Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0371490 | XP_013461067.1 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 7.37e-146 | 414 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0371490 | sp|O82528|RL15_PETHY | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 7.90e-131 | 369 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0371490 | I3T9M3 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 3.52e-146 | 414 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0001760 | Msa0371490 | 0.897485 | 1.343063e-76 | -8.615850e-47 |
Msa0003330 | Msa0371490 | 0.851215 | 1.025868e-60 | -8.615850e-47 |
Msa0021290 | Msa0371490 | 0.810819 | 9.533249e-51 | -8.615850e-47 |
Msa0027590 | Msa0371490 | 0.854994 | 8.495367e-62 | -8.615850e-47 |
Msa0037230 | Msa0371490 | 0.809666 | 1.690553e-50 | -8.615850e-47 |
Msa0040220 | Msa0371490 | 0.809983 | 1.444623e-50 | -8.615850e-47 |
Msa0042510 | Msa0371490 | 0.811584 | 6.507821e-51 | -8.615850e-47 |
Msa0071640 | Msa0371490 | 0.824833 | 6.513262e-54 | -8.615850e-47 |
Msa0075350 | Msa0371490 | 0.807256 | 5.522905e-50 | -8.615850e-47 |
Msa0079560 | Msa0371490 | 0.810217 | 1.286114e-50 | -8.615850e-47 |
Msa0086160 | Msa0371490 | 0.816100 | 6.579864e-52 | -8.615850e-47 |
Msa0087910 | Msa0371490 | 0.811424 | 7.049997e-51 | -8.615850e-47 |
Msa0089540 | Msa0371490 | 0.835504 | 1.615134e-56 | -8.615850e-47 |
Msa0094210 | Msa0371490 | 0.841630 | 4.230270e-58 | -8.615850e-47 |
Msa0114600 | Msa0371490 | 0.826223 | 3.052764e-54 | -8.615850e-47 |
Msa0116600 | Msa0371490 | 0.815395 | 9.449948e-52 | -8.615850e-47 |
Msa0116690 | Msa0371490 | 0.817065 | 3.999604e-52 | -8.615850e-47 |
Msa0127230 | Msa0371490 | 0.801374 | 9.281797e-49 | -8.615850e-47 |
Msa0128330 | Msa0371490 | 0.847210 | 1.335460e-59 | -8.615850e-47 |
Msa0132460 | Msa0371490 | 0.914027 | 3.101288e-84 | -8.615850e-47 |
Msa0134580 | Msa0371490 | 0.868597 | 5.801002e-66 | -8.615850e-47 |
Msa0167860 | Msa0371490 | 0.866375 | 2.984692e-65 | -8.615850e-47 |
Msa0168320 | Msa0371490 | 0.864461 | 1.195961e-64 | -8.615850e-47 |
Msa0169710 | Msa0371490 | 0.809670 | 1.687395e-50 | -8.615850e-47 |
Msa0174580 | Msa0371490 | 0.831823 | 1.341295e-55 | -8.615850e-47 |
Msa0182050 | Msa0371490 | 0.914681 | 1.441366e-84 | -8.615850e-47 |
Msa0182100 | Msa0371490 | 0.919613 | 3.618081e-87 | -8.615850e-47 |
Msa0183840 | Msa0371490 | 0.831289 | 1.815812e-55 | -8.615850e-47 |
Msa0188740 | Msa0371490 | 0.893636 | 5.224818e-75 | -8.615850e-47 |
Msa0191450 | Msa0371490 | 0.841606 | 4.292176e-58 | -8.615850e-47 |
Msa0191550 | Msa0371490 | 0.860903 | 1.492750e-63 | -8.615850e-47 |
Msa0192050 | Msa0371490 | 0.810990 | 8.758510e-51 | -8.615850e-47 |
Msa0192300 | Msa0371490 | 0.882631 | 8.857958e-71 | -8.615850e-47 |
Msa0194940 | Msa0371490 | 0.830318 | 3.141207e-55 | -8.615850e-47 |
Msa0195030 | Msa0371490 | 0.845657 | 3.541607e-59 | -8.615850e-47 |
Msa0233550 | Msa0371490 | 0.842909 | 1.938410e-58 | -8.615850e-47 |
Msa0237180 | Msa0371490 | 0.841962 | 3.456145e-58 | -8.615850e-47 |
Msa0371490 | Msa0373350 | 0.817555 | 3.103282e-52 | -8.615850e-47 |
Msa0371490 | Msa0376850 | 0.836051 | 1.173295e-56 | -8.615850e-47 |
Msa0371490 | Msa0377370 | 0.823881 | 1.090673e-53 | -8.615850e-47 |
Msa0371490 | Msa0377520 | 0.897322 | 1.574027e-76 | -8.615850e-47 |
Msa0371490 | Msa0378620 | -0.833123 | 6.388549e-56 | -8.615850e-47 |
Msa0371490 | Msa0380590 | 0.831946 | 1.251310e-55 | -8.615850e-47 |
Msa0371490 | Msa0382670 | 0.887450 | 1.412086e-72 | -8.615850e-47 |
Msa0371490 | Msa0385030 | 0.814986 | 1.165252e-51 | -8.615850e-47 |
Msa0371490 | Msa0387290 | 0.834900 | 2.293297e-56 | -8.615850e-47 |
Msa0371490 | Msa0388520 | 0.871629 | 5.909819e-67 | -8.615850e-47 |
Msa0371490 | Msa0416470 | 0.849526 | 3.055232e-60 | -8.615850e-47 |
Msa0371490 | Msa0417850 | -0.806318 | 8.718375e-50 | -8.615850e-47 |
Msa0371490 | Msa0426090 | 0.867544 | 1.265483e-65 | -8.615850e-47 |
Msa0371490 | Msa0426250 | 0.847371 | 1.206117e-59 | -8.615850e-47 |
Msa0371490 | Msa0426940 | 0.825005 | 5.934404e-54 | -8.615850e-47 |
Msa0371490 | Msa0430130 | 0.841529 | 4.497042e-58 | -8.615850e-47 |
Msa0371490 | Msa0432260 | -0.813769 | 2.164251e-51 | -8.615850e-47 |
Msa0371490 | Msa0433060 | 0.818500 | 1.898067e-52 | -8.615850e-47 |
Msa0371490 | Msa0472480 | 0.871417 | 6.944210e-67 | -8.615850e-47 |
Msa0371490 | Msa0475810 | 0.802149 | 6.432645e-49 | -8.615850e-47 |
Msa0371490 | Msa0476730 | -0.800021 | 1.752235e-48 | -8.615850e-47 |
Msa0371490 | Msa0481520 | 0.826566 | 2.528048e-54 | -8.615850e-47 |
Msa0371490 | Msa0500420 | 0.833417 | 5.398719e-56 | -8.615850e-47 |
Msa0371490 | Msa0511760 | 0.913189 | 8.204762e-84 | -8.615850e-47 |
Msa0371490 | Msa0516830 | 0.836807 | 7.535532e-57 | -8.615850e-47 |
Msa0371490 | Msa0517480 | 0.868597 | 5.801002e-66 | -8.615850e-47 |
Msa0371490 | Msa0521730 | 0.825629 | 4.222637e-54 | -8.615850e-47 |
Msa0371490 | Msa0524680 | 0.818895 | 1.543663e-52 | -8.615850e-47 |
Msa0371490 | Msa0547920 | 0.872651 | 2.699254e-67 | -8.615850e-47 |
Msa0371490 | Msa0573550 | 0.904193 | 1.584558e-79 | -8.615850e-47 |
Msa0371490 | Msa0574780 | 0.854984 | 8.552793e-62 | -8.615850e-47 |
Msa0371490 | Msa0578010 | 0.852822 | 3.586115e-61 | -8.615850e-47 |
Msa0371490 | Msa0582070 | 0.841820 | 3.768666e-58 | -8.615850e-47 |
Msa0371490 | Msa0591050 | 0.813750 | 2.185085e-51 | -8.615850e-47 |
Msa0371490 | Msa0597240 | 0.828438 | 8.989890e-55 | -8.615850e-47 |
Msa0371490 | Msa0602900 | 0.862613 | 4.475498e-64 | -8.615850e-47 |
Msa0371490 | Msa0605140 | 0.802959 | 4.380145e-49 | -8.615850e-47 |
Msa0371490 | Msa0605610 | 0.817696 | 2.884137e-52 | -8.615850e-47 |
Msa0371490 | Msa0605890 | 0.845031 | 5.231354e-59 | -8.615850e-47 |
Msa0371490 | Msa0609120 | 0.859587 | 3.731013e-63 | -8.615850e-47 |
Msa0371490 | Msa0617310 | 0.807521 | 4.853814e-50 | -8.615850e-47 |
Msa0371490 | Msa0619230 | 0.893814 | 4.426533e-75 | -8.615850e-47 |
Msa0371490 | Msa0621190 | 0.884044 | 2.682250e-71 | -8.615850e-47 |
Msa0371490 | Msa0622230 | 0.837203 | 5.971569e-57 | -8.615850e-47 |
Msa0371490 | Msa0643960 | 0.870267 | 1.660144e-66 | -8.615850e-47 |
Msa0371490 | Msa0656450 | 0.861601 | 9.149873e-64 | -8.615850e-47 |
Msa0371490 | Msa0691760 | 0.896620 | 3.097265e-76 | -8.615850e-47 |
Msa0371490 | Msa0694400 | 0.843020 | 1.811121e-58 | -8.615850e-47 |
Msa0371490 | Msa0700370 | 0.822801 | 1.950610e-53 | -8.615850e-47 |
Msa0371490 | Msa0704860 | 0.846758 | 1.775997e-59 | -8.615850e-47 |
Msa0371490 | Msa0708630 | 0.914658 | 1.480335e-84 | -8.615850e-47 |
Msa0371490 | Msa0748350 | 0.855574 | 5.757155e-62 | -8.615850e-47 |
Msa0371490 | Msa0759660 | 0.806051 | 9.923325e-50 | -8.615850e-47 |
Msa0371490 | Msa0784830 | 0.801848 | 7.417499e-49 | -8.615850e-47 |
Msa0371490 | Msa0790450 | 0.897222 | 1.733146e-76 | -8.615850e-47 |
Msa0371490 | Msa0834220 | 0.862914 | 3.614437e-64 | -8.615850e-47 |
Msa0371490 | Msa0838070 | 0.800236 | 1.584151e-48 | -8.615850e-47 |
Msa0371490 | Msa0880050 | 0.822291 | 2.563010e-53 | -8.615850e-47 |
Msa0371490 | Msa0881240 | 0.838336 | 3.055049e-57 | -8.615850e-47 |
Msa0371490 | Msa0929680 | 0.872917 | 2.200115e-67 | -8.615850e-47 |
Msa0371490 | Msa0929700 | 0.902237 | 1.190034e-78 | -8.615850e-47 |
Msa0371490 | Msa0930100 | 0.844825 | 5.947749e-59 | -8.615850e-47 |
Msa0371490 | Msa0930360 | 0.886251 | 4.024242e-72 | -8.615850e-47 |
Msa0371490 | Msa0930790 | 0.901512 | 2.486808e-78 | -8.615850e-47 |
Msa0371490 | Msa0930890 | 0.802047 | 6.751018e-49 | -8.615850e-47 |
Msa0371490 | Msa0965800 | 0.811882 | 5.603924e-51 | -8.615850e-47 |
Msa0371490 | Msa1001620 | 0.824898 | 6.288862e-54 | -8.615850e-47 |
Msa0371490 | Msa1025200 | 0.855585 | 5.716984e-62 | -8.615850e-47 |
Msa0371490 | Msa1025220 | 0.870587 | 1.303558e-66 | -8.615850e-47 |
Msa0371490 | Msa1026710 | 0.803638 | 3.168394e-49 | -8.615850e-47 |
Msa0371490 | Msa1047020 | 0.841569 | 4.388394e-58 | -8.615850e-47 |
Msa0371490 | Msa1050100 | 0.827876 | 1.227852e-54 | -8.615850e-47 |
Msa0371490 | Msa1068660 | 0.855164 | 7.581862e-62 | -8.615850e-47 |
Msa0371490 | Msa1070810 | 0.803720 | 3.046842e-49 | -8.615850e-47 |
Msa0371490 | Msa1082050 | 0.859933 | 2.934443e-63 | -8.615850e-47 |
Msa0371490 | Msa1083370 | 0.800785 | 1.224298e-48 | -8.615850e-47 |
Msa0371490 | Msa1085850 | 0.854149 | 1.492165e-61 | -8.615850e-47 |
Msa0371490 | Msa1116940 | 0.836239 | 1.051184e-56 | -8.615850e-47 |
Msa0371490 | Msa1124980 | 0.822384 | 2.438441e-53 | -8.615850e-47 |
Msa0371490 | Msa1126690 | 0.885898 | 5.463653e-72 | -8.615850e-47 |
Msa0371490 | Msa1131030 | 0.816165 | 6.365988e-52 | -8.615850e-47 |
Msa0371490 | Msa1144610 | 0.819801 | 9.598282e-53 | -8.615850e-47 |
Msa0371490 | Msa1144630 | 0.811547 | 6.627875e-51 | -8.615850e-47 |
Msa0371490 | Msa1156830 | 0.888838 | 4.138879e-73 | -8.615850e-47 |
Msa0371490 | Msa1158630 | 0.806293 | 8.825579e-50 | -8.615850e-47 |
Msa0371490 | Msa1165640 | 0.835147 | 1.987172e-56 | -8.615850e-47 |
Msa0371490 | Msa1167360 | 0.826452 | 2.692204e-54 | -8.615850e-47 |
Msa0371490 | Msa1186030 | 0.810578 | 1.075301e-50 | -8.615850e-47 |
Msa0371490 | Msa1206240 | 0.818933 | 1.513441e-52 | -8.615850e-47 |
Msa0371490 | Msa1219760 | 0.805083 | 1.584389e-49 | -8.615850e-47 |
Msa0371490 | Msa1225040 | 0.808522 | 2.971479e-50 | -8.615850e-47 |
Msa0371490 | Msa1227350 | 0.806149 | 9.461981e-50 | -8.615850e-47 |
Msa0371490 | Msa1235950 | 0.868383 | 6.801817e-66 | -8.615850e-47 |
Msa0371490 | Msa1235980 | 0.877077 | 8.390016e-69 | -8.615850e-47 |
Msa0371490 | Msa1237040 | 0.871255 | 7.856614e-67 | -8.615850e-47 |
Msa0371490 | Msa1245270 | 0.854054 | 1.588783e-61 | -8.615850e-47 |
Msa0371490 | Msa1255850 | 0.806375 | 8.483072e-50 | -8.615850e-47 |
Msa0371490 | Msa1261970 | 0.802886 | 4.534238e-49 | -8.615850e-47 |
Msa0371490 | Msa1284060 | 0.828418 | 9.091134e-55 | -8.615850e-47 |
Msa0371490 | Msa1284800 | 0.837180 | 6.051834e-57 | -8.615850e-47 |
Msa0371490 | Msa1296090 | 0.829216 | 5.826983e-55 | -8.615850e-47 |
Msa0371490 | Msa1316100 | 0.845854 | 3.132339e-59 | -8.615850e-47 |
Msa0371490 | Msa1317390 | 0.897087 | 1.974298e-76 | -8.615850e-47 |
Msa0371490 | Msa1333370 | 0.805850 | 1.094034e-49 | -8.615850e-47 |
Msa0371490 | Msa1341780 | 0.832723 | 8.034448e-56 | -8.615850e-47 |
Msa0371490 | Msa1347610 | 0.809142 | 2.190055e-50 | -8.615850e-47 |
Msa0371490 | Msa1351020 | 0.899177 | 2.565944e-77 | -8.615850e-47 |
Msa0371490 | Msa1351910 | 0.800020 | 1.753268e-48 | -8.615850e-47 |
Msa0371490 | Msa1353300 | 0.829686 | 4.479867e-55 | -8.615850e-47 |
Msa0371490 | Msa1358710 | 0.816670 | 4.907160e-52 | -8.615850e-47 |
Msa0371490 | Msa1363910 | 0.856971 | 2.242171e-62 | -8.615850e-47 |
Msa0371490 | Msa1363930 | 0.813327 | 2.707338e-51 | -8.615850e-47 |
Msa0371490 | Msa1367540 | 0.823797 | 1.141490e-53 | -8.615850e-47 |
Msa0371490 | Msa1371410 | 0.806638 | 7.463804e-50 | -8.615850e-47 |
Msa0371490 | Msa1385480 | 0.828495 | 8.711075e-55 | -8.615850e-47 |
Msa0371490 | Msa1387750 | 0.871442 | 6.812245e-67 | -8.615850e-47 |
Msa0371490 | Msa1388890 | 0.812049 | 5.155502e-51 | -8.615850e-47 |
Msa0371490 | Msa1390760 | 0.894893 | 1.605589e-75 | -8.615850e-47 |
Msa0371490 | Msa1403520 | 0.840892 | 6.614279e-58 | -8.615850e-47 |
Msa0371490 | Msa1407550 | 0.866354 | 3.031748e-65 | -8.615850e-47 |
Msa0371490 | Msa1413570 | 0.867252 | 1.569456e-65 | -8.615850e-47 |
Msa0371490 | Msa1421510 | 0.818025 | 2.431323e-52 | -8.615850e-47 |
Msa0371490 | Msa1423050 | 0.820584 | 6.349461e-53 | -8.615850e-47 |
Msa0371490 | Msa1424570 | 0.854645 | 1.072406e-61 | -8.615850e-47 |
Msa0371490 | Msa1425070 | 0.814947 | 1.188562e-51 | -8.615850e-47 |
Msa0371490 | Msa1432310 | 0.873407 | 1.506167e-67 | -8.615850e-47 |
Msa0371490 | Msa1446410 | 0.839237 | 1.787190e-57 | -8.615850e-47 |
Msa0371490 | Msa1446510 | 0.844347 | 7.995619e-59 | -8.615850e-47 |
Msa0371490 | Msa1449160 | 0.838502 | 2.767825e-57 | -8.615850e-47 |
Msa0371490 | Msa1450560 | 0.899102 | 2.761178e-77 | -8.615850e-47 |
Msa0371490 | Msa1463570 | 0.842676 | 2.235550e-58 | -8.615850e-47 |
Msa0371490 | Msa1465700 | 0.880637 | 4.656877e-70 | -8.615850e-47 |
Msa0371490 | Msa1465890 | 0.822668 | 2.093871e-53 | -8.615850e-47 |
Msa0239420 | Msa0371490 | 0.872954 | 2.138406e-67 | -8.615850e-47 |
Msa0243750 | Msa0371490 | 0.809520 | 1.817245e-50 | -8.615850e-47 |
Msa0270160 | Msa0371490 | 0.863359 | 2.633725e-64 | -8.615850e-47 |
Msa0274940 | Msa0371490 | 0.846174 | 2.563742e-59 | -8.615850e-47 |
Msa0277600 | Msa0371490 | 0.894927 | 1.554822e-75 | -8.615850e-47 |
Msa0281330 | Msa0371490 | 0.836448 | 9.301981e-57 | -8.615850e-47 |
Msa0281370 | Msa0371490 | 0.860757 | 1.653295e-63 | -8.615850e-47 |
Msa0282290 | Msa0371490 | 0.810690 | 1.016954e-50 | -8.615850e-47 |
Msa0301250 | Msa0371490 | 0.887202 | 1.755502e-72 | -8.615850e-47 |
Msa0313060 | Msa0371490 | 0.902276 | 1.143567e-78 | -8.615850e-47 |
Msa0315430 | Msa0371490 | 0.849339 | 3.446246e-60 | -8.615850e-47 |
Msa0315660 | Msa0371490 | 0.850754 | 1.383658e-60 | -8.615850e-47 |
Msa0340560 | Msa0371490 | 0.851324 | 9.559171e-61 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0371490 | MtrunA17_Chr3g0118291 | 100.000 | 204 | 0 | 0 | 1 | 204 | 1 | 204 | 6.78e-150 | 414 |
Msa0371490 | MtrunA17_Chr2g0282541 | 99.510 | 204 | 1 | 0 | 1 | 204 | 49 | 252 | 1.89e-149 | 415 |
Msa0371490 | MtrunA17_Chr7g0224171 | 90.323 | 62 | 6 | 0 | 1 | 62 | 1 | 62 | 1.93e-35 | 120 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0371490 | AT4G16720.1 | 88.235 | 204 | 24 | 0 | 1 | 204 | 1 | 204 | 9.00e-122 | 343 |
Msa0371490 | AT4G17390.1 | 87.745 | 204 | 25 | 0 | 1 | 204 | 1 | 204 | 1.88e-121 | 342 |
Find 104 sgRNAs with CRISPR-Local
Find 306 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTGCATTATATCTAGATTT+TGG | 0.161408 | 3_1:-69628503 | Msa0371490:three_prime_UTR |
CAAATATTTCGAGGTCATTT+TGG | 0.206004 | 3_1:-69628781 | Msa0371490:CDS |
GTTTCCAAGGGTATTGTTTA+TGG | 0.211521 | 3_1:-69629031 | Msa0371490:CDS |
AACAACCAAAACGAGTTTCT+AGG | 0.272413 | 3_1:+69628438 | None:intergenic |
GACGGAAGCTTGGTGGTCTT+AGG | 0.284899 | 3_1:-69628934 | Msa0371490:CDS |
TCCTGACAAGGCTCGCCGTT+TGG | 0.286229 | 3_1:-69629878 | Msa0371490:CDS |
TTGGTGAGCCAGTTGATTCT+TGG | 0.307622 | 3_1:+69628726 | None:intergenic |
TAATGTTAGCTGCTGTAAAA+TGG | 0.315562 | 3_1:-69628149 | Msa0371490:three_prime_UTR |
CCTGACAAGGCTCGCCGTTT+GGG | 0.317524 | 3_1:-69629877 | Msa0371490:CDS |
AGTTCCCTGTGCTTGTGGAC+TGG | 0.331698 | 3_1:+69628702 | None:intergenic |
GTTCCCTGTGCTTGTGGACT+GGG | 0.349720 | 3_1:+69628703 | None:intergenic |
CATTATTGCAGCAACTCATT+TGG | 0.351164 | 3_1:-69628254 | Msa0371490:three_prime_UTR |
GAATAGATCAGCATCAATTA+AGG | 0.355242 | 3_1:+69628090 | None:intergenic |
TTAGGGTTCTCAATTCCTAC+TGG | 0.365103 | 3_1:-69628916 | Msa0371490:CDS |
TTCAAAGACAAACCGAGAAA+TGG | 0.370073 | 3_1:-69630125 | Msa0371490:exon |
TGGTGAGCCAGTTGATTCTT+GGG | 0.374689 | 3_1:+69628727 | None:intergenic |
TAAACAATACCCTTGGAAAC+TGG | 0.377401 | 3_1:+69629034 | None:intergenic |
CTCGGTTTGTCTTTGAATGA+TGG | 0.383887 | 3_1:+69630131 | None:intergenic |
GTCCATCCCGCAGGGCAAAC+TGG | 0.385467 | 3_1:-69628608 | Msa0371490:CDS |
TCTCTTCCAGTTTGCCCTGC+GGG | 0.386069 | 3_1:+69628602 | None:intergenic |
CATTGCCTAGAAACTCGTTT+TGG | 0.398184 | 3_1:-69628443 | Msa0371490:three_prime_UTR |
TGCGGGATGGACGGGCTTTG+TGG | 0.407354 | 3_1:+69628619 | None:intergenic |
TCATGCAACGTGTGAGGTGC+TGG | 0.410863 | 3_1:-69629948 | Msa0371490:CDS |
ATGGATGCATACCCATTTCT+CGG | 0.413861 | 3_1:+69630113 | None:intergenic |
TGCTCCTTTGAAACTTGAGT+TGG | 0.414015 | 3_1:+69628984 | None:intergenic |
AACGGTAACGGCGGAGAGAC+AGG | 0.416120 | 3_1:+69628571 | None:intergenic |
GTTTGCCCTGCGGGATGGAC+GGG | 0.417367 | 3_1:+69628611 | None:intergenic |
TAGCTCAGAAACATACTTGT+AGG | 0.420670 | 3_1:+69630002 | None:intergenic |
TGGGTAACTCCCTGGTTGGT+GGG | 0.428376 | 3_1:+69629004 | None:intergenic |
CCCAAACGGCGAGCCTTGTC+AGG | 0.428600 | 3_1:+69629877 | None:intergenic |
GGCTCGCCGTTTGGGTTACA+AGG | 0.429123 | 3_1:-69629869 | Msa0371490:CDS |
AGTTTGCCCTGCGGGATGGA+CGG | 0.430262 | 3_1:+69628610 | None:intergenic |
TTCAGGGATATGTTGTGTAC+CGG | 0.437893 | 3_1:-69629087 | Msa0371490:intron |
AATGACCTCGAAATATTTGA+AGG | 0.445755 | 3_1:+69628785 | None:intergenic |
GTCTTTGAATGATGGAGATT+AGG | 0.446218 | 3_1:+69630139 | None:intergenic |
CTTCGTGGTCTCACTTCTGC+TGG | 0.448020 | 3_1:-69628681 | Msa0371490:CDS |
CTTGTCAGGACGAGTGGGTC+TGG | 0.448800 | 3_1:+69629891 | None:intergenic |
ACGGAAGCTTGGTGGTCTTA+GGG | 0.449544 | 3_1:-69628933 | Msa0371490:CDS |
GTAGCGTCACAATGGTGCTC+AGG | 0.455850 | 3_1:-69628116 | Msa0371490:three_prime_UTR |
TCAAAGACAAACCGAGAAAT+GGG | 0.456349 | 3_1:-69630124 | Msa0371490:intron |
TTCCAGTTTGCCCTGCGGGA+TGG | 0.461159 | 3_1:+69628606 | None:intergenic |
CACGAAGTTCCCTGTGCTTG+TGG | 0.463265 | 3_1:+69628697 | None:intergenic |
ATGGACGGGCTTTGTGGTAA+CGG | 0.472327 | 3_1:+69628625 | None:intergenic |
TTGGGTAACTCCCTGGTTGG+TGG | 0.476932 | 3_1:+69629003 | None:intergenic |
GCTCCTTTGAAACTTGAGTT+GGG | 0.480540 | 3_1:+69628985 | None:intergenic |
TCTGGTGAGACGAACGATAG+AGG | 0.481896 | 3_1:+69629909 | None:intergenic |
TAGGCGCAGCAAACCCAGTA+AGG | 0.491524 | 3_1:+69630158 | None:intergenic |
TTCTACCTTCAAATATTTCG+AGG | 0.494616 | 3_1:-69628790 | Msa0371490:CDS |
CCAACCCAGTCCACAAGCAC+AGG | 0.501162 | 3_1:-69628707 | Msa0371490:CDS |
CGTGCTGGACGGAAGCTTGG+TGG | 0.501934 | 3_1:-69628941 | Msa0371490:CDS |
TACGCAGAGGTGGTAGGAAG+AGG | 0.502186 | 3_1:-69629057 | Msa0371490:CDS |
TTTGGGTTACAAGGCTAAGC+AGG | 0.502645 | 3_1:-69629860 | Msa0371490:intron |
ACAAAGCCCGTCCATCCCGC+AGG | 0.505243 | 3_1:-69628617 | Msa0371490:CDS |
ACAAGTATGTTTCTGAGCTA+TGG | 0.512701 | 3_1:-69629999 | Msa0371490:CDS |
GATATGTTGTGTACCGGGTG+AGG | 0.521531 | 3_1:-69629081 | Msa0371490:CDS |
GAGCGTGCTGGACGGAAGCT+TGG | 0.530059 | 3_1:-69628944 | Msa0371490:CDS |
CTTACCATAAACAATACCCT+TGG | 0.531543 | 3_1:+69629027 | None:intergenic |
CCTGTGCTTGTGGACTGGGT+TGG | 0.541785 | 3_1:+69628707 | None:intergenic |
TAGGAAGAGGCCAGTTTCCA+AGG | 0.541808 | 3_1:-69629044 | Msa0371490:CDS |
GCGAGCCTTGTCAGGACGAG+TGG | 0.547527 | 3_1:+69629885 | None:intergenic |
GAAATGACCCAAGAATCAAC+TGG | 0.550461 | 3_1:-69628734 | Msa0371490:CDS |
TTATGGTAAGCCCACCAACC+AGG | 0.550892 | 3_1:-69629014 | Msa0371490:CDS |
TGAGGGTACGCAGAGGTGGT+AGG | 0.551486 | 3_1:-69629063 | Msa0371490:CDS |
ACTTGAGTTGGGTAACTCCC+TGG | 0.551881 | 3_1:+69628996 | None:intergenic |
TCCGTCGCTGAAGAGCGTGC+TGG | 0.554588 | 3_1:-69628956 | Msa0371490:CDS |
AACAGAGGTTTGAGTGGCAA+GGG | 0.555360 | 3_1:-69628651 | Msa0371490:CDS |
TAGGGTTCTCAATTCCTACT+GGG | 0.560974 | 3_1:-69628915 | Msa0371490:CDS |
CAATTCCTACTGGGTCAATG+AGG | 0.563819 | 3_1:-69628906 | Msa0371490:intron |
CACCTCTGCGTACCCTCACC+CGG | 0.571516 | 3_1:+69629068 | None:intergenic |
TCAGGGATATGTTGTGTACC+GGG | 0.573183 | 3_1:-69629086 | Msa0371490:intron |
TTACCCAACTCAAGTTTCAA+AGG | 0.573525 | 3_1:-69628988 | Msa0371490:CDS |
AAATAACAAATGATCAAACA+AGG | 0.582529 | 3_1:+69628399 | None:intergenic |
TCCAGCACGCTCTTCAGCGA+CGG | 0.585150 | 3_1:+69628955 | None:intergenic |
AAACAGAGGTTTGAGTGGCA+AGG | 0.585660 | 3_1:-69628652 | Msa0371490:CDS |
TTCTCTTCCAGTTTGCCCTG+CGG | 0.587901 | 3_1:+69628601 | None:intergenic |
TAGCGTCACAATGGTGCTCA+GGG | 0.588976 | 3_1:-69628115 | Msa0371490:three_prime_UTR |
TCGCTGAAGAGCGTGCTGGA+CGG | 0.595062 | 3_1:-69628952 | Msa0371490:CDS |
CATGCAACGTGTGAGGTGCT+GGG | 0.596458 | 3_1:-69629947 | Msa0371490:CDS |
TCAAGTTTCAAAGGAGCAAG+AGG | 0.596680 | 3_1:-69628979 | Msa0371490:CDS |
CACAAGCACAGGGAACTTCG+TGG | 0.600876 | 3_1:-69628696 | Msa0371490:CDS |
CAGACCCACTCGTCCTGACA+AGG | 0.605906 | 3_1:-69629890 | Msa0371490:CDS |
TATGGTAAGCCCACCAACCA+GGG | 0.605988 | 3_1:-69629013 | Msa0371490:CDS |
GAGTTTCTAGGCAATGTCAC+AGG | 0.607208 | 3_1:+69628450 | None:intergenic |
CGGGTGAGGGTACGCAGAGG+TGG | 0.609715 | 3_1:-69629067 | Msa0371490:CDS |
TTCTAGGCAATGTCACAGGT+AGG | 0.614055 | 3_1:+69628454 | None:intergenic |
ATATGTTGTGTACCGGGTGA+GGG | 0.614513 | 3_1:-69629080 | Msa0371490:CDS |
TGCAGTAAAATCAACGGTAA+CGG | 0.618711 | 3_1:+69628559 | None:intergenic |
CAAAGCCCGTCCATCCCGCA+GGG | 0.619537 | 3_1:-69628616 | Msa0371490:CDS |
TCTAGGCAATGTCACAGGTA+GGG | 0.623163 | 3_1:+69628455 | None:intergenic |
GAGTTGGGTAACTCCCTGGT+TGG | 0.627619 | 3_1:+69629000 | None:intergenic |
AGGAAGAGGCCAGTTTCCAA+GGG | 0.629174 | 3_1:-69629043 | Msa0371490:CDS |
GCTTAGCCTTGTAACCCAAA+CGG | 0.629228 | 3_1:+69629863 | None:intergenic |
AATAACTGCAGTAAAATCAA+CGG | 0.631423 | 3_1:+69628553 | None:intergenic |
CAACCCAGTCCACAAGCACA+GGG | 0.632139 | 3_1:-69628706 | Msa0371490:CDS |
AAAGAAAACAGAGGTTTGAG+TGG | 0.633735 | 3_1:-69628657 | Msa0371490:CDS |
ATTCTCTTGTAGCGTCACAA+TGG | 0.636926 | 3_1:-69628124 | Msa0371490:three_prime_UTR |
ACGGTAACGGCGGAGAGACA+GGG | 0.637745 | 3_1:+69628572 | None:intergenic |
CGAGCCTTGTCAGGACGAGT+GGG | 0.641692 | 3_1:+69629886 | None:intergenic |
ACAAACCTCATTGACCCAGT+AGG | 0.645250 | 3_1:+69628901 | None:intergenic |
TCTGCTGGAAAAGAAAACAG+AGG | 0.661682 | 3_1:-69628666 | Msa0371490:CDS |
AATAACAAATGATCAAACAA+GGG | 0.663287 | 3_1:+69628400 | None:intergenic |
AGTAAAATCAACGGTAACGG+CGG | 0.665793 | 3_1:+69628562 | None:intergenic |
TACCGGGTGAGGGTACGCAG+AGG | 0.674254 | 3_1:-69629070 | Msa0371490:CDS |
TGCGATTCATGCAACGTGTG+AGG | 0.718067 | 3_1:-69629954 | Msa0371490:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATAAGTCATTTTTTTAAAA+TGG | - | chr3_1:69628602-69628621 | Msa0371490:CDS | 10.0% |
!!! | ATAAGTCATTTTTTTAAAAT+GGG | - | chr3_1:69628603-69628622 | Msa0371490:CDS | 10.0% |
!!! | TAAGTTTTAATATTATGTTT+TGG | - | chr3_1:69629885-69629904 | Msa0371490:CDS | 10.0% |
!!! | AATAAGTCATTTTTTTAAAA+TGG | - | chr3_1:69628602-69628621 | Msa0371490:CDS | 10.0% |
!!! | ATAAGTCATTTTTTTAAAAT+GGG | - | chr3_1:69628603-69628622 | Msa0371490:CDS | 10.0% |
!!! | TAAGTTTTAATATTATGTTT+TGG | - | chr3_1:69629885-69629904 | Msa0371490:CDS | 10.0% |
!! | AAATTTCATATTCATATAGA+AGG | - | chr3_1:69628767-69628786 | Msa0371490:CDS | 15.0% |
!!! | GTTTGTATTTTTATTTTTAC+TGG | - | chr3_1:69628942-69628961 | Msa0371490:CDS | 15.0% |
!! | AAATTTCATATTCATATAGA+AGG | - | chr3_1:69628767-69628786 | Msa0371490:CDS | 15.0% |
!!! | GTTTGTATTTTTATTTTTAC+TGG | - | chr3_1:69628942-69628961 | Msa0371490:CDS | 15.0% |
!!! | TATTGTTGTTATTTGTGAAT+AGG | - | chr3_1:69628225-69628244 | Msa0371490:intron | 20.0% |
!! | TACTAAGAATTAATCACTTA+GGG | - | chr3_1:69628496-69628515 | Msa0371490:three_prime_UTR | 20.0% |
!!! | TTTTTAAAATGGGTTTCAAA+TGG | - | chr3_1:69628613-69628632 | Msa0371490:CDS | 20.0% |
!! | ATCAGACATTAACAAAAATT+TGG | + | chr3_1:69628872-69628891 | None:intergenic | 20.0% |
!! | AATAACAAATGATCAAACAA+GGG | + | chr3_1:69629855-69629874 | None:intergenic | 20.0% |
!! | AAATAACAAATGATCAAACA+AGG | + | chr3_1:69629856-69629875 | None:intergenic | 20.0% |
!!! | TATTGTTGTTATTTGTGAAT+AGG | - | chr3_1:69628225-69628244 | Msa0371490:intron | 20.0% |
!! | TACTAAGAATTAATCACTTA+GGG | - | chr3_1:69628496-69628515 | Msa0371490:three_prime_UTR | 20.0% |
!!! | TTTTTAAAATGGGTTTCAAA+TGG | - | chr3_1:69628613-69628632 | Msa0371490:CDS | 20.0% |
!! | ATCAGACATTAACAAAAATT+TGG | + | chr3_1:69628872-69628891 | None:intergenic | 20.0% |
!! | AATAACAAATGATCAAACAA+GGG | + | chr3_1:69629855-69629874 | None:intergenic | 20.0% |
!! | AAATAACAAATGATCAAACA+AGG | + | chr3_1:69629856-69629875 | None:intergenic | 20.0% |
! | GTACTAAGAATTAATCACTT+AGG | - | chr3_1:69628495-69628514 | Msa0371490:three_prime_UTR | 25.0% |
!! | ACAAAAAATTGATAGTCTCT+AGG | + | chr3_1:69628836-69628855 | None:intergenic | 25.0% |
!!! | TAGAGACTATCAATTTTTTG+TGG | - | chr3_1:69628835-69628854 | Msa0371490:intron | 25.0% |
!!! | GTAATTGACAAATTTTAGCA+AGG | + | chr3_1:69629057-69629076 | None:intergenic | 25.0% |
! | AATAACTGCAGTAAAATCAA+CGG | + | chr3_1:69629702-69629721 | None:intergenic | 25.0% |
!! | AGTGCATTATATCTAGATTT+TGG | - | chr3_1:69629749-69629768 | Msa0371490:intron | 25.0% |
! | CAAATCAAAACAAAAAAGGA+AGG | + | chr3_1:69629921-69629940 | None:intergenic | 25.0% |
! | GTGTCAAATCAAAACAAAAA+AGG | + | chr3_1:69629925-69629944 | None:intergenic | 25.0% |
! | GTACTAAGAATTAATCACTT+AGG | - | chr3_1:69628495-69628514 | Msa0371490:three_prime_UTR | 25.0% |
!! | ACAAAAAATTGATAGTCTCT+AGG | + | chr3_1:69628836-69628855 | None:intergenic | 25.0% |
!!! | TAGAGACTATCAATTTTTTG+TGG | - | chr3_1:69628835-69628854 | Msa0371490:intron | 25.0% |
!!! | GTAATTGACAAATTTTAGCA+AGG | + | chr3_1:69629057-69629076 | None:intergenic | 25.0% |
! | AATAACTGCAGTAAAATCAA+CGG | + | chr3_1:69629702-69629721 | None:intergenic | 25.0% |
!! | AGTGCATTATATCTAGATTT+TGG | - | chr3_1:69629749-69629768 | Msa0371490:intron | 25.0% |
! | CAAATCAAAACAAAAAAGGA+AGG | + | chr3_1:69629921-69629940 | None:intergenic | 25.0% |
! | GTGTCAAATCAAAACAAAAA+AGG | + | chr3_1:69629925-69629944 | None:intergenic | 25.0% |
ATCATACAGAAACAAAAGCA+TGG | + | chr3_1:69628180-69628199 | None:intergenic | 30.0% | |
!! | ATTTGTTCTTGTTGATTCTC+TGG | - | chr3_1:69628451-69628470 | Msa0371490:three_prime_UTR | 30.0% |
!! | GCAAATCACAAATTTTAGCA+AGG | + | chr3_1:69628996-69629015 | None:intergenic | 30.0% |
CATGTTTACAAAATGAAGCA+AGG | + | chr3_1:69629118-69629137 | None:intergenic | 30.0% | |
TGTAATTGTCACATCATTTC+AGG | - | chr3_1:69629148-69629167 | Msa0371490:intron | 30.0% | |
GTAATTGTCACATCATTTCA+GGG | - | chr3_1:69629149-69629168 | Msa0371490:intron | 30.0% | |
GAACTAGTTGAAGTTCAATT+TGG | - | chr3_1:69629384-69629403 | Msa0371490:intron | 30.0% | |
TAGCACAAAACAAAACAATG+GGG | + | chr3_1:69629437-69629456 | None:intergenic | 30.0% | |
GTAGCACAAAACAAAACAAT+GGG | + | chr3_1:69629438-69629457 | None:intergenic | 30.0% | |
TGTAGCACAAAACAAAACAA+TGG | + | chr3_1:69629439-69629458 | None:intergenic | 30.0% | |
!!! | ATTGTTTTGTTTTGTGCTAC+AGG | - | chr3_1:69629438-69629457 | Msa0371490:intron | 30.0% |
TTCTACCTTCAAATATTTCG+AGG | - | chr3_1:69629462-69629481 | Msa0371490:intron | 30.0% | |
AATGACCTCGAAATATTTGA+AGG | + | chr3_1:69629470-69629489 | None:intergenic | 30.0% | |
! | CAAATATTTCGAGGTCATTT+TGG | - | chr3_1:69629471-69629490 | Msa0371490:intron | 30.0% |
!!! | TTTTGTGTTGCTTCATTTTC+TGG | - | chr3_1:69629720-69629739 | Msa0371490:intron | 30.0% |
ATCAAAACAAAAAAGGAAGG+CGG | + | chr3_1:69629918-69629937 | None:intergenic | 30.0% | |
! | TCCCTATTACTGCAAATTTT+TGG | - | chr3_1:69629950-69629969 | Msa0371490:CDS | 30.0% |
CCCAAAAATTTGCAGTAATA+GGG | + | chr3_1:69629954-69629973 | None:intergenic | 30.0% | |
! | CCCTATTACTGCAAATTTTT+GGG | - | chr3_1:69629951-69629970 | Msa0371490:CDS | 30.0% |
ACCCAAAAATTTGCAGTAAT+AGG | + | chr3_1:69629955-69629974 | None:intergenic | 30.0% | |
TAATGTTAGCTGCTGTAAAA+TGG | - | chr3_1:69630103-69630122 | Msa0371490:intron | 30.0% | |
ATCATACAGAAACAAAAGCA+TGG | + | chr3_1:69628180-69628199 | None:intergenic | 30.0% | |
!! | ATTTGTTCTTGTTGATTCTC+TGG | - | chr3_1:69628451-69628470 | Msa0371490:three_prime_UTR | 30.0% |
!! | GCAAATCACAAATTTTAGCA+AGG | + | chr3_1:69628996-69629015 | None:intergenic | 30.0% |
CATGTTTACAAAATGAAGCA+AGG | + | chr3_1:69629118-69629137 | None:intergenic | 30.0% | |
TGTAATTGTCACATCATTTC+AGG | - | chr3_1:69629148-69629167 | Msa0371490:intron | 30.0% | |
GTAATTGTCACATCATTTCA+GGG | - | chr3_1:69629149-69629168 | Msa0371490:intron | 30.0% | |
GAACTAGTTGAAGTTCAATT+TGG | - | chr3_1:69629384-69629403 | Msa0371490:intron | 30.0% | |
TAGCACAAAACAAAACAATG+GGG | + | chr3_1:69629437-69629456 | None:intergenic | 30.0% | |
GTAGCACAAAACAAAACAAT+GGG | + | chr3_1:69629438-69629457 | None:intergenic | 30.0% | |
TGTAGCACAAAACAAAACAA+TGG | + | chr3_1:69629439-69629458 | None:intergenic | 30.0% | |
!!! | ATTGTTTTGTTTTGTGCTAC+AGG | - | chr3_1:69629438-69629457 | Msa0371490:intron | 30.0% |
TTCTACCTTCAAATATTTCG+AGG | - | chr3_1:69629462-69629481 | Msa0371490:intron | 30.0% | |
AATGACCTCGAAATATTTGA+AGG | + | chr3_1:69629470-69629489 | None:intergenic | 30.0% | |
! | CAAATATTTCGAGGTCATTT+TGG | - | chr3_1:69629471-69629490 | Msa0371490:intron | 30.0% |
!!! | TTTTGTGTTGCTTCATTTTC+TGG | - | chr3_1:69629720-69629739 | Msa0371490:intron | 30.0% |
ATCAAAACAAAAAAGGAAGG+CGG | + | chr3_1:69629918-69629937 | None:intergenic | 30.0% | |
! | TCCCTATTACTGCAAATTTT+TGG | - | chr3_1:69629950-69629969 | Msa0371490:CDS | 30.0% |
CCCAAAAATTTGCAGTAATA+GGG | + | chr3_1:69629954-69629973 | None:intergenic | 30.0% | |
! | CCCTATTACTGCAAATTTTT+GGG | - | chr3_1:69629951-69629970 | Msa0371490:CDS | 30.0% |
ACCCAAAAATTTGCAGTAAT+AGG | + | chr3_1:69629955-69629974 | None:intergenic | 30.0% | |
TAATGTTAGCTGCTGTAAAA+TGG | - | chr3_1:69630103-69630122 | Msa0371490:intron | 30.0% | |
! | GTCTTTGAATGATGGAGATT+AGG | + | chr3_1:69628116-69628135 | None:intergenic | 35.0% |
TTCAAAGACAAACCGAGAAA+TGG | - | chr3_1:69628127-69628146 | Msa0371490:three_prime_UTR | 35.0% | |
TCAAAGACAAACCGAGAAAT+GGG | - | chr3_1:69628128-69628147 | Msa0371490:three_prime_UTR | 35.0% | |
TAGCTCAGAAACATACTTGT+AGG | + | chr3_1:69628253-69628272 | None:intergenic | 35.0% | |
! | ACAAGTATGTTTCTGAGCTA+TGG | - | chr3_1:69628253-69628272 | Msa0371490:three_prime_UTR | 35.0% |
TAAACCATGAACAGCAGAAT+AGG | + | chr3_1:69628671-69628690 | None:intergenic | 35.0% | |
ATGGTTTACTAGTTAACACC+TGG | - | chr3_1:69628683-69628702 | Msa0371490:CDS | 35.0% | |
TGGTTTACTAGTTAACACCT+GGG | - | chr3_1:69628684-69628703 | Msa0371490:CDS | 35.0% | |
TAAACAATACCCTTGGAAAC+TGG | + | chr3_1:69629221-69629240 | None:intergenic | 35.0% | |
!! | GTTTCCAAGGGTATTGTTTA+TGG | - | chr3_1:69629221-69629240 | Msa0371490:intron | 35.0% |
CTTACCATAAACAATACCCT+TGG | + | chr3_1:69629228-69629247 | None:intergenic | 35.0% | |
TTACCCAACTCAAGTTTCAA+AGG | - | chr3_1:69629264-69629283 | Msa0371490:intron | 35.0% | |
ACAAAACAAAACAATGGGGT+TGG | + | chr3_1:69629433-69629452 | None:intergenic | 35.0% | |
AAAGAAAACAGAGGTTTGAG+TGG | - | chr3_1:69629595-69629614 | Msa0371490:intron | 35.0% | |
TGCAGTAAAATCAACGGTAA+CGG | + | chr3_1:69629696-69629715 | None:intergenic | 35.0% | |
AACAACCAAAACGAGTTTCT+AGG | + | chr3_1:69629817-69629836 | None:intergenic | 35.0% | |
!!! | AATTTTTGGGTCTTCAAGCA+AGG | - | chr3_1:69629964-69629983 | Msa0371490:CDS | 35.0% |
CATTATTGCAGCAACTCATT+TGG | - | chr3_1:69629998-69630017 | Msa0371490:CDS | 35.0% | |
! | GTCTTTGAATGATGGAGATT+AGG | + | chr3_1:69628116-69628135 | None:intergenic | 35.0% |
TTCAAAGACAAACCGAGAAA+TGG | - | chr3_1:69628127-69628146 | Msa0371490:three_prime_UTR | 35.0% | |
TCAAAGACAAACCGAGAAAT+GGG | - | chr3_1:69628128-69628147 | Msa0371490:three_prime_UTR | 35.0% | |
TAGCTCAGAAACATACTTGT+AGG | + | chr3_1:69628253-69628272 | None:intergenic | 35.0% | |
! | ACAAGTATGTTTCTGAGCTA+TGG | - | chr3_1:69628253-69628272 | Msa0371490:three_prime_UTR | 35.0% |
TAAACCATGAACAGCAGAAT+AGG | + | chr3_1:69628671-69628690 | None:intergenic | 35.0% | |
ATGGTTTACTAGTTAACACC+TGG | - | chr3_1:69628683-69628702 | Msa0371490:CDS | 35.0% | |
TGGTTTACTAGTTAACACCT+GGG | - | chr3_1:69628684-69628703 | Msa0371490:CDS | 35.0% | |
TAAACAATACCCTTGGAAAC+TGG | + | chr3_1:69629221-69629240 | None:intergenic | 35.0% | |
!! | GTTTCCAAGGGTATTGTTTA+TGG | - | chr3_1:69629221-69629240 | Msa0371490:intron | 35.0% |
CTTACCATAAACAATACCCT+TGG | + | chr3_1:69629228-69629247 | None:intergenic | 35.0% | |
TTACCCAACTCAAGTTTCAA+AGG | - | chr3_1:69629264-69629283 | Msa0371490:intron | 35.0% | |
ACAAAACAAAACAATGGGGT+TGG | + | chr3_1:69629433-69629452 | None:intergenic | 35.0% | |
AAAGAAAACAGAGGTTTGAG+TGG | - | chr3_1:69629595-69629614 | Msa0371490:intron | 35.0% | |
TGCAGTAAAATCAACGGTAA+CGG | + | chr3_1:69629696-69629715 | None:intergenic | 35.0% | |
AACAACCAAAACGAGTTTCT+AGG | + | chr3_1:69629817-69629836 | None:intergenic | 35.0% | |
!!! | AATTTTTGGGTCTTCAAGCA+AGG | - | chr3_1:69629964-69629983 | Msa0371490:CDS | 35.0% |
CATTATTGCAGCAACTCATT+TGG | - | chr3_1:69629998-69630017 | Msa0371490:CDS | 35.0% | |
! | CTCGGTTTGTCTTTGAATGA+TGG | + | chr3_1:69628124-69628143 | None:intergenic | 40.0% |
ATGGATGCATACCCATTTCT+CGG | + | chr3_1:69628142-69628161 | None:intergenic | 40.0% | |
ATGGAGAATCGAAGAGTAGA+TGG | + | chr3_1:69628161-69628180 | None:intergenic | 40.0% | |
TCATCCTATTCTGCTGTTCA+TGG | - | chr3_1:69628664-69628683 | Msa0371490:CDS | 40.0% | |
TTTACTAGTTAACACCTGGG+TGG | - | chr3_1:69628687-69628706 | Msa0371490:CDS | 40.0% | |
TTACTAGTTAACACCTGGGT+GGG | - | chr3_1:69628688-69628707 | Msa0371490:CDS | 40.0% | |
GGGGCAGGAATTACAATAAT+TGG | - | chr3_1:69628708-69628727 | Msa0371490:CDS | 40.0% | |
TTCAGGGATATGTTGTGTAC+CGG | - | chr3_1:69629165-69629184 | Msa0371490:intron | 40.0% | |
!! | GCTCCTTTGAAACTTGAGTT+GGG | + | chr3_1:69629270-69629289 | None:intergenic | 40.0% |
!! | TGCTCCTTTGAAACTTGAGT+TGG | + | chr3_1:69629271-69629290 | None:intergenic | 40.0% |
TCAAGTTTCAAAGGAGCAAG+AGG | - | chr3_1:69629273-69629292 | Msa0371490:intron | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | - | chr3_1:69629336-69629355 | Msa0371490:intron | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | - | chr3_1:69629337-69629356 | Msa0371490:intron | 40.0% | |
TCAATTTGGTTGTGATGTGC+TGG | - | chr3_1:69629398-69629417 | Msa0371490:intron | 40.0% | |
GAAATGACCCAAGAATCAAC+TGG | - | chr3_1:69629518-69629537 | Msa0371490:intron | 40.0% | |
TCTGCTGGAAAAGAAAACAG+AGG | - | chr3_1:69629586-69629605 | Msa0371490:intron | 40.0% | |
! | AGTAAAATCAACGGTAACGG+CGG | + | chr3_1:69629693-69629712 | None:intergenic | 40.0% |
! | CATTGCCTAGAAACTCGTTT+TGG | - | chr3_1:69629809-69629828 | Msa0371490:intron | 40.0% |
ATTCTCTTGTAGCGTCACAA+TGG | - | chr3_1:69630128-69630147 | Msa0371490:exon | 40.0% | |
! | CTCGGTTTGTCTTTGAATGA+TGG | + | chr3_1:69628124-69628143 | None:intergenic | 40.0% |
ATGGATGCATACCCATTTCT+CGG | + | chr3_1:69628142-69628161 | None:intergenic | 40.0% | |
ATGGAGAATCGAAGAGTAGA+TGG | + | chr3_1:69628161-69628180 | None:intergenic | 40.0% | |
TCATCCTATTCTGCTGTTCA+TGG | - | chr3_1:69628664-69628683 | Msa0371490:CDS | 40.0% | |
TTTACTAGTTAACACCTGGG+TGG | - | chr3_1:69628687-69628706 | Msa0371490:CDS | 40.0% | |
TTACTAGTTAACACCTGGGT+GGG | - | chr3_1:69628688-69628707 | Msa0371490:CDS | 40.0% | |
GGGGCAGGAATTACAATAAT+TGG | - | chr3_1:69628708-69628727 | Msa0371490:CDS | 40.0% | |
TTCAGGGATATGTTGTGTAC+CGG | - | chr3_1:69629165-69629184 | Msa0371490:intron | 40.0% | |
!! | GCTCCTTTGAAACTTGAGTT+GGG | + | chr3_1:69629270-69629289 | None:intergenic | 40.0% |
!! | TGCTCCTTTGAAACTTGAGT+TGG | + | chr3_1:69629271-69629290 | None:intergenic | 40.0% |
TCAAGTTTCAAAGGAGCAAG+AGG | - | chr3_1:69629273-69629292 | Msa0371490:intron | 40.0% | |
TTAGGGTTCTCAATTCCTAC+TGG | - | chr3_1:69629336-69629355 | Msa0371490:intron | 40.0% | |
TAGGGTTCTCAATTCCTACT+GGG | - | chr3_1:69629337-69629356 | Msa0371490:intron | 40.0% | |
TCAATTTGGTTGTGATGTGC+TGG | - | chr3_1:69629398-69629417 | Msa0371490:intron | 40.0% | |
GAAATGACCCAAGAATCAAC+TGG | - | chr3_1:69629518-69629537 | Msa0371490:intron | 40.0% | |
TCTGCTGGAAAAGAAAACAG+AGG | - | chr3_1:69629586-69629605 | Msa0371490:intron | 40.0% | |
! | AGTAAAATCAACGGTAACGG+CGG | + | chr3_1:69629693-69629712 | None:intergenic | 40.0% |
! | CATTGCCTAGAAACTCGTTT+TGG | - | chr3_1:69629809-69629828 | Msa0371490:intron | 40.0% |
ATTCTCTTGTAGCGTCACAA+TGG | - | chr3_1:69630128-69630147 | Msa0371490:exon | 40.0% | |
!! | GCTTAGCCTTGTAACCCAAA+CGG | + | chr3_1:69628392-69628411 | None:intergenic | 45.0% |
! | TTTGGGTTACAAGGCTAAGC+AGG | - | chr3_1:69628392-69628411 | Msa0371490:three_prime_UTR | 45.0% |
TACTAGTTAACACCTGGGTG+GGG | - | chr3_1:69628689-69628708 | Msa0371490:CDS | 45.0% | |
GGTCTTGAGCAATGGTTCAA+AGG | + | chr3_1:69628804-69628823 | None:intergenic | 45.0% | |
! | CTGTACATGGTCTTGAGCAA+TGG | + | chr3_1:69628812-69628831 | None:intergenic | 45.0% |
CATTGCTCAAGACCATGTAC+AGG | - | chr3_1:69628810-69628829 | Msa0371490:intron | 45.0% | |
ATAGTCTCTAGGCCTGTACA+TGG | + | chr3_1:69628825-69628844 | None:intergenic | 45.0% | |
TCAGGGATATGTTGTGTACC+GGG | - | chr3_1:69629166-69629185 | Msa0371490:intron | 45.0% | |
ATATGTTGTGTACCGGGTGA+GGG | - | chr3_1:69629172-69629191 | Msa0371490:intron | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | - | chr3_1:69629346-69629365 | Msa0371490:intron | 45.0% | |
ACAAACCTCATTGACCCAGT+AGG | + | chr3_1:69629354-69629373 | None:intergenic | 45.0% | |
! | TGGTGAGCCAGTTGATTCTT+GGG | + | chr3_1:69629528-69629547 | None:intergenic | 45.0% |
! | TTGGTGAGCCAGTTGATTCT+TGG | + | chr3_1:69629529-69629548 | None:intergenic | 45.0% |
AAACAGAGGTTTGAGTGGCA+AGG | - | chr3_1:69629600-69629619 | Msa0371490:intron | 45.0% | |
AACAGAGGTTTGAGTGGCAA+GGG | - | chr3_1:69629601-69629620 | Msa0371490:intron | 45.0% | |
TCTAGGCAATGTCACAGGTA+GGG | + | chr3_1:69629800-69629819 | None:intergenic | 45.0% | |
TTCTAGGCAATGTCACAGGT+AGG | + | chr3_1:69629801-69629820 | None:intergenic | 45.0% | |
! | GAGTTTCTAGGCAATGTCAC+AGG | + | chr3_1:69629805-69629824 | None:intergenic | 45.0% |
!! | GCTTAGCCTTGTAACCCAAA+CGG | + | chr3_1:69628392-69628411 | None:intergenic | 45.0% |
! | TTTGGGTTACAAGGCTAAGC+AGG | - | chr3_1:69628392-69628411 | Msa0371490:three_prime_UTR | 45.0% |
TACTAGTTAACACCTGGGTG+GGG | - | chr3_1:69628689-69628708 | Msa0371490:CDS | 45.0% | |
GGTCTTGAGCAATGGTTCAA+AGG | + | chr3_1:69628804-69628823 | None:intergenic | 45.0% | |
! | CTGTACATGGTCTTGAGCAA+TGG | + | chr3_1:69628812-69628831 | None:intergenic | 45.0% |
CATTGCTCAAGACCATGTAC+AGG | - | chr3_1:69628810-69628829 | Msa0371490:intron | 45.0% | |
ATAGTCTCTAGGCCTGTACA+TGG | + | chr3_1:69628825-69628844 | None:intergenic | 45.0% | |
TCAGGGATATGTTGTGTACC+GGG | - | chr3_1:69629166-69629185 | Msa0371490:intron | 45.0% | |
ATATGTTGTGTACCGGGTGA+GGG | - | chr3_1:69629172-69629191 | Msa0371490:intron | 45.0% | |
CAATTCCTACTGGGTCAATG+AGG | - | chr3_1:69629346-69629365 | Msa0371490:intron | 45.0% | |
ACAAACCTCATTGACCCAGT+AGG | + | chr3_1:69629354-69629373 | None:intergenic | 45.0% | |
! | TGGTGAGCCAGTTGATTCTT+GGG | + | chr3_1:69629528-69629547 | None:intergenic | 45.0% |
! | TTGGTGAGCCAGTTGATTCT+TGG | + | chr3_1:69629529-69629548 | None:intergenic | 45.0% |
AAACAGAGGTTTGAGTGGCA+AGG | - | chr3_1:69629600-69629619 | Msa0371490:intron | 45.0% | |
AACAGAGGTTTGAGTGGCAA+GGG | - | chr3_1:69629601-69629620 | Msa0371490:intron | 45.0% | |
TCTAGGCAATGTCACAGGTA+GGG | + | chr3_1:69629800-69629819 | None:intergenic | 45.0% | |
TTCTAGGCAATGTCACAGGT+AGG | + | chr3_1:69629801-69629820 | None:intergenic | 45.0% | |
! | GAGTTTCTAGGCAATGTCAC+AGG | + | chr3_1:69629805-69629824 | None:intergenic | 45.0% |
TGCGATTCATGCAACGTGTG+AGG | - | chr3_1:69628298-69628317 | Msa0371490:three_prime_UTR | 50.0% | |
TCTGGTGAGACGAACGATAG+AGG | + | chr3_1:69628346-69628365 | None:intergenic | 50.0% | |
GATATGTTGTGTACCGGGTG+AGG | - | chr3_1:69629171-69629190 | Msa0371490:intron | 50.0% | |
TAGGAAGAGGCCAGTTTCCA+AGG | - | chr3_1:69629208-69629227 | Msa0371490:intron | 50.0% | |
AGGAAGAGGCCAGTTTCCAA+GGG | - | chr3_1:69629209-69629228 | Msa0371490:intron | 50.0% | |
TTATGGTAAGCCCACCAACC+AGG | - | chr3_1:69629238-69629257 | Msa0371490:intron | 50.0% | |
TATGGTAAGCCCACCAACCA+GGG | - | chr3_1:69629239-69629258 | Msa0371490:intron | 50.0% | |
!! | ACTTGAGTTGGGTAACTCCC+TGG | + | chr3_1:69629259-69629278 | None:intergenic | 50.0% |
! | ACGGAAGCTTGGTGGTCTTA+GGG | - | chr3_1:69629319-69629338 | Msa0371490:intron | 50.0% |
! | TTTGGTTGTGATGTGCTGGC+TGG | - | chr3_1:69629402-69629421 | Msa0371490:intron | 50.0% |
! | ATGGACGGGCTTTGTGGTAA+CGG | + | chr3_1:69629630-69629649 | None:intergenic | 50.0% |
TTCTCTTCCAGTTTGCCCTG+CGG | + | chr3_1:69629654-69629673 | None:intergenic | 50.0% | |
TAGCGTCACAATGGTGCTCA+GGG | - | chr3_1:69630137-69630156 | Msa0371490:five_prime_UTR | 50.0% | |
TGCGATTCATGCAACGTGTG+AGG | - | chr3_1:69628298-69628317 | Msa0371490:three_prime_UTR | 50.0% | |
TCTGGTGAGACGAACGATAG+AGG | + | chr3_1:69628346-69628365 | None:intergenic | 50.0% | |
GATATGTTGTGTACCGGGTG+AGG | - | chr3_1:69629171-69629190 | Msa0371490:intron | 50.0% | |
TAGGAAGAGGCCAGTTTCCA+AGG | - | chr3_1:69629208-69629227 | Msa0371490:intron | 50.0% | |
AGGAAGAGGCCAGTTTCCAA+GGG | - | chr3_1:69629209-69629228 | Msa0371490:intron | 50.0% | |
TTATGGTAAGCCCACCAACC+AGG | - | chr3_1:69629238-69629257 | Msa0371490:intron | 50.0% | |
TATGGTAAGCCCACCAACCA+GGG | - | chr3_1:69629239-69629258 | Msa0371490:intron | 50.0% | |
!! | ACTTGAGTTGGGTAACTCCC+TGG | + | chr3_1:69629259-69629278 | None:intergenic | 50.0% |
! | ACGGAAGCTTGGTGGTCTTA+GGG | - | chr3_1:69629319-69629338 | Msa0371490:intron | 50.0% |
! | TTTGGTTGTGATGTGCTGGC+TGG | - | chr3_1:69629402-69629421 | Msa0371490:intron | 50.0% |
! | ATGGACGGGCTTTGTGGTAA+CGG | + | chr3_1:69629630-69629649 | None:intergenic | 50.0% |
TTCTCTTCCAGTTTGCCCTG+CGG | + | chr3_1:69629654-69629673 | None:intergenic | 50.0% | |
TAGCGTCACAATGGTGCTCA+GGG | - | chr3_1:69630137-69630156 | Msa0371490:five_prime_UTR | 50.0% | |
TCATGCAACGTGTGAGGTGC+TGG | - | chr3_1:69628304-69628323 | Msa0371490:three_prime_UTR | 55.0% | |
! | CATGCAACGTGTGAGGTGCT+GGG | - | chr3_1:69628305-69628324 | Msa0371490:three_prime_UTR | 55.0% |
TTGTAATTCCTGCCCCACCC+AGG | + | chr3_1:69628704-69628723 | None:intergenic | 55.0% | |
TACGCAGAGGTGGTAGGAAG+AGG | - | chr3_1:69629195-69629214 | Msa0371490:intron | 55.0% | |
TGGGTAACTCCCTGGTTGGT+GGG | + | chr3_1:69629251-69629270 | None:intergenic | 55.0% | |
TTGGGTAACTCCCTGGTTGG+TGG | + | chr3_1:69629252-69629271 | None:intergenic | 55.0% | |
GAGTTGGGTAACTCCCTGGT+TGG | + | chr3_1:69629255-69629274 | None:intergenic | 55.0% | |
! | GACGGAAGCTTGGTGGTCTT+AGG | - | chr3_1:69629318-69629337 | Msa0371490:intron | 55.0% |
CAACCCAGTCCACAAGCACA+GGG | - | chr3_1:69629546-69629565 | Msa0371490:intron | 55.0% | |
GTTCCCTGTGCTTGTGGACT+GGG | + | chr3_1:69629552-69629571 | None:intergenic | 55.0% | |
AGTTCCCTGTGCTTGTGGAC+TGG | + | chr3_1:69629553-69629572 | None:intergenic | 55.0% | |
CACGAAGTTCCCTGTGCTTG+TGG | + | chr3_1:69629558-69629577 | None:intergenic | 55.0% | |
CACAAGCACAGGGAACTTCG+TGG | - | chr3_1:69629556-69629575 | Msa0371490:intron | 55.0% | |
CTTCGTGGTCTCACTTCTGC+TGG | - | chr3_1:69629571-69629590 | Msa0371490:intron | 55.0% | |
TCTCTTCCAGTTTGCCCTGC+GGG | + | chr3_1:69629653-69629672 | None:intergenic | 55.0% | |
GTAGCGTCACAATGGTGCTC+AGG | - | chr3_1:69630136-69630155 | Msa0371490:five_prime_UTR | 55.0% | |
TCATGCAACGTGTGAGGTGC+TGG | - | chr3_1:69628304-69628323 | Msa0371490:three_prime_UTR | 55.0% | |
! | CATGCAACGTGTGAGGTGCT+GGG | - | chr3_1:69628305-69628324 | Msa0371490:three_prime_UTR | 55.0% |
TTGTAATTCCTGCCCCACCC+AGG | + | chr3_1:69628704-69628723 | None:intergenic | 55.0% | |
TACGCAGAGGTGGTAGGAAG+AGG | - | chr3_1:69629195-69629214 | Msa0371490:intron | 55.0% | |
TGGGTAACTCCCTGGTTGGT+GGG | + | chr3_1:69629251-69629270 | None:intergenic | 55.0% | |
TTGGGTAACTCCCTGGTTGG+TGG | + | chr3_1:69629252-69629271 | None:intergenic | 55.0% | |
GAGTTGGGTAACTCCCTGGT+TGG | + | chr3_1:69629255-69629274 | None:intergenic | 55.0% | |
! | GACGGAAGCTTGGTGGTCTT+AGG | - | chr3_1:69629318-69629337 | Msa0371490:intron | 55.0% |
CAACCCAGTCCACAAGCACA+GGG | - | chr3_1:69629546-69629565 | Msa0371490:intron | 55.0% | |
GTTCCCTGTGCTTGTGGACT+GGG | + | chr3_1:69629552-69629571 | None:intergenic | 55.0% | |
AGTTCCCTGTGCTTGTGGAC+TGG | + | chr3_1:69629553-69629572 | None:intergenic | 55.0% | |
CACGAAGTTCCCTGTGCTTG+TGG | + | chr3_1:69629558-69629577 | None:intergenic | 55.0% | |
CACAAGCACAGGGAACTTCG+TGG | - | chr3_1:69629556-69629575 | Msa0371490:intron | 55.0% | |
CTTCGTGGTCTCACTTCTGC+TGG | - | chr3_1:69629571-69629590 | Msa0371490:intron | 55.0% | |
TCTCTTCCAGTTTGCCCTGC+GGG | + | chr3_1:69629653-69629672 | None:intergenic | 55.0% | |
GTAGCGTCACAATGGTGCTC+AGG | - | chr3_1:69630136-69630155 | Msa0371490:five_prime_UTR | 55.0% | |
CTTGTCAGGACGAGTGGGTC+TGG | + | chr3_1:69628364-69628383 | None:intergenic | 60.0% | |
CAGACCCACTCGTCCTGACA+AGG | - | chr3_1:69628362-69628381 | Msa0371490:three_prime_UTR | 60.0% | |
! | CGAGCCTTGTCAGGACGAGT+GGG | + | chr3_1:69628369-69628388 | None:intergenic | 60.0% |
TCCTGACAAGGCTCGCCGTT+TGG | - | chr3_1:69628374-69628393 | Msa0371490:three_prime_UTR | 60.0% | |
CCTGACAAGGCTCGCCGTTT+GGG | - | chr3_1:69628375-69628394 | Msa0371490:three_prime_UTR | 60.0% | |
! | GGCTCGCCGTTTGGGTTACA+AGG | - | chr3_1:69628383-69628402 | Msa0371490:three_prime_UTR | 60.0% |
AGTTAACACCTGGGTGGGGC+AGG | - | chr3_1:69628693-69628712 | Msa0371490:CDS | 60.0% | |
! | TGAGGGTACGCAGAGGTGGT+AGG | - | chr3_1:69629189-69629208 | Msa0371490:intron | 60.0% |
TCCAGCACGCTCTTCAGCGA+CGG | + | chr3_1:69629300-69629319 | None:intergenic | 60.0% | |
! | TCGCTGAAGAGCGTGCTGGA+CGG | - | chr3_1:69629300-69629319 | Msa0371490:intron | 60.0% |
!! | CCTGTGCTTGTGGACTGGGT+TGG | + | chr3_1:69629548-69629567 | None:intergenic | 60.0% |
CCAACCCAGTCCACAAGCAC+AGG | - | chr3_1:69629545-69629564 | Msa0371490:intron | 60.0% | |
AGTTTGCCCTGCGGGATGGA+CGG | + | chr3_1:69629645-69629664 | None:intergenic | 60.0% | |
TTCCAGTTTGCCCTGCGGGA+TGG | + | chr3_1:69629649-69629668 | None:intergenic | 60.0% | |
! | ACGGTAACGGCGGAGAGACA+GGG | + | chr3_1:69629683-69629702 | None:intergenic | 60.0% |
! | AACGGTAACGGCGGAGAGAC+AGG | + | chr3_1:69629684-69629703 | None:intergenic | 60.0% |
CTTGTCAGGACGAGTGGGTC+TGG | + | chr3_1:69628364-69628383 | None:intergenic | 60.0% | |
CAGACCCACTCGTCCTGACA+AGG | - | chr3_1:69628362-69628381 | Msa0371490:three_prime_UTR | 60.0% | |
! | CGAGCCTTGTCAGGACGAGT+GGG | + | chr3_1:69628369-69628388 | None:intergenic | 60.0% |
TCCTGACAAGGCTCGCCGTT+TGG | - | chr3_1:69628374-69628393 | Msa0371490:three_prime_UTR | 60.0% | |
CCTGACAAGGCTCGCCGTTT+GGG | - | chr3_1:69628375-69628394 | Msa0371490:three_prime_UTR | 60.0% | |
! | GGCTCGCCGTTTGGGTTACA+AGG | - | chr3_1:69628383-69628402 | Msa0371490:three_prime_UTR | 60.0% |
AGTTAACACCTGGGTGGGGC+AGG | - | chr3_1:69628693-69628712 | Msa0371490:CDS | 60.0% | |
! | TGAGGGTACGCAGAGGTGGT+AGG | - | chr3_1:69629189-69629208 | Msa0371490:intron | 60.0% |
TCCAGCACGCTCTTCAGCGA+CGG | + | chr3_1:69629300-69629319 | None:intergenic | 60.0% | |
! | TCGCTGAAGAGCGTGCTGGA+CGG | - | chr3_1:69629300-69629319 | Msa0371490:intron | 60.0% |
!! | CCTGTGCTTGTGGACTGGGT+TGG | + | chr3_1:69629548-69629567 | None:intergenic | 60.0% |
CCAACCCAGTCCACAAGCAC+AGG | - | chr3_1:69629545-69629564 | Msa0371490:intron | 60.0% | |
AGTTTGCCCTGCGGGATGGA+CGG | + | chr3_1:69629645-69629664 | None:intergenic | 60.0% | |
TTCCAGTTTGCCCTGCGGGA+TGG | + | chr3_1:69629649-69629668 | None:intergenic | 60.0% | |
! | ACGGTAACGGCGGAGAGACA+GGG | + | chr3_1:69629683-69629702 | None:intergenic | 60.0% |
! | AACGGTAACGGCGGAGAGAC+AGG | + | chr3_1:69629684-69629703 | None:intergenic | 60.0% |
! | GCGAGCCTTGTCAGGACGAG+TGG | + | chr3_1:69628370-69628389 | None:intergenic | 65.0% |
! | CCCAAACGGCGAGCCTTGTC+AGG | + | chr3_1:69628378-69628397 | None:intergenic | 65.0% |
! | TACCGGGTGAGGGTACGCAG+AGG | - | chr3_1:69629182-69629201 | Msa0371490:intron | 65.0% |
CACCTCTGCGTACCCTCACC+CGG | + | chr3_1:69629187-69629206 | None:intergenic | 65.0% | |
! | TCCGTCGCTGAAGAGCGTGC+TGG | - | chr3_1:69629296-69629315 | Msa0371490:intron | 65.0% |
GAGCGTGCTGGACGGAAGCT+TGG | - | chr3_1:69629308-69629327 | Msa0371490:intron | 65.0% | |
CGTGCTGGACGGAAGCTTGG+TGG | - | chr3_1:69629311-69629330 | Msa0371490:intron | 65.0% | |
! | TGCGGGATGGACGGGCTTTG+TGG | + | chr3_1:69629636-69629655 | None:intergenic | 65.0% |
ACAAAGCCCGTCCATCCCGC+AGG | - | chr3_1:69629635-69629654 | Msa0371490:intron | 65.0% | |
CAAAGCCCGTCCATCCCGCA+GGG | - | chr3_1:69629636-69629655 | Msa0371490:intron | 65.0% | |
GTTTGCCCTGCGGGATGGAC+GGG | + | chr3_1:69629644-69629663 | None:intergenic | 65.0% | |
GTCCATCCCGCAGGGCAAAC+TGG | - | chr3_1:69629644-69629663 | Msa0371490:intron | 65.0% | |
! | GCGAGCCTTGTCAGGACGAG+TGG | + | chr3_1:69628370-69628389 | None:intergenic | 65.0% |
! | CCCAAACGGCGAGCCTTGTC+AGG | + | chr3_1:69628378-69628397 | None:intergenic | 65.0% |
! | TACCGGGTGAGGGTACGCAG+AGG | - | chr3_1:69629182-69629201 | Msa0371490:intron | 65.0% |
CACCTCTGCGTACCCTCACC+CGG | + | chr3_1:69629187-69629206 | None:intergenic | 65.0% | |
! | TCCGTCGCTGAAGAGCGTGC+TGG | - | chr3_1:69629296-69629315 | Msa0371490:intron | 65.0% |
GAGCGTGCTGGACGGAAGCT+TGG | - | chr3_1:69629308-69629327 | Msa0371490:intron | 65.0% | |
CGTGCTGGACGGAAGCTTGG+TGG | - | chr3_1:69629311-69629330 | Msa0371490:intron | 65.0% | |
! | TGCGGGATGGACGGGCTTTG+TGG | + | chr3_1:69629636-69629655 | None:intergenic | 65.0% |
ACAAAGCCCGTCCATCCCGC+AGG | - | chr3_1:69629635-69629654 | Msa0371490:intron | 65.0% | |
CAAAGCCCGTCCATCCCGCA+GGG | - | chr3_1:69629636-69629655 | Msa0371490:intron | 65.0% | |
GTTTGCCCTGCGGGATGGAC+GGG | + | chr3_1:69629644-69629663 | None:intergenic | 65.0% | |
GTCCATCCCGCAGGGCAAAC+TGG | - | chr3_1:69629644-69629663 | Msa0371490:intron | 65.0% | |
! | CGGGTGAGGGTACGCAGAGG+TGG | - | chr3_1:69629185-69629204 | Msa0371490:intron | 70.0% |
! | CGGGTGAGGGTACGCAGAGG+TGG | - | chr3_1:69629185-69629204 | Msa0371490:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 69628097 | 69630177 | 69628097 | ID=Msa0371490;Name=Msa0371490 |
chr3_1 | mRNA | 69628097 | 69630177 | 69628097 | ID=Msa0371490-mRNA-1;Parent=Msa0371490;Name=Msa0371490-mRNA-1;_AED=0.01;_eAED=0.01;_QI=49|1|1|1|0.75|0.6|5|417|204 |
chr3_1 | exon | 69628097 | 69628188 | 69628097 | ID=Msa0371490-mRNA-1:exon:14922;Parent=Msa0371490-mRNA-1 |
chr3_1 | exon | 69628244 | 69628814 | 69628244 | ID=Msa0371490-mRNA-1:exon:14921;Parent=Msa0371490-mRNA-1 |
chr3_1 | exon | 69628907 | 69629104 | 69628907 | ID=Msa0371490-mRNA-1:exon:14920;Parent=Msa0371490-mRNA-1 |
chr3_1 | exon | 69629861 | 69630027 | 69629861 | ID=Msa0371490-mRNA-1:exon:14919;Parent=Msa0371490-mRNA-1 |
chr3_1 | exon | 69630125 | 69630177 | 69630125 | ID=Msa0371490-mRNA-1:exon:14918;Parent=Msa0371490-mRNA-1 |
chr3_1 | five_prime_UTR | 69630129 | 69630177 | 69630129 | ID=Msa0371490-mRNA-1:five_prime_utr;Parent=Msa0371490-mRNA-1 |
chr3_1 | CDS | 69630125 | 69630128 | 69630125 | ID=Msa0371490-mRNA-1:cds;Parent=Msa0371490-mRNA-1 |
chr3_1 | CDS | 69629861 | 69630027 | 69629861 | ID=Msa0371490-mRNA-1:cds;Parent=Msa0371490-mRNA-1 |
chr3_1 | CDS | 69628907 | 69629104 | 69628907 | ID=Msa0371490-mRNA-1:cds;Parent=Msa0371490-mRNA-1 |
chr3_1 | CDS | 69628569 | 69628814 | 69628569 | ID=Msa0371490-mRNA-1:cds;Parent=Msa0371490-mRNA-1 |
chr3_1 | three_prime_UTR | 69628244 | 69628568 | 69628244 | ID=Msa0371490-mRNA-1:three_prime_utr;Parent=Msa0371490-mRNA-1 |
chr3_1 | three_prime_UTR | 69628097 | 69628188 | 69628097 | ID=Msa0371490-mRNA-1:three_prime_utr;Parent=Msa0371490-mRNA-1 |
Gene Sequence |
Protein sequence |