AlfalfaGEDB | Msa1131030

M. sativa cultivar zhongmu-4 / Msa1131030

KEGG: K02942
GO: GO:0001932 GO:0001934 GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006412 GO:0006518 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009893 GO:0009987 GO:0010467 GO:0010562 GO:0010604 GO:0015934 GO:0016020 GO:0019207 GO:0019209 GO:0019220 GO:0019222 GO:0019538 GO:0019887 GO:0022625 GO:0022626 GO:0030234 GO:0030295 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0034641 GO:0034645 GO:0042325 GO:0042327 GO:0042788 GO:0043043 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043549 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0098772 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00428.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1131030	XP_024625385.1	94.737	114	2	2	6	116	1	113	9.97e-64	199

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1131030	sp\|Q8LCW9\|RLA11_ARATH	54.545	110	49	1	7	115	3	112	2.56e-25	94.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1131030	G7L532	94.737	114	2	2	6	116	1	113	4.76e-64	199

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa1131030	0.804889	1.739476e-49	-8.615850e-47
Msa0027590	Msa1131030	0.814638	1.391248e-51	-8.615850e-47
Msa0089540	Msa1131030	0.807017	6.206345e-50	-8.615850e-47
Msa0114600	Msa1131030	0.821456	3.999933e-53	-8.615850e-47
Msa0602900	Msa1131030	0.820940	5.257715e-53	-8.615850e-47
Msa0605890	Msa1131030	0.816069	6.687284e-52	-8.615850e-47
Msa0622230	Msa1131030	0.848570	5.632858e-60	-8.615850e-47
Msa0643960	Msa1131030	0.823629	1.249398e-53	-8.615850e-47
Msa0748350	Msa1131030	0.845059	5.141985e-59	-8.615850e-47
Msa0790450	Msa1131030	0.811905	5.540578e-51	-8.615850e-47
Msa0167860	Msa1131030	0.838543	2.702317e-57	-8.615850e-47
Msa0192300	Msa1131030	0.821030	5.014309e-53	-8.615850e-47
Msa0195030	Msa1131030	0.830676	2.568001e-55	-8.615850e-47
Msa0237180	Msa1131030	0.827713	1.344156e-54	-8.615850e-47
Msa0371490	Msa1131030	0.816165	6.365988e-52	-8.615850e-47
Msa0377370	Msa1131030	0.848675	5.269440e-60	-8.615850e-47
Msa0426090	Msa1131030	0.812124	4.963578e-51	-8.615850e-47
Msa0472480	Msa1131030	0.814008	1.916749e-51	-8.615850e-47
Msa1085850	Msa1131030	0.807644	4.569625e-50	-8.615850e-47
Msa0239420	Msa1131030	0.818318	2.086420e-52	-8.615850e-47
Msa0281330	Msa1131030	0.866135	3.557620e-65	-8.615850e-47
Msa0281370	Msa1131030	0.873805	1.106054e-67	-8.615850e-47
Msa0301250	Msa1131030	0.819109	1.379957e-52	-8.615850e-47
Msa0313060	Msa1131030	0.840568	8.040858e-58	-8.615850e-47
Msa0315660	Msa1131030	0.815967	7.047366e-52	-8.615850e-47
Msa1130680	Msa1131030	0.902116	1.346109e-78	-8.615850e-47
Msa1131030	Msa1165640	0.845482	3.950549e-59	-8.615850e-47
Msa1131030	Msa1186030	0.811554	6.607022e-51	-8.615850e-47
Msa1131030	Msa1235950	0.829635	4.611355e-55	-8.615850e-47
Msa1131030	Msa1235980	0.828271	9.866538e-55	-8.615850e-47
Msa1131030	Msa1237040	0.811642	6.322968e-51	-8.615850e-47
Msa1131030	Msa1351020	0.817472	3.240044e-52	-8.615850e-47
Msa1131030	Msa1425070	0.989636	5.581041e-179	-8.615850e-47
Msa1131030	Msa1446410	0.800672	1.291268e-48	-8.615850e-47
Msa1131030	Msa1450560	0.809697	1.664414e-50	-8.615850e-47
Msa1131030	Msa1465700	0.828672	7.891635e-55	-8.615850e-47
Msa0547920	Msa1131030	0.821041	4.984261e-53	-8.615850e-47
Msa0573550	Msa1131030	0.857822	1.255714e-62	-8.615850e-47
Msa0929700	Msa1131030	0.873755	1.150206e-67	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1131030	MtrunA17_Chr7g0276131	94.737	114	2	2	6	116	1	113	9.17e-68	199
Msa1131030	MtrunA17_Chr8g0345951	57.273	110	45	1	6	115	1	108	2.32e-32	109
Msa1131030	MtrunA17_Chr4g0013621	56.364	110	48	0	6	115	1	110	4.80e-26	93.6
Msa1131030	MtrunA17_Chr3g0127831	56.364	110	48	0	6	115	1	110	6.07e-24	88.6
Msa1131030	MtrunA17_Chr2g0311301	55.455	110	49	0	6	115	1	110	6.07e-24	88.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1131030	AT5G24510.1	52.679	112	50	2	6	115	1	111	3.68e-32	109
Msa1131030	AT1G01100.4	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1131030	AT1G01100.1	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1131030	AT1G01100.2	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1131030	AT4G00810.1	53.571	112	48	2	7	115	3	113	3.96e-26	94.4
Msa1131030	AT4G00810.2	53.571	112	48	2	7	115	3	113	3.96e-26	94.4
Msa1131030	AT1G01100.3	48.624	109	41	1	7	115	3	96	5.77e-26	93.6
Msa1131030	AT5G47700.1	54.054	111	49	1	7	115	3	113	9.06e-26	93.6
Msa1131030	AT5G47700.2	54.054	111	49	1	7	115	3	113	9.06e-26	93.6

Find 40 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTATTAGCTCTTTGAATAC+TGG	0.295098	7_3:+83341943	Msa1131030:three_prime_UTR
AGCAGCAGCTGGAGCAGCAG+CGG	0.297502	7_3:-83341819	None:intergenic
CTCTCTTCTTCCTCTGGCTC+TGG	0.324115	7_3:-83341854	None:intergenic
AAATGATATGATTGCTTGCT+TGG	0.329661	7_3:+83342147	Msa1131030:three_prime_UTR
TTCTTCTCAGCAGCAGCAGC+TGG	0.337075	7_3:-83341830	None:intergenic
ATTCGGCTTGTTCGATGAAT+AGG	0.347729	7_3:+83341892	Msa1131030:CDS
AGAAGAGAGCGACGAGGAAA+TGG	0.349286	7_3:+83341868	Msa1131030:CDS
AGGTTGATGTTGAATCCTTC+TGG	0.358591	7_3:+83341681	Msa1131030:CDS
TTTGCTATCACTTGAGGATT+CGG	0.364443	7_3:+83341987	Msa1131030:three_prime_UTR
CCACCACCTGATGCTGCAAC+TGG	0.368389	7_3:-83341794	None:intergenic
GCTGCTCCAGTTGCAGCATC+AGG	0.384530	7_3:+83341788	Msa1131030:CDS
TGCTCCACCTCCAGCAGCAC+TGG	0.392502	7_3:-83341756	None:intergenic
TCGTCGCTCTCTTCTTCCTC+TGG	0.421710	7_3:-83341860	None:intergenic
GATTTGATTGCCAGTGCTGC+TGG	0.422177	7_3:+83341746	Msa1131030:CDS
TTCTTATGATCCTAATGGAT+TGG	0.442659	7_3:+83342287	Msa1131030:three_prime_UTR
CAACAAAGTTGTGATGTTGT+CGG	0.447259	7_3:-83341648	None:intergenic
ATGAACCGAACCAATCCATT+AGG	0.451768	7_3:-83342297	None:intergenic
ATTGCCAGTGCTGCTGGAGG+TGG	0.452006	7_3:+83341752	Msa1131030:CDS
ATGATCCTAATGGATTGGTT+CGG	0.464603	7_3:+83342292	Msa1131030:three_prime_UTR
AAAATAACAAAACATTTACT+TGG	0.464648	7_3:-83342010	None:intergenic
GTGATGTTGTCGGCAGTTGC+TGG	0.481555	7_3:-83341638	None:intergenic
AATGATATGATTGCTTGCTT+GGG	0.483094	7_3:+83342148	Msa1131030:three_prime_UTR
GAAGAGAGCGACGAGGAAAT+GGG	0.488268	7_3:+83341869	Msa1131030:CDS
CCAGTTGCAGCATCAGGTGG+TGG	0.493184	7_3:+83341794	Msa1131030:CDS
TTAGCTCTTTGAATACTGGT+TGG	0.495732	7_3:+83341947	Msa1131030:three_prime_UTR
GGATTCAACATCAACCTTTG+CGG	0.496398	7_3:-83341675	None:intergenic
AGCGACGAGGAAATGGGATT+CGG	0.497435	7_3:+83341875	Msa1131030:CDS
CTGGAATGTTGTCATCTTCG+AGG	0.500813	7_3:-83341619	None:intergenic
GCAAGTTTAGCGAATAAAGC+GGG	0.558481	7_3:-83341704	None:intergenic
TGTCATCTTCGAGGATGAGA+AGG	0.559827	7_3:-83341610	None:intergenic
GCTCCAGTTGCAGCATCAGG+TGG	0.561855	7_3:+83341791	Msa1131030:CDS
AACTTTGTTGAAATCCGCAA+AGG	0.566474	7_3:+83341661	Msa1131030:CDS
AGCGAATAAAGCGGGCCAGA+AGG	0.567952	7_3:-83341696	None:intergenic
AGCAAGTTTAGCGAATAAAG+CGG	0.583424	7_3:-83341705	None:intergenic
TGGAGGTGGAGCAGCTGTTG+CGG	0.612651	7_3:+83341766	Msa1131030:CDS
GTCATCTTCGAGGATGAGAA+GGG	0.616441	7_3:-83341609	None:intergenic
TGAGAAGAAACCAGAGCCAG+AGG	0.638704	7_3:+83341844	Msa1131030:CDS
TTGATTGCCAGTGCTGCTGG+AGG	0.642263	7_3:+83341749	Msa1131030:CDS
AGAGGAAGAAGAGAGCGACG+AGG	0.663703	7_3:+83341862	Msa1131030:CDS
TGTAGTGTGAAAATGTCGCT+CGG	0.684963	7_3:+83341566	Msa1131030:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAATATGCAAATAAATA+TGG	+	chr7_3:83340951-83340970	Msa1131030:intron	10.0%
!!!	CTTTTTGAAAAAAAAAAAAA+TGG	-	chr7_3:83341091-83341110	None:intergenic	10.0%
!!!	CATTTTTTTTTTTTTCAAAA+AGG	+	chr7_3:83341089-83341108	Msa1131030:intron	10.0%
!!	AATAAATATGCAAATAAATA+TGG	+	chr7_3:83340951-83340970	Msa1131030:intron	10.0%
!!!	CTTTTTGAAAAAAAAAAAAA+TGG	-	chr7_3:83341091-83341110	None:intergenic	10.0%
!!!	CATTTTTTTTTTTTTCAAAA+AGG	+	chr7_3:83341089-83341108	Msa1131030:intron	10.0%
!!	AAATATAATAATTGTAGAAG+AGG	+	chr7_3:83340528-83340547	Msa1131030:intron	15.0%
!!!	GATTTTTTTTTTTCAGAATA+AGG	+	chr7_3:83340623-83340642	Msa1131030:intron	15.0%
!!	TTTCTAAATGAAAAATCAAA+AGG	-	chr7_3:83340848-83340867	None:intergenic	15.0%
!!!	ATTTTTCATTTAGAAAGAAA+AGG	+	chr7_3:83340852-83340871	Msa1131030:intron	15.0%
!!!	TTTTTTTTTTTTCAAAAAGG+AGG	+	chr7_3:83341092-83341111	Msa1131030:intron	15.0%
!!	AAAATAACAAAACATTTACT+TGG	-	chr7_3:83342013-83342032	None:intergenic	15.0%
!!!	TCATTATCTTTTATCTTTTT+AGG	+	chr7_3:83342208-83342227	Msa1131030:three_prime_UTR	15.0%
!!	AAATATAATAATTGTAGAAG+AGG	+	chr7_3:83340528-83340547	Msa1131030:intron	15.0%
!!!	GATTTTTTTTTTTCAGAATA+AGG	+	chr7_3:83340623-83340642	Msa1131030:intron	15.0%
!!	TTTCTAAATGAAAAATCAAA+AGG	-	chr7_3:83340848-83340867	None:intergenic	15.0%
!!!	ATTTTTCATTTAGAAAGAAA+AGG	+	chr7_3:83340852-83340871	Msa1131030:intron	15.0%
!!!	TTTTTTTTTTTTCAAAAAGG+AGG	+	chr7_3:83341092-83341111	Msa1131030:intron	15.0%
!!	AAAATAACAAAACATTTACT+TGG	-	chr7_3:83342013-83342032	None:intergenic	15.0%
!!!	TCATTATCTTTTATCTTTTT+AGG	+	chr7_3:83342208-83342227	Msa1131030:three_prime_UTR	15.0%
!!	TTAGAATTTAAATATCGAGA+GGG	-	chr7_3:83340130-83340149	None:intergenic	20.0%
!!!	TTTAGAATTTAAATATCGAG+AGG	-	chr7_3:83340131-83340150	None:intergenic	20.0%
!!!	GCAAAAAAACTAAATTGTTT+TGG	-	chr7_3:83340162-83340181	None:intergenic	20.0%
!!	AAAAAAAATATTTCATCCCT+TGG	+	chr7_3:83340415-83340434	Msa1131030:intron	20.0%
!!	AAAAATTTAAACACTTCAGT+TGG	-	chr7_3:83340448-83340467	None:intergenic	20.0%
!!!	TTTTTAATTATGTGATTCTG+AGG	-	chr7_3:83340788-83340807	None:intergenic	20.0%
!!	AAAGGAACAAAAAAGAAAAA+AGG	+	chr7_3:83341269-83341288	Msa1131030:intron	20.0%
!!!	TTTGTTTTTGTTATTCGAAT+TGG	+	chr7_3:83341492-83341511	Msa1131030:intron	20.0%
!!	TTAGAATTTAAATATCGAGA+GGG	-	chr7_3:83340130-83340149	None:intergenic	20.0%
!!!	TTTAGAATTTAAATATCGAG+AGG	-	chr7_3:83340131-83340150	None:intergenic	20.0%
!!!	GCAAAAAAACTAAATTGTTT+TGG	-	chr7_3:83340162-83340181	None:intergenic	20.0%
!!	AAAAAAAATATTTCATCCCT+TGG	+	chr7_3:83340415-83340434	Msa1131030:intron	20.0%
!!	AAAAATTTAAACACTTCAGT+TGG	-	chr7_3:83340448-83340467	None:intergenic	20.0%
!!!	TTTTTAATTATGTGATTCTG+AGG	-	chr7_3:83340788-83340807	None:intergenic	20.0%
!!	AAAGGAACAAAAAAGAAAAA+AGG	+	chr7_3:83341269-83341288	Msa1131030:intron	20.0%
!!!	TTTGTTTTTGTTATTCGAAT+TGG	+	chr7_3:83341492-83341511	Msa1131030:intron	20.0%
!!	TTTAGTCTTTAACAACGAAA+GGG	-	chr7_3:83340197-83340216	None:intergenic	25.0%
!!	ATTTAGTCTTTAACAACGAA+AGG	-	chr7_3:83340198-83340217	None:intergenic	25.0%
!	CCACGTAAAAAAAAACAATT+AGG	-	chr7_3:83340247-83340266	None:intergenic	25.0%
!!!	CCTAATTGTTTTTTTTTACG+TGG	+	chr7_3:83340244-83340263	Msa1131030:intron	25.0%
!!!	ACAAAAATTGCAACTTGTTT+TGG	-	chr7_3:83340338-83340357	None:intergenic	25.0%
!	TCAGAATAAGGATGAAAATA+TGG	+	chr7_3:83340635-83340654	Msa1131030:intron	25.0%
!	TTTAGTGTTTACGAAAAACT+CGG	+	chr7_3:83340758-83340777	Msa1131030:intron	25.0%
!	CATAAGCATGCATTATTTAA+AGG	+	chr7_3:83340896-83340915	Msa1131030:intron	25.0%
!!	CTGTTTTGTATTATTGCTTT+TGG	-	chr7_3:83341009-83341028	None:intergenic	25.0%
!	GAACAAAAAAGAAAAAAGGA+GGG	+	chr7_3:83341273-83341292	Msa1131030:intron	25.0%
!!!	ATAGAAGTATGGTTCTAAAA+TGG	+	chr7_3:83341323-83341342	Msa1131030:intron	25.0%
!!!	TAGAAGTATGGTTCTAAAAT+GGG	+	chr7_3:83341324-83341343	Msa1131030:intron	25.0%
!!	GCAAATGTTTTGTGAAATTA+GGG	-	chr7_3:83341405-83341424	None:intergenic	25.0%
!	CTAATTTCACAAAACATTTG+CGG	+	chr7_3:83341404-83341423	Msa1131030:intron	25.0%
!	TTGCTGAGAAGAAAAATATT+AGG	+	chr7_3:83341723-83341742	Msa1131030:CDS	25.0%
!	TGCTGAGAAGAAAAATATTA+GGG	+	chr7_3:83341724-83341743	Msa1131030:CDS	25.0%
!!!	TTTTATTTTGCTATCACTTG+AGG	+	chr7_3:83341981-83342000	Msa1131030:three_prime_UTR	25.0%
!!	AGATTTTCTTATGATCCTAA+TGG	+	chr7_3:83342282-83342301	Msa1131030:three_prime_UTR	25.0%
!!	TTTAGTCTTTAACAACGAAA+GGG	-	chr7_3:83340197-83340216	None:intergenic	25.0%
!!	ATTTAGTCTTTAACAACGAA+AGG	-	chr7_3:83340198-83340217	None:intergenic	25.0%
!	CCACGTAAAAAAAAACAATT+AGG	-	chr7_3:83340247-83340266	None:intergenic	25.0%
!!!	CCTAATTGTTTTTTTTTACG+TGG	+	chr7_3:83340244-83340263	Msa1131030:intron	25.0%
!!!	ACAAAAATTGCAACTTGTTT+TGG	-	chr7_3:83340338-83340357	None:intergenic	25.0%
!	TCAGAATAAGGATGAAAATA+TGG	+	chr7_3:83340635-83340654	Msa1131030:intron	25.0%
!	TTTAGTGTTTACGAAAAACT+CGG	+	chr7_3:83340758-83340777	Msa1131030:intron	25.0%
!	CATAAGCATGCATTATTTAA+AGG	+	chr7_3:83340896-83340915	Msa1131030:intron	25.0%
!!	CTGTTTTGTATTATTGCTTT+TGG	-	chr7_3:83341009-83341028	None:intergenic	25.0%
!	GAACAAAAAAGAAAAAAGGA+GGG	+	chr7_3:83341273-83341292	Msa1131030:intron	25.0%
!!!	ATAGAAGTATGGTTCTAAAA+TGG	+	chr7_3:83341323-83341342	Msa1131030:intron	25.0%
!!!	TAGAAGTATGGTTCTAAAAT+GGG	+	chr7_3:83341324-83341343	Msa1131030:intron	25.0%
!!	GCAAATGTTTTGTGAAATTA+GGG	-	chr7_3:83341405-83341424	None:intergenic	25.0%
!	CTAATTTCACAAAACATTTG+CGG	+	chr7_3:83341404-83341423	Msa1131030:intron	25.0%
!	TTGCTGAGAAGAAAAATATT+AGG	+	chr7_3:83341723-83341742	Msa1131030:CDS	25.0%
!	TGCTGAGAAGAAAAATATTA+GGG	+	chr7_3:83341724-83341743	Msa1131030:CDS	25.0%
!!!	TTTTATTTTGCTATCACTTG+AGG	+	chr7_3:83341981-83342000	Msa1131030:three_prime_UTR	25.0%
!!	AGATTTTCTTATGATCCTAA+TGG	+	chr7_3:83342282-83342301	Msa1131030:three_prime_UTR	25.0%
	ATAACACTAGTACAACACAA+AGG	-	chr7_3:83340595-83340614	None:intergenic	30.0%
	ATTAAAATCAGCGAACAACT+CGG	+	chr7_3:83341213-83341232	Msa1131030:intron	30.0%
	TTTACTCAAATCACTGCAAA+AGG	+	chr7_3:83341245-83341264	Msa1131030:intron	30.0%
	GGAACAAAAAAGAAAAAAGG+AGG	+	chr7_3:83341272-83341291	Msa1131030:intron	30.0%
	ACCATACTTCTATTCTATAC+CGG	-	chr7_3:83341316-83341335	None:intergenic	30.0%
!	TTTTGTGAAATTAGGGTTTC+GGG	-	chr7_3:83341398-83341417	None:intergenic	30.0%
!	GTTTTGTGAAATTAGGGTTT+CGG	-	chr7_3:83341399-83341418	None:intergenic	30.0%
!	CGCAAATGTTTTGTGAAATT+AGG	-	chr7_3:83341406-83341425	None:intergenic	30.0%
	AAATCAAGATCTGATCTGTT+AGG	-	chr7_3:83341543-83341562	None:intergenic	30.0%
!	TCTATTAGCTCTTTGAATAC+TGG	+	chr7_3:83341943-83341962	Msa1131030:three_prime_UTR	30.0%
	AAATGATATGATTGCTTGCT+TGG	+	chr7_3:83342147-83342166	Msa1131030:three_prime_UTR	30.0%
	AATGATATGATTGCTTGCTT+GGG	+	chr7_3:83342148-83342167	Msa1131030:three_prime_UTR	30.0%
!	TTCTTATGATCCTAATGGAT+TGG	+	chr7_3:83342287-83342306	Msa1131030:three_prime_UTR	30.0%
	ATAACACTAGTACAACACAA+AGG	-	chr7_3:83340595-83340614	None:intergenic	30.0%
	ATTAAAATCAGCGAACAACT+CGG	+	chr7_3:83341213-83341232	Msa1131030:intron	30.0%
	TTTACTCAAATCACTGCAAA+AGG	+	chr7_3:83341245-83341264	Msa1131030:intron	30.0%
	GGAACAAAAAAGAAAAAAGG+AGG	+	chr7_3:83341272-83341291	Msa1131030:intron	30.0%
	ACCATACTTCTATTCTATAC+CGG	-	chr7_3:83341316-83341335	None:intergenic	30.0%
!	TTTTGTGAAATTAGGGTTTC+GGG	-	chr7_3:83341398-83341417	None:intergenic	30.0%
!	GTTTTGTGAAATTAGGGTTT+CGG	-	chr7_3:83341399-83341418	None:intergenic	30.0%
!	CGCAAATGTTTTGTGAAATT+AGG	-	chr7_3:83341406-83341425	None:intergenic	30.0%
	AAATCAAGATCTGATCTGTT+AGG	-	chr7_3:83341543-83341562	None:intergenic	30.0%
!	TCTATTAGCTCTTTGAATAC+TGG	+	chr7_3:83341943-83341962	Msa1131030:three_prime_UTR	30.0%
	AAATGATATGATTGCTTGCT+TGG	+	chr7_3:83342147-83342166	Msa1131030:three_prime_UTR	30.0%
	AATGATATGATTGCTTGCTT+GGG	+	chr7_3:83342148-83342167	Msa1131030:three_prime_UTR	30.0%
!	TTCTTATGATCCTAATGGAT+TGG	+	chr7_3:83342287-83342306	Msa1131030:three_prime_UTR	30.0%
	TTTAAATATCGAGAGGGAGA+GGG	-	chr7_3:83340124-83340143	None:intergenic	35.0%
	ATTTAAATATCGAGAGGGAG+AGG	-	chr7_3:83340125-83340144	None:intergenic	35.0%
	AACGAAAGGGATTAAGTTAC+AGG	-	chr7_3:83340184-83340203	None:intergenic	35.0%
	AAAGGATAAGTGACGGTTTA+GGG	-	chr7_3:83340577-83340596	None:intergenic	35.0%
	ACAACACAAAGGATAAGTGA+CGG	-	chr7_3:83340584-83340603	None:intergenic	35.0%
	CAAATCACTGCAAAAGGAAA+AGG	+	chr7_3:83341251-83341270	Msa1131030:intron	35.0%
	TCCGGTATAGAATAGAAGTA+TGG	+	chr7_3:83341312-83341331	Msa1131030:intron	35.0%
!!	TTCTAATGCTGATTCTCCTT+GGG	-	chr7_3:83341363-83341382	None:intergenic	35.0%
!!	ATTCTAATGCTGATTCTCCT+TGG	-	chr7_3:83341364-83341383	None:intergenic	35.0%
	TTTGTGAAATTAGGGTTTCG+GGG	-	chr7_3:83341397-83341416	None:intergenic	35.0%
	GTGTTACCTGAAATTGAGAT+CGG	-	chr7_3:83341468-83341487	None:intergenic	35.0%
	CAACAAAGTTGTGATGTTGT+CGG	-	chr7_3:83341651-83341670	None:intergenic	35.0%
	AACTTTGTTGAAATCCGCAA+AGG	+	chr7_3:83341661-83341680	Msa1131030:CDS	35.0%
	AGCAAGTTTAGCGAATAAAG+CGG	-	chr7_3:83341708-83341727	None:intergenic	35.0%
!	TTAGCTCTTTGAATACTGGT+TGG	+	chr7_3:83341947-83341966	Msa1131030:three_prime_UTR	35.0%
!	TTTGCTATCACTTGAGGATT+CGG	+	chr7_3:83341987-83342006	Msa1131030:three_prime_UTR	35.0%
!!	ATGATCCTAATGGATTGGTT+CGG	+	chr7_3:83342292-83342311	Msa1131030:three_prime_UTR	35.0%
	TTTAAATATCGAGAGGGAGA+GGG	-	chr7_3:83340124-83340143	None:intergenic	35.0%
	ATTTAAATATCGAGAGGGAG+AGG	-	chr7_3:83340125-83340144	None:intergenic	35.0%
	AACGAAAGGGATTAAGTTAC+AGG	-	chr7_3:83340184-83340203	None:intergenic	35.0%
	AAAGGATAAGTGACGGTTTA+GGG	-	chr7_3:83340577-83340596	None:intergenic	35.0%
	ACAACACAAAGGATAAGTGA+CGG	-	chr7_3:83340584-83340603	None:intergenic	35.0%
	CAAATCACTGCAAAAGGAAA+AGG	+	chr7_3:83341251-83341270	Msa1131030:intron	35.0%
	TCCGGTATAGAATAGAAGTA+TGG	+	chr7_3:83341312-83341331	Msa1131030:intron	35.0%
!!	TTCTAATGCTGATTCTCCTT+GGG	-	chr7_3:83341363-83341382	None:intergenic	35.0%
!!	ATTCTAATGCTGATTCTCCT+TGG	-	chr7_3:83341364-83341383	None:intergenic	35.0%
	TTTGTGAAATTAGGGTTTCG+GGG	-	chr7_3:83341397-83341416	None:intergenic	35.0%
	GTGTTACCTGAAATTGAGAT+CGG	-	chr7_3:83341468-83341487	None:intergenic	35.0%
	CAACAAAGTTGTGATGTTGT+CGG	-	chr7_3:83341651-83341670	None:intergenic	35.0%
	AACTTTGTTGAAATCCGCAA+AGG	+	chr7_3:83341661-83341680	Msa1131030:CDS	35.0%
	AGCAAGTTTAGCGAATAAAG+CGG	-	chr7_3:83341708-83341727	None:intergenic	35.0%
!	TTAGCTCTTTGAATACTGGT+TGG	+	chr7_3:83341947-83341966	Msa1131030:three_prime_UTR	35.0%
!	TTTGCTATCACTTGAGGATT+CGG	+	chr7_3:83341987-83342006	Msa1131030:three_prime_UTR	35.0%
!!	ATGATCCTAATGGATTGGTT+CGG	+	chr7_3:83342292-83342311	Msa1131030:three_prime_UTR	35.0%
	TTAAATATCGAGAGGGAGAG+GGG	-	chr7_3:83340123-83340142	None:intergenic	40.0%
!!	TTCAGTTGGTAAGCTTCCAA+GGG	-	chr7_3:83340434-83340453	None:intergenic	40.0%
	AAGGATAAGTGACGGTTTAG+GGG	-	chr7_3:83340576-83340595	None:intergenic	40.0%
	CAAAGGATAAGTGACGGTTT+AGG	-	chr7_3:83340578-83340597	None:intergenic	40.0%
!	CGAACTCATCTAGAATTGAC+TGG	+	chr7_3:83340675-83340694	Msa1131030:intron	40.0%
!!	TCTCCTTGGGCTTTATGTTT+TGG	-	chr7_3:83341350-83341369	None:intergenic	40.0%
	TCAAGATCTGATCTGTTAGG+AGG	-	chr7_3:83341540-83341559	None:intergenic	40.0%
	TGTAGTGTGAAAATGTCGCT+CGG	+	chr7_3:83341566-83341585	Msa1131030:intron	40.0%
	GGATTCAACATCAACCTTTG+CGG	-	chr7_3:83341678-83341697	None:intergenic	40.0%
!!	AGGTTGATGTTGAATCCTTC+TGG	+	chr7_3:83341681-83341700	Msa1131030:CDS	40.0%
	GCAAGTTTAGCGAATAAAGC+GGG	-	chr7_3:83341707-83341726	None:intergenic	40.0%
!	ATTCGGCTTGTTCGATGAAT+AGG	+	chr7_3:83341892-83341911	Msa1131030:CDS	40.0%
	ATGAACCGAACCAATCCATT+AGG	-	chr7_3:83342300-83342319	None:intergenic	40.0%
	TTAAATATCGAGAGGGAGAG+GGG	-	chr7_3:83340123-83340142	None:intergenic	40.0%
!!	TTCAGTTGGTAAGCTTCCAA+GGG	-	chr7_3:83340434-83340453	None:intergenic	40.0%
	AAGGATAAGTGACGGTTTAG+GGG	-	chr7_3:83340576-83340595	None:intergenic	40.0%
	CAAAGGATAAGTGACGGTTT+AGG	-	chr7_3:83340578-83340597	None:intergenic	40.0%
!	CGAACTCATCTAGAATTGAC+TGG	+	chr7_3:83340675-83340694	Msa1131030:intron	40.0%
!!	TCTCCTTGGGCTTTATGTTT+TGG	-	chr7_3:83341350-83341369	None:intergenic	40.0%
	TCAAGATCTGATCTGTTAGG+AGG	-	chr7_3:83341540-83341559	None:intergenic	40.0%
	TGTAGTGTGAAAATGTCGCT+CGG	+	chr7_3:83341566-83341585	Msa1131030:intron	40.0%
	GGATTCAACATCAACCTTTG+CGG	-	chr7_3:83341678-83341697	None:intergenic	40.0%
!!	AGGTTGATGTTGAATCCTTC+TGG	+	chr7_3:83341681-83341700	Msa1131030:CDS	40.0%
	GCAAGTTTAGCGAATAAAGC+GGG	-	chr7_3:83341707-83341726	None:intergenic	40.0%
!	ATTCGGCTTGTTCGATGAAT+AGG	+	chr7_3:83341892-83341911	Msa1131030:CDS	40.0%
	ATGAACCGAACCAATCCATT+AGG	-	chr7_3:83342300-83342319	None:intergenic	40.0%
!!	CTTCAGTTGGTAAGCTTCCA+AGG	-	chr7_3:83340435-83340454	None:intergenic	45.0%
	ATAAGTGACGGTTTAGGGGA+GGG	-	chr7_3:83340572-83340591	None:intergenic	45.0%
	TCGTCTCCGATCTCAATTTC+AGG	+	chr7_3:83341459-83341478	Msa1131030:intron	45.0%
	GTCATCTTCGAGGATGAGAA+GGG	-	chr7_3:83341612-83341631	None:intergenic	45.0%
	TGTCATCTTCGAGGATGAGA+AGG	-	chr7_3:83341613-83341632	None:intergenic	45.0%
	CTGGAATGTTGTCATCTTCG+AGG	-	chr7_3:83341622-83341641	None:intergenic	45.0%
!!	CTTCAGTTGGTAAGCTTCCA+AGG	-	chr7_3:83340435-83340454	None:intergenic	45.0%
	ATAAGTGACGGTTTAGGGGA+GGG	-	chr7_3:83340572-83340591	None:intergenic	45.0%
	TCGTCTCCGATCTCAATTTC+AGG	+	chr7_3:83341459-83341478	Msa1131030:intron	45.0%
	GTCATCTTCGAGGATGAGAA+GGG	-	chr7_3:83341612-83341631	None:intergenic	45.0%
	TGTCATCTTCGAGGATGAGA+AGG	-	chr7_3:83341613-83341632	None:intergenic	45.0%
	CTGGAATGTTGTCATCTTCG+AGG	-	chr7_3:83341622-83341641	None:intergenic	45.0%
!!	AATTAAAAAAATTATCAAAA+AGG	+	chr7_3:83340799-83340818	Msa1131030:intron	5.0%
!!	AATTAAAAAAATTATCAAAA+AGG	+	chr7_3:83340799-83340818	Msa1131030:intron	5.0%
	GATAAGTGACGGTTTAGGGG+AGG	-	chr7_3:83340573-83340592	None:intergenic	50.0%
	CACGTACACATGTGTGTGTG+TGG	-	chr7_3:83341052-83341071	None:intergenic	50.0%
!	GCTCAAGTCGAGTTTCGAGT+TGG	-	chr7_3:83341158-83341177	None:intergenic	50.0%
	GGTTACGAAGAGTAGCAGTC+CGG	+	chr7_3:83341294-83341313	Msa1131030:intron	50.0%
	GGGCCAAAACATAAAGCCCA+AGG	+	chr7_3:83341344-83341363	Msa1131030:intron	50.0%
	AGACGACGAGAAGAGTAAGG+AGG	-	chr7_3:83341445-83341464	None:intergenic	50.0%
	GATTTGATTGCCAGTGCTGC+TGG	+	chr7_3:83341746-83341765	Msa1131030:CDS	50.0%
	TGAGAAGAAACCAGAGCCAG+AGG	+	chr7_3:83341844-83341863	Msa1131030:CDS	50.0%
	AGAAGAGAGCGACGAGGAAA+TGG	+	chr7_3:83341868-83341887	Msa1131030:CDS	50.0%
	GAAGAGAGCGACGAGGAAAT+GGG	+	chr7_3:83341869-83341888	Msa1131030:CDS	50.0%
	AGCGACGAGGAAATGGGATT+CGG	+	chr7_3:83341875-83341894	Msa1131030:CDS	50.0%
	GATAAGTGACGGTTTAGGGG+AGG	-	chr7_3:83340573-83340592	None:intergenic	50.0%
	CACGTACACATGTGTGTGTG+TGG	-	chr7_3:83341052-83341071	None:intergenic	50.0%
!	GCTCAAGTCGAGTTTCGAGT+TGG	-	chr7_3:83341158-83341177	None:intergenic	50.0%
	GGTTACGAAGAGTAGCAGTC+CGG	+	chr7_3:83341294-83341313	Msa1131030:intron	50.0%
	GGGCCAAAACATAAAGCCCA+AGG	+	chr7_3:83341344-83341363	Msa1131030:intron	50.0%
	AGACGACGAGAAGAGTAAGG+AGG	-	chr7_3:83341445-83341464	None:intergenic	50.0%
	GATTTGATTGCCAGTGCTGC+TGG	+	chr7_3:83341746-83341765	Msa1131030:CDS	50.0%
	TGAGAAGAAACCAGAGCCAG+AGG	+	chr7_3:83341844-83341863	Msa1131030:CDS	50.0%
	AGAAGAGAGCGACGAGGAAA+TGG	+	chr7_3:83341868-83341887	Msa1131030:CDS	50.0%
	GAAGAGAGCGACGAGGAAAT+GGG	+	chr7_3:83341869-83341888	Msa1131030:CDS	50.0%
	AGCGACGAGGAAATGGGATT+CGG	+	chr7_3:83341875-83341894	Msa1131030:CDS	50.0%
!	GGTTTAGGGGAGGGAAGTGT+AGG	-	chr7_3:83340563-83340582	None:intergenic	55.0%
	CGGAGACGACGAGAAGAGTA+AGG	-	chr7_3:83341448-83341467	None:intergenic	55.0%
	GTGATGTTGTCGGCAGTTGC+TGG	-	chr7_3:83341641-83341660	None:intergenic	55.0%
	AGCGAATAAAGCGGGCCAGA+AGG	-	chr7_3:83341699-83341718	None:intergenic	55.0%
!	TTGATTGCCAGTGCTGCTGG+AGG	+	chr7_3:83341749-83341768	Msa1131030:CDS	55.0%
	TTCTTCTCAGCAGCAGCAGC+TGG	-	chr7_3:83341833-83341852	None:intergenic	55.0%
!	CTCTCTTCTTCCTCTGGCTC+TGG	-	chr7_3:83341857-83341876	None:intergenic	55.0%
	TCGTCGCTCTCTTCTTCCTC+TGG	-	chr7_3:83341863-83341882	None:intergenic	55.0%
	AGAGGAAGAAGAGAGCGACG+AGG	+	chr7_3:83341862-83341881	Msa1131030:CDS	55.0%
!	GGTTTAGGGGAGGGAAGTGT+AGG	-	chr7_3:83340563-83340582	None:intergenic	55.0%
	CGGAGACGACGAGAAGAGTA+AGG	-	chr7_3:83341448-83341467	None:intergenic	55.0%
	GTGATGTTGTCGGCAGTTGC+TGG	-	chr7_3:83341641-83341660	None:intergenic	55.0%
	AGCGAATAAAGCGGGCCAGA+AGG	-	chr7_3:83341699-83341718	None:intergenic	55.0%
!	TTGATTGCCAGTGCTGCTGG+AGG	+	chr7_3:83341749-83341768	Msa1131030:CDS	55.0%
	TTCTTCTCAGCAGCAGCAGC+TGG	-	chr7_3:83341833-83341852	None:intergenic	55.0%
!	CTCTCTTCTTCCTCTGGCTC+TGG	-	chr7_3:83341857-83341876	None:intergenic	55.0%
	TCGTCGCTCTCTTCTTCCTC+TGG	-	chr7_3:83341863-83341882	None:intergenic	55.0%
	AGAGGAAGAAGAGAGCGACG+AGG	+	chr7_3:83341862-83341881	Msa1131030:CDS	55.0%
!	ATTGCCAGTGCTGCTGGAGG+TGG	+	chr7_3:83341752-83341771	Msa1131030:CDS	60.0%
	TGGAGGTGGAGCAGCTGTTG+CGG	+	chr7_3:83341766-83341785	Msa1131030:CDS	60.0%
	GCTGCTCCAGTTGCAGCATC+AGG	+	chr7_3:83341788-83341807	Msa1131030:CDS	60.0%
	GCTCCAGTTGCAGCATCAGG+TGG	+	chr7_3:83341791-83341810	Msa1131030:CDS	60.0%
	CCACCACCTGATGCTGCAAC+TGG	-	chr7_3:83341797-83341816	None:intergenic	60.0%
	CCAGTTGCAGCATCAGGTGG+TGG	+	chr7_3:83341794-83341813	Msa1131030:CDS	60.0%
!	ATTGCCAGTGCTGCTGGAGG+TGG	+	chr7_3:83341752-83341771	Msa1131030:CDS	60.0%
	TGGAGGTGGAGCAGCTGTTG+CGG	+	chr7_3:83341766-83341785	Msa1131030:CDS	60.0%
	GCTGCTCCAGTTGCAGCATC+AGG	+	chr7_3:83341788-83341807	Msa1131030:CDS	60.0%
	GCTCCAGTTGCAGCATCAGG+TGG	+	chr7_3:83341791-83341810	Msa1131030:CDS	60.0%
	CCACCACCTGATGCTGCAAC+TGG	-	chr7_3:83341797-83341816	None:intergenic	60.0%
	CCAGTTGCAGCATCAGGTGG+TGG	+	chr7_3:83341794-83341813	Msa1131030:CDS	60.0%
	TGCTCCACCTCCAGCAGCAC+TGG	-	chr7_3:83341759-83341778	None:intergenic	65.0%
	AGCAGCAGCTGGAGCAGCAG+CGG	-	chr7_3:83341822-83341841	None:intergenic	65.0%
	TGCTCCACCTCCAGCAGCAC+TGG	-	chr7_3:83341759-83341778	None:intergenic	65.0%
	AGCAGCAGCTGGAGCAGCAG+CGG	-	chr7_3:83341822-83341841	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr7_3	gene	83340090	83342338	83340090	ID=Msa1131030;Name=Msa1131030
chr7_3	mRNA	83340090	83342338	83340090	ID=Msa1131030-mRNA-1;Parent=Msa1131030;Name=Msa1131030-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0\|0\|0.5\|0.5\|0\|0\|2\|425\|116
chr7_3	exon	83340090	83340097	83340090	ID=Msa1131030-mRNA-1:exon:24752;Parent=Msa1131030-mRNA-1
chr7_3	exon	83341571	83342338	83341571	ID=Msa1131030-mRNA-1:exon:24753;Parent=Msa1131030-mRNA-1
chr7_3	CDS	83340090	83340097	83340090	ID=Msa1131030-mRNA-1:cds;Parent=Msa1131030-mRNA-1
chr7_3	CDS	83341571	83341913	83341571	ID=Msa1131030-mRNA-1:cds;Parent=Msa1131030-mRNA-1
chr7_3	three_prime_UTR	83341914	83342338	83341914	ID=Msa1131030-mRNA-1:three_prime_utr;Parent=Msa1131030-mRNA-1

Gene Sequence	>Msa1131030 ATGGTGTTTGTGAAAATGTCGCTCGGAGAAACTGCTTGCTCATACGCCCTTCTCATCCTCGAAGATGACAACATTCCAGCAACTGCCGACAACATCACAACTTTGTTGAAATCCGCAAAGGTTGATGTTGAATCCTTCTGGCCCGCTTTATTCGCTAAACTTGCTGAGAAGAAAAATATTAGGGATTTGATTGCCAGTGCTGCTGGAGGTGGAGCAGCTGTTGCGGCTGCTCCAGTTGCAGCATCAGGTGGTGGTGCCGCTGCTGCTCCAGCTGCTGCTGCTGAGAAGAAACCAGAGCCAGAGGAAGAAGAGAGCGACGAGGAAATGGGATTCGGCTTGTTCGATGAATAG
Protein sequence	>Msa1131030 MVFVKMSLGETACSYALLILEDDNIPATADNITTLLKSAKVDVESFWPALFAKLAEKKNIRDLIASAAGGGAAVAAAPVAASGGGAAAAPAAAAEKKPEPEEEESDEEMGFGLFDE*