AlfalfaGEDB | Msa1425070

M. sativa cultivar zhongmu-4 / Msa1425070

KEGG: K02942
GO: GO:0001932 GO:0001934 GO:0002181 GO:0003674 GO:0003735 GO:0005198 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005840 GO:0005844 GO:0005886 GO:0006412 GO:0006518 GO:0006807 GO:0008047 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009893 GO:0009987 GO:0010467 GO:0010562 GO:0010604 GO:0015934 GO:0016020 GO:0019207 GO:0019209 GO:0019220 GO:0019222 GO:0019538 GO:0019887 GO:0022625 GO:0022626 GO:0030234 GO:0030295 GO:0031323 GO:0031325 GO:0031399 GO:0031401 GO:0032147 GO:0032268 GO:0032270 GO:0032991 GO:0033674 GO:0034641 GO:0034645 GO:0042325 GO:0042327 GO:0042788 GO:0043043 GO:0043085 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043549 GO:0043603 GO:0043604 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044391 GO:0044422 GO:0044424 GO:0044444 GO:0044445 GO:0044446 GO:0044464 GO:0045859 GO:0045860 GO:0045937 GO:0048518 GO:0048522 GO:0050789 GO:0050790 GO:0050794 GO:0051171 GO:0051173 GO:0051174 GO:0051246 GO:0051247 GO:0051338 GO:0051347 GO:0060255 GO:0065007 GO:0065009 GO:0071704 GO:0071944 GO:0080090 GO:0098772 GO:1901564 GO:1901566 GO:1901576 GO:1990904
PFAM: PF00428.22

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1425070	XP_024625385.1	94.737	114	2	2	6	116	1	113	9.97e-64	199

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1425070	sp\|Q8LCW9\|RLA11_ARATH	54.545	110	49	1	7	115	3	112	2.56e-25	94.7

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1425070	G7L532	94.737	114	2	2	6	116	1	113	4.76e-64	199

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0001760	Msa1425070	0.811041	8.535782e-51	-8.615850e-47
Msa0002430	Msa1425070	0.801977	6.980180e-49	-8.615850e-47
Msa0027590	Msa1425070	0.832157	1.109360e-55	-8.615850e-47
Msa0114600	Msa1425070	0.823579	1.283780e-53	-8.615850e-47
Msa1351020	Msa1425070	0.819223	1.300361e-52	-8.615850e-47
Msa1425070	Msa1446410	0.806063	9.868979e-50	-8.615850e-47
Msa1425070	Msa1450560	0.811458	6.931116e-51	-8.615850e-47
Msa1425070	Msa1465700	0.844320	8.133882e-59	-8.615850e-47
Msa0602900	Msa1425070	0.833981	3.902246e-56	-8.615850e-47
Msa0605890	Msa1425070	0.824884	6.337449e-54	-8.615850e-47
Msa0622230	Msa1425070	0.848963	4.382654e-60	-8.615850e-47
Msa0643960	Msa1425070	0.835412	1.703930e-56	-8.615850e-47
Msa0748350	Msa1425070	0.850098	2.114656e-60	-8.615850e-47
Msa0788380	Msa1425070	0.808335	3.258440e-50	-8.615850e-47
Msa0790450	Msa1425070	0.811506	6.767152e-51	-8.615850e-47
Msa0834220	Msa1425070	0.801124	1.043921e-48	-8.615850e-47
Msa0167860	Msa1425070	0.848282	6.769070e-60	-8.615850e-47
Msa0191550	Msa1425070	0.802294	6.005960e-49	-8.615850e-47
Msa0192300	Msa1425070	0.820529	6.538232e-53	-8.615850e-47
Msa0194940	Msa1425070	0.804133	2.500330e-49	-8.615850e-47
Msa0195030	Msa1425070	0.823934	1.059964e-53	-8.615850e-47
Msa0237180	Msa1425070	0.818726	1.686103e-52	-8.615850e-47
Msa1235950	Msa1425070	0.842399	2.647952e-58	-8.615850e-47
Msa1235980	Msa1425070	0.840895	6.599200e-58	-8.615850e-47
Msa1237040	Msa1425070	0.818344	2.058919e-52	-8.615850e-47
Msa1316100	Msa1425070	0.812614	3.879659e-51	-8.615850e-47
Msa1317390	Msa1425070	0.807132	5.869179e-50	-8.615850e-47
Msa0371490	Msa1425070	0.814947	1.188562e-51	-8.615850e-47
Msa0377370	Msa1425070	0.848805	4.850543e-60	-8.615850e-47
Msa0416470	Msa1425070	0.803060	4.174277e-49	-8.615850e-47
Msa0426090	Msa1425070	0.823579	1.283780e-53	-8.615850e-47
Msa0426250	Msa1425070	0.806105	9.666313e-50	-8.615850e-47
Msa0472480	Msa1425070	0.826486	2.642430e-54	-8.615850e-47
Msa0481520	Msa1425070	0.801892	7.264471e-49	-8.615850e-47
Msa1040160	Msa1425070	0.804751	1.858217e-49	-8.615850e-47
Msa1085850	Msa1425070	0.808055	3.737492e-50	-8.615850e-47
Msa0239420	Msa1425070	0.820461	6.777499e-53	-8.615850e-47
Msa0277600	Msa1425070	0.808385	3.178820e-50	-8.615850e-47
Msa0281330	Msa1425070	0.863205	2.938571e-64	-8.615850e-47
Msa0281370	Msa1425070	0.874386	7.036066e-68	-8.615850e-47
Msa0301250	Msa1425070	0.822157	2.752475e-53	-8.615850e-47
Msa0313060	Msa1425070	0.839570	1.463880e-57	-8.615850e-47
Msa0315660	Msa1425070	0.807753	4.333820e-50	-8.615850e-47
Msa0340560	Msa1425070	0.807601	4.667164e-50	-8.615850e-47
Msa1116940	Msa1425070	0.806919	6.511717e-50	-8.615850e-47
Msa1130680	Msa1425070	0.902347	1.064132e-78	-8.615850e-47
Msa1131030	Msa1425070	0.989636	5.581041e-179	-8.615850e-47
Msa1165640	Msa1425070	0.847895	8.654661e-60	-8.615850e-47
Msa1186030	Msa1425070	0.818307	2.098787e-52	-8.615850e-47
Msa0547920	Msa1425070	0.835490	1.628216e-56	-8.615850e-47
Msa0550420	Msa1425070	0.801275	9.721776e-49	-8.615850e-47
Msa0573550	Msa1425070	0.860097	2.618920e-63	-8.615850e-47
Msa0597240	Msa1425070	0.810779	9.726599e-51	-8.615850e-47
Msa0929700	Msa1425070	0.882005	1.496325e-70	-8.615850e-47
Msa0930890	Msa1425070	0.803622	3.193273e-49	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1425070	MtrunA17_Chr7g0276131	94.737	114	2	2	6	116	1	113	9.17e-68	199
Msa1425070	MtrunA17_Chr8g0345951	57.273	110	45	1	6	115	1	108	2.32e-32	109
Msa1425070	MtrunA17_Chr4g0013621	56.364	110	48	0	6	115	1	110	4.80e-26	93.6
Msa1425070	MtrunA17_Chr3g0127831	56.364	110	48	0	6	115	1	110	6.07e-24	88.6
Msa1425070	MtrunA17_Chr2g0311301	55.455	110	49	0	6	115	1	110	6.07e-24	88.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa1425070	AT5G24510.1	52.679	112	50	2	6	115	1	111	3.68e-32	109
Msa1425070	AT1G01100.4	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1425070	AT1G01100.1	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1425070	AT1G01100.2	54.545	110	49	1	7	115	3	112	2.60e-26	94.7
Msa1425070	AT4G00810.1	53.571	112	48	2	7	115	3	113	3.96e-26	94.4
Msa1425070	AT4G00810.2	53.571	112	48	2	7	115	3	113	3.96e-26	94.4
Msa1425070	AT1G01100.3	48.624	109	41	1	7	115	3	96	5.77e-26	93.6
Msa1425070	AT5G47700.1	54.054	111	49	1	7	115	3	113	9.06e-26	93.6
Msa1425070	AT5G47700.2	54.054	111	49	1	7	115	3	113	9.06e-26	93.6

Find 40 sgRNAs with CRISPR-Local

Find 228 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTATTAGCTCTTTGAATAC+TGG	0.295098	tig0025818:+36664	Msa1425070:three_prime_UTR
AGCAGCAGCTGGAGCAGCAG+CGG	0.297502	tig0025818:-36540	None:intergenic
CTCTCTTCTTCCTCTGGCTC+TGG	0.324115	tig0025818:-36575	None:intergenic
AAATGATATGATTGCTTGCT+TGG	0.329661	tig0025818:+36868	Msa1425070:three_prime_UTR
TTCTTCTCAGCAGCAGCAGC+TGG	0.337075	tig0025818:-36551	None:intergenic
ATTCGGCTTGTTCGATGAAT+AGG	0.347729	tig0025818:+36613	Msa1425070:CDS
AGAAGAGAGCGACGAGGAAA+TGG	0.349286	tig0025818:+36589	Msa1425070:CDS
AGGTTGATGTTGAATCCTTC+TGG	0.358591	tig0025818:+36402	Msa1425070:CDS
TTTGCTATCACTTGAGGATT+CGG	0.364443	tig0025818:+36708	Msa1425070:three_prime_UTR
CCACCACCTGATGCTGCAAC+TGG	0.368389	tig0025818:-36515	None:intergenic
GCTGCTCCAGTTGCAGCATC+AGG	0.384530	tig0025818:+36509	Msa1425070:CDS
TGCTCCACCTCCAGCAGCAC+TGG	0.392502	tig0025818:-36477	None:intergenic
TCGTCGCTCTCTTCTTCCTC+TGG	0.421710	tig0025818:-36581	None:intergenic
GATTTGATTGCCAGTGCTGC+TGG	0.422177	tig0025818:+36467	Msa1425070:CDS
TTCTTATGATCCTAATGGAT+TGG	0.442659	tig0025818:+37008	Msa1425070:three_prime_UTR
CAACAAAGTTGTGATGTTGT+CGG	0.447259	tig0025818:-36369	None:intergenic
ATGAACCGAACCAATCCATT+AGG	0.451768	tig0025818:-37018	None:intergenic
ATTGCCAGTGCTGCTGGAGG+TGG	0.452006	tig0025818:+36473	Msa1425070:CDS
ATGATCCTAATGGATTGGTT+CGG	0.464603	tig0025818:+37013	Msa1425070:three_prime_UTR
AAAATAACAAAACATTTACT+TGG	0.464648	tig0025818:-36731	None:intergenic
GTGATGTTGTCGGCAGTTGC+TGG	0.481555	tig0025818:-36359	None:intergenic
AATGATATGATTGCTTGCTT+GGG	0.483094	tig0025818:+36869	Msa1425070:three_prime_UTR
GAAGAGAGCGACGAGGAAAT+GGG	0.488268	tig0025818:+36590	Msa1425070:CDS
CCAGTTGCAGCATCAGGTGG+TGG	0.493184	tig0025818:+36515	Msa1425070:CDS
TTAGCTCTTTGAATACTGGT+TGG	0.495732	tig0025818:+36668	Msa1425070:three_prime_UTR
GGATTCAACATCAACCTTTG+CGG	0.496398	tig0025818:-36396	None:intergenic
AGCGACGAGGAAATGGGATT+CGG	0.497435	tig0025818:+36596	Msa1425070:CDS
CTGGAATGTTGTCATCTTCG+AGG	0.500813	tig0025818:-36340	None:intergenic
GCAAGTTTAGCGAATAAAGC+GGG	0.558481	tig0025818:-36425	None:intergenic
TGTCATCTTCGAGGATGAGA+AGG	0.559827	tig0025818:-36331	None:intergenic
GCTCCAGTTGCAGCATCAGG+TGG	0.561855	tig0025818:+36512	Msa1425070:CDS
AACTTTGTTGAAATCCGCAA+AGG	0.566474	tig0025818:+36382	Msa1425070:CDS
AGCGAATAAAGCGGGCCAGA+AGG	0.567952	tig0025818:-36417	None:intergenic
AGCAAGTTTAGCGAATAAAG+CGG	0.583424	tig0025818:-36426	None:intergenic
TGGAGGTGGAGCAGCTGTTG+CGG	0.612651	tig0025818:+36487	Msa1425070:CDS
GTCATCTTCGAGGATGAGAA+GGG	0.616441	tig0025818:-36330	None:intergenic
TGAGAAGAAACCAGAGCCAG+AGG	0.638704	tig0025818:+36565	Msa1425070:CDS
TTGATTGCCAGTGCTGCTGG+AGG	0.642263	tig0025818:+36470	Msa1425070:CDS
AGAGGAAGAAGAGAGCGACG+AGG	0.663703	tig0025818:+36583	Msa1425070:CDS
TGTAGTGTGAAAATGTCGCT+CGG	0.684963	tig0025818:+36287	Msa1425070:intron

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	AATAAATATGCAAATAAATA+TGG	+	tig0025818:35672-35691	Msa1425070:intron	10.0%
!!!	CTTTTTGAAAAAAAAAAAAA+TGG	-	tig0025818:35812-35831	None:intergenic	10.0%
!!!	CATTTTTTTTTTTTTCAAAA+AGG	+	tig0025818:35810-35829	Msa1425070:intron	10.0%
!!	AATAAATATGCAAATAAATA+TGG	+	tig0025818:35672-35691	Msa1425070:intron	10.0%
!!!	CTTTTTGAAAAAAAAAAAAA+TGG	-	tig0025818:35812-35831	None:intergenic	10.0%
!!!	CATTTTTTTTTTTTTCAAAA+AGG	+	tig0025818:35810-35829	Msa1425070:intron	10.0%
!!	AAATATAATAATTGTAGAAG+AGG	+	tig0025818:35249-35268	Msa1425070:intron	15.0%
!!!	GATTTTTTTTTTTCAGAATA+AGG	+	tig0025818:35344-35363	Msa1425070:intron	15.0%
!!	TTTCTAAATGAAAAATCAAA+AGG	-	tig0025818:35569-35588	None:intergenic	15.0%
!!!	ATTTTTCATTTAGAAAGAAA+AGG	+	tig0025818:35573-35592	Msa1425070:intron	15.0%
!!!	TTTTTTTTTTTTCAAAAAGG+AGG	+	tig0025818:35813-35832	Msa1425070:intron	15.0%
!!	AAAATAACAAAACATTTACT+TGG	-	tig0025818:36734-36753	None:intergenic	15.0%
!!!	TCATTATCTTTTATCTTTTT+AGG	+	tig0025818:36929-36948	Msa1425070:three_prime_UTR	15.0%
!!	AAATATAATAATTGTAGAAG+AGG	+	tig0025818:35249-35268	Msa1425070:intron	15.0%
!!!	GATTTTTTTTTTTCAGAATA+AGG	+	tig0025818:35344-35363	Msa1425070:intron	15.0%
!!	TTTCTAAATGAAAAATCAAA+AGG	-	tig0025818:35569-35588	None:intergenic	15.0%
!!!	ATTTTTCATTTAGAAAGAAA+AGG	+	tig0025818:35573-35592	Msa1425070:intron	15.0%
!!!	TTTTTTTTTTTTCAAAAAGG+AGG	+	tig0025818:35813-35832	Msa1425070:intron	15.0%
!!	AAAATAACAAAACATTTACT+TGG	-	tig0025818:36734-36753	None:intergenic	15.0%
!!!	TCATTATCTTTTATCTTTTT+AGG	+	tig0025818:36929-36948	Msa1425070:three_prime_UTR	15.0%
!!	TTAGAATTTAAATATCGAGA+GGG	-	tig0025818:34850-34869	None:intergenic	20.0%
!!!	TTTAGAATTTAAATATCGAG+AGG	-	tig0025818:34851-34870	None:intergenic	20.0%
!!!	GCAAAAAAACTAAATTGTTT+TGG	-	tig0025818:34882-34901	None:intergenic	20.0%
!!	AAAAAAAATATTTCATCCCT+TGG	+	tig0025818:35136-35155	Msa1425070:intron	20.0%
!!	AAAAATTTAAACACTTCAGT+TGG	-	tig0025818:35169-35188	None:intergenic	20.0%
!!!	TTTTTAATTATGTGATTCTG+AGG	-	tig0025818:35509-35528	None:intergenic	20.0%
!!	AAAGGAACAAAAAAGAAAAA+AGG	+	tig0025818:35990-36009	Msa1425070:intron	20.0%
!!!	TTTGTTTTTGTTATTCGAAT+TGG	+	tig0025818:36213-36232	Msa1425070:intron	20.0%
!!	TTAGAATTTAAATATCGAGA+GGG	-	tig0025818:34850-34869	None:intergenic	20.0%
!!!	TTTAGAATTTAAATATCGAG+AGG	-	tig0025818:34851-34870	None:intergenic	20.0%
!!!	GCAAAAAAACTAAATTGTTT+TGG	-	tig0025818:34882-34901	None:intergenic	20.0%
!!	AAAAAAAATATTTCATCCCT+TGG	+	tig0025818:35136-35155	Msa1425070:intron	20.0%
!!	AAAAATTTAAACACTTCAGT+TGG	-	tig0025818:35169-35188	None:intergenic	20.0%
!!!	TTTTTAATTATGTGATTCTG+AGG	-	tig0025818:35509-35528	None:intergenic	20.0%
!!	AAAGGAACAAAAAAGAAAAA+AGG	+	tig0025818:35990-36009	Msa1425070:intron	20.0%
!!!	TTTGTTTTTGTTATTCGAAT+TGG	+	tig0025818:36213-36232	Msa1425070:intron	20.0%
!!	TTTAGTCTTTAACAACGAAA+GGG	-	tig0025818:34917-34936	None:intergenic	25.0%
!!	ATTTAGTCTTTAACAACGAA+AGG	-	tig0025818:34918-34937	None:intergenic	25.0%
!	CCACGTAAAAAAAAACAATT+AGG	-	tig0025818:34967-34986	None:intergenic	25.0%
!!!	CCTAATTGTTTTTTTTTACG+TGG	+	tig0025818:34964-34983	Msa1425070:intron	25.0%
!!!	ACAAAAATTGCAACTTGTTT+TGG	-	tig0025818:35058-35077	None:intergenic	25.0%
!	TCAGAATAAGGATGAAAATA+TGG	+	tig0025818:35356-35375	Msa1425070:intron	25.0%
!	TTTAGTGTTTACGAAAAACT+CGG	+	tig0025818:35479-35498	Msa1425070:intron	25.0%
!	CATAAGCATGCATTATTTAA+AGG	+	tig0025818:35617-35636	Msa1425070:intron	25.0%
!!	CTGTTTTGTATTATTGCTTT+TGG	-	tig0025818:35730-35749	None:intergenic	25.0%
!	GAACAAAAAAGAAAAAAGGA+GGG	+	tig0025818:35994-36013	Msa1425070:intron	25.0%
!!!	ATAGAAGTATGGTTCTAAAA+TGG	+	tig0025818:36044-36063	Msa1425070:intron	25.0%
!!!	TAGAAGTATGGTTCTAAAAT+GGG	+	tig0025818:36045-36064	Msa1425070:intron	25.0%
!!	GCAAATGTTTTGTGAAATTA+GGG	-	tig0025818:36126-36145	None:intergenic	25.0%
!	CTAATTTCACAAAACATTTG+CGG	+	tig0025818:36125-36144	Msa1425070:intron	25.0%
!	TTGCTGAGAAGAAAAATATT+AGG	+	tig0025818:36444-36463	Msa1425070:CDS	25.0%
!	TGCTGAGAAGAAAAATATTA+GGG	+	tig0025818:36445-36464	Msa1425070:CDS	25.0%
!!!	TTTTATTTTGCTATCACTTG+AGG	+	tig0025818:36702-36721	Msa1425070:three_prime_UTR	25.0%
!!	AGATTTTCTTATGATCCTAA+TGG	+	tig0025818:37003-37022	Msa1425070:three_prime_UTR	25.0%
!!	TTTAGTCTTTAACAACGAAA+GGG	-	tig0025818:34917-34936	None:intergenic	25.0%
!!	ATTTAGTCTTTAACAACGAA+AGG	-	tig0025818:34918-34937	None:intergenic	25.0%
!	CCACGTAAAAAAAAACAATT+AGG	-	tig0025818:34967-34986	None:intergenic	25.0%
!!!	CCTAATTGTTTTTTTTTACG+TGG	+	tig0025818:34964-34983	Msa1425070:intron	25.0%
!!!	ACAAAAATTGCAACTTGTTT+TGG	-	tig0025818:35058-35077	None:intergenic	25.0%
!	TCAGAATAAGGATGAAAATA+TGG	+	tig0025818:35356-35375	Msa1425070:intron	25.0%
!	TTTAGTGTTTACGAAAAACT+CGG	+	tig0025818:35479-35498	Msa1425070:intron	25.0%
!	CATAAGCATGCATTATTTAA+AGG	+	tig0025818:35617-35636	Msa1425070:intron	25.0%
!!	CTGTTTTGTATTATTGCTTT+TGG	-	tig0025818:35730-35749	None:intergenic	25.0%
!	GAACAAAAAAGAAAAAAGGA+GGG	+	tig0025818:35994-36013	Msa1425070:intron	25.0%
!!!	ATAGAAGTATGGTTCTAAAA+TGG	+	tig0025818:36044-36063	Msa1425070:intron	25.0%
!!!	TAGAAGTATGGTTCTAAAAT+GGG	+	tig0025818:36045-36064	Msa1425070:intron	25.0%
!!	GCAAATGTTTTGTGAAATTA+GGG	-	tig0025818:36126-36145	None:intergenic	25.0%
!	CTAATTTCACAAAACATTTG+CGG	+	tig0025818:36125-36144	Msa1425070:intron	25.0%
!	TTGCTGAGAAGAAAAATATT+AGG	+	tig0025818:36444-36463	Msa1425070:CDS	25.0%
!	TGCTGAGAAGAAAAATATTA+GGG	+	tig0025818:36445-36464	Msa1425070:CDS	25.0%
!!!	TTTTATTTTGCTATCACTTG+AGG	+	tig0025818:36702-36721	Msa1425070:three_prime_UTR	25.0%
!!	AGATTTTCTTATGATCCTAA+TGG	+	tig0025818:37003-37022	Msa1425070:three_prime_UTR	25.0%
	ATAACACTAGTACAACACAA+AGG	-	tig0025818:35316-35335	None:intergenic	30.0%
	ATTAAAATCAGCGAACAACT+CGG	+	tig0025818:35934-35953	Msa1425070:intron	30.0%
	TTTACTCAAATCACTGCAAA+AGG	+	tig0025818:35966-35985	Msa1425070:intron	30.0%
	GGAACAAAAAAGAAAAAAGG+AGG	+	tig0025818:35993-36012	Msa1425070:intron	30.0%
	ACCATACTTCTATTCTATAC+CGG	-	tig0025818:36037-36056	None:intergenic	30.0%
!	TTTTGTGAAATTAGGGTTTC+GGG	-	tig0025818:36119-36138	None:intergenic	30.0%
!	GTTTTGTGAAATTAGGGTTT+CGG	-	tig0025818:36120-36139	None:intergenic	30.0%
!	CGCAAATGTTTTGTGAAATT+AGG	-	tig0025818:36127-36146	None:intergenic	30.0%
	AAATCAAGATCTGATCTGTT+AGG	-	tig0025818:36264-36283	None:intergenic	30.0%
!	TCTATTAGCTCTTTGAATAC+TGG	+	tig0025818:36664-36683	Msa1425070:three_prime_UTR	30.0%
	AAATGATATGATTGCTTGCT+TGG	+	tig0025818:36868-36887	Msa1425070:three_prime_UTR	30.0%
	AATGATATGATTGCTTGCTT+GGG	+	tig0025818:36869-36888	Msa1425070:three_prime_UTR	30.0%
!	TTCTTATGATCCTAATGGAT+TGG	+	tig0025818:37008-37027	Msa1425070:three_prime_UTR	30.0%
	ATAACACTAGTACAACACAA+AGG	-	tig0025818:35316-35335	None:intergenic	30.0%
	ATTAAAATCAGCGAACAACT+CGG	+	tig0025818:35934-35953	Msa1425070:intron	30.0%
	TTTACTCAAATCACTGCAAA+AGG	+	tig0025818:35966-35985	Msa1425070:intron	30.0%
	GGAACAAAAAAGAAAAAAGG+AGG	+	tig0025818:35993-36012	Msa1425070:intron	30.0%
	ACCATACTTCTATTCTATAC+CGG	-	tig0025818:36037-36056	None:intergenic	30.0%
!	TTTTGTGAAATTAGGGTTTC+GGG	-	tig0025818:36119-36138	None:intergenic	30.0%
!	GTTTTGTGAAATTAGGGTTT+CGG	-	tig0025818:36120-36139	None:intergenic	30.0%
!	CGCAAATGTTTTGTGAAATT+AGG	-	tig0025818:36127-36146	None:intergenic	30.0%
	AAATCAAGATCTGATCTGTT+AGG	-	tig0025818:36264-36283	None:intergenic	30.0%
!	TCTATTAGCTCTTTGAATAC+TGG	+	tig0025818:36664-36683	Msa1425070:three_prime_UTR	30.0%
	AAATGATATGATTGCTTGCT+TGG	+	tig0025818:36868-36887	Msa1425070:three_prime_UTR	30.0%
	AATGATATGATTGCTTGCTT+GGG	+	tig0025818:36869-36888	Msa1425070:three_prime_UTR	30.0%
!	TTCTTATGATCCTAATGGAT+TGG	+	tig0025818:37008-37027	Msa1425070:three_prime_UTR	30.0%
	TTTAAATATCGAGAGGGAGA+GGG	-	tig0025818:34844-34863	None:intergenic	35.0%
	ATTTAAATATCGAGAGGGAG+AGG	-	tig0025818:34845-34864	None:intergenic	35.0%
	AACGAAAGGGATTAAGTTAC+AGG	-	tig0025818:34904-34923	None:intergenic	35.0%
	AAAGGATAAGTGACGGTTTA+GGG	-	tig0025818:35298-35317	None:intergenic	35.0%
	ACAACACAAAGGATAAGTGA+CGG	-	tig0025818:35305-35324	None:intergenic	35.0%
	CAAATCACTGCAAAAGGAAA+AGG	+	tig0025818:35972-35991	Msa1425070:intron	35.0%
	TCCGGTATAGAATAGAAGTA+TGG	+	tig0025818:36033-36052	Msa1425070:intron	35.0%
!!	TTCTAATGCTGATTCTCCTT+GGG	-	tig0025818:36084-36103	None:intergenic	35.0%
!!	ATTCTAATGCTGATTCTCCT+TGG	-	tig0025818:36085-36104	None:intergenic	35.0%
	TTTGTGAAATTAGGGTTTCG+GGG	-	tig0025818:36118-36137	None:intergenic	35.0%
	GTGTTACCTGAAATTGAGAT+CGG	-	tig0025818:36189-36208	None:intergenic	35.0%
	CAACAAAGTTGTGATGTTGT+CGG	-	tig0025818:36372-36391	None:intergenic	35.0%
	AACTTTGTTGAAATCCGCAA+AGG	+	tig0025818:36382-36401	Msa1425070:CDS	35.0%
	AGCAAGTTTAGCGAATAAAG+CGG	-	tig0025818:36429-36448	None:intergenic	35.0%
!	TTAGCTCTTTGAATACTGGT+TGG	+	tig0025818:36668-36687	Msa1425070:three_prime_UTR	35.0%
!	TTTGCTATCACTTGAGGATT+CGG	+	tig0025818:36708-36727	Msa1425070:three_prime_UTR	35.0%
!!	ATGATCCTAATGGATTGGTT+CGG	+	tig0025818:37013-37032	Msa1425070:three_prime_UTR	35.0%
	TTTAAATATCGAGAGGGAGA+GGG	-	tig0025818:34844-34863	None:intergenic	35.0%
	ATTTAAATATCGAGAGGGAG+AGG	-	tig0025818:34845-34864	None:intergenic	35.0%
	AACGAAAGGGATTAAGTTAC+AGG	-	tig0025818:34904-34923	None:intergenic	35.0%
	AAAGGATAAGTGACGGTTTA+GGG	-	tig0025818:35298-35317	None:intergenic	35.0%
	ACAACACAAAGGATAAGTGA+CGG	-	tig0025818:35305-35324	None:intergenic	35.0%
	CAAATCACTGCAAAAGGAAA+AGG	+	tig0025818:35972-35991	Msa1425070:intron	35.0%
	TCCGGTATAGAATAGAAGTA+TGG	+	tig0025818:36033-36052	Msa1425070:intron	35.0%
!!	TTCTAATGCTGATTCTCCTT+GGG	-	tig0025818:36084-36103	None:intergenic	35.0%
!!	ATTCTAATGCTGATTCTCCT+TGG	-	tig0025818:36085-36104	None:intergenic	35.0%
	TTTGTGAAATTAGGGTTTCG+GGG	-	tig0025818:36118-36137	None:intergenic	35.0%
	GTGTTACCTGAAATTGAGAT+CGG	-	tig0025818:36189-36208	None:intergenic	35.0%
	CAACAAAGTTGTGATGTTGT+CGG	-	tig0025818:36372-36391	None:intergenic	35.0%
	AACTTTGTTGAAATCCGCAA+AGG	+	tig0025818:36382-36401	Msa1425070:CDS	35.0%
	AGCAAGTTTAGCGAATAAAG+CGG	-	tig0025818:36429-36448	None:intergenic	35.0%
!	TTAGCTCTTTGAATACTGGT+TGG	+	tig0025818:36668-36687	Msa1425070:three_prime_UTR	35.0%
!	TTTGCTATCACTTGAGGATT+CGG	+	tig0025818:36708-36727	Msa1425070:three_prime_UTR	35.0%
!!	ATGATCCTAATGGATTGGTT+CGG	+	tig0025818:37013-37032	Msa1425070:three_prime_UTR	35.0%
	TTAAATATCGAGAGGGAGAG+GGG	-	tig0025818:34843-34862	None:intergenic	40.0%
!!	TTCAGTTGGTAAGCTTCCAA+GGG	-	tig0025818:35155-35174	None:intergenic	40.0%
	AAGGATAAGTGACGGTTTAG+GGG	-	tig0025818:35297-35316	None:intergenic	40.0%
	CAAAGGATAAGTGACGGTTT+AGG	-	tig0025818:35299-35318	None:intergenic	40.0%
!	CGAACTCATCTAGAATTGAC+TGG	+	tig0025818:35396-35415	Msa1425070:intron	40.0%
!!	TCTCCTTGGGCTTTATGTTT+TGG	-	tig0025818:36071-36090	None:intergenic	40.0%
	TCAAGATCTGATCTGTTAGG+AGG	-	tig0025818:36261-36280	None:intergenic	40.0%
	TGTAGTGTGAAAATGTCGCT+CGG	+	tig0025818:36287-36306	Msa1425070:intron	40.0%
	GGATTCAACATCAACCTTTG+CGG	-	tig0025818:36399-36418	None:intergenic	40.0%
!!	AGGTTGATGTTGAATCCTTC+TGG	+	tig0025818:36402-36421	Msa1425070:CDS	40.0%
	GCAAGTTTAGCGAATAAAGC+GGG	-	tig0025818:36428-36447	None:intergenic	40.0%
!	ATTCGGCTTGTTCGATGAAT+AGG	+	tig0025818:36613-36632	Msa1425070:CDS	40.0%
	ATGAACCGAACCAATCCATT+AGG	-	tig0025818:37021-37040	None:intergenic	40.0%
	TTAAATATCGAGAGGGAGAG+GGG	-	tig0025818:34843-34862	None:intergenic	40.0%
!!	TTCAGTTGGTAAGCTTCCAA+GGG	-	tig0025818:35155-35174	None:intergenic	40.0%
	AAGGATAAGTGACGGTTTAG+GGG	-	tig0025818:35297-35316	None:intergenic	40.0%
	CAAAGGATAAGTGACGGTTT+AGG	-	tig0025818:35299-35318	None:intergenic	40.0%
!	CGAACTCATCTAGAATTGAC+TGG	+	tig0025818:35396-35415	Msa1425070:intron	40.0%
!!	TCTCCTTGGGCTTTATGTTT+TGG	-	tig0025818:36071-36090	None:intergenic	40.0%
	TCAAGATCTGATCTGTTAGG+AGG	-	tig0025818:36261-36280	None:intergenic	40.0%
	TGTAGTGTGAAAATGTCGCT+CGG	+	tig0025818:36287-36306	Msa1425070:intron	40.0%
	GGATTCAACATCAACCTTTG+CGG	-	tig0025818:36399-36418	None:intergenic	40.0%
!!	AGGTTGATGTTGAATCCTTC+TGG	+	tig0025818:36402-36421	Msa1425070:CDS	40.0%
	GCAAGTTTAGCGAATAAAGC+GGG	-	tig0025818:36428-36447	None:intergenic	40.0%
!	ATTCGGCTTGTTCGATGAAT+AGG	+	tig0025818:36613-36632	Msa1425070:CDS	40.0%
	ATGAACCGAACCAATCCATT+AGG	-	tig0025818:37021-37040	None:intergenic	40.0%
!!	CTTCAGTTGGTAAGCTTCCA+AGG	-	tig0025818:35156-35175	None:intergenic	45.0%
	ATAAGTGACGGTTTAGGGGA+GGG	-	tig0025818:35293-35312	None:intergenic	45.0%
	TCGTCTCCGATCTCAATTTC+AGG	+	tig0025818:36180-36199	Msa1425070:intron	45.0%
	GTCATCTTCGAGGATGAGAA+GGG	-	tig0025818:36333-36352	None:intergenic	45.0%
	TGTCATCTTCGAGGATGAGA+AGG	-	tig0025818:36334-36353	None:intergenic	45.0%
	CTGGAATGTTGTCATCTTCG+AGG	-	tig0025818:36343-36362	None:intergenic	45.0%
!!	CTTCAGTTGGTAAGCTTCCA+AGG	-	tig0025818:35156-35175	None:intergenic	45.0%
	ATAAGTGACGGTTTAGGGGA+GGG	-	tig0025818:35293-35312	None:intergenic	45.0%
	TCGTCTCCGATCTCAATTTC+AGG	+	tig0025818:36180-36199	Msa1425070:intron	45.0%
	GTCATCTTCGAGGATGAGAA+GGG	-	tig0025818:36333-36352	None:intergenic	45.0%
	TGTCATCTTCGAGGATGAGA+AGG	-	tig0025818:36334-36353	None:intergenic	45.0%
	CTGGAATGTTGTCATCTTCG+AGG	-	tig0025818:36343-36362	None:intergenic	45.0%
!!	AATTAAAAAAATTATCAAAA+AGG	+	tig0025818:35520-35539	Msa1425070:intron	5.0%
!!	AATTAAAAAAATTATCAAAA+AGG	+	tig0025818:35520-35539	Msa1425070:intron	5.0%
	GATAAGTGACGGTTTAGGGG+AGG	-	tig0025818:35294-35313	None:intergenic	50.0%
	CACGTACACATGTGTGTGTG+TGG	-	tig0025818:35773-35792	None:intergenic	50.0%
!	GCTCAAGTCGAGTTTCGAGT+TGG	-	tig0025818:35879-35898	None:intergenic	50.0%
	GGTTACGAAGAGTAGCAGTC+CGG	+	tig0025818:36015-36034	Msa1425070:intron	50.0%
	GGGCCAAAACATAAAGCCCA+AGG	+	tig0025818:36065-36084	Msa1425070:intron	50.0%
	AGACGACGAGAAGAGTAAGG+AGG	-	tig0025818:36166-36185	None:intergenic	50.0%
	GATTTGATTGCCAGTGCTGC+TGG	+	tig0025818:36467-36486	Msa1425070:CDS	50.0%
	TGAGAAGAAACCAGAGCCAG+AGG	+	tig0025818:36565-36584	Msa1425070:CDS	50.0%
	AGAAGAGAGCGACGAGGAAA+TGG	+	tig0025818:36589-36608	Msa1425070:CDS	50.0%
	GAAGAGAGCGACGAGGAAAT+GGG	+	tig0025818:36590-36609	Msa1425070:CDS	50.0%
	AGCGACGAGGAAATGGGATT+CGG	+	tig0025818:36596-36615	Msa1425070:CDS	50.0%
	GATAAGTGACGGTTTAGGGG+AGG	-	tig0025818:35294-35313	None:intergenic	50.0%
	CACGTACACATGTGTGTGTG+TGG	-	tig0025818:35773-35792	None:intergenic	50.0%
!	GCTCAAGTCGAGTTTCGAGT+TGG	-	tig0025818:35879-35898	None:intergenic	50.0%
	GGTTACGAAGAGTAGCAGTC+CGG	+	tig0025818:36015-36034	Msa1425070:intron	50.0%
	GGGCCAAAACATAAAGCCCA+AGG	+	tig0025818:36065-36084	Msa1425070:intron	50.0%
	AGACGACGAGAAGAGTAAGG+AGG	-	tig0025818:36166-36185	None:intergenic	50.0%
	GATTTGATTGCCAGTGCTGC+TGG	+	tig0025818:36467-36486	Msa1425070:CDS	50.0%
	TGAGAAGAAACCAGAGCCAG+AGG	+	tig0025818:36565-36584	Msa1425070:CDS	50.0%
	AGAAGAGAGCGACGAGGAAA+TGG	+	tig0025818:36589-36608	Msa1425070:CDS	50.0%
	GAAGAGAGCGACGAGGAAAT+GGG	+	tig0025818:36590-36609	Msa1425070:CDS	50.0%
	AGCGACGAGGAAATGGGATT+CGG	+	tig0025818:36596-36615	Msa1425070:CDS	50.0%
!	GGTTTAGGGGAGGGAAGTGT+AGG	-	tig0025818:35284-35303	None:intergenic	55.0%
	CGGAGACGACGAGAAGAGTA+AGG	-	tig0025818:36169-36188	None:intergenic	55.0%
	GTGATGTTGTCGGCAGTTGC+TGG	-	tig0025818:36362-36381	None:intergenic	55.0%
	AGCGAATAAAGCGGGCCAGA+AGG	-	tig0025818:36420-36439	None:intergenic	55.0%
!	TTGATTGCCAGTGCTGCTGG+AGG	+	tig0025818:36470-36489	Msa1425070:CDS	55.0%
	TTCTTCTCAGCAGCAGCAGC+TGG	-	tig0025818:36554-36573	None:intergenic	55.0%
!	CTCTCTTCTTCCTCTGGCTC+TGG	-	tig0025818:36578-36597	None:intergenic	55.0%
	TCGTCGCTCTCTTCTTCCTC+TGG	-	tig0025818:36584-36603	None:intergenic	55.0%
	AGAGGAAGAAGAGAGCGACG+AGG	+	tig0025818:36583-36602	Msa1425070:CDS	55.0%
!	GGTTTAGGGGAGGGAAGTGT+AGG	-	tig0025818:35284-35303	None:intergenic	55.0%
	CGGAGACGACGAGAAGAGTA+AGG	-	tig0025818:36169-36188	None:intergenic	55.0%
	GTGATGTTGTCGGCAGTTGC+TGG	-	tig0025818:36362-36381	None:intergenic	55.0%
	AGCGAATAAAGCGGGCCAGA+AGG	-	tig0025818:36420-36439	None:intergenic	55.0%
!	TTGATTGCCAGTGCTGCTGG+AGG	+	tig0025818:36470-36489	Msa1425070:CDS	55.0%
	TTCTTCTCAGCAGCAGCAGC+TGG	-	tig0025818:36554-36573	None:intergenic	55.0%
!	CTCTCTTCTTCCTCTGGCTC+TGG	-	tig0025818:36578-36597	None:intergenic	55.0%
	TCGTCGCTCTCTTCTTCCTC+TGG	-	tig0025818:36584-36603	None:intergenic	55.0%
	AGAGGAAGAAGAGAGCGACG+AGG	+	tig0025818:36583-36602	Msa1425070:CDS	55.0%
!	ATTGCCAGTGCTGCTGGAGG+TGG	+	tig0025818:36473-36492	Msa1425070:CDS	60.0%
	TGGAGGTGGAGCAGCTGTTG+CGG	+	tig0025818:36487-36506	Msa1425070:CDS	60.0%
	GCTGCTCCAGTTGCAGCATC+AGG	+	tig0025818:36509-36528	Msa1425070:CDS	60.0%
	GCTCCAGTTGCAGCATCAGG+TGG	+	tig0025818:36512-36531	Msa1425070:CDS	60.0%
	CCACCACCTGATGCTGCAAC+TGG	-	tig0025818:36518-36537	None:intergenic	60.0%
	CCAGTTGCAGCATCAGGTGG+TGG	+	tig0025818:36515-36534	Msa1425070:CDS	60.0%
!	ATTGCCAGTGCTGCTGGAGG+TGG	+	tig0025818:36473-36492	Msa1425070:CDS	60.0%
	TGGAGGTGGAGCAGCTGTTG+CGG	+	tig0025818:36487-36506	Msa1425070:CDS	60.0%
	GCTGCTCCAGTTGCAGCATC+AGG	+	tig0025818:36509-36528	Msa1425070:CDS	60.0%
	GCTCCAGTTGCAGCATCAGG+TGG	+	tig0025818:36512-36531	Msa1425070:CDS	60.0%
	CCACCACCTGATGCTGCAAC+TGG	-	tig0025818:36518-36537	None:intergenic	60.0%
	CCAGTTGCAGCATCAGGTGG+TGG	+	tig0025818:36515-36534	Msa1425070:CDS	60.0%
	TGCTCCACCTCCAGCAGCAC+TGG	-	tig0025818:36480-36499	None:intergenic	65.0%
	AGCAGCAGCTGGAGCAGCAG+CGG	-	tig0025818:36543-36562	None:intergenic	65.0%
	TGCTCCACCTCCAGCAGCAC+TGG	-	tig0025818:36480-36499	None:intergenic	65.0%
	AGCAGCAGCTGGAGCAGCAG+CGG	-	tig0025818:36543-36562	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
tig0025818	gene	34810	37059	34810	ID=Msa1425070;Name=Msa1425070
tig0025818	mRNA	34810	37059	34810	ID=Msa1425070-mRNA-1;Parent=Msa1425070;Name=Msa1425070-mRNA-1;_AED=0.27;_eAED=0.27;_QI=0\|0\|0.5\|0.5\|0\|0\|2\|425\|116
tig0025818	exon	34810	34817	34810	ID=Msa1425070-mRNA-1:exon:4113;Parent=Msa1425070-mRNA-1
tig0025818	exon	36292	37059	36292	ID=Msa1425070-mRNA-1:exon:4114;Parent=Msa1425070-mRNA-1
tig0025818	CDS	34810	34817	34810	ID=Msa1425070-mRNA-1:cds;Parent=Msa1425070-mRNA-1
tig0025818	CDS	36292	36634	36292	ID=Msa1425070-mRNA-1:cds;Parent=Msa1425070-mRNA-1
tig0025818	three_prime_UTR	36635	37059	36635	ID=Msa1425070-mRNA-1:three_prime_utr;Parent=Msa1425070-mRNA-1

Gene Sequence	>Msa1425070 ATGGTGTTTGTGAAAATGTCGCTCGGAGAAACTGCTTGCTCATACGCCCTTCTCATCCTCGAAGATGACAACATTCCAGCAACTGCCGACAACATCACAACTTTGTTGAAATCCGCAAAGGTTGATGTTGAATCCTTCTGGCCCGCTTTATTCGCTAAACTTGCTGAGAAGAAAAATATTAGGGATTTGATTGCCAGTGCTGCTGGAGGTGGAGCAGCTGTTGCGGCTGCTCCAGTTGCAGCATCAGGTGGTGGTGCCGCTGCTGCTCCAGCTGCTGCTGCTGAGAAGAAACCAGAGCCAGAGGAAGAAGAGAGCGACGAGGAAATGGGATTCGGCTTGTTCGATGAATAG
Protein sequence	>Msa1425070 MVFVKMSLGETACSYALLILEDDNIPATADNITTLLKSAKVDVESFWPALFAKLAEKKNIRDLIASAAGGGAAVAAAPVAASGGGAAAAPAAAAEKKPEPEEEESDEEMGFGLFDE*