AlfalfaGEDB | Msa0377370

M. sativa cultivar zhongmu-4 / Msa0377370

KEGG: K02934
GO: GO:0000027 GO:0002181 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003735 GO:0005198 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0005886 GO:0005911 GO:0006412 GO:0006518 GO:0006807 GO:0006996 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009506 GO:0009507 GO:0009536 GO:0009719 GO:0009725 GO:0009735 GO:0009987 GO:0010033 GO:0010467 GO:0012505 GO:0015934 GO:0016020 GO:0016043 GO:0019538 GO:0022607 GO:0022613 GO:0022618 GO:0022625 GO:0022626 GO:0030054 GO:0031974 GO:0031981 GO:0032991 GO:0034622 GO:0034641 GO:0034645 GO:0042221 GO:0042254 GO:0042255 GO:0042273 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043603 GO:0043604 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0050896 GO:0055044 GO:0065003 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0071944 GO:0097159 GO:1901363 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF03868.18

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377370	XP_003602457.1	98.283	233	4	0	1	233	1	233	4.60e-163	460

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377370	sp\|P34091\|RL6_MESCR	79.741	232	47	0	2	233	3	234	8.94e-126	358

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377370	G7J9R6	98.283	233	4	0	1	233	1	233	2.19e-163	460

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa0377370	0.802591	5.215975e-49	-8.615850e-47
Msa0002430	Msa0377370	0.800464	1.423578e-48	-8.615850e-47
Msa0003330	Msa0377370	0.807585	4.703806e-50	-8.615850e-47
Msa0027590	Msa0377370	0.813662	2.284958e-51	-8.615850e-47
Msa0042510	Msa0377370	0.804840	1.781074e-49	-8.615850e-47
Msa0071760	Msa0377370	0.827436	1.566600e-54	-8.615850e-47
Msa0079560	Msa0377370	0.810904	9.140640e-51	-8.615850e-47
Msa0086160	Msa0377370	0.862788	3.952722e-64	-8.615850e-47
Msa0089540	Msa0377370	0.823350	1.452405e-53	-8.615850e-47
Msa0114600	Msa0377370	0.858479	8.011650e-63	-8.615850e-47
Msa0123290	Msa0377370	0.825201	5.332822e-54	-8.615850e-47
Msa0127230	Msa0377370	0.803040	4.214520e-49	-8.615850e-47
Msa0132460	Msa0377370	0.828024	1.131455e-54	-8.615850e-47
Msa0134580	Msa0377370	0.801023	1.094630e-48	-8.615850e-47
Msa0167860	Msa0377370	0.863084	3.202758e-64	-8.615850e-47
Msa0174580	Msa0377370	0.801362	9.331543e-49	-8.615850e-47
Msa0182050	Msa0377370	0.829191	5.909034e-55	-8.615850e-47
Msa0182100	Msa0377370	0.848438	6.128286e-60	-8.615850e-47
Msa0183840	Msa0377370	0.811666	6.246485e-51	-8.615850e-47
Msa0188740	Msa0377370	0.833136	6.342600e-56	-8.615850e-47
Msa0192300	Msa0377370	0.886413	3.494249e-72	-8.615850e-47
Msa0195030	Msa0377370	0.824580	7.472372e-54	-8.615850e-47
Msa0219090	Msa0377370	0.870582	1.308755e-66	-8.615850e-47
Msa0235050	Msa0377370	0.820908	5.349740e-53	-8.615850e-47
Msa0237180	Msa0377370	0.837408	5.291008e-57	-8.615850e-47
Msa0371490	Msa0377370	0.823881	1.090673e-53	-8.615850e-47
Msa0376850	Msa0377370	0.836249	1.045165e-56	-8.615850e-47
Msa0377370	Msa0383690	0.801034	1.088999e-48	-8.615850e-47
Msa0377370	Msa0388520	0.808245	3.404648e-50	-8.615850e-47
Msa0377370	Msa0416470	0.802046	6.755045e-49	-8.615850e-47
Msa0377370	Msa0419710	0.826923	2.078196e-54	-8.615850e-47
Msa0377370	Msa0426090	0.822810	1.941411e-53	-8.615850e-47
Msa0377370	Msa0426250	0.826561	2.535052e-54	-8.615850e-47
Msa0377370	Msa0426940	0.886053	4.777497e-72	-8.615850e-47
Msa0377370	Msa0433060	0.873115	1.888146e-67	-8.615850e-47
Msa0377370	Msa0450150	0.860523	1.947059e-63	-8.615850e-47
Msa0377370	Msa0472480	0.823079	1.679977e-53	-8.615850e-47
Msa0377370	Msa0482560	0.816979	4.181325e-52	-8.615850e-47
Msa0377370	Msa0511760	0.804891	1.737369e-49	-8.615850e-47
Msa0377370	Msa0516830	0.837106	6.322477e-57	-8.615850e-47
Msa0377370	Msa0521730	0.847380	1.199412e-59	-8.615850e-47
Msa0377370	Msa0524680	0.871202	8.180786e-67	-8.615850e-47
Msa0377370	Msa0547920	0.873651	1.246240e-67	-8.615850e-47
Msa0377370	Msa0550490	0.840195	1.006373e-57	-8.615850e-47
Msa0377370	Msa0573550	0.890057	1.389423e-73	-8.615850e-47
Msa0377370	Msa0574780	0.842290	2.831046e-58	-8.615850e-47
Msa0377370	Msa0585570	0.827254	1.731517e-54	-8.615850e-47
Msa0377370	Msa0597240	0.839855	1.234348e-57	-8.615850e-47
Msa0377370	Msa0602900	0.880903	3.739132e-70	-8.615850e-47
Msa0377370	Msa0605890	0.864629	1.060082e-64	-8.615850e-47
Msa0377370	Msa0609120	0.817026	4.081754e-52	-8.615850e-47
Msa0377370	Msa0619230	0.822341	2.494914e-53	-8.615850e-47
Msa0377370	Msa0621190	0.812803	3.527357e-51	-8.615850e-47
Msa0377370	Msa0622230	0.814728	1.329231e-51	-8.615850e-47
Msa0377370	Msa0643960	0.880107	7.204670e-70	-8.615850e-47
Msa0377370	Msa0663400	0.832490	9.178067e-56	-8.615850e-47
Msa0377370	Msa0686660	0.819587	1.074211e-52	-8.615850e-47
Msa0377370	Msa0694400	0.845814	3.212289e-59	-8.615850e-47
Msa0377370	Msa0704860	0.801399	9.172188e-49	-8.615850e-47
Msa0377370	Msa0708630	0.829303	5.550318e-55	-8.615850e-47
Msa0377370	Msa0748350	0.836996	6.743527e-57	-8.615850e-47
Msa0377370	Msa0790450	0.848422	6.192547e-60	-8.615850e-47
Msa0377370	Msa0796490	0.807886	4.059662e-50	-8.615850e-47
Msa0377370	Msa0835190	0.816792	4.607179e-52	-8.615850e-47
Msa0377370	Msa0902730	0.803132	4.033973e-49	-8.615850e-47
Msa0377370	Msa0929700	0.899981	1.155383e-77	-8.615850e-47
Msa0377370	Msa0930100	0.803942	2.740363e-49	-8.615850e-47
Msa0377370	Msa0930790	0.808191	3.496329e-50	-8.615850e-47
Msa0377370	Msa0930890	0.857461	1.606884e-62	-8.615850e-47
Msa0377370	Msa1047020	0.810200	1.297421e-50	-8.615850e-47
Msa0377370	Msa1070810	0.816536	5.257071e-52	-8.615850e-47
Msa0377370	Msa1082050	0.821461	3.989234e-53	-8.615850e-47
Msa0377370	Msa1085850	0.897722	1.067154e-76	-8.615850e-47
Msa0377370	Msa1116940	0.826196	3.096880e-54	-8.615850e-47
Msa0377370	Msa1118790	0.801668	8.076511e-49	-8.615850e-47
Msa0377370	Msa1126690	0.833160	6.256195e-56	-8.615850e-47
Msa0377370	Msa1130680	0.864113	1.535280e-64	-8.615850e-47
Msa0377370	Msa1131030	0.848675	5.269440e-60	-8.615850e-47
Msa0377370	Msa1136880	0.841205	5.471693e-58	-8.615850e-47
Msa0377370	Msa1136980	0.818323	2.080947e-52	-8.615850e-47
Msa0377370	Msa1158630	0.814915	1.207829e-51	-8.615850e-47
Msa0377370	Msa1165210	0.819430	1.166041e-52	-8.615850e-47
Msa0377370	Msa1165640	0.809222	2.104657e-50	-8.615850e-47
Msa0377370	Msa1206240	0.803881	2.820790e-49	-8.615850e-47
Msa0377370	Msa1235950	0.870479	1.415032e-66	-8.615850e-47
Msa0377370	Msa1235980	0.867676	1.147808e-65	-8.615850e-47
Msa0377370	Msa1237040	0.850609	1.520703e-60	-8.615850e-47
Msa0377370	Msa1278130	0.808579	2.889830e-50	-8.615850e-47
Msa0377370	Msa1316100	0.826573	2.519321e-54	-8.615850e-47
Msa0377370	Msa1317390	0.825507	4.513705e-54	-8.615850e-47
Msa0377370	Msa1341780	0.861268	1.155733e-63	-8.615850e-47
Msa0377370	Msa1347610	0.806425	8.276930e-50	-8.615850e-47
Msa0377370	Msa1351020	0.849152	3.883533e-60	-8.615850e-47
Msa0377370	Msa1351910	0.821861	3.223277e-53	-8.615850e-47
Msa0377370	Msa1367540	0.812201	4.775694e-51	-8.615850e-47
Msa0377370	Msa1385480	0.851205	1.032610e-60	-8.615850e-47
Msa0377370	Msa1387750	0.804197	2.424543e-49	-8.615850e-47
Msa0377370	Msa1390760	0.823679	1.216752e-53	-8.615850e-47
Msa0377370	Msa1403520	0.832661	8.322860e-56	-8.615850e-47
Msa0377370	Msa1407550	0.841152	5.649714e-58	-8.615850e-47
Msa0377370	Msa1424570	0.816592	5.108929e-52	-8.615850e-47
Msa0377370	Msa1425070	0.848805	4.850543e-60	-8.615850e-47
Msa0377370	Msa1446410	0.800493	1.404361e-48	-8.615850e-47
Msa0377370	Msa1450560	0.845228	4.629338e-59	-8.615850e-47
Msa0377370	Msa1462580	0.837037	6.584509e-57	-8.615850e-47
Msa0377370	Msa1465700	0.858607	7.334951e-63	-8.615850e-47
Msa0270160	Msa0377370	0.856885	2.376322e-62	-8.615850e-47
Msa0274940	Msa0377370	0.808445	3.085809e-50	-8.615850e-47
Msa0277600	Msa0377370	0.857792	1.281911e-62	-8.615850e-47
Msa0281330	Msa0377370	0.856282	3.574457e-62	-8.615850e-47
Msa0281370	Msa0377370	0.854048	1.595440e-61	-8.615850e-47
Msa0301250	Msa0377370	0.886306	3.835092e-72	-8.615850e-47
Msa0313060	Msa0377370	0.896683	2.915254e-76	-8.615850e-47
Msa0315430	Msa0377370	0.840694	7.452828e-58	-8.615850e-47
Msa0315660	Msa0377370	0.831237	1.871011e-55	-8.615850e-47
Msa0340560	Msa0377370	0.807143	5.836110e-50	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377370	MtrunA17_Chr3g0129031	98.283	233	4	0	1	233	1	233	4.23e-167	460
Msa0377370	MtrunA17_Chr3g0129231	98.283	233	4	0	1	233	1	233	9.11e-167	459
Msa0377370	MtrunA17_Chr5g0448021	85.043	234	34	1	1	233	1	234	7.53e-142	396
Msa0377370	MtrunA17_Chr8g0383131	86.391	169	22	1	1	168	1	169	1.33e-101	293

Query id	Subject id	identity %	alignment length	mismatches	q. start	q. end	s. start	s. end	e-value	bit score
Msa0377370	AT1G74060.1	79.828	233	47	1	233	1	233	6.39e-121	343
Msa0377370	AT1G74050.1	79.828	233	47	1	233	1	233	1.32e-120	343
Msa0377370	AT1G18540.1	78.112	233	51	1	233	1	233	8.52e-114	325

Find 82 sgRNAs with CRISPR-Local

Find 245 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTCTTGCTGGAAGATTTA+AGG	0.132093	3_1:-77788534	Msa0377370:CDS
TTTCTTAAACAGCTTCCTTC+TGG	0.245821	3_1:-77788497	Msa0377370:CDS
TTAGGTCCATTCAAGATTAA+TGG	0.250233	3_1:-77786826	Msa0377370:intron
AACCTGAGCTTAGTGGGTTT+TGG	0.276883	3_1:+77789307	None:intergenic
GGCTTCTCGGCCGGAGCTGC+AGG	0.292400	3_1:+77789385	None:intergenic
CAAGAGGACAAAATATATTA+AGG	0.311546	3_1:+77786268	None:intergenic
CTTCTTGCTGGAAGATTTAA+GGG	0.311988	3_1:-77788533	Msa0377370:CDS
TCTGGACTTCTTCTCGTTAC+CGG	0.334203	3_1:-77788479	Msa0377370:intron
GGCTTCTTCACGTCGTCGGC+GGG	0.353564	3_1:+77789349	None:intergenic
TGGCTTCACACCTGCCTTCA+AGG	0.355239	3_1:+77786449	None:intergenic
CCCCTTGAGACGTGTGAATC+AGG	0.357560	3_1:-77786800	Msa0377370:CDS
GTATGGTATGCCAGCAATAA+AGG	0.357845	3_1:+77786220	None:intergenic
TGTATCACAAACGTGGTCTC+TGG	0.360563	3_1:-77789462	Msa0377370:CDS
CGAGTTCTTTGAGGCAGATA+AGG	0.375748	3_1:-77786665	Msa0377370:CDS
CAAGTCTGGAACACTGTCAA+TGG	0.377541	3_1:+77786497	None:intergenic
ACAGTGTTGATTCTTCTTGC+TGG	0.383364	3_1:-77788545	Msa0377370:CDS
CCGATACCCCTGATCAAGTC+AGG	0.389802	3_1:+77789505	None:intergenic
GCCGTAACCCTGACTTGATC+AGG	0.402373	3_1:-77789513	Msa0377370:CDS
TTCAGGGCTTCTATTACTCC+AGG	0.405045	3_1:-77788569	Msa0377370:intron
GTGAATCAGGCTTATGTTAT+CGG	0.407883	3_1:-77786787	Msa0377370:CDS
TGCCATTGCTGTTGGTGTGA+TGG	0.424214	3_1:+77789561	None:intergenic
AAAAGCATTGTCTTCAACTA+GGG	0.425787	3_1:-77789619	Msa0377370:five_prime_UTR
GCCATTGCTGTTGGTGTGAT+GGG	0.428031	3_1:+77789562	None:intergenic
CAAAAGCATTGTCTTCAACT+AGG	0.442339	3_1:-77789620	Msa0377370:five_prime_UTR
AACCGAAGAAATATCTACTT+TGG	0.446745	3_1:+77786756	None:intergenic
TACCAAAGTAGATATTTCTT+CGG	0.451633	3_1:-77786758	Msa0377370:CDS
AACTTAGGTGGCTTCTCGGC+CGG	0.473552	3_1:+77789376	None:intergenic
AGAAGAATCAACACTGTCCC+TGG	0.473766	3_1:+77788551	None:intergenic
GATCATCTTTCTTCTCCTGA+GGG	0.477455	3_1:+77786550	None:intergenic
TCTTCAACTAGGGTTTAGAC+AGG	0.481239	3_1:-77789609	Msa0377370:five_prime_UTR
CGTCGCTAAGCCTGCAGCTC+CGG	0.482998	3_1:-77789395	Msa0377370:CDS
TTGCTGTTGGTGTGATGGGA+TGG	0.483392	3_1:+77789566	None:intergenic
CCTGACTTGATCAGGGGTAT+CGG	0.491288	3_1:-77789505	Msa0377370:CDS
GGGACTCCATTAATCTTGAA+TGG	0.491418	3_1:+77786820	None:intergenic
TGATCATCTTTCTTCTCCTG+AGG	0.494574	3_1:+77786549	None:intergenic
TGAAAACTTACCTAGGTGCC+AGG	0.495019	3_1:-77786476	Msa0377370:CDS
CACATGAGTTGGTCTTCTAA+AGG	0.499867	3_1:-77786428	Msa0377370:exon
GTAAAACTTAGGTGGCTTCT+CGG	0.500498	3_1:+77789372	None:intergenic
GGGAGAGAGCGAGTTCTTTG+AGG	0.505471	3_1:-77786674	Msa0377370:CDS
ACGTGGTCTCTGGGCAATCA+AGG	0.510085	3_1:-77789452	Msa0377370:CDS
ACCTGCCTTCAAGGAAAACC+TGG	0.516282	3_1:+77786458	None:intergenic
GGTGACGAACCTGAGCTTAG+TGG	0.517641	3_1:+77789300	None:intergenic
TGGCTTCTTCACGTCGTCGG+CGG	0.523746	3_1:+77789348	None:intergenic
CCCTGATCAAGTCAGGGTTA+CGG	0.525127	3_1:+77789512	None:intergenic
CGGAGCTGCAGGCTTAGCGA+CGG	0.526524	3_1:+77789396	None:intergenic
GTATCACAAACGTGGTCTCT+GGG	0.530303	3_1:-77789461	Msa0377370:CDS
AGCCTGATTCACACGTCTCA+AGG	0.531824	3_1:+77786798	None:intergenic
GATCAAAAGACTGTCGATGC+TGG	0.534143	3_1:-77786531	Msa0377370:CDS
GGAGCTGCAGGCTTAGCGAC+GGG	0.545817	3_1:+77789397	None:intergenic
GTGACGAACCTGAGCTTAGT+GGG	0.562791	3_1:+77789301	None:intergenic
TCGTCGGCGGGGTAAAACTT+AGG	0.563807	3_1:+77789361	None:intergenic
GCCTGATTCACACGTCTCAA+GGG	0.568583	3_1:+77786799	None:intergenic
CAGGCTTAGCGACGGGATCG+TGG	0.569427	3_1:+77789404	None:intergenic
CCGTAACCCTGACTTGATCA+GGG	0.572652	3_1:-77789512	Msa0377370:CDS
ATAAAACCAAATGGTTCAAG+AGG	0.575071	3_1:+77786252	None:intergenic
TAGCGACGGGATCGTGGCGA+GGG	0.582049	3_1:+77789410	None:intergenic
AGCCAAAACCCACTAAGCTC+AGG	0.582122	3_1:-77789309	Msa0377370:intron
TCCCATCACACCAACAGCAA+TGG	0.582560	3_1:-77789563	Msa0377370:exon
GAGTGGCTTCTTCACGTCGT+CGG	0.583036	3_1:+77789345	None:intergenic
TCAAGGAAAACCTGGCACCT+AGG	0.589414	3_1:+77786466	None:intergenic
GGCTTGTGCTTGTTGCGGAG+TGG	0.594085	3_1:+77789328	None:intergenic
TGATGACAAGTACTTCTCAA+AGG	0.595456	3_1:-77786719	Msa0377370:CDS
TTAGCGACGGGATCGTGGCG+AGG	0.595917	3_1:+77789409	None:intergenic
CCAGACTTGAAAACTTACCT+AGG	0.601511	3_1:-77786483	Msa0377370:CDS
AACTAGGGTTTAGACAGGGA+GGG	0.602585	3_1:-77789604	Msa0377370:five_prime_UTR
CGATACCCCTGATCAAGTCA+GGG	0.606077	3_1:+77789506	None:intergenic
CTTTAGAAGACCAACTCATG+TGG	0.608084	3_1:+77786429	None:intergenic
AGGTGTGAAGCCACATGAGT+TGG	0.608147	3_1:-77786439	Msa0377370:CDS
GTTCTTTGAGGCAGATAAGG+AGG	0.609313	3_1:-77786662	Msa0377370:intron
GTAACGAGAAGAAGTCCAGA+AGG	0.620622	3_1:+77788482	None:intergenic
TAGGGTTTAGACAGGGAGGG+AGG	0.622216	3_1:-77789601	Msa0377370:five_prime_UTR
TCAGGGCTTCTATTACTCCA+GGG	0.623428	3_1:-77788568	Msa0377370:intron
GCTTCTTCACGTCGTCGGCG+GGG	0.624269	3_1:+77789350	None:intergenic
CTTCAACTAGGGTTTAGACA+GGG	0.626670	3_1:-77789608	Msa0377370:five_prime_UTR
AGGGTTACGGCTCACTCTTG+CGG	0.626952	3_1:+77789525	None:intergenic
CCTGATTCACACGTCTCAAG+GGG	0.635856	3_1:+77786800	None:intergenic
TCGGCGGGGTAAAACTTAGG+TGG	0.637875	3_1:+77789364	None:intergenic
TGGGCAATCAAGGCTAAGCA+CGG	0.658739	3_1:-77789442	Msa0377370:CDS
CAACTAGGGTTTAGACAGGG+AGG	0.664353	3_1:-77789605	Msa0377370:five_prime_UTR
CGTAACCCTGACTTGATCAG+GGG	0.675659	3_1:-77789511	Msa0377370:CDS
GCAATCAAGGCTAAGCACGG+TGG	0.725321	3_1:-77789439	Msa0377370:CDS
TCTGCTATGTATCACAAACG+TGG	0.741302	3_1:-77789469	Msa0377370:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	TTAATATTTATAATTACAGA+TGG	-	chr3_1:77786822-77786841	Msa0377370:CDS	10.0%
!!	TATTGTCATATAAAATAATT+TGG	-	chr3_1:77787378-77787397	Msa0377370:intron	10.0%
!!!	AAATTTTATATGATATCTTC+AGG	-	chr3_1:77786566-77786585	Msa0377370:CDS	15.0%
!!	ACAATTGTATATCTAATTAA+TGG	+	chr3_1:77786752-77786771	None:intergenic	15.0%
!!	CTCAAAATTAGAATAAAAAA+GGG	+	chr3_1:77787023-77787042	None:intergenic	15.0%
!!	TCTCAAAATTAGAATAAAAA+AGG	+	chr3_1:77787024-77787043	None:intergenic	15.0%
!!	TTTCTTAAAACAATAATTAC+CGG	+	chr3_1:77787294-77787313	None:intergenic	15.0%
!!!	TATATTTGTTTGTTGTATTA+TGG	-	chr3_1:77787353-77787372	Msa0377370:intron	15.0%
!!!	ATATTTGTTTGTTGTATTAT+GGG	-	chr3_1:77787354-77787373	Msa0377370:intron	15.0%
!!	ATGTAAAGACTAAAAATATA+AGG	-	chr3_1:77787769-77787788	Msa0377370:intron	15.0%
!!!	AAATAGAAAATCTAGAATTA+TGG	+	chr3_1:77787839-77787858	None:intergenic	15.0%
!!!	ATAATTCTAGATTTTCTATT+TGG	-	chr3_1:77787838-77787857	Msa0377370:intron	15.0%
!!!	GACTAATTTTTTAATTCTTT+GGG	-	chr3_1:77787933-77787952	Msa0377370:intron	15.0%
!!!	ACTAATTTTTTAATTCTTTG+GGG	-	chr3_1:77787934-77787953	Msa0377370:intron	15.0%
!!	TATTTATTTATAGTTTCAAG+TGG	+	chr3_1:77787981-77788000	None:intergenic	15.0%
!!	ATTGATATGTTAAGATTAAA+AGG	-	chr3_1:77788015-77788034	Msa0377370:intron	15.0%
!!!	ATATACATTTTTTGTTTAGT+AGG	-	chr3_1:77788169-77788188	Msa0377370:intron	15.0%
!!!	AATTTTTAGAAATATTAGGA+TGG	+	chr3_1:77788234-77788253	None:intergenic	15.0%
!!!	CATGAATTTTTAGAAATATT+AGG	+	chr3_1:77788238-77788257	None:intergenic	15.0%
!!	TTAAAATTAAGAATCAAGTT+GGG	+	chr3_1:77788306-77788325	None:intergenic	15.0%
!!	ATTAAAATTAAGAATCAAGT+TGG	+	chr3_1:77788307-77788326	None:intergenic	15.0%
!!	AAAAAATCAATGATTTAACT+TGG	-	chr3_1:77788503-77788522	Msa0377370:CDS	15.0%
!!	AAAGATATTATTAAGTGTAT+TGG	+	chr3_1:77788736-77788755	None:intergenic	15.0%
!!!	ATAATTATAGTTGTTTTATC+TGG	-	chr3_1:77788796-77788815	Msa0377370:intron	15.0%
!!!	TAATTATAGTTGTTTTATCT+GGG	-	chr3_1:77788797-77788816	Msa0377370:intron	15.0%
!!	CTAAAAATAATAAAACCAAA+TGG	+	chr3_1:77789511-77789530	None:intergenic	15.0%
!!	AATATAGAAACTGTTGATAT+TGG	-	chr3_1:77786949-77786968	Msa0377370:intron	20.0%
!!!	TTGTTATACTACCTTTATTT+TGG	-	chr3_1:77787052-77787071	Msa0377370:intron	20.0%
!!	ATTTATCAGATCCAAAATAA+AGG	+	chr3_1:77787066-77787085	None:intergenic	20.0%
!!	ATAAATCATTCAATTTGACA+AGG	+	chr3_1:77787144-77787163	None:intergenic	20.0%
!!	GTCAAATTGAATGATTTATT+TGG	-	chr3_1:77787145-77787164	Msa0377370:intron	20.0%
!!!	TGCTTATTTAAAGTTTGTTT+CGG	-	chr3_1:77787435-77787454	Msa0377370:intron	20.0%
!!!	TGTATTTGGTAACTATTATT+TGG	-	chr3_1:77787461-77787480	Msa0377370:intron	20.0%
!!	AATATAAGGTAGTACATTTA+TGG	-	chr3_1:77787783-77787802	Msa0377370:intron	20.0%
!!!	GGACTAATTTTTTAATTCTT+TGG	-	chr3_1:77787932-77787951	Msa0377370:intron	20.0%
!!	TAATCTTAACATATCAATCA+AGG	+	chr3_1:77788013-77788032	None:intergenic	20.0%
!!!	ATTTCTAAAAATTCATGTAG+AGG	-	chr3_1:77788241-77788260	Msa0377370:intron	20.0%
!!!	TAAAATTAAGAATCAAGTTG+GGG	+	chr3_1:77788305-77788324	None:intergenic	20.0%
!!!	TTTTAATTGCACTGTTTATT+AGG	-	chr3_1:77788320-77788339	Msa0377370:intron	20.0%
!!!	TAAACCTACTTTTTTTATCT+GGG	-	chr3_1:77788561-77788580	Msa0377370:CDS	20.0%
!!	TTATGCTCTATTTATTTCAA+TGG	-	chr3_1:77788631-77788650	Msa0377370:intron	20.0%
!!	TATGCTCTATTTATTTCAAT+GGG	-	chr3_1:77788632-77788651	Msa0377370:intron	20.0%
!!!	TTAATAATATCTTTTGCTCA+TGG	-	chr3_1:77788742-77788761	Msa0377370:intron	20.0%
!!!	TTGTTTTTTGCTTGTTATTT+TGG	-	chr3_1:77789365-77789384	Msa0377370:CDS	20.0%
!!!	AACATAGAATACAAGTTTTT+CGG	+	chr3_1:77789451-77789470	None:intergenic	20.0%
!	TTATCAGTAGAAATGAACAA+TGG	+	chr3_1:77786475-77786494	None:intergenic	25.0%
!	CTCAAAATTGCAACAAAAAA+AGG	+	chr3_1:77786499-77786518	None:intergenic	25.0%
!	TTTATATGATATCTTCAGGT+TGG	-	chr3_1:77786570-77786589	Msa0377370:intron	25.0%
!!!	TTGTTTTGTCTGTTAAAACT+GGG	-	chr3_1:77786639-77786658	Msa0377370:intron	25.0%
!!!	AAGATGTGGTGTTTTTTTAA+TGG	-	chr3_1:77786705-77786724	Msa0377370:CDS	25.0%
!	TAGATATACAATTGTATCCA+AGG	-	chr3_1:77786757-77786776	Msa0377370:CDS	25.0%
!	TATTTATAATTACAGATGGC+TGG	-	chr3_1:77786826-77786845	Msa0377370:intron	25.0%
!!!	TAGTTGTAAAGTTTTGGAAA+TGG	+	chr3_1:77786876-77786895	None:intergenic	25.0%
!!	ACAGTTTAGTTGTAAAGTTT+TGG	+	chr3_1:77786882-77786901	None:intergenic	25.0%
!	CAGTTATATACATAAAATGC+TGG	+	chr3_1:77787331-77787350	None:intergenic	25.0%
!	TTTCCATTGAAAATTACATG+AGG	-	chr3_1:77787550-77787569	Msa0377370:intron	25.0%
!	TAAAAGCTATGTAAAGAAGT+TGG	-	chr3_1:77787664-77787683	Msa0377370:intron	25.0%
!	ATTATGGTCTGCAATATAAA+AGG	+	chr3_1:77787823-77787842	None:intergenic	25.0%
!	CAACAAAGAAAACGATAATT+GGG	-	chr3_1:77787911-77787930	Msa0377370:intron	25.0%
!	GTGGATCAATATGTAATTAA+AGG	+	chr3_1:77787962-77787981	None:intergenic	25.0%
!	GTAAATTAAGACTAGAGATT+AGG	-	chr3_1:77788079-77788098	Msa0377370:intron	25.0%
!	GAAAGATATTAGTATTACCA+TGG	+	chr3_1:77788210-77788229	None:intergenic	25.0%
!!	TATACATTTTCATCACACTA+TGG	+	chr3_1:77788472-77788491	None:intergenic	25.0%
!!!	CTAAACCTACTTTTTTTATC+TGG	-	chr3_1:77788560-77788579	Msa0377370:CDS	25.0%
!	AATAAATAGAGCATAACCTA+TGG	+	chr3_1:77788627-77788646	None:intergenic	25.0%
!	TACCAAAGTAGATATTTCTT+CGG	-	chr3_1:77788993-77789012	Msa0377370:intron	25.0%
!!!	TGTTTGTTGAGTTGATATTT+TGG	-	chr3_1:77789114-77789133	Msa0377370:intron	25.0%
!!!	TTACAATGCTTTTGCTTTTT+AGG	-	chr3_1:77789165-77789184	Msa0377370:intron	25.0%
!!!	TTTTGCTTTTTAGGACAAAA+AGG	-	chr3_1:77789174-77789193	Msa0377370:intron	25.0%
!	CAAGAGGACAAAATATATTA+AGG	+	chr3_1:77789486-77789505	None:intergenic	25.0%
!!!	TTATTTTTAGCCTTTATTGC+TGG	-	chr3_1:77789521-77789540	Msa0377370:CDS	25.0%
!!!	TTTGTTGTTTGAAATCAGTA+TGG	+	chr3_1:77789551-77789570	None:intergenic	25.0%
!!!	TACTGATTTCAAACAACAAA+AGG	-	chr3_1:77789551-77789570	Msa0377370:exon	25.0%
!!	ACTGATTTCAAACAACAAAA+GGG	-	chr3_1:77789552-77789571	Msa0377370:exon	25.0%
!!	AAAAGCATTGTCTTCAACTA+GGG	-	chr3_1:77786132-77786151	Msa0377370:three_prime_UTR	30.0%
	TAACAGATCCAAAATAAACG+TGG	+	chr3_1:77786528-77786547	None:intergenic	30.0%
	AATCACAATAACTCCACAAA+GGG	+	chr3_1:77786613-77786632	None:intergenic	30.0%
!!!	CTTGTTTTGTCTGTTAAAAC+TGG	-	chr3_1:77786638-77786657	Msa0377370:intron	30.0%
	TGATGACTGAGTTAATATAG+TGG	-	chr3_1:77786794-77786813	Msa0377370:CDS	30.0%
	TAGAAACTGTTGATATTGGT+AGG	-	chr3_1:77786953-77786972	Msa0377370:intron	30.0%
	TCAATAGAATTGAAAAACGC+TGG	+	chr3_1:77786996-77787015	None:intergenic	30.0%
	TGAATGATTTATTTGGTACC+TGG	-	chr3_1:77787152-77787171	Msa0377370:intron	30.0%
	GTTTGTTTCGGATTTGTATT+TGG	-	chr3_1:77787447-77787466	Msa0377370:intron	30.0%
!	ACACCTCATGTAATTTTCAA+TGG	+	chr3_1:77787556-77787575	None:intergenic	30.0%
	TTAGTGGTTACTTATAGGAA+AGG	+	chr3_1:77787592-77787611	None:intergenic	30.0%
	AACTCTTAGTGGTTACTTAT+AGG	+	chr3_1:77787597-77787616	None:intergenic	30.0%
	CTAAACATTTCAACTCTTAG+TGG	+	chr3_1:77787608-77787627	None:intergenic	30.0%
!!!	AGGTTGGTTTTTTTCAAAAC+AGG	+	chr3_1:77787699-77787718	None:intergenic	30.0%
	AACAGGTCAAACAATAACTA+AGG	+	chr3_1:77787719-77787738	None:intergenic	30.0%
!	CTATTTGGTTTCTTGTACTT+TGG	-	chr3_1:77787853-77787872	Msa0377370:intron	30.0%
!	CCAATTATCGTTTTCTTTGT+TGG	+	chr3_1:77787913-77787932	None:intergenic	30.0%
	CCAACAAAGAAAACGATAAT+TGG	-	chr3_1:77787910-77787929	Msa0377370:intron	30.0%
	TATAACTTTACCAACTTCCA+TGG	-	chr3_1:77788052-77788071	Msa0377370:intron	30.0%
	AGTATGTTCAAATCTAGAGA+CGG	+	chr3_1:77788354-77788373	None:intergenic	30.0%
	AGACATGACAATATCGAATT+TGG	-	chr3_1:77788401-77788420	Msa0377370:intron	30.0%
	ATGACAATATCGAATTTGGT+TGG	-	chr3_1:77788405-77788424	Msa0377370:intron	30.0%
	ACATCCCAGATAAAAAAAGT+AGG	+	chr3_1:77788568-77788587	None:intergenic	30.0%
	GGGATGTGTTTAAATATACT+AGG	-	chr3_1:77788581-77788600	Msa0377370:intron	30.0%
	ATTAATCTTGAATGGACCTA+AGG	+	chr3_1:77788926-77788945	None:intergenic	30.0%
	TTAGGTCCATTCAAGATTAA+TGG	-	chr3_1:77788925-77788944	Msa0377370:intron	30.0%
	AACCGAAGAAATATCTACTT+TGG	+	chr3_1:77788998-77789017	None:intergenic	30.0%
!!	TTTTGGTTGTTTGTCAAACT+AGG	-	chr3_1:77789382-77789401	Msa0377370:CDS	30.0%
	ATAAAACCAAATGGTTCAAG+AGG	+	chr3_1:77789502-77789521	None:intergenic	30.0%
!!	CAAAAGCATTGTCTTCAACT+AGG	-	chr3_1:77786131-77786150	Msa0377370:three_prime_UTR	35.0%
!	AGTAACTGCCACGTTTATTT+TGG	-	chr3_1:77786517-77786536	Msa0377370:CDS	35.0%
	GAAATTTAATTCCCCCTTTG+TGG	-	chr3_1:77786597-77786616	Msa0377370:intron	35.0%
	ATCACAATAACTCCACAAAG+GGG	+	chr3_1:77786612-77786631	None:intergenic	35.0%
	GAATCACAATAACTCCACAA+AGG	+	chr3_1:77786614-77786633	None:intergenic	35.0%
!	TTTTGTCTGTTAAAACTGGG+TGG	-	chr3_1:77786642-77786661	Msa0377370:intron	35.0%
	GCTGATGTTTGATTAAGATG+TGG	-	chr3_1:77786691-77786710	Msa0377370:CDS	35.0%
	ATATTAGTTGCTACCAATGC+TGG	+	chr3_1:77786934-77786953	None:intergenic	35.0%
	GCAATCAGTCAAAAAACAAG+AGG	+	chr3_1:77787122-77787141	None:intergenic	35.0%
	TCTTCTTGCTGGAAGATTTA+AGG	-	chr3_1:77787217-77787236	Msa0377370:intron	35.0%
	CTTCTTGCTGGAAGATTTAA+GGG	-	chr3_1:77787218-77787237	Msa0377370:intron	35.0%
	TTTCTTAAACAGCTTCCTTC+TGG	-	chr3_1:77787254-77787273	Msa0377370:intron	35.0%
	TGAAAATTACATGAGGTGTG+TGG	-	chr3_1:77787557-77787576	Msa0377370:intron	35.0%
	GGTCAAACAATAACTAAGGT+TGG	+	chr3_1:77787715-77787734	None:intergenic	35.0%
	AAGCATAGCGTTACAAAAAC+AGG	+	chr3_1:77787736-77787755	None:intergenic	35.0%
	AGTCTTAATTTACACCTCCA+TGG	+	chr3_1:77788072-77788091	None:intergenic	35.0%
	CCTGTGACAAGCATATTAAT+AGG	+	chr3_1:77788128-77788147	None:intergenic	35.0%
	CCTATTAATATGCTTGTCAC+AGG	-	chr3_1:77788125-77788144	Msa0377370:intron	35.0%
	GGTCAGAGTAAAAAATTCCA+TGG	-	chr3_1:77788190-77788209	Msa0377370:intron	35.0%
!!	TCAAATCTAGAGACGGATTA+GGG	+	chr3_1:77788347-77788366	None:intergenic	35.0%
!	TTCAAATCTAGAGACGGATT+AGG	+	chr3_1:77788348-77788367	None:intergenic	35.0%
	CTAGATTTGAACATACTCGA+TGG	-	chr3_1:77788357-77788376	Msa0377370:intron	35.0%
	CGATGGTCTATTAGTGAAAT+AGG	-	chr3_1:77788374-77788393	Msa0377370:intron	35.0%
	ATTCATCACACTAAGGTAAG+AGG	+	chr3_1:77788433-77788452	None:intergenic	35.0%
	CAACTCAATTCATCACACTA+AGG	+	chr3_1:77788440-77788459	None:intergenic	35.0%
	TGGAGATGTATAACTAGGTT+TGG	+	chr3_1:77788607-77788626	None:intergenic	35.0%
	ACCTAGTTATACATCTCCAT+AGG	-	chr3_1:77788608-77788627	Msa0377370:intron	35.0%
	ACCTATGGAGATGTATAACT+AGG	+	chr3_1:77788612-77788631	None:intergenic	35.0%
	GTTAACTCAATCATCATCTG+TGG	+	chr3_1:77788675-77788694	None:intergenic	35.0%
	GAAGATTTGTCAAAGATGAG+TGG	+	chr3_1:77788885-77788904	None:intergenic	35.0%
	TTGTTCACTCTCATTACCTT+AGG	-	chr3_1:77788907-77788926	Msa0377370:intron	35.0%
	GTGAATCAGGCTTATGTTAT+CGG	-	chr3_1:77788964-77788983	Msa0377370:intron	35.0%
	TGATGACAAGTACTTCTCAA+AGG	-	chr3_1:77789032-77789051	Msa0377370:intron	35.0%
!	TTTTGTCCTCTTGAACCATT+TGG	-	chr3_1:77789493-77789512	Msa0377370:CDS	35.0%
!!!	TCAGTTTTGCAAAGTACTGA+AGG	+	chr3_1:77789592-77789611	None:intergenic	35.0%
	TCTTCAACTAGGGTTTAGAC+AGG	-	chr3_1:77786142-77786161	Msa0377370:three_prime_UTR	40.0%
	CTTCAACTAGGGTTTAGACA+GGG	-	chr3_1:77786143-77786162	Msa0377370:three_prime_UTR	40.0%
!!!	ACTCTTGCGGTTCTTGTTTT+TGG	+	chr3_1:77786216-77786235	None:intergenic	40.0%
	TCTGCTATGTATCACAAACG+TGG	-	chr3_1:77786282-77786301	Msa0377370:three_prime_UTR	40.0%
	GTAAAACTTAGGTGGCTTCT+CGG	+	chr3_1:77786382-77786401	None:intergenic	40.0%
	TCACAATAACTCCACAAAGG+GGG	+	chr3_1:77786611-77786630	None:intergenic	40.0%
	TTTCTTCCTGCATTAGTGCT+GGG	-	chr3_1:77786669-77786688	Msa0377370:CDS	40.0%
!!	TGAAGAAAGAGTACCAGCAT+TGG	-	chr3_1:77786918-77786937	Msa0377370:intron	40.0%
	TATTGGTAGGAACTAAGCTC+AGG	-	chr3_1:77786966-77786985	Msa0377370:intron	40.0%
!!	TGGTACCTGGATTTGTTTTC+AGG	-	chr3_1:77787165-77787184	Msa0377370:intron	40.0%
!!	GGTACCTGGATTTGTTTTCA+GGG	-	chr3_1:77787166-77787185	Msa0377370:intron	40.0%
!!	ACAGTGTTGATTCTTCTTGC+TGG	-	chr3_1:77787206-77787225	Msa0377370:intron	40.0%
	GCTATGTAAAGAAGTTGGAC+AGG	-	chr3_1:77787669-77787688	Msa0377370:intron	40.0%
	GGTAGTACATTTATGGATGC+AGG	-	chr3_1:77787790-77787809	Msa0377370:intron	40.0%
	AACTTTACCAACTTCCATGG+AGG	-	chr3_1:77788055-77788074	Msa0377370:intron	40.0%
	ATTTACACCTCCATGGAAGT+TGG	+	chr3_1:77788065-77788084	None:intergenic	40.0%
	TGTCCGAACTTGAACTTTAC+TGG	-	chr3_1:77788102-77788121	Msa0377370:intron	40.0%
!	AGGCCAGTAAAGTTCAAGTT+CGG	+	chr3_1:77788108-77788127	None:intergenic	40.0%
	TTTCCATTGTGTATGTCCAC+TGG	-	chr3_1:77788533-77788552	Msa0377370:CDS	40.0%
	CTCATGGTTTCCATTGTCTA+TGG	-	chr3_1:77788758-77788777	Msa0377370:intron	40.0%
	ATGCAAGTGACCATAGACAA+TGG	+	chr3_1:77788771-77788790	None:intergenic	40.0%
	GATTTGTCAAAGATGAGTGG+AGG	+	chr3_1:77788882-77788901	None:intergenic	40.0%
	GGGACTCCATTAATCTTGAA+TGG	+	chr3_1:77788934-77788953	None:intergenic	40.0%
	ATCCCAGAAAAAGACGAAGA+AGG	-	chr3_1:77789056-77789075	Msa0377370:intron	40.0%
	TCCCAGAAAAAGACGAAGAA+GGG	-	chr3_1:77789057-77789076	Msa0377370:intron	40.0%
!	TCCCTTCTTCGTCTTTTTCT+GGG	+	chr3_1:77789061-77789080	None:intergenic	40.0%
	GATCATCTTTCTTCTCCTGA+GGG	+	chr3_1:77789204-77789223	None:intergenic	40.0%
	TGATCATCTTTCTTCTCCTG+AGG	+	chr3_1:77789205-77789224	None:intergenic	40.0%
!!!	CCTAGGTAAGTTTTCAAGTC+TGG	+	chr3_1:77789271-77789290	None:intergenic	40.0%
	CCAGACTTGAAAACTTACCT+AGG	-	chr3_1:77789268-77789287	Msa0377370:intron	40.0%
!	CTTTAGAAGACCAACTCATG+TGG	+	chr3_1:77789325-77789344	None:intergenic	40.0%
!!	CACATGAGTTGGTCTTCTAA+AGG	-	chr3_1:77789323-77789342	Msa0377370:CDS	40.0%
	GTATGGTATGCCAGCAATAA+AGG	+	chr3_1:77789534-77789553	None:intergenic	40.0%
	AACTAGGGTTTAGACAGGGA+GGG	-	chr3_1:77786147-77786166	Msa0377370:three_prime_UTR	45.0%
!!!	GTTTTTGGTGCCATTGCTGT+TGG	+	chr3_1:77786201-77786220	None:intergenic	45.0%
	TGTATCACAAACGTGGTCTC+TGG	-	chr3_1:77786289-77786308	Msa0377370:three_prime_UTR	45.0%
	GTATCACAAACGTGGTCTCT+GGG	-	chr3_1:77786290-77786309	Msa0377370:three_prime_UTR	45.0%
!!!	GTTTTGGCTTGTGCTTGTTG+CGG	+	chr3_1:77786431-77786450	None:intergenic	45.0%
!!!	AACCTGAGCTTAGTGGGTTT+TGG	+	chr3_1:77786447-77786466	None:intergenic	45.0%
	TGTCTGTTAAAACTGGGTGG+TGG	-	chr3_1:77786645-77786664	Msa0377370:intron	45.0%
	GTCTGTTAAAACTGGGTGGT+GGG	-	chr3_1:77786646-77786665	Msa0377370:intron	45.0%
	GTTTCTTCCTGCATTAGTGC+TGG	-	chr3_1:77786668-77786687	Msa0377370:CDS	45.0%
	GAAGCCCTGAAAACAAATCC+AGG	+	chr3_1:77787173-77787192	None:intergenic	45.0%
	TTCAGGGCTTCTATTACTCC+AGG	-	chr3_1:77787182-77787201	Msa0377370:intron	45.0%
	TCAGGGCTTCTATTACTCCA+GGG	-	chr3_1:77787183-77787202	Msa0377370:intron	45.0%
	AGAAGAATCAACACTGTCCC+TGG	+	chr3_1:77787203-77787222	None:intergenic	45.0%
	GTAACGAGAAGAAGTCCAGA+AGG	+	chr3_1:77787272-77787291	None:intergenic	45.0%
	TCTGGACTTCTTCTCGTTAC+CGG	-	chr3_1:77787272-77787291	Msa0377370:intron	45.0%
	AGGTGAGCAGAGTTATGTGT+TGG	-	chr3_1:77788261-77788280	Msa0377370:intron	45.0%
	TGAGCAGAGTTATGTGTTGG+AGG	-	chr3_1:77788264-77788283	Msa0377370:intron	45.0%
	ATGCCAGTGGACATACACAA+TGG	+	chr3_1:77788539-77788558	None:intergenic	45.0%
	AAGTAGGTTTAGCATGCCAG+TGG	+	chr3_1:77788552-77788571	None:intergenic	45.0%
!	CTCCCTTCTTCGTCTTTTTC+TGG	+	chr3_1:77789062-77789081	None:intergenic	45.0%
!!	CGAGTTCTTTGAGGCAGATA+AGG	-	chr3_1:77789086-77789105	Msa0377370:intron	45.0%
!!	GTTCTTTGAGGCAGATAAGG+AGG	-	chr3_1:77789089-77789108	Msa0377370:intron	45.0%
	GATCAAAAGACTGTCGATGC+TGG	-	chr3_1:77789220-77789239	Msa0377370:intron	45.0%
!	CAAGTCTGGAACACTGTCAA+TGG	+	chr3_1:77789257-77789276	None:intergenic	45.0%
	TGAAAACTTACCTAGGTGCC+AGG	-	chr3_1:77789275-77789294	Msa0377370:intron	45.0%
	CAACTAGGGTTTAGACAGGG+AGG	-	chr3_1:77786146-77786165	Msa0377370:three_prime_UTR	50.0%
!	TTGCTGTTGGTGTGATGGGA+TGG	+	chr3_1:77786188-77786207	None:intergenic	50.0%
	TCCCATCACACCAACAGCAA+TGG	-	chr3_1:77786188-77786207	Msa0377370:intron	50.0%
!	GCCATTGCTGTTGGTGTGAT+GGG	+	chr3_1:77786192-77786211	None:intergenic	50.0%
!	TGCCATTGCTGTTGGTGTGA+TGG	+	chr3_1:77786193-77786212	None:intergenic	50.0%
	CCCTGATCAAGTCAGGGTTA+CGG	+	chr3_1:77786242-77786261	None:intergenic	50.0%
!	CCGTAACCCTGACTTGATCA+GGG	-	chr3_1:77786239-77786258	Msa0377370:three_prime_UTR	50.0%
!	CGTAACCCTGACTTGATCAG+GGG	-	chr3_1:77786240-77786259	Msa0377370:three_prime_UTR	50.0%
	CGATACCCCTGATCAAGTCA+GGG	+	chr3_1:77786248-77786267	None:intergenic	50.0%
!	CCTGACTTGATCAGGGGTAT+CGG	-	chr3_1:77786246-77786265	Msa0377370:three_prime_UTR	50.0%
	TGGGCAATCAAGGCTAAGCA+CGG	-	chr3_1:77786309-77786328	Msa0377370:three_prime_UTR	50.0%
	AGCCAAAACCCACTAAGCTC+AGG	-	chr3_1:77786442-77786461	Msa0377370:CDS	50.0%
	GTGACGAACCTGAGCTTAGT+GGG	+	chr3_1:77786453-77786472	None:intergenic	50.0%
	TCAACAAGCTGAACGAGCCT+TGG	+	chr3_1:77786777-77786796	None:intergenic	50.0%
	CCTGATTCACACGTCTCAAG+GGG	+	chr3_1:77788954-77788973	None:intergenic	50.0%
	GCCTGATTCACACGTCTCAA+GGG	+	chr3_1:77788955-77788974	None:intergenic	50.0%
	AGCCTGATTCACACGTCTCA+AGG	+	chr3_1:77788956-77788975	None:intergenic	50.0%
	TCAAGGAAAACCTGGCACCT+AGG	+	chr3_1:77789288-77789307	None:intergenic	50.0%
!	AGGTGCCAGGTTTTCCTTGA+AGG	-	chr3_1:77789288-77789307	Msa0377370:intron	50.0%
	ACCTGCCTTCAAGGAAAACC+TGG	+	chr3_1:77789296-77789315	None:intergenic	50.0%
	AGGTGTGAAGCCACATGAGT+TGG	-	chr3_1:77789312-77789331	Msa0377370:CDS	50.0%
	TAGGGTTTAGACAGGGAGGG+AGG	-	chr3_1:77786150-77786169	Msa0377370:three_prime_UTR	55.0%
	AGGGTTACGGCTCACTCTTG+CGG	+	chr3_1:77786229-77786248	None:intergenic	55.0%
!	GCCGTAACCCTGACTTGATC+AGG	-	chr3_1:77786238-77786257	Msa0377370:three_prime_UTR	55.0%
	CCGATACCCCTGATCAAGTC+AGG	+	chr3_1:77786249-77786268	None:intergenic	55.0%
	ACGTGGTCTCTGGGCAATCA+AGG	-	chr3_1:77786299-77786318	Msa0377370:three_prime_UTR	55.0%
	GCAATCAAGGCTAAGCACGG+TGG	-	chr3_1:77786312-77786331	Msa0377370:three_prime_UTR	55.0%
	AACTTAGGTGGCTTCTCGGC+CGG	+	chr3_1:77786378-77786397	None:intergenic	55.0%
	TCGGCGGGGTAAAACTTAGG+TGG	+	chr3_1:77786390-77786409	None:intergenic	55.0%
	TCGTCGGCGGGGTAAAACTT+AGG	+	chr3_1:77786393-77786412	None:intergenic	55.0%
	GAGTGGCTTCTTCACGTCGT+CGG	+	chr3_1:77786409-77786428	None:intergenic	55.0%
	GGTGACGAACCTGAGCTTAG+TGG	+	chr3_1:77786454-77786473	None:intergenic	55.0%
	CATCAGCCCAGCACTAATGC+AGG	+	chr3_1:77786678-77786697	None:intergenic	55.0%
	CCCCTTGAGACGTGTGAATC+AGG	-	chr3_1:77788951-77788970	Msa0377370:intron	55.0%
	GGGAGAGAGCGAGTTCTTTG+AGG	-	chr3_1:77789077-77789096	Msa0377370:intron	55.0%
!!	GGACAAAAAGGTGCTCCCTC+AGG	-	chr3_1:77789186-77789205	Msa0377370:intron	55.0%
!	GCCAGGTTTTCCTTGAAGGC+AGG	-	chr3_1:77789292-77789311	Msa0377370:intron	55.0%
	TGGCTTCACACCTGCCTTCA+AGG	+	chr3_1:77789305-77789324	None:intergenic	55.0%
	TGGCTTCTTCACGTCGTCGG+CGG	+	chr3_1:77786406-77786425	None:intergenic	60.0%
!	GGCTTGTGCTTGTTGCGGAG+TGG	+	chr3_1:77786426-77786445	None:intergenic	60.0%
	TAGCGACGGGATCGTGGCGA+GGG	+	chr3_1:77786344-77786363	None:intergenic	65.0%
	TTAGCGACGGGATCGTGGCG+AGG	+	chr3_1:77786345-77786364	None:intergenic	65.0%
	CAGGCTTAGCGACGGGATCG+TGG	+	chr3_1:77786350-77786369	None:intergenic	65.0%
	GGAGCTGCAGGCTTAGCGAC+GGG	+	chr3_1:77786357-77786376	None:intergenic	65.0%
	CGGAGCTGCAGGCTTAGCGA+CGG	+	chr3_1:77786358-77786377	None:intergenic	65.0%
	CGTCGCTAAGCCTGCAGCTC+CGG	-	chr3_1:77786356-77786375	Msa0377370:three_prime_UTR	65.0%
	GCTTCTTCACGTCGTCGGCG+GGG	+	chr3_1:77786404-77786423	None:intergenic	65.0%
	GGCTTCTTCACGTCGTCGGC+GGG	+	chr3_1:77786405-77786424	None:intergenic	65.0%
	GGCTTCTCGGCCGGAGCTGC+AGG	+	chr3_1:77786369-77786388	None:intergenic	75.0%

Chromosome	Type	Strat	End	Strand	Name
chr3_1	gene	77786112	77789661	77786112	ID=Msa0377370;Name=Msa0377370
chr3_1	mRNA	77786112	77789661	77786112	ID=Msa0377370-mRNA-1;Parent=Msa0377370;Name=Msa0377370-mRNA-1;_AED=0.05;_eAED=0.05;_QI=95\|1\|1\|1\|0.75\|0.6\|5\|289\|233
chr3_1	exon	77786112	77786200	77786112	ID=Msa0377370-mRNA-1:exon:18610;Parent=Msa0377370-mRNA-1
chr3_1	exon	77786231	77786586	77786231	ID=Msa0377370-mRNA-1:exon:18609;Parent=Msa0377370-mRNA-1
chr3_1	exon	77786663	77786844	77786663	ID=Msa0377370-mRNA-1:exon:18608;Parent=Msa0377370-mRNA-1
chr3_1	exon	77788480	77788586	77788480	ID=Msa0377370-mRNA-1:exon:18607;Parent=Msa0377370-mRNA-1
chr3_1	exon	77789310	77789661	77789310	ID=Msa0377370-mRNA-1:exon:18606;Parent=Msa0377370-mRNA-1
chr3_1	five_prime_UTR	77789567	77789661	77789567	ID=Msa0377370-mRNA-1:five_prime_utr;Parent=Msa0377370-mRNA-1
chr3_1	CDS	77789310	77789566	77789310	ID=Msa0377370-mRNA-1:cds;Parent=Msa0377370-mRNA-1
chr3_1	CDS	77788480	77788586	77788480	ID=Msa0377370-mRNA-1:cds;Parent=Msa0377370-mRNA-1
chr3_1	CDS	77786663	77786844	77786663	ID=Msa0377370-mRNA-1:cds;Parent=Msa0377370-mRNA-1
chr3_1	CDS	77786431	77786586	77786431	ID=Msa0377370-mRNA-1:cds;Parent=Msa0377370-mRNA-1
chr3_1	three_prime_UTR	77786231	77786430	77786231	ID=Msa0377370-mRNA-1:three_prime_utr;Parent=Msa0377370-mRNA-1
chr3_1	three_prime_UTR	77786112	77786200	77786112	ID=Msa0377370-mRNA-1:three_prime_utr;Parent=Msa0377370-mRNA-1

Gene Sequence

>Msa0377370

ATGGCACCAAAAACAAGAACCGCAAGAGTGAGCCGTAACCCTGACTTGATCAGGGGTATCGGAAAATACTCGAGATCTGCTATGTATCACAAACGTGGTCTCTGGGCAATCAAGGCTAAGCACGGTGGAGCTTTCCCTCGCCACGATCCCGTCGCTAAGCCTGCAGCTCCGGCCGAGAAGCCACCTAAGTTTTACCCCGCCGACGACGTGAAGAAGCCACTCCGCAACAAGCACAAGCCAAAACCCACTAAGCTCAGGGCTTCTATTACTCCAGGGACAGTGTTGATTCTTCTTGCTGGAAGATTTAAGGGAAAGAGAGTTGTGTTTCTTAAACAGCTTCCTTCTGGACTTCTTCTCGTTACCGGTCCATTCAAGATTAATGGAGTCCCCTTGAGACGTGTGAATCAGGCTTATGTTATCGGTACATCTACCAAAGTAGATATTTCTTCGGTTAATGTTGACAAGTTTGATGACAAGTACTTCTCAAAGGAATCCCAGAAAAAGACGAAGAAGGGAGAGAGCGAGTTCTTTGAGGCAGATAAGGAGGACAAAAAGGTGCTCCCTCAGGAGAAGAAAGATGATCAAAAGACTGTCGATGCTGGTTTGTTAAAAGCCATTGACAGTGTTCCAGACTTGAAAACTTACCTAGGTGCCAGGTTTTCCTTGAAGGCAGGTGTGAAGCCACATGAGTTGGTCTTCTAA

Protein sequence

>Msa0377370

MAPKTRTARVSRNPDLIRGIGKYSRSAMYHKRGLWAIKAKHGGAFPRHDPVAKPAAPAEKPPKFYPADDVKKPLRNKHKPKPTKLRASITPGTVLILLAGRFKGKRVVFLKQLPSGLLLVTGPFKINGVPLRRVNQAYVIGTSTKVDISSVNVDKFDDKYFSKESQKKTKKGESEFFEADKEDKKVLPQEKKDDQKTVDAGLLKAIDSVPDLKTYLGARFSLKAGVKPHELVF*