGTAGGATTTGTCATAT+GGG | 0.475377 | 7_1:-51051798 | Msa1023400:CDS |
| GAGTGAGGTATCAAGGGAAA+AGG | 0.475557 | 7_1:+51052551 | None:intergenic |
| ACATATTTATGATTACCATA+AGG | 0.475768 | 7_1:-51052643 | Msa1023400:five_prime_UTR |
| ATAAGAATTGTGCTGAGGCT+TGG | 0.477654 | 7_1:-51051698 | Msa1023400:CDS |
| ATTGGGTTGTTCTTGTAAAG+AGG | 0.483277 | 7_1:-51051736 | Msa1023400:CDS |
| TGTTTCTCTGATGCTGATGA+TGG | 0.485969 | 7_1:-51052023 | Msa1023400:CDS |
| TGAAGTGTTGTTGTGGAAGA+AGG | 0.490621 | 7_1:+51052440 | None:intergenic |
| AATCTTTGAGTTTCTGCTGT+AGG | 0.499579 | 7_1:+51049132 | None:intergenic |
| TACAATTTGAGGCCTTATTG+AGG | 0.515568 | 7_1:-51048872 | Msa1023400:three_prime_UTR |
| CATGAATGAACCTAAGATGA+TGG | 0.517591 | 7_1:+51049024 | None:intergenic |
| TGCTCTGTTAAATCCTCAGT+TGG | 0.521766 | 7_1:+51049207 | None:intergenic |
| GGAAGTGATGTGAGTGGTGA+AGG | 0.523478 | 7_1:-51052053 | Msa1023400:CDS |
| AAATTTGTCATTCGGTTGCA+CGG | 0.534266 | 7_1:-51049242 | Msa1023400:CDS |
| CATTTCTATTCAACAAATGG+TGG | 0.536769 | 7_1:-51051984 | Msa1023400:CDS |
| TTGAGTTTCTGCTGTAGGAA+CGG | 0.539694 | 7_1:+51049137 | None:intergenic |
| GATATTAAATTACTATGATG+AGG | 0.546510 | 7_1:-51052610 | Msa1023400:five_prime_UTR |
| CATCGCCATCATCATCATCA+TGG | 0.559254 | 7_1:-51052074 | Msa1023400:CDS |
| GAAAGAGTGAAGTGTTGTTG+TGG | 0.561110 | 7_1:+51052433 | None:intergenic |
| TTCTCTGATGCTGATGATGG+TGG | 0.564328 | 7_1:-51052020 | Msa1023400:CDS |
| TTCTTGCTCTAAATCAACAT+GGG | 0.569299 | 7_1:+51052106 | None:intergenic |
| ATAAAGGAGTGAGGTATCAA+GGG | 0.577519 | 7_1:+51052545 | None:intergenic |
| CACTTCCATGATGATGATGA+TGG | 0.583804 | 7_1:+51052069 | None:intergenic |
| TGTTGAAATTAGAATTGAGA+GGG | 0.584516 | 7_1:-51051859 | Msa1023400:CDS |
| TTTCTTGCTCTAAATCAACA+TGG | 0.586335 | 7_1:+51052105 | None:intergenic |
| AACCGAATGACAAATTTCAC+AGG | 0.595759 | 7_1:+51049248 | None:intergenic |
| ATATTAAATTACTATGATGA+GGG | 0.599335 | 7_1:-51052609 | Msa1023400:five_prime_UTR |
| GCAGAAAATTCAAGAAGCGA+TGG | 0.606538 | 7_1:+51049100 | None:intergenic |
| GAACAACCCAATTCAATAGG+AGG | 0.608273 | 7_1:+51051747 | None:intergenic |
| AAGGAGCAAACAAGCCAAAG+AGG | 0.609807 | 7_1:-51048977 | Msa1023400:three_prime_UTR |
| ATGTTGAAATTAGAATTGAG+AGG | 0.635607 | 7_1:-51051860 | Msa1023400:CDS |
| AGGAACGGCTGTTGAGAGTG+TGG | 0.663691 | 7_1:+51049152 | None:intergenic |
| TGCTCATAAGAATTGTGCTG+AGG | 0.667065 | 7_1:-51051703 | Msa1023400:CDS |
| GAACGTTTACAGTCCAACTG+AGG | 0.687053 | 7_1:-51049220 | Msa1023400:CDS |
| TGTTGAGAGTGTGGATGATG+CGG | 0.696838 | 7_1:+51049161 | None:intergenic |
| ATTGCATTGATAAAGGAGTG+AGG | 0.699482 | 7_1:+51052536 | None:intergenic |
| CATCATGGAAGTGATGTGAG+TGG | 0.748585 | 7_1:-51052059 | Msa1023400:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAAAAAAAAAAAACA+GGG | + | chr7_1:51049232-51049251 | None:intergenic | 10.0% |
| !! | AAGATTAAATAATTTAAAGA+AGG | - | chr7_1:51050287-51050306 | Msa1023400:intron | 10.0% |
| !! | TCTTAAATTAATAGATTATT+TGG | + | chr7_1:51050593-51050612 | None:intergenic | 10.0% |
| !! | ATATTAAATTACTATGATGA+GGG | - | chr7_1:51048779-51048798 | Msa1023400:three_prime_UTR | 15.0% |
| !! | GAAAAGGAAAAAAAAAAATT+AGG | + | chr7_1:51048824-51048843 | None:intergenic | 15.0% |
| !! | GAAACAAAAAAAAAAAAAAC+AGG | + | chr7_1:51049233-51049252 | None:intergenic | 15.0% |
| !!! | AATTATTTCTTCAAGAAAAA+GGG | - | chr7_1:51050253-51050272 | Msa1023400:intron | 15.0% |
| !! | ATTCATGTATATAAATATCT+TGG | - | chr7_1:51050502-51050521 | Msa1023400:intron | 15.0% |
| !! | AAGGATTGAAATTAAAATTA+AGG | + | chr7_1:51050956-51050975 | None:intergenic | 15.0% |
| !!! | GCTAAATTATAAACTTTTAA+TGG | - | chr7_1:51051182-51051201 | Msa1023400:intron | 15.0% |
| !!! | TCTGTGTTTAAATTTTTTAT+AGG | - | chr7_1:51052116-51052135 | Msa1023400:CDS | 15.0% |
| !! | ACATATTTATGATTACCATA+AGG | - | chr7_1:51048745-51048764 | Msa1023400:three_prime_UTR | 20.0% |
| !! | GATATTAAATTACTATGATG+AGG | - | chr7_1:51048778-51048797 | Msa1023400:three_prime_UTR | 20.0% |
| !! | AAAAATGTCAAATTTGCAAA+TGG | - | chr7_1:51049259-51049278 | Msa1023400:intron | 20.0% |
| !! | CAAAACTAAAAGAAAAACAA+GGG | + | chr7_1:51049752-51049771 | None:intergenic | 20.0% |
| !! | TCAAAACTAAAAGAAAAACA+AGG | + | chr7_1:51049753-51049772 | None:intergenic | 20.0% |
| !! | GAAATCAATTATTATCTATG+AGG | - | chr7_1:51049935-51049954 | Msa1023400:intron | 20.0% |
| !!! | GATGATGAAAAAAAAGTATT+TGG | - | chr7_1:51050181-51050200 | Msa1023400:intron | 20.0% |
| !!! | CAATTATTTCTTCAAGAAAA+AGG | - | chr7_1:51050252-51050271 | Msa1023400:intron | 20.0% |
| !!! | ATTATTTCTTCAAGAAAAAG+GGG | - | chr7_1:51050254-51050273 | Msa1023400:intron | 20.0% |
| !! | AAATAATTTAAAGAAGGTGA+TGG | - | chr7_1:51050293-51050312 | Msa1023400:intron | 20.0% |
| !!! | ATGGATTAAAATATTCTATG+TGG | + | chr7_1:51050553-51050572 | None:intergenic | 20.0% |
| !! | TAATCCATATAATAAATCAC+TGG | - | chr7_1:51050565-51050584 | Msa1023400:intron | 20.0% |
| !! | TGATTACAGTCAATTATTAT+CGG | - | chr7_1:51050682-51050701 | Msa1023400:intron | 20.0% |
| !! | TATATCTATACTTTATGTAC+TGG | - | chr7_1:51050865-51050884 | Msa1023400:intron | 20.0% |
| !!! | ATAGTTTATTATTGATTGAC+TGG | - | chr7_1:51051037-51051056 | Msa1023400:intron | 20.0% |
| !!! | AATTTGAATCTTATCAGTTT+TGG | - | chr7_1:51051210-51051229 | Msa1023400:intron | 20.0% |
| !! | CGATATTAAAGAATCTAATA+TGG | + | chr7_1:51051588-51051607 | None:intergenic | 20.0% |
| !! | TGTATATAGAGTTTCAAATT+AGG | - | chr7_1:51051675-51051694 | Msa1023400:intron | 20.0% |
| !!! | ATTATATATGAAGTGGTTTT+GGG | - | chr7_1:51052064-51052083 | Msa1023400:CDS | 20.0% |
| !! | TTTGTGAAGCTAAATAATTT+AGG | + | chr7_1:51052581-51052600 | None:intergenic | 20.0% |
| ! | ATATCTTCTACTTTACCTTA+TGG | + | chr7_1:51048763-51048782 | None:intergenic | 25.0% |
| !! | AATGATTTTGTTACTATGGT+GGG | + | chr7_1:51049000-51049019 | None:intergenic | 25.0% |
| !! | GTTGAATGATTTTGTTACTA+TGG | + | chr7_1:51049004-51049023 | None:intergenic | 25.0% |
| !!! | TTTTGGAACTTTGCTTTAAT+GGG | - | chr7_1:51049043-51049062 | Msa1023400:CDS | 25.0% |
| ! | TCTCATTTCTATTCAACAAA+TGG | - | chr7_1:51049401-51049420 | Msa1023400:intron | 25.0% |
| ! | ATGTTGAAATTAGAATTGAG+AGG | - | chr7_1:51049528-51049547 | Msa1023400:intron | 25.0% |
| ! | TGTTGAAATTAGAATTGAGA+GGG | - | chr7_1:51049529-51049548 | Msa1023400:intron | 25.0% |
| ! | AATGCCATTAATCAACAAAA+GGG | + | chr7_1:51049831-51049850 | None:intergenic | 25.0% |
| ! | ATTATCTAGATGATGATAGA+AGG | - | chr7_1:51049878-51049897 | Msa1023400:intron | 25.0% |
| !!! | TTTGTGGTTTTATGTTTACT+TGG | - | chr7_1:51049912-51049931 | Msa1023400:intron | 25.0% |
| !!! | TTGTGGTTTTATGTTTACTT+GGG | - | chr7_1:51049913-51049932 | Msa1023400:intron | 25.0% |
| ! | TTCGTAATAATTTGAGAATG+TGG | - | chr7_1:51049995-51050014 | Msa1023400:intron | 25.0% |
| ! | ATTGATTGAAGTTCTGTAAT+TGG | - | chr7_1:51050115-51050134 | Msa1023400:intron | 25.0% |
| !!! | TTCTTCCTTTTCTGAAATTT+AGG | - | chr7_1:51050393-51050412 | Msa1023400:intron | 25.0% |
| ! | AGATTCCTAAATTTCAGAAA+AGG | + | chr7_1:51050401-51050420 | None:intergenic | 25.0% |
| ! | CATGTATATAAATATCTTGG+TGG | - | chr7_1:51050505-51050524 | Msa1023400:intron | 25.0% |
| ! | GTATTCAATTTCAGACTTTA+AGG | + | chr7_1:51050975-51050994 | None:intergenic | 25.0% |
| !! | TGCTTTTGTTAATACTTGAA+TGG | - | chr7_1:51051012-51051031 | Msa1023400:intron | 25.0% |
| ! | TCTTTATTGTATGTTGTGAT+TGG | - | chr7_1:51051238-51051257 | Msa1023400:intron | 25.0% |
| !!! | TATCTTCTTTTCCTTTGTTT+TGG | - | chr7_1:51051290-51051309 | Msa1023400:intron | 25.0% |
| ! | GTTTCAATATTCCAAAACAA+AGG | + | chr7_1:51051304-51051323 | None:intergenic | 25.0% |
| ! | AACAGTTGTGAATTTGTAAT+AGG | - | chr7_1:51051344-51051363 | Msa1023400:intron | 25.0% |
| ! | TAAAGAATCTAATATGGAGT+TGG | + | chr7_1:51051582-51051601 | None:intergenic | 25.0% |
| ! | TCAAAAATAGATAAAGTTCC+AGG | + | chr7_1:51051623-51051642 | None:intergenic | 25.0% |
| !!! | CTATTTTTGATATAGAGCTT+TGG | - | chr7_1:51051633-51051652 | Msa1023400:intron | 25.0% |
| ! | TAAACCGTTATGTTAATGTA+TGG | - | chr7_1:51051738-51051757 | Msa1023400:CDS | 25.0% |
| ! | TGAACCATACATTAACATAA+CGG | + | chr7_1:51051745-51051764 | None:intergenic | 25.0% |
| ! | TCATCATCATCATACATTAA+GGG | + | chr7_1:51052042-51052061 | None:intergenic | 25.0% |
| ! | ATCATCATCATCATACATTA+AGG | + | chr7_1:51052043-51052062 | None:intergenic | 25.0% |
| ! | GATGATGATTATATATGAAG+TGG | - | chr7_1:51052057-51052076 | Msa1023400:CDS | 25.0% |
| !! | GATTATATATGAAGTGGTTT+TGG | - | chr7_1:51052063-51052082 | Msa1023400:CDS | 25.0% |
| !!! | TTATATATGAAGTGGTTTTG+GGG | - | chr7_1:51052065-51052084 | Msa1023400:CDS | 25.0% |
| ! | AAAAAAGAATGAAGTTTCCA+AGG | - | chr7_1:51052465-51052484 | Msa1023400:five_prime_UTR | 25.0% |
| !!! | TCATGAAATTACATTGATTC+TGG | + | chr7_1:51052611-51052630 | None:intergenic | 25.0% |
| ! | AGATGACATTGCATTGATAA+AGG | + | chr7_1:51048862-51048881 | None:intergenic | 30.0% |
| ! | ATGATTTTGTTACTATGGTG+GGG | + | chr7_1:51048999-51049018 | None:intergenic | 30.0% |
| ! | GAATGATTTTGTTACTATGG+TGG | + | chr7_1:51049001-51049020 | None:intergenic | 30.0% |
| !!! | AAAGATTCAAGTTTTGGAAC+AGG | + | chr7_1:51049026-51049045 | None:intergenic | 30.0% |
| ! | GTTCCAAAACTTGAATCTTT+TGG | - | chr7_1:51049026-51049045 | Msa1023400:exon | 30.0% |
| !! | GTTCCAAAAGATTCAAGTTT+TGG | + | chr7_1:51049032-51049051 | None:intergenic | 30.0% |
| !!! | CTTTTGGAACTTTGCTTTAA+TGG | - | chr7_1:51049042-51049061 | Msa1023400:CDS | 30.0% |
| CAGTTAGAAAAAACTGGATT+AGG | + | chr7_1:51049086-51049105 | None:intergenic | 30.0% | |
| ATGAAGCAGTTAGAAAAAAC+TGG | + | chr7_1:51049092-51049111 | None:intergenic | 30.0% | |
| ! | TTCTTGCTCTAAATCAACAT+GGG | + | chr7_1:51049285-51049304 | None:intergenic | 30.0% |
| ! | TTTCTTGCTCTAAATCAACA+TGG | + | chr7_1:51049286-51049305 | None:intergenic | 30.0% |
| CATTTCTATTCAACAAATGG+TGG | - | chr7_1:51049404-51049423 | Msa1023400:intron | 30.0% | |
| AGATTGTAGGATTTGTCATA+TGG | - | chr7_1:51049589-51049608 | Msa1023400:intron | 30.0% | |
| GATTGTAGGATTTGTCATAT+GGG | - | chr7_1:51049590-51049609 | Msa1023400:intron | 30.0% | |
| CAATGCCATTAATCAACAAA+AGG | + | chr7_1:51049832-51049851 | None:intergenic | 30.0% | |
| ! | AAGTTCTGTAATTGGTGATA+TGG | - | chr7_1:51050123-51050142 | Msa1023400:intron | 30.0% |
| GTTAAGAGAACAAAATTGCA+AGG | - | chr7_1:51050220-51050239 | Msa1023400:intron | 30.0% | |
| !! | AGAAGGTGATGGAAAAATAA+AGG | - | chr7_1:51050304-51050323 | Msa1023400:intron | 30.0% |
| GGAACCAGTGATTTATTATA+TGG | + | chr7_1:51050572-51050591 | None:intergenic | 30.0% | |
| TTTGAATTGACAAAGAAGCA+AGG | + | chr7_1:51051071-51051090 | None:intergenic | 30.0% | |
| ! | ATTCAAAAGCAGCATTTTGT+TGG | - | chr7_1:51051084-51051103 | Msa1023400:intron | 30.0% |
| ! | TTCAAAAGCAGCATTTTGTT+GGG | - | chr7_1:51051085-51051104 | Msa1023400:intron | 30.0% |
| AATGAAATAATGCACTTGGA+TGG | + | chr7_1:51051162-51051181 | None:intergenic | 30.0% | |
| TAGCAATGAAATAATGCACT+TGG | + | chr7_1:51051166-51051185 | None:intergenic | 30.0% | |
| AGAGTTTCAAATTAGGCTAA+TGG | - | chr7_1:51051682-51051701 | Msa1023400:CDS | 30.0% | |
| TTTCAAATTAGGCTAATGGA+TGG | - | chr7_1:51051686-51051705 | Msa1023400:CDS | 30.0% | |
| GACGAACGAACTAAAAAATA+TGG | + | chr7_1:51051946-51051965 | None:intergenic | 30.0% | |
| !!! | TATATATGAAGTGGTTTTGG+GGG | - | chr7_1:51052066-51052085 | Msa1023400:CDS | 30.0% |
| ! | TTTTTGCGTTTGTCATATCA+TGG | - | chr7_1:51052323-51052342 | Msa1023400:five_prime_UTR | 30.0% |
| ! | AAGATGATGGCACATTAAAA+TGG | + | chr7_1:51052354-51052373 | None:intergenic | 30.0% |
| ! | TTTTAATGTGCCATCATCTT+AGG | - | chr7_1:51052354-51052373 | Msa1023400:five_prime_UTR | 30.0% |
| ! | ATGCACATTTGAAGTTATCA+AGG | - | chr7_1:51052392-51052411 | Msa1023400:five_prime_UTR | 30.0% |
| AATGAAGTTTCCAAGGAAAT+AGG | - | chr7_1:51052472-51052491 | Msa1023400:five_prime_UTR | 30.0% | |
| ATGAATCCTTCTACAATTTG+AGG | - | chr7_1:51052505-51052524 | Msa1023400:five_prime_UTR | 30.0% | |
| GATTCAATAATGCCTCAATA+AGG | + | chr7_1:51052531-51052550 | None:intergenic | 30.0% | |
| TTTCATGACAAGTACTAGAA+TGG | - | chr7_1:51052623-51052642 | Msa1023400:five_prime_UTR | 30.0% | |
| ! | ATAAAGGAGTGAGGTATCAA+GGG | + | chr7_1:51048846-51048865 | None:intergenic | 35.0% |
| ! | ATTGCATTGATAAAGGAGTG+AGG | + | chr7_1:51048855-51048874 | None:intergenic | 35.0% |
| CTAAAGTGGAGAAAGATTGT+AGG | - | chr7_1:51049576-51049595 | Msa1023400:intron | 35.0% | |
| TAGGATTTGTCATATGGGTT+TGG | - | chr7_1:51049595-51049614 | Msa1023400:intron | 35.0% | |
| CAAGAACAACCCAATTCAAT+AGG | + | chr7_1:51049647-51049666 | None:intergenic | 35.0% | |
| ! | ATTGGGTTGTTCTTGTAAAG+AGG | - | chr7_1:51049652-51049671 | Msa1023400:intron | 35.0% |
| GGTTCAAGATTAAGGGAAAT+AGG | - | chr7_1:51049711-51049730 | Msa1023400:intron | 35.0% | |
| !! | GACACCCTTTTGTTGATTAA+TGG | - | chr7_1:51049824-51049843 | Msa1023400:intron | 35.0% |
| GAAGGACTCACAATTATTTG+TGG | - | chr7_1:51049896-51049915 | Msa1023400:intron | 35.0% | |
| ! | ACGACTTAGATCTGAAATGT+CGG | - | chr7_1:51050066-51050085 | Msa1023400:intron | 35.0% |
| TACATGAATAGCAGTCAGAA+GGG | + | chr7_1:51050491-51050510 | None:intergenic | 35.0% | |
| ATACATGAATAGCAGTCAGA+AGG | + | chr7_1:51050492-51050511 | None:intergenic | 35.0% | |
| TTGACTGTAATCATATGTGC+CGG | + | chr7_1:51050675-51050694 | None:intergenic | 35.0% | |
| TTTGTGTCCAGTGTTTGTAT+CGG | - | chr7_1:51050720-51050739 | Msa1023400:intron | 35.0% | |
| AAAGAACAGCAACAAGAATC+TGG | + | chr7_1:51050836-51050855 | None:intergenic | 35.0% | |
| ! | ATTCTTGTTGCTGTTCTTTG+AGG | - | chr7_1:51050837-51050856 | Msa1023400:intron | 35.0% |
| ! | CATCTATGACTTTTACACAG+TGG | - | chr7_1:51050918-51050937 | Msa1023400:intron | 35.0% |
| ! | TCAAAAGCAGCATTTTGTTG+GGG | - | chr7_1:51051086-51051105 | Msa1023400:intron | 35.0% |
| GAATTATTTGCCACCAATGA+AGG | + | chr7_1:51051266-51051285 | None:intergenic | 35.0% | |
| GGAATATTGAAACCACTGAA+TGG | - | chr7_1:51051311-51051330 | Msa1023400:intron | 35.0% | |
| ! | TTTTTGTGCAAACCATTCAG+TGG | + | chr7_1:51051326-51051345 | None:intergenic | 35.0% |
| ! | CTTTACAAAACCAGCTTTGA+AGG | - | chr7_1:51051410-51051429 | Msa1023400:intron | 35.0% |
| !! | GAGTTGGAACTTATTGATTC+AGG | + | chr7_1:51051566-51051585 | None:intergenic | 35.0% |
| ! | ACATCATTAGTGTTGAACAG+TGG | + | chr7_1:51051825-51051844 | None:intergenic | 35.0% |
| TATGATCAGTGAACCAAATG+TGG | + | chr7_1:51052016-51052035 | None:intergenic | 35.0% | |
| GACCTGTGAAATTTGTCATT+CGG | - | chr7_1:51052138-51052157 | Msa1023400:exon | 35.0% | |
| AACCGAATGACAAATTTCAC+AGG | + | chr7_1:51052143-51052162 | None:intergenic | 35.0% | |
| AAATTTGTCATTCGGTTGCA+CGG | - | chr7_1:51052146-51052165 | Msa1023400:exon | 35.0% | |
| ! | AATCTTTGAGTTTCTGCTGT+AGG | + | chr7_1:51052259-51052278 | None:intergenic | 35.0% |
| ! | CAGCAGAAACTCAAAGATTT+TGG | - | chr7_1:51052260-51052279 | Msa1023400:five_prime_UTR | 35.0% |
| !! | GAAACTCAAAGATTTTGGCA+TGG | - | chr7_1:51052265-51052284 | Msa1023400:five_prime_UTR | 35.0% |
| !! | GAATTTTCTGCTAGCTTGTA+TGG | - | chr7_1:51052300-51052319 | Msa1023400:five_prime_UTR | 35.0% |
| CATGAATGAACCTAAGATGA+TGG | + | chr7_1:51052367-51052386 | None:intergenic | 35.0% | |
| ! | TCCAAGGAAATAGGTTTTCA+AGG | - | chr7_1:51052481-51052500 | Msa1023400:five_prime_UTR | 35.0% |
| TCCTTGAAAACCTATTTCCT+TGG | + | chr7_1:51052485-51052504 | None:intergenic | 35.0% | |
| ATAAGGCCTCAAATTGTAGA+AGG | + | chr7_1:51052514-51052533 | None:intergenic | 35.0% | |
| !! | TACAATTTGAGGCCTTATTG+AGG | - | chr7_1:51052516-51052535 | Msa1023400:five_prime_UTR | 35.0% |
| ! | GTGACTCAATCAGTGTTTTT+AGG | - | chr7_1:51052683-51052702 | Msa1023400:five_prime_UTR | 35.0% |
| !!! | AATCAGTGTTTTTAGGTGCA+TGG | - | chr7_1:51052690-51052709 | Msa1023400:five_prime_UTR | 35.0% |
| ! | GATAAAGGAGTGAGGTATCA+AGG | + | chr7_1:51048847-51048866 | None:intergenic | 40.0% |
| !! | TGAAGTGTTGTTGTGGAAGA+AGG | + | chr7_1:51048951-51048970 | None:intergenic | 40.0% |
| !! | GAAAGAGTGAAGTGTTGTTG+TGG | + | chr7_1:51048958-51048977 | None:intergenic | 40.0% |
| ! | CACTTCCATGATGATGATGA+TGG | + | chr7_1:51049322-51049341 | None:intergenic | 40.0% |
| TGTTTCTCTGATGCTGATGA+TGG | - | chr7_1:51049365-51049384 | Msa1023400:intron | 40.0% | |
| ! | TGTGTTTCTGATCCTGAACT+TGG | - | chr7_1:51049455-51049474 | Msa1023400:intron | 40.0% |
| TCATGAACACAACCAAGTTC+AGG | + | chr7_1:51049470-51049489 | None:intergenic | 40.0% | |
| CTTGGTTGTGTTCATGATTC+TGG | - | chr7_1:51049473-51049492 | Msa1023400:intron | 40.0% | |
| TCCTGAGAATAAGGTGCATT+TGG | - | chr7_1:51049553-51049572 | Msa1023400:intron | 40.0% | |
| TAAGGTGCATTTGGCTAAAG+TGG | - | chr7_1:51049562-51049581 | Msa1023400:intron | 40.0% | |
| GAAAGTGAAAGCCATGAATC+TGG | - | chr7_1:51049617-51049636 | Msa1023400:intron | 40.0% | |
| ATCTGGTCCTCCTATTGAAT+TGG | - | chr7_1:51049634-51049653 | Msa1023400:intron | 40.0% | |
| TCTGGTCCTCCTATTGAATT+GGG | - | chr7_1:51049635-51049654 | Msa1023400:intron | 40.0% | |
| GAACAACCCAATTCAATAGG+AGG | + | chr7_1:51049644-51049663 | None:intergenic | 40.0% | |
| TGCTCATAAGAATTGTGCTG+AGG | - | chr7_1:51049685-51049704 | Msa1023400:intron | 40.0% | |
| ATAAGAATTGTGCTGAGGCT+TGG | - | chr7_1:51049690-51049709 | Msa1023400:intron | 40.0% | |
| ! | TGAGGCTTGGTTCAAGATTA+AGG | - | chr7_1:51049703-51049722 | Msa1023400:intron | 40.0% |
| ! | GAGGCTTGGTTCAAGATTAA+GGG | - | chr7_1:51049704-51049723 | Msa1023400:intron | 40.0% |
| !! | AAACACGACACTGACTCATA+TGG | + | chr7_1:51050037-51050056 | None:intergenic | 40.0% |
| ACATGAATAGCAGTCAGAAG+GGG | + | chr7_1:51050490-51050509 | None:intergenic | 40.0% | |
| ATGCCTTTGATCATAAGGGT+TGG | + | chr7_1:51050639-51050658 | None:intergenic | 40.0% | |
| GCACATGCCTTTGATCATAA+GGG | + | chr7_1:51050643-51050662 | None:intergenic | 40.0% | |
| TGAAACACCGATACAAACAC+TGG | + | chr7_1:51050730-51050749 | None:intergenic | 40.0% | |
| ACAGATCCTTCCTCAACAAA+AGG | + | chr7_1:51051112-51051131 | None:intergenic | 40.0% | |
| ! | TTTTGTTGAGGAAGGATCTG+TGG | - | chr7_1:51051111-51051130 | Msa1023400:intron | 40.0% |
| GTTGTGATTGGTACCTTCAT+TGG | - | chr7_1:51051250-51051269 | Msa1023400:intron | 40.0% | |
| CTAGGTGTGATGAGGTATAT+TGG | + | chr7_1:51051505-51051524 | None:intergenic | 40.0% | |
| GTGTCTGTAACATCCACATT+TGG | - | chr7_1:51052000-51052019 | Msa1023400:CDS | 40.0% | |
| TGCTCTGTTAAATCCTCAGT+TGG | + | chr7_1:51052184-51052203 | None:intergenic | 40.0% | |
| TTGAGTTTCTGCTGTAGGAA+CGG | + | chr7_1:51052254-51052273 | None:intergenic | 40.0% | |
| GCAGAAAATTCAAGAAGCGA+TGG | + | chr7_1:51052291-51052310 | None:intergenic | 40.0% | |
| ! | TTTTTCCCTTTCTGCCTCTT+TGG | + | chr7_1:51052428-51052447 | None:intergenic | 40.0% |
| ! | GAGTGAGGTATCAAGGGAAA+AGG | + | chr7_1:51048840-51048859 | None:intergenic | 45.0% |
| CAGCACGTTTCTGTTCTTGT+TGG | - | chr7_1:51048908-51048927 | Msa1023400:three_prime_UTR | 45.0% | |
| CATCGCCATCATCATCATCA+TGG | - | chr7_1:51049314-51049333 | Msa1023400:intron | 45.0% | |
| CATCATGGAAGTGATGTGAG+TGG | - | chr7_1:51049329-51049348 | Msa1023400:intron | 45.0% | |
| !! | TTCTCTGATGCTGATGATGG+TGG | - | chr7_1:51049368-51049387 | Msa1023400:intron | 45.0% |
| TGAGAGGGTTCCTGAGAATA+AGG | - | chr7_1:51049544-51049563 | Msa1023400:intron | 45.0% | |
| GCCAAATGCACCTTATTCTC+AGG | + | chr7_1:51049557-51049576 | None:intergenic | 45.0% | |
| CAATAGGAGGACCAGATTCA+TGG | + | chr7_1:51049631-51049650 | None:intergenic | 45.0% | |
| CGATACCTACGTGTTAGTGT+CGG | + | chr7_1:51049969-51049988 | None:intergenic | 45.0% | |
| AGTCAGTGTCGTGTTTGTGT+CGG | - | chr7_1:51050041-51050060 | Msa1023400:intron | 45.0% | |
| CTGACATGTCTTAGTGCAGT+GGG | - | chr7_1:51050357-51050376 | Msa1023400:intron | 45.0% | |
| !! | GATCATAAGGGTTGGTGCTA+TGG | + | chr7_1:51050631-51050650 | None:intergenic | 45.0% |
| GCACCAACCCTTATGATCAA+AGG | - | chr7_1:51050633-51050652 | Msa1023400:intron | 45.0% | |
| CGCACATGCCTTTGATCATA+AGG | + | chr7_1:51050644-51050663 | None:intergenic | 45.0% | |
| ! | TTTGTTGGGGCCTTTTGTTG+AGG | - | chr7_1:51051099-51051118 | Msa1023400:intron | 45.0% |
| GTGATTGGTACCTTCATTGG+TGG | - | chr7_1:51051253-51051272 | Msa1023400:intron | 45.0% | |
| !! | AAACCAGCTTTGAAGGTGAG+AGG | - | chr7_1:51051417-51051436 | Msa1023400:intron | 45.0% |
| AAACCTCTCACCTTCAAAGC+TGG | + | chr7_1:51051423-51051442 | None:intergenic | 45.0% | |
| TCATCACACCTAGCATGACT+GGG | - | chr7_1:51051512-51051531 | Msa1023400:intron | 45.0% | |
| ATATCGTGCTTAACGCATCC+TGG | - | chr7_1:51051602-51051621 | Msa1023400:intron | 45.0% | |
| TGTGTGTGCAGATGACTCAA+AGG | - | chr7_1:51051842-51051861 | Msa1023400:CDS | 45.0% | |
| GTGTGTGCAGATGACTCAAA+GGG | - | chr7_1:51051843-51051862 | Msa1023400:CDS | 45.0% | |
| CGCAAGCAAACTAAGAGCTA+AGG | + | chr7_1:51051981-51052000 | None:intergenic | 45.0% | |
| !!! | ATATGAAGTGGTTTTGGGGG+AGG | - | chr7_1:51052069-51052088 | Msa1023400:CDS | 45.0% |
| GAACGTTTACAGTCCAACTG+AGG | - | chr7_1:51052168-51052187 | Msa1023400:five_prime_UTR | 45.0% | |
| ! | TGTTGAGAGTGTGGATGATG+CGG | + | chr7_1:51052230-51052249 | None:intergenic | 45.0% |
| AAGGAGCAAACAAGCCAAAG+AGG | - | chr7_1:51052411-51052430 | Msa1023400:five_prime_UTR | 45.0% | |
| AACAAGCCAAAGAGGCAGAA+AGG | - | chr7_1:51052419-51052438 | Msa1023400:five_prime_UTR | 45.0% | |
| ACAAGCCAAAGAGGCAGAAA+GGG | - | chr7_1:51052420-51052439 | Msa1023400:five_prime_UTR | 45.0% | |
| GGAAGTGATGTGAGTGGTGA+AGG | - | chr7_1:51049335-51049354 | Msa1023400:intron | 50.0% | |
| AGACACCGACACTAACACGT+AGG | - | chr7_1:51049961-51049980 | Msa1023400:intron | 50.0% | |
| GCTGACATGTCTTAGTGCAG+TGG | - | chr7_1:51050356-51050375 | Msa1023400:intron | 50.0% | |
| ! | TTGGGGCCTTTTGTTGAGGA+AGG | - | chr7_1:51051103-51051122 | Msa1023400:intron | 50.0% |
| CAGTCATGCTAGGTGTGATG+AGG | + | chr7_1:51051513-51051532 | None:intergenic | 50.0% | |
| CTCATCACACCTAGCATGAC+TGG | - | chr7_1:51051511-51051530 | Msa1023400:intron | 50.0% | |
| !! | GGCTTGGTGCGTGGATAATA+CGG | - | chr7_1:51051533-51051552 | Msa1023400:intron | 50.0% |
| TTGGTGCGTGGATAATACGG+TGG | - | chr7_1:51051536-51051555 | Msa1023400:intron | 50.0% | |
| TGGTGCGTGGATAATACGGT+GGG | - | chr7_1:51051537-51051556 | Msa1023400:intron | 50.0% | |
| ACACCTAGCATGACTGGGCT+TGG | - | chr7_1:51051517-51051536 | Msa1023400:intron | 55.0% | |
| TGCGTGGATAATACGGTGGG+TGG | - | chr7_1:51051540-51051559 | Msa1023400:intron | 55.0% | |
| AGGAACGGCTGTTGAGAGTG+TGG | + | chr7_1:51052239-51052258 | None:intergenic | 55.0% | |
| AGGCATGTGCGACACGACAC+CGG | - | chr7_1:51050653-51050672 | Msa1023400:intron | 60.0% | |
| GCACCAAGCCCAGTCATGCT+AGG | + | chr7_1:51051523-51051542 | None:intergenic | 60.0% | |
| !! | GCATGACTGGGCTTGGTGCG+TGG | - | chr7_1:51051524-51051543 | Msa1023400:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 51048696 | 51052714 | 51048696 | ID=Msa1023400;Name=Msa1023400 |
| chr7_1 | mRNA | 51048696 | 51052714 | 51048696 | ID=Msa1023400-mRNA-1;Parent=Msa1023400;Name=Msa1023400-mRNA-1;_AED=0.13;_eAED=0.13;_QI=567|1|1|1|1|1|2|339|235 |
| chr7_1 | exon | 51048696 | 51049272 | 51048696 | ID=Msa1023400-mRNA-1:exon:10042;Parent=Msa1023400-mRNA-1 |
| chr7_1 | exon | 51051678 | 51052714 | 51051678 | ID=Msa1023400-mRNA-1:exon:10041;Parent=Msa1023400-mRNA-1 |
| chr7_1 | five_prime_UTR | 51052148 | 51052714 | 51052148 | ID=Msa1023400-mRNA-1:five_prime_utr;Parent=Msa1023400-mRNA-1 |
| chr7_1 | CDS | 51051678 | 51052147 | 51051678 | ID=Msa1023400-mRNA-1:cds;Parent=Msa1023400-mRNA-1 |
| chr7_1 | CDS | 51049035 | 51049272 | 51049035 | ID=Msa1023400-mRNA-1:cds;Parent=Msa1023400-mRNA-1 |
| chr7_1 | three_prime_UTR | 51048696 | 51049034 | 51048696 | ID=Msa1023400-mRNA-1:three_prime_utr;Parent=Msa1023400-mRNA-1 |
| Gene Sequence |
| Protein sequence |
