AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1183900

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183900 MtrunA17_Chr8g0335351 99.222 771 6 0 1 771 1 771 0.0 1582
Msa1183900 MtrunA17_Chr7g0250631 77.749 773 158 7 1 771 1 761 0.0 1191
Msa1183900 MtrunA17_Chr2g0290691 69.048 504 134 6 276 771 115 604 0.0 699
Msa1183900 MtrunA17_Chr7g0227331 65.121 496 134 8 288 771 150 618 0.0 619
Msa1183900 MtrunA17_Chr6g0449401 58.969 524 152 7 287 771 180 679 0.0 608
Msa1183900 MtrunA17_Chr1g0179101 63.744 422 143 5 312 727 410 827 0.0 555
Msa1183900 MtrunA17_Chr7g0266031 58.584 466 179 7 265 721 383 843 0.0 553
Msa1183900 MtrunA17_Chr2g0309421 59.915 469 157 8 316 771 121 571 0.0 546
Msa1183900 MtrunA17_Chr8g0356291 59.770 435 156 6 345 771 101 524 5.16e-179 523
Msa1183900 MtrunA17_Chr3g0080101 63.706 394 130 5 338 722 380 769 2.95e-175 523
Msa1183900 MtrunA17_Chr4g0063311 55.750 400 154 6 341 721 62 457 3.49e-147 440
Msa1183900 MtrunA17_Chr2g0285711 48.090 445 185 8 302 721 2 425 1.58e-127 388
Msa1183900 MtrunA17_Chr2g0321101 52.604 384 147 5 350 714 67 434 2.38e-127 388
Msa1183900 MtrunA17_Chr8g0381091 49.487 390 166 6 345 721 52 423 2.12e-123 377
Msa1183900 MtrunA17_Chr2g0312641 46.763 417 175 11 317 720 37 419 6.03e-112 348
Msa1183900 MtrunA17_Chr8g0369091 46.457 381 159 4 345 725 572 907 4.89e-109 354
Msa1183900 MtrunA17_Chr4g0030361 43.133 415 181 4 317 724 247 613 7.37e-108 343
Msa1183900 MtrunA17_Chr2g0327561 44.769 411 189 4 333 742 588 961 2.20e-102 337
Msa1183900 MtrunA17_Chr8g0338741 39.005 382 183 12 367 727 15 367 2.21e-75 250
Msa1183900 MtrunA17_Chr4g0032761 39.678 373 194 10 367 721 10 369 6.40e-72 241
Msa1183900 MtrunA17_Chr2g0329011 39.216 357 180 7 367 721 12 333 6.72e-71 237
Msa1183900 MtrunA17_Chr7g0234641 35.792 366 205 8 367 722 8 353 7.82e-66 225
Msa1183900 MtrunA17_Chr5g0428981 35.693 339 172 6 372 709 763 1056 5.42e-54 202
Msa1183900 MtrunA17_Chr4g0018201 35.398 339 173 6 372 709 759 1052 9.60e-54 201
Msa1183900 MtrunA17_Chr6g0478601 34.463 354 187 6 369 721 108 417 2.52e-52 190
Msa1183900 MtrunA17_Chr3g0135951 33.983 359 194 11 360 709 82 406 9.19e-51 186
Msa1183900 MtrunA17_Chr1g0153321 32.432 407 226 11 360 757 96 462 1.10e-50 186
Msa1183900 MtrunA17_Chr1g0187581 32.345 371 201 9 360 720 105 435 1.10e-48 180
Msa1183900 MtrunA17_Chr1g0183651 31.892 370 203 10 360 720 108 437 1.56e-47 177
Msa1183900 MtrunA17_Chr7g0261491 33.240 358 193 10 360 709 108 427 1.23e-46 175
Msa1183900 MtrunA17_Chr1g0167351 32.853 347 193 8 367 709 105 415 1.86e-45 171
Msa1183900 MtrunA17_Chr2g0299781 31.034 377 211 9 360 724 101 440 8.78e-44 166
Msa1183900 MtrunA17_Chr1g0167311 30.670 388 217 11 367 739 110 460 3.65e-43 164
Msa1183900 MtrunA17_Chr7g0245031 39.869 153 90 1 367 519 143 293 3.51e-27 115
Msa1183900 MtrunA17_Chr7g0245031 44.248 113 60 2 598 709 299 409 3.46e-20 94.7
Msa1183900 MtrunA17_Chr1g0197721 35.323 201 114 5 369 563 48 238 6.11e-26 112
Msa1183900 MtrunA17_Chr1g0197721 32.836 134 84 3 591 720 203 334 8.86e-12 68.2
Msa1183900 MtrunA17_Chr4g0059751 37.037 162 89 3 367 519 84 241 5.01e-25 108
Msa1183900 MtrunA17_Chr4g0059751 38.596 114 67 2 598 710 247 358 1.45e-20 95.1
Msa1183900 MtrunA17_Chr2g0286501 27.019 322 158 7 369 689 46 291 5.01e-20 95.9
Msa1183900 MtrunA17_Chr3g0140631 34.868 152 97 1 369 520 34 183 3.46e-19 89.0
Msa1183900 MtrunA17_Chr3g0140631 34.259 108 67 1 597 704 185 288 6.75e-14 73.2
Msa1183900 MtrunA17_Chr8g0351491 25.364 343 175 9 363 705 7 268 5.64e-19 87.8
Msa1183900 MtrunA17_Chr3g0125381 38.393 112 65 1 594 705 100 207 5.83e-19 86.3
Msa1183900 MtrunA17_Chr4g0001331 24.405 336 176 8 369 704 17 274 7.68e-18 87.0
Msa1183900 MtrunA17_Chr4g0013131 33.121 157 102 1 363 519 3 156 9.05e-18 87.0
Msa1183900 MtrunA17_Chr3g0107011 31.126 151 101 1 369 519 11 158 2.94e-16 82.4
Msa1183900 MtrunA17_Chr2g0302431 31.313 198 115 5 359 537 7 202 3.00e-16 82.4
Msa1183900 MtrunA17_Chr8g0353621 33.333 150 98 1 372 521 10 157 5.21e-16 79.0
Msa1183900 MtrunA17_Chr8g0353621 38.614 101 58 1 603 703 164 260 2.25e-14 74.3
Msa1183900 MtrunA17_Chr3g0114511 33.333 156 99 2 364 519 24 174 9.54e-16 80.5
Msa1183900 MtrunA17_Chr4g0008561 24.595 370 187 14 376 736 23 309 1.09e-15 81.3
Msa1183900 MtrunA17_Chr1g0205421 34.177 158 97 3 363 518 3 155 1.33e-15 80.1
Msa1183900 MtrunA17_Chr7g0272841 33.742 163 99 5 372 528 68 227 1.43e-15 80.9
Msa1183900 MtrunA17_Chr2g0284031 32.680 153 100 1 367 519 26 175 2.24e-15 79.7
Msa1183900 MtrunA17_Chr5g0432471 29.801 151 103 2 369 519 9 156 3.03e-15 79.3
Msa1183900 MtrunA17_Chr1g0150321 26.269 335 167 11 372 705 13 268 3.05e-15 79.0
Msa1183900 MtrunA17_Chr8g0379091 30.159 189 115 3 367 553 21 194 4.29e-15 79.0
Msa1183900 MtrunA17_Chr2g0304111 30.387 181 119 3 372 552 23 196 6.60e-15 78.2
Msa1183900 MtrunA17_Chr1g0200601 34.756 164 95 5 361 520 25 180 7.63e-15 78.2
Msa1183900 MtrunA17_Chr4g0025671 28.289 152 107 2 369 519 5 155 8.78e-15 79.0
Msa1183900 MtrunA17_Chr1g0202831 33.540 161 93 5 370 523 409 562 1.02e-14 78.6
Msa1183900 MtrunA17_Chr1g0188031 32.026 153 100 3 369 519 17 167 1.05e-14 77.4
Msa1183900 MtrunA17_Chr7g0244521 30.968 155 104 2 365 519 5 156 1.18e-14 77.4
Msa1183900 MtrunA17_Chr5g0432491 33.784 148 96 2 372 519 23 168 1.35e-14 77.0
Msa1183900 MtrunA17_Chr2g0321841 27.632 152 108 2 369 519 1 151 1.50e-14 78.2
Msa1183900 MtrunA17_Chr3g0107051 31.757 148 98 1 372 519 21 165 1.54e-14 76.6
Msa1183900 MtrunA17_Chr5g0428031 28.415 183 112 5 372 537 9 189 1.65e-14 76.6
Msa1183900 MtrunA17_Chr1g0190831 28.289 152 107 2 369 519 1 151 2.93e-14 76.6
Msa1183900 MtrunA17_Chr4g0074811 37.662 154 88 6 372 520 91 241 3.24e-14 76.3
Msa1183900 MtrunA17_Chr8g0346071 28.994 169 118 2 372 540 17 183 3.73e-14 75.5
Msa1183900 MtrunA17_Chr6g0486661 33.333 126 76 4 600 720 912 1034 6.50e-14 75.9
Msa1183900 MtrunA17_Chr1g0190131 30.968 155 89 4 370 516 7 151 1.53e-13 71.6
Msa1183900 MtrunA17_Chr8g0385341 33.333 153 96 4 372 520 30 180 1.64e-13 73.9
Msa1183900 MtrunA17_Chr1g0173921 27.632 152 108 2 369 519 1 151 1.65e-13 74.7
Msa1183900 MtrunA17_Chr1g0185221 28.289 152 107 2 369 519 1 151 1.96e-13 73.9
Msa1183900 MtrunA17_Chr2g0284011 31.414 191 105 7 365 534 5 190 2.50e-13 73.2
Msa1183900 MtrunA17_Chr5g0419441 28.571 154 107 2 370 523 237 387 3.31e-13 73.6
Msa1183900 MtrunA17_Chr6g0453681 29.801 151 104 1 369 519 16 164 4.24e-13 72.4
Msa1183900 MtrunA17_Chr3g0132591 36.025 161 92 4 378 537 118 268 4.26e-13 72.4
Msa1183900 MtrunA17_Chr4g0074111 29.605 152 101 2 372 523 18 163 4.33e-13 72.0
Msa1183900 MtrunA17_Chr8g0386981 32.639 144 93 2 378 519 414 555 4.72e-13 73.2
Msa1183900 MtrunA17_Chr7g0260191 27.922 154 105 3 369 519 1 151 5.03e-13 72.8
Msa1183900 MtrunA17_Chr8g0346081 26.506 166 120 1 372 537 17 180 5.32e-13 72.0
Msa1183900 MtrunA17_Chr6g0468751 29.801 151 104 1 369 519 16 164 5.66e-13 72.0
Msa1183900 MtrunA17_Chr5g0444171 32.370 173 108 5 352 520 75 242 9.58e-13 71.6
Msa1183900 MtrunA17_Chr7g0258051 26.144 153 113 0 369 521 13 165 1.19e-12 71.6
Msa1183900 MtrunA17_Chr4g0000431 28.723 188 121 5 367 553 19 194 1.32e-12 71.2
Msa1183900 MtrunA17_Chr7g0274941 30.263 152 101 3 367 516 11 159 1.37e-12 69.3
Msa1183900 MtrunA17_Chr1g0203881 32.237 152 97 3 372 519 41 190 1.65e-12 70.9
Msa1183900 MtrunA17_Chr3g0091311 31.410 156 104 2 364 519 4 156 2.00e-12 68.2
Msa1183900 MtrunA17_Chr5g0448721 32.680 153 97 4 372 520 96 246 2.14e-12 70.5
Msa1183900 MtrunA17_Chr1g0176421 33.121 157 101 4 372 526 161 315 2.14e-12 70.5
Msa1183900 MtrunA17_Chr4g0063881 29.167 144 100 1 376 519 15 156 3.37e-12 69.3
Msa1183900 MtrunA17_Chr2g0317001 26.230 183 124 3 370 552 13 184 4.60e-12 69.7
Msa1183900 MtrunA17_Chr3g0091281 31.395 172 106 5 364 528 4 170 4.72e-12 66.6
Msa1183900 MtrunA17_Chr5g0441011 29.375 160 106 3 360 519 6 158 5.04e-12 68.9
Msa1183900 MtrunA17_Chr1g0173541 31.034 174 116 4 355 526 35 206 5.36e-12 68.9
Msa1183900 MtrunA17_Chr4g0047191 34.653 101 66 0 419 519 94 194 5.85e-12 68.2
Msa1183900 MtrunA17_Chr4g0047211 34.653 101 66 0 419 519 89 189 6.58e-12 67.8
Msa1183900 MtrunA17_Chr1g0188991 27.604 192 124 5 372 562 15 192 7.23e-12 68.9
Msa1183900 MtrunA17_Chr1g0170281 32.026 153 98 4 372 520 118 268 7.58e-12 68.9
Msa1183900 MtrunA17_Chr8g0345801 32.558 129 84 2 377 505 20 145 7.67e-12 66.6
Msa1183900 MtrunA17_Chr5g0441691 32.026 153 98 5 372 520 68 218 7.84e-12 68.6
Msa1183900 MtrunA17_Chr8g0384301 29.825 171 113 5 369 536 296 462 9.55e-12 68.6
Msa1183900 MtrunA17_Chr7g0257751 32.258 155 99 4 370 520 56 208 1.42e-11 67.8
Msa1183900 MtrunA17_Chr8g0388891 24.904 261 174 9 265 519 37 281 1.86e-11 66.6
Msa1183900 MtrunA17_Chr3g0098951 31.765 170 107 6 355 520 70 234 1.89e-11 67.4
Msa1183900 MtrunA17_Chr3g0130151 31.507 146 96 2 376 519 248 391 1.89e-11 67.8
Msa1183900 MtrunA17_Chr1g0166101 29.605 152 104 2 369 519 21 170 1.99e-11 67.0
Msa1183900 MtrunA17_Chr7g0267751 31.818 154 97 4 372 520 135 285 2.38e-11 67.4
Msa1183900 MtrunA17_Chr4g0059951 33.333 153 96 4 372 520 73 223 2.59e-11 67.0
Msa1183900 MtrunA17_Chr7g0256001 29.843 191 118 6 369 552 138 319 2.95e-11 67.0
Msa1183900 MtrunA17_Chr2g0276831 32.927 164 95 6 365 521 3 158 3.14e-11 65.9
Msa1183900 MtrunA17_Chr5g0405421 29.605 152 103 2 372 519 99 250 3.89e-11 66.6
Msa1183900 MtrunA17_Chr1g0170551 33.019 106 65 2 603 708 162 261 4.09e-11 67.0
Msa1183900 MtrunA17_Chr4g0038501 25.806 186 130 2 372 557 20 197 8.51e-11 65.9
Msa1183900 MtrunA17_Chr2g0333821 30.464 151 102 2 369 519 11 158 8.82e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1183900 AT2G44830.2 65.234 791 226 21 1 771 4 765 0.0 946
Msa1183900 AT2G44830.3 65.234 791 226 21 1 771 4 765 0.0 946
Msa1183900 AT2G44830.1 65.234 791 226 21 1 771 4 765 0.0 946
Msa1183900 AT5G47750.1 67.054 516 146 6 266 771 85 586 0.0 685
Msa1183900 AT4G26610.1 72.066 426 115 3 305 727 55 479 0.0 640
Msa1183900 AT5G55910.2 68.615 462 125 7 315 771 52 498 0.0 625
Msa1183900 AT5G55910.1 68.615 462 125 7 315 771 52 498 0.0 625
Msa1183900 AT5G40030.1 63.170 448 140 9 331 771 70 499 0.0 570
Msa1183900 AT3G27580.2 60.677 473 165 7 309 771 117 578 0.0 554
Msa1183900 AT3G27580.1 60.677 473 165 7 309 771 117 578 0.0 554
Msa1183900 AT1G79250.1 69.509 387 110 5 344 725 118 501 0.0 549
Msa1183900 AT1G79250.3 69.509 387 110 5 344 725 118 501 0.0 549
Msa1183900 AT1G79250.2 69.509 387 110 5 344 725 118 501 0.0 549
Msa1183900 AT1G79250.4 69.509 387 110 5 344 725 118 501 0.0 549
Msa1183900 AT3G12690.1 60.440 455 146 6 332 771 142 577 0.0 542
Msa1183900 AT3G12690.3 60.440 455 146 6 332 771 142 577 0.0 542
Msa1183900 AT3G12690.2 60.440 455 146 6 332 771 142 577 0.0 542
Msa1183900 AT3G52890.2 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1183900 AT3G52890.4 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1183900 AT3G52890.1 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1183900 AT3G52890.3 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1183900 AT1G16440.1 61.048 439 134 7 345 771 86 499 1.94e-179 523
Msa1183900 AT2G36350.1 59.819 443 141 9 343 771 530 949 6.64e-177 532
Msa1183900 AT5G03640.2 59.674 429 143 7 310 721 480 895 1.39e-172 521
Msa1183900 AT5G03640.1 59.674 429 143 7 310 721 480 895 1.39e-172 521
Msa1183900 AT2G26700.1 46.091 486 206 10 290 722 1 483 7.33e-133 404
Msa1183900 AT2G34650.1 52.284 394 153 9 345 728 50 418 5.00e-129 392
Msa1183900 AT3G44610.1 52.973 370 132 6 372 715 71 424 6.24e-126 384
Msa1183900 AT5G58140.6 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1183900 AT5G58140.7 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1183900 AT5G58140.5 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1183900 AT5G58140.2 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1183900 AT5G58140.1 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1183900 AT3G14370.1 46.194 381 173 6 347 722 61 414 2.31e-107 337
Msa1183900 AT5G58140.3 46.631 371 153 3 346 716 551 876 1.01e-105 345
Msa1183900 AT3G45780.2 45.926 405 175 5 321 724 611 972 4.47e-104 342
Msa1183900 AT3G45780.1 45.926 405 175 5 321 724 611 972 4.47e-104 342
Msa1183900 AT1G53700.1 44.675 385 168 7 347 720 66 416 2.25e-101 321
Msa1183900 AT1G51170.1 39.782 367 184 9 367 721 17 358 4.64e-73 244
Msa1183900 AT3G20830.1 40.054 367 187 10 366 721 15 359 5.27e-69 233
Msa1183900 AT4G13000.1 37.119 361 190 8 367 723 15 342 4.29e-68 229
Msa1183900 AT3G25250.1 37.398 369 188 9 367 723 12 349 1.20e-67 230
Msa1183900 AT1G45160.2 35.989 364 181 7 362 723 661 974 8.07e-55 205
Msa1183900 AT1G45160.1 35.989 364 181 7 362 723 661 974 1.78e-54 204
Msa1183900 AT1G30640.2 33.604 369 204 9 360 722 108 441 4.46e-51 188
Msa1183900 AT1G30640.1 33.604 369 204 9 360 722 108 441 4.46e-51 188
Msa1183900 AT1G48490.4 36.467 351 171 11 360 709 818 1117 5.44e-51 193
Msa1183900 AT1G48490.3 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1183900 AT1G48490.2 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1183900 AT1G48490.1 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1183900 AT1G30640.3 33.604 369 204 9 360 722 15 348 6.36e-51 185
Msa1183900 AT5G62310.1 34.795 342 178 7 369 709 751 1048 4.33e-50 191
Msa1183900 AT3G17850.1 34.795 342 178 6 369 709 879 1176 2.23e-49 189
Msa1183900 AT5G09890.2 32.955 352 202 6 360 709 90 409 3.74e-49 181
Msa1183900 AT5G09890.1 32.955 352 202 6 360 709 90 409 4.01e-49 181
Msa1183900 AT4G33080.2 33.053 357 201 9 360 709 82 407 6.70e-49 181
Msa1183900 AT4G33080.1 33.053 357 201 9 360 709 82 407 7.82e-49 181
Msa1183900 AT1G03920.2 33.613 357 195 9 360 712 12 330 1.22e-47 176
Msa1183900 AT2G20470.3 32.493 357 198 8 360 712 112 429 1.89e-47 177
Msa1183900 AT2G20470.2 32.493 357 198 8 360 712 112 429 3.45e-47 177
Msa1183900 AT2G20470.1 32.493 357 198 8 360 712 112 429 3.45e-47 177
Msa1183900 AT1G03920.1 33.613 357 195 9 360 712 125 443 4.06e-47 177
Msa1183900 AT1G03920.3 33.613 357 195 9 360 712 125 443 4.06e-47 177
Msa1183900 AT4G14350.2 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1183900 AT4G14350.1 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1183900 AT4G14350.4 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1183900 AT4G14350.3 31.667 360 205 9 367 722 114 436 2.22e-44 168
Msa1183900 AT3G23310.1 31.805 349 195 9 367 709 115 426 6.86e-44 167
Msa1183900 AT2G19400.1 32.213 357 203 11 361 709 94 419 3.29e-39 153
Msa1183900 AT5G58140.4 48.092 131 68 0 346 476 551 681 2.00e-32 134
Msa1183900 AT3G08720.1 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1183900 AT3G08720.1 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1183900 AT3G08720.3 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1183900 AT3G08720.3 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1183900 AT3G08720.4 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1183900 AT3G08720.4 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1183900 AT3G08720.2 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1183900 AT3G08720.2 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1183900 AT3G08730.1 38.710 155 93 1 365 519 127 279 3.54e-27 116
Msa1183900 AT3G08730.1 44.531 128 62 4 599 720 286 410 2.70e-24 107
Msa1183900 AT3G08730.2 38.710 155 93 1 365 519 127 279 3.54e-27 116
Msa1183900 AT3G08730.2 44.531 128 62 4 599 720 286 410 2.70e-24 107
Msa1183900 AT5G04510.2 33.503 197 117 3 372 563 44 231 1.03e-24 107
Msa1183900 AT5G04510.2 34.483 145 88 4 591 730 196 338 3.70e-18 88.2
Msa1183900 AT5G04510.1 33.503 197 117 3 372 563 44 231 1.13e-24 108
Msa1183900 AT5G04510.1 34.483 145 88 4 591 730 196 338 4.30e-18 88.6
Msa1183900 AT5G04510.3 37.931 145 88 1 372 516 44 186 2.36e-24 104
Msa1183900 AT3G10540.1 32.995 197 118 3 372 563 45 232 5.42e-24 107
Msa1183900 AT3G10540.1 33.333 165 99 5 591 750 197 355 9.25e-19 90.9
Msa1183900 AT5G18700.1 39.073 151 84 3 369 519 1 143 8.94e-22 102
Msa1183900 AT2G20050.1 38.655 119 67 4 597 712 931 1046 5.95e-18 89.4
Msa1183900 AT2G20050.2 38.655 119 67 4 597 712 928 1043 6.31e-18 89.4
Msa1183900 AT2G25880.1 35.762 151 95 1 370 520 23 171 1.20e-17 84.7
Msa1183900 AT2G25880.1 36.111 108 65 1 597 704 173 276 1.30e-14 75.5
Msa1183900 AT4G32830.1 34.868 152 97 1 369 520 28 177 2.35e-17 84.0
Msa1183900 AT4G32830.1 36.111 108 65 1 597 704 179 282 4.25e-14 74.3
Msa1183900 AT2G25880.4 35.762 151 95 1 370 520 36 184 2.79e-17 84.0
Msa1183900 AT2G25880.4 36.111 108 65 1 597 704 186 289 1.59e-14 75.5
Msa1183900 AT2G45490.1 32.258 155 103 2 369 523 19 171 3.12e-17 83.6
Msa1183900 AT2G45490.1 37.037 108 64 1 597 704 170 273 5.21e-17 82.8
Msa1183900 AT2G45490.2 32.258 155 103 2 369 523 19 171 4.07e-17 82.4
Msa1183900 AT2G45490.2 35.294 85 55 0 597 681 170 254 3.12e-11 65.1
Msa1183900 AT5G57630.2 32.461 191 103 7 365 534 2 187 4.49e-17 84.7
Msa1183900 AT5G57630.1 32.461 191 103 7 365 534 2 187 4.98e-17 84.7
Msa1183900 AT5G45820.1 33.121 157 102 2 363 519 3 156 5.40e-17 84.7
Msa1183900 AT2G25880.3 35.762 151 95 1 370 520 84 232 5.62e-17 83.6
Msa1183900 AT2G25880.3 36.449 107 64 1 597 703 234 336 3.41e-14 75.1
Msa1183900 AT1G35670.1 36.585 164 92 5 361 520 21 176 1.24e-16 84.0
Msa1183900 AT3G04810.2 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1183900 AT3G04810.1 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1183900 AT3G04810.3 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1183900 AT1G12680.1 34.356 163 96 4 376 537 111 263 3.43e-16 82.4
Msa1183900 AT4G18700.1 32.680 153 100 1 367 519 21 170 5.37e-16 82.0
Msa1183900 AT4G24400.1 31.757 148 99 1 372 519 9 154 6.01e-16 81.6
Msa1183900 AT1G29230.1 32.642 193 112 5 363 553 66 242 6.72e-16 82.0
Msa1183900 AT4G24400.2 31.757 148 99 1 372 519 9 154 6.79e-16 81.3
Msa1183900 AT5G28290.1 29.605 152 105 2 369 519 1 151 1.19e-15 81.3
Msa1183900 AT5G28290.2 29.605 152 105 2 369 519 1 151 1.19e-15 81.3
Msa1183900 AT5G28290.3 29.605 152 105 2 369 519 1 151 1.26e-15 81.3
Msa1183900 AT5G45810.1 31.373 153 102 1 367 519 23 172 2.13e-15 80.1
Msa1183900 AT1G54510.4 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1183900 AT1G54510.2 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1183900 AT1G54510.1 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1183900 AT1G54510.3 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1183900 AT5G25110.1 31.788 151 100 2 369 519 40 187 5.57e-15 79.0
Msa1183900 AT3G06030.1 32.240 183 105 6 352 528 58 227 5.69e-15 79.3
Msa1183900 AT4G14580.1 24.242 330 174 8 365 692 14 269 6.12e-15 78.2
Msa1183900 AT3G44200.2 28.947 152 106 2 369 519 5 155 6.20e-15 79.7
Msa1183900 AT3G44200.1 28.947 152 106 2 369 519 5 155 6.20e-15 79.7
Msa1183900 AT2G25880.2 36.111 108 65 1 597 704 141 244 7.67e-15 75.9
Msa1183900 AT2G34180.1 31.875 160 106 1 361 520 46 202 8.25e-15 78.6
Msa1183900 AT3G63280.2 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1183900 AT3G63280.3 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1183900 AT3G63280.1 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1183900 AT4G09570.1 35.366 164 94 5 361 520 20 175 9.97e-15 78.2
Msa1183900 AT3G01090.3 31.126 151 102 1 369 519 16 164 1.21e-14 77.8
Msa1183900 AT3G01090.1 31.126 151 102 1 369 519 16 164 1.21e-14 77.8
Msa1183900 AT2G30360.1 32.704 159 98 4 364 519 15 167 1.37e-14 77.4
Msa1183900 AT5G10930.1 35.762 151 89 6 372 519 12 157 1.42e-14 77.4
Msa1183900 AT3G01090.2 31.126 151 102 1 369 519 39 187 1.50e-14 77.8
Msa1183900 AT3G63280.4 28.387 155 109 2 366 519 52 205 1.68e-14 77.8
Msa1183900 AT2G25090.1 31.606 193 124 6 363 553 6 192 2.66e-14 76.6
Msa1183900 AT3G29160.3 31.788 151 101 2 369 519 17 165 2.79e-14 75.5
Msa1183900 AT5G01810.1 34.591 159 97 4 363 519 3 156 3.83e-14 75.9
Msa1183900 AT5G01810.2 34.591 159 97 4 363 519 3 156 3.83e-14 75.9
Msa1183900 AT3G29160.1 31.788 151 101 2 369 519 17 165 4.16e-14 76.3
Msa1183900 AT3G29160.2 31.788 151 101 2 369 519 17 165 4.16e-14 76.3
Msa1183900 AT1G53570.7 29.825 171 115 3 368 536 210 377 4.47e-14 76.3
Msa1183900 AT5G21326.1 25.155 322 164 11 372 691 13 259 4.51e-14 75.9
Msa1183900 AT5G01810.3 34.591 159 97 4 363 519 3 156 4.59e-14 75.1
Msa1183900 AT1G53570.6 29.825 171 115 3 368 536 210 377 5.17e-14 75.9
Msa1183900 AT1G53570.1 29.825 171 115 3 368 536 210 377 6.15e-14 75.9
Msa1183900 AT1G53570.2 29.825 171 115 3 368 536 210 377 6.30e-14 75.9
Msa1183900 AT1G53570.3 29.825 171 115 3 368 536 210 377 6.30e-14 75.9
Msa1183900 AT1G09000.1 29.448 163 108 3 372 529 69 229 6.35e-14 75.9
Msa1183900 AT1G53570.4 29.825 171 115 3 368 536 210 377 6.41e-14 75.9
Msa1183900 AT1G09000.2 29.448 163 108 3 372 529 69 229 6.71e-14 75.9
Msa1183900 AT1G54960.1 29.012 162 108 3 372 528 68 227 7.03e-14 75.9
Msa1183900 AT1G54960.2 29.012 162 108 3 372 528 68 227 7.03e-14 75.9
Msa1183900 AT3G17510.1 31.788 151 101 2 369 519 17 165 7.99e-14 75.1
Msa1183900 AT4G04720.2 32.370 173 105 4 358 520 60 230 1.00e-13 75.1
Msa1183900 AT4G04720.1 32.370 173 105 4 358 520 60 230 1.00e-13 75.1
Msa1183900 AT1G30270.1 29.012 162 109 2 369 530 28 183 1.76e-13 73.9
Msa1183900 AT2G26980.1 30.405 148 101 2 372 519 14 159 2.07e-13 73.2
Msa1183900 AT2G26980.3 30.405 148 101 2 372 519 14 159 2.51e-13 73.6
Msa1183900 AT1G30270.2 29.012 162 109 2 369 530 28 183 2.56e-13 73.6
Msa1183900 AT2G26980.4 30.405 148 101 2 372 519 24 169 2.69e-13 73.6
Msa1183900 AT3G10660.2 33.987 153 95 4 372 520 186 336 2.78e-13 73.9
Msa1183900 AT3G10660.1 33.987 153 95 4 372 520 186 336 2.78e-13 73.9
Msa1183900 AT5G39440.1 32.450 151 100 2 369 519 16 164 2.79e-13 73.6
Msa1183900 AT1G69220.1 29.870 154 105 2 370 523 247 397 3.11e-13 73.9
Msa1183900 AT3G20860.1 27.815 151 108 1 369 519 1 150 3.32e-13 72.8
Msa1183900 AT2G26980.2 31.250 144 97 2 376 519 18 159 3.97e-13 70.9
Msa1183900 AT2G26980.5 29.801 151 104 2 369 519 11 159 4.77e-13 72.4
Msa1183900 AT2G41860.2 33.987 153 95 4 372 520 54 204 5.19e-13 72.8
Msa1183900 AT2G41860.1 33.987 153 95 4 372 520 54 204 5.47e-13 72.8
Msa1183900 AT5G58380.1 30.282 142 96 2 378 519 18 156 6.23e-13 72.4
Msa1183900 AT5G35410.2 28.492 179 109 5 376 537 15 191 6.23e-13 71.6
Msa1183900 AT1G50700.3 33.333 153 96 4 372 520 73 223 7.24e-13 72.0
Msa1183900 AT4G35310.2 33.333 153 96 4 372 520 97 247 7.45e-13 72.4
Msa1183900 AT4G35310.1 33.333 153 96 4 372 520 97 247 7.45e-13 72.4
Msa1183900 AT2G35890.2 28.899 218 144 6 317 526 72 286 9.57e-13 72.0
Msa1183900 AT2G35890.1 28.899 218 144 6 317 526 72 286 9.57e-13 72.0
Msa1183900 AT1G50700.1 33.333 153 96 4 372 520 73 223 1.01e-12 72.0
Msa1183900 AT1G53165.1 26.630 184 121 4 369 552 15 184 1.05e-12 72.0
Msa1183900 AT1G63700.1 29.299 157 107 2 370 524 398 552 1.05e-12 72.4
Msa1183900 AT1G63700.2 29.299 157 107 2 370 524 398 552 1.05e-12 72.4
Msa1183900 AT1G53165.3 26.630 184 121 4 369 552 15 184 1.28e-12 72.0
Msa1183900 AT5G35410.1 28.492 179 109 5 376 537 15 191 1.33e-12 71.2
Msa1183900 AT1G53165.2 26.630 184 121 4 369 552 15 184 1.34e-12 72.0
Msa1183900 AT4G24100.1 28.571 182 119 3 372 553 33 203 1.47e-12 71.6
Msa1183900 AT1G50700.2 33.333 153 96 4 372 520 73 223 1.57e-12 71.2
Msa1183900 AT4G24100.4 28.571 182 119 3 372 553 49 219 1.91e-12 71.2
Msa1183900 AT4G24100.2 28.571 182 119 3 372 553 33 203 2.05e-12 71.2
Msa1183900 AT3G20410.2 31.765 170 107 5 355 520 77 241 2.17e-12 70.9
Msa1183900 AT3G20410.1 31.765 170 107 5 355 520 77 241 2.17e-12 70.9
Msa1183900 AT4G24100.3 28.571 182 119 3 372 553 49 219 2.52e-12 70.9
Msa1183900 AT2G17290.1 33.333 153 96 4 372 520 85 235 2.77e-12 70.5
Msa1183900 AT2G17290.2 33.333 153 96 4 372 520 85 235 2.77e-12 70.5
Msa1183900 AT2G38490.1 35.762 151 88 5 372 519 28 172 3.03e-12 70.1
Msa1183900 AT1G24650.1 31.937 191 112 9 340 518 513 697 3.29e-12 70.9
Msa1183900 AT5G19360.1 32.903 155 98 5 370 520 66 218 3.71e-12 70.1
Msa1183900 AT5G01820.1 31.757 148 98 1 372 519 22 166 5.96e-12 68.9
Msa1183900 AT4G10730.2 28.947 190 120 6 372 560 27 202 7.09e-12 69.3
Msa1183900 AT3G57530.2 32.903 155 98 4 370 520 61 213 7.52e-12 68.6
Msa1183900 AT4G10730.1 28.947 190 120 6 372 560 47 222 7.74e-12 69.3
Msa1183900 AT5G12180.1 32.680 153 97 5 372 520 73 223 8.80e-12 68.9
Msa1183900 AT3G57530.1 34.559 136 86 3 370 504 61 194 9.21e-12 68.9
Msa1183900 AT1G01140.2 28.743 167 112 3 353 519 5 164 1.12e-11 68.2
Msa1183900 AT1G01140.1 28.743 167 112 3 353 519 5 164 1.12e-11 68.2
Msa1183900 AT1G01140.3 28.743 167 112 3 353 519 5 164 1.14e-11 68.2
Msa1183900 AT2G31500.1 33.987 153 95 4 372 520 66 216 1.66e-11 68.2
Msa1183900 AT1G32320.1 32.192 146 89 3 375 519 51 187 1.87e-11 66.2
Msa1183900 AT1G73500.1 31.288 163 93 5 375 533 50 197 1.87e-11 66.6
Msa1183900 AT3G56760.1 30.729 192 117 6 370 554 122 304 2.62e-11 67.4
Msa1183900 AT1G50240.3 27.059 170 120 2 367 536 1 166 2.70e-11 68.2
Msa1183900 AT1G50240.3 33.981 103 62 2 603 705 161 257 4.99e-11 67.0
Msa1183900 AT1G50240.2 27.059 170 120 2 367 536 1 166 2.70e-11 68.2
Msa1183900 AT1G50240.2 33.981 103 62 2 603 705 161 257 4.99e-11 67.0
Msa1183900 AT4G14480.1 29.530 149 102 2 372 519 15 161 2.75e-11 67.0
Msa1183900 AT2G17890.1 30.921 152 101 2 372 519 108 259 2.81e-11 67.4
Msa1183900 AT5G23580.1 30.726 179 115 5 349 523 2 175 3.05e-11 67.0
Msa1183900 AT3G23000.1 29.747 158 96 3 369 519 22 171 3.10e-11 66.6
Msa1183900 AT1G69220.2 29.371 143 98 2 381 523 231 370 3.29e-11 67.4
Msa1183900 AT3G61960.2 34.884 129 81 3 377 505 15 140 3.38e-11 67.0
Msa1183900 AT5G18610.1 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1183900 AT5G18610.2 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1183900 AT5G18610.3 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1183900 AT3G61960.1 34.884 129 81 3 377 505 15 140 3.45e-11 67.0
Msa1183900 AT4G38230.2 32.680 153 97 4 372 520 54 204 3.68e-11 67.0
Msa1183900 AT5G66210.6 30.065 153 103 2 371 519 61 213 3.81e-11 66.6
Msa1183900 AT5G66210.4 30.065 153 103 2 371 519 61 213 3.81e-11 66.6
Msa1183900 AT5G66210.3 30.065 153 103 2 371 519 61 213 4.09e-11 66.6
Msa1183900 AT4G38230.4 32.680 153 97 4 372 520 24 174 5.49e-11 66.2
Msa1183900 AT4G38230.3 32.680 153 97 4 372 520 24 174 5.49e-11 66.2
Msa1183900 AT5G66210.1 30.065 153 103 2 371 519 61 213 5.63e-11 66.2
Msa1183900 AT5G66210.2 30.065 153 103 2 371 519 61 213 5.63e-11 66.2
Msa1183900 AT4G29810.1 30.508 177 116 4 360 534 58 229 5.69e-11 65.5
Msa1183900 AT5G66210.5 30.065 153 103 2 371 519 61 213 5.72e-11 66.2
Msa1183900 AT4G04710.2 27.619 210 133 7 350 552 17 214 7.02e-11 65.9
Msa1183900 AT4G29810.2 30.508 177 116 4 360 534 67 238 8.34e-11 65.1
Msa1183900 AT4G04710.1 27.619 210 133 7 350 552 17 214 8.77e-11 65.5
Msa1183900 AT4G04710.4 27.619 210 133 7 350 552 17 214 8.96e-11 65.5
Msa1183900 AT4G29810.3 31.214 173 112 4 364 534 71 238 8.98e-11 64.7

Find 236 sgRNAs with CRISPR-Local

Find 339 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCGAAACTTGCCGATTT+TGG 0.164587 8_1:+19400292 Msa1183900:CDS
TCCACTGGTCTTGGCACTTC+TGG 0.186142 8_1:-19403208 None:intergenic
TTGATTATCCATAAGTATTC+TGG 0.187578 8_1:-19403542 None:intergenic
CCTTCCCCTTTGATAATTTC+AGG 0.198008 8_1:-19402893 None:intergenic
CCGATTACGAGATGGAATTT+TGG 0.203762 8_1:+19401342 Msa1183900:CDS
ATTTCCTTTGTGAGGCTTAT+TGG 0.207003 8_1:-19401290 None:intergenic
TTCAATTTCAATGCTGCTGC+TGG 0.223944 8_1:+19399525 Msa1183900:five_prime_UTR
TTTATTGGTTCAAGATGATA+TGG 0.255030 8_1:+19400505 Msa1183900:CDS
AGATCTGTATCAACAGGTTC+TGG 0.263724 8_1:-19400710 None:intergenic
GGTCAGAGTCAGAGACTAAA+TGG 0.280365 8_1:+19400356 Msa1183900:CDS
CTTTCTTTGAAGGTGTAAAC+TGG 0.284251 8_1:+19403161 Msa1183900:CDS
ATGGAATTTAACTACAAAAT+AGG 0.291130 8_1:-19403464 None:intergenic
GTCTTATCCCAGAATACTTA+TGG 0.294061 8_1:+19403534 Msa1183900:three_prime_UTR
TCTTTGCCTCCTACACCTAA+TGG 0.296261 8_1:+19401013 Msa1183900:CDS
CAGATCCCTGCTGGCATAAC+TGG 0.320201 8_1:-19403062 None:intergenic
GACCGACCGTTTCTCTTGTT+TGG 0.324721 8_1:+19401582 Msa1183900:CDS
GTAGGCTCAGCAACAAGCTC+TGG 0.351703 8_1:-19402824 None:intergenic
GATCTCTCAATCCGTGTTAC+CGG 0.352022 8_1:+19400824 Msa1183900:CDS
CCAAAATTCCATCTCGTAAT+CGG 0.356631 8_1:-19401342 None:intergenic
AAGCAGCATCCTTTCTTTGA+AGG 0.363915 8_1:+19403151 Msa1183900:CDS
AATTGGACTTGGTTTCTTCC+CGG 0.368313 8_1:-19400843 None:intergenic
TTCTTGCATGAACTGTTATA+CGG 0.369620 8_1:+19402953 Msa1183900:CDS
TCAGCTTCTTTCTGCTTGCT+AGG 0.371087 8_1:-19401483 None:intergenic
ATAACTGGTCGCAGGTGATT+CGG 0.374379 8_1:-19403047 None:intergenic
GACCACCAGTTGATGCTGTC+GGG 0.375980 8_1:+19403269 Msa1183900:CDS
GACAAGTTTCTGATGTGATT+AGG 0.379723 8_1:+19403619 Msa1183900:three_prime_UTR
CTTTGCCTCCTACACCTAAT+GGG 0.380423 8_1:+19401014 Msa1183900:CDS
CCGTTTCTCTTGTTTGGTGA+TGG 0.381881 8_1:+19401588 Msa1183900:CDS
TTCATTGGTGGTGGCGGTGG+CGG 0.382553 8_1:-19403241 None:intergenic
TAACTGGTCGCAGGTGATTC+GGG 0.386536 8_1:-19403046 None:intergenic
TCTTGAGGGGAAAGAACAAT+TGG 0.387877 8_1:-19400860 None:intergenic
TGATATCCTAAGTTTAGATT+AGG 0.390070 8_1:+19403501 Msa1183900:three_prime_UTR
GCCTCAGTGATGACAGTAAC+TGG 0.392470 8_1:+19401248 Msa1183900:CDS
TATCATATTTCCAACTGAAA+TGG 0.393140 8_1:-19403483 None:intergenic
GGGAATAATGAAATGAAGTC+TGG 0.393724 8_1:+19403319 Msa1183900:CDS
GCAGTTGACTGGTGGACATT+TGG 0.399493 8_1:+19402926 Msa1183900:CDS
AAGAGCCGCAACATCGTCTT+GGG 0.401195 8_1:+19403104 Msa1183900:CDS
CTCATAAGATCTGTATCAAC+AGG 0.409221 8_1:-19400716 None:intergenic
GGAAACCCAGGTTCAGCTCT+TGG 0.411838 8_1:-19402788 None:intergenic
TTCAAGGAAAGGACCCTTCA+TGG 0.420297 8_1:-19400801 None:intergenic
GTATACAAAGTTGGAAGAAA+TGG 0.421797 8_1:-19401550 None:intergenic
GAGGTGACCTACACACTTTA+AGG 0.422441 8_1:+19401623 Msa1183900:CDS
ATTGGTGGTGGCGGTGGCGG+CGG 0.424607 8_1:-19403238 None:intergenic
TGATTATCCATAAGTATTCT+GGG 0.427265 8_1:-19403541 None:intergenic
CTTGAATATCTTCACATGCT+TGG 0.427624 8_1:+19402509 Msa1183900:CDS
ACCTTCATTGGTGGTGGCGG+TGG 0.430120 8_1:-19403244 None:intergenic
ACGTCTTTACTTGAAGTTGA+AGG 0.431342 8_1:+19400593 Msa1183900:CDS
GGTGAAACCTCAACCAAAAT+CGG 0.431802 8_1:-19400305 None:intergenic
ACTTTAAGGCAGCGGCAACC+TGG 0.433550 8_1:+19401637 Msa1183900:CDS
TGTGGACTGGCATTCCCATT+AGG 0.433623 8_1:-19401028 None:intergenic
GTGTAAACTGGGCATTGATT+AGG 0.434545 8_1:+19403173 Msa1183900:CDS
CAAGTTCTTAATTAAGCATC+CGG 0.444672 8_1:-19400777 None:intergenic
GGTGATCCGACTTTATTTGC+CGG 0.445751 8_1:+19400674 Msa1183900:CDS
CTTCAACAAGACTTTCTTGA+GGG 0.449259 8_1:-19400874 None:intergenic
TTGCTCCTGAAATTATCAAA+GGG 0.449378 8_1:+19402888 Msa1183900:CDS
AGTAACTGGAGCAACCTTAC+TGG 0.455347 8_1:+19401262 Msa1183900:CDS
AGTACTAGTAAGAGGATGTC+GGG 0.455362 8_1:+19403298 Msa1183900:CDS
ACTGGTGGTCCAACCTTCAT+TGG 0.456414 8_1:-19403256 None:intergenic
CTTACAGTTGCCGCCGTATG+TGG 0.456808 8_1:-19400326 None:intergenic
ACCAAAATCGGCAAGTTTCG+AGG 0.459495 8_1:-19400293 None:intergenic
CTGGGATCATTTCCTTTGTG+AGG 0.459717 8_1:-19401298 None:intergenic
GGAAAGCAGCGATTCGTTTG+AGG 0.460403 8_1:+19400649 Msa1183900:CDS
GATCTGTATCAACAGGTTCT+GGG 0.460711 8_1:-19400709 None:intergenic
TGACGGTGACCCTTCAAAAC+GGG 0.464150 8_1:+19402652 Msa1183900:CDS
CAGCTTCTTTCTGCTTGCTA+GGG 0.468174 8_1:-19401482 None:intergenic
CAATGAATGTGTGAGATTGC+TGG 0.468798 8_1:+19403719 Msa1183900:three_prime_UTR
TCAAAATGTGTATACAAAGT+TGG 0.468878 8_1:-19401559 None:intergenic
GGTTTCCCGACCCTTTGAAA+GGG 0.469448 8_1:-19402982 None:intergenic
CCAACCCCGACAGCATCAAC+TGG 0.474246 8_1:-19403274 None:intergenic
CTATCTCCTTTGAGCCTACT+CGG 0.476224 8_1:+19400555 Msa1183900:CDS
TACGGTAAAACCCCTTTCAA+AGG 0.476458 8_1:+19402971 Msa1183900:CDS
GACTTGGATGTGGTGACATT+GGG 0.478567 8_1:+19401392 Msa1183900:CDS
CCAGTTGATGCTGTCGGGGT+TGG 0.480914 8_1:+19403274 Msa1183900:CDS
CAGTTTACACCTTCAAAGAA+AGG 0.482696 8_1:-19403160 None:intergenic
CGGTTTCCCGACCCTTTGAA+AGG 0.484132 8_1:-19402983 None:intergenic
GGTTGAGGTTTCACCACATA+CGG 0.485799 8_1:+19400313 Msa1183900:CDS
TCAATTTCAATGCTGCTGCT+GGG 0.486016 8_1:+19399526 Msa1183900:five_prime_UTR
ATAGCACTAAGGGTAGTGTA+AGG 0.486304 8_1:+19401170 Msa1183900:CDS
TAAAGTGTGTAGGTCACCTC+CGG 0.487101 8_1:-19401620 None:intergenic
AATTAAGAACTTGCCCATGA+AGG 0.490933 8_1:+19400787 Msa1183900:CDS
ATCGAGGCCAAACGTGTCAT+AGG 0.491526 8_1:-19400449 None:intergenic
GGATGTGCCTATGACACGTT+TGG 0.494093 8_1:+19400442 Msa1183900:CDS
AAAACCCCTTTCAAAGGGTC+GGG 0.494609 8_1:+19402977 Msa1183900:CDS
GCTTATTGGCACTACCAGTA+AGG 0.495920 8_1:-19401276 None:intergenic
AACAAGCTCTGGAAGTCTGC+TGG 0.498281 8_1:-19402813 None:intergenic
AAAGAGCCGCAACATCGTCT+TGG 0.499673 8_1:+19403103 Msa1183900:CDS
GGGGAAAGAACAATTGGACT+TGG 0.500249 8_1:-19400854 None:intergenic
ATGACGGTGACCCTTCAAAA+CGG 0.500802 8_1:+19402651 Msa1183900:CDS
TAGTTAAATTCCATTTCAGT+TGG 0.502191 8_1:+19403473 Msa1183900:three_prime_UTR
CCAACCTTCATTGGTGGTGG+CGG 0.502378 8_1:-19403247 None:intergenic
ATCTATACTACTATGTGGAC+TGG 0.506600 8_1:-19401041 None:intergenic
ATTAAGAACTTGCCCATGAA+GGG 0.509867 8_1:+19400788 Msa1183900:CDS
GAAAGGATGCTGCTTGATCT+CGG 0.511805 8_1:-19403143 None:intergenic
CGACTTGGATGTGGTGACAT+TGG 0.512089 8_1:+19401391 Msa1183900:CDS
GACATAGATCGGGCAGCAGT+AGG 0.512246 8_1:-19402842 None:intergenic
TAAACTAAGCATGCCATCGC+TGG 0.514066 8_1:-19401134 None:intergenic
CTCACAAAGGAAATGATCCC+AGG 0.514314 8_1:+19401299 Msa1183900:CDS
CTGCGACCAGTTATGCCAGC+AGG 0.514380 8_1:+19403056 Msa1183900:CDS
GCCACCGCCACCACCAATGA+AGG 0.515875 8_1:+19403243 Msa1183900:CDS
CTTGCTCCTGAAATTATCAA+AGG 0.515966 8_1:+19402887 Msa1183900:CDS
GGTCAAAACAAATCTGAGTC+CGG 0.516128 8_1:+19400758 Msa1183900:CDS
TTTCAGGAGCAAGGTATTCG+TGG 0.516151 8_1:-19402877 None:intergenic
AGAATTGAATCAATTGTCGC+AGG 0.517107 8_1:+19400415 Msa1183900:CDS
GAATCAATTGTCGCAGGGAA+GGG 0.518040 8_1:+19400421 Msa1183900:CDS
TTTCTGATGTGATTAGGTAC+AGG 0.518524 8_1:+19403625 Msa1183900:three_prime_UTR
TAGAAACTTTGATAGCACTA+AGG 0.520159 8_1:+19401159 Msa1183900:CDS
GGTCCAACCTTCATTGGTGG+TGG 0.520213 8_1:-19403250 None:intergenic
GGACCACCAGTTGATGCTGT+CGG 0.520532 8_1:+19403268 Msa1183900:CDS
CTTTGATAATTTCAGGAGCA+AGG 0.522560 8_1:-19402886 None:intergenic
ACGGTAAAACCCCTTTCAAA+GGG 0.524392 8_1:+19402972 Msa1183900:CDS
GACGCTCGAGAACCTGCAAA+AGG 0.524432 8_1:-19400926 None:intergenic
TTTCCTTTCCATGTCCGAGT+AGG 0.524678 8_1:-19400569 None:intergenic
ATTCAACCTAATCTAAACTT+AGG 0.526493 8_1:-19403507 None:intergenic
TATTCAGAGAAATGTTTCCC+AGG 0.527556 8_1:-19401655 None:intergenic
AGTCATAGACTTTCAGAAGA+TGG 0.528897 8_1:-19403671 None:intergenic
TAAAACCCCTTTCAAAGGGT+CGG 0.529026 8_1:+19402976 Msa1183900:CDS
ATCTCTCAATCCGTGTTACC+GGG 0.530112 8_1:+19400825 Msa1183900:CDS
CTTTAAGGCAGCGGCAACCT+GGG 0.531322 8_1:+19401638 Msa1183900:CDS
TGAATCAATTGTCGCAGGGA+AGG 0.533409 8_1:+19400420 Msa1183900:CDS
CATAGTAGTATAGATAGTAT+TGG 0.534889 8_1:+19401049 Msa1183900:CDS
CCGCCACCACCAATGAAGGT+TGG 0.535518 8_1:+19403247 Msa1183900:CDS
ATTATCAAAGGGGAAGGTCA+TGG 0.538808 8_1:+19402899 Msa1183900:CDS
GTCAGAGTCAGAGACTAAAT+GGG 0.543984 8_1:+19400357 Msa1183900:CDS
TTTCGATTACTCAAACGACT+TGG 0.544521 8_1:+19401376 Msa1183900:CDS
GGAATAATGAAATGAAGTCT+GGG 0.545579 8_1:+19403320 Msa1183900:CDS
TGCTATGAAGGTTATGGACA+AGG 0.546101 8_1:+19401456 Msa1183900:CDS
TTGGTGATGGAATATTGTCC+CGG 0.547008 8_1:+19401601 Msa1183900:CDS
GAGTCAGAGACTAAATGGGC+AGG 0.548886 8_1:+19400361 Msa1183900:CDS
CCTTTGAGCCTACTCGGACA+TGG 0.551009 8_1:+19400561 Msa1183900:CDS
AGGAAGCCAAGAGCTGAACC+TGG 0.553932 8_1:+19402782 Msa1183900:CDS
ACTGGTCTTGGCACTTCTGG+TGG 0.554421 8_1:-19403205 None:intergenic
ACCGACGAAGGACATAGATC+GGG 0.557595 8_1:-19402852 None:intergenic
ATCTGTATCAACAGGTTCTG+GGG 0.557890 8_1:-19400708 None:intergenic
GAGCCTACTCGGACATGGAA+AGG 0.558030 8_1:+19400566 Msa1183900:CDS
TACCGACGAAGGACATAGAT+CGG 0.558089 8_1:-19402853 None:intergenic
GTCATGGAAGTGCAGTTGAC+TGG 0.558774 8_1:+19402915 Msa1183900:CDS
CCTTAAACCTGAAAATGTGT+TGG 0.562690 8_1:+19402547 Msa1183900:CDS
GGCTCAAAGGAGATAGACTC+AGG 0.562900 8_1:-19400548 None:intergenic
TTCAGGAGCAAGGTATTCGT+GGG 0.563447 8_1:-19402876 None:intergenic
CTGCTGGCATAACTGGTCGC+AGG 0.564301 8_1:-19403055 None:intergenic
CCATCACCAAACAAGAGAAA+CGG 0.565842 8_1:-19401588 None:intergenic
ACCTACACACTTTAAGGCAG+CGG 0.566025 8_1:+19401629 Msa1183900:CDS
GCCGCGGATCAGATCCCTGC+TGG 0.566460 8_1:-19403071 None:intergenic
CACGGATTGAGAGATCTTCA+AGG 0.568263 8_1:-19400817 None:intergenic
CAGTACTAGTAAGAGGATGT+CGG 0.571745 8_1:+19403297 Msa1183900:CDS
AGATAGTATTGGTGTTGTCA+AGG 0.574128 8_1:+19401060 Msa1183900:CDS
TCAAGGAAAGGACCCTTCAT+GGG 0.574375 8_1:-19400800 None:intergenic
TGATACAGATCTTATGAGAA+CGG 0.575155 8_1:+19400721 Msa1183900:CDS
TCTCGGAGCTGAGTGGAACT+CGG 0.575771 8_1:+19401425 Msa1183900:CDS
CATTGGGAGTGTATATCTCT+CGG 0.576510 8_1:+19401408 Msa1183900:CDS
TTTCCTCGGAATCTGGAGCA+AGG 0.576545 8_1:-19400970 None:intergenic
AGAAACTTTGATAGCACTAA+GGG 0.577344 8_1:+19401160 Msa1183900:CDS
GGTTGTATGCATACTGATGT+TGG 0.577407 8_1:-19402713 None:intergenic
TTGGTTTCTTCCCGGTAACA+CGG 0.578900 8_1:-19400835 None:intergenic
CTACGTTGAAAAGCGTAGCA+CGG 0.581312 8_1:-19403003 None:intergenic
GTTTCCCGACCCTTTGAAAG+GGG 0.581775 8_1:-19402981 None:intergenic
TTTCTTTGAAGGTGTAAACT+GGG 0.582156 8_1:+19403162 Msa1183900:CDS
GGGTTGGCAGTACTAGTAAG+AGG 0.582737 8_1:+19403290 Msa1183900:CDS
TTACTCAAACGACTTGGATG+TGG 0.585897 8_1:+19401382 Msa1183900:CDS
GACCCTTCAAAACGGGCTGG+TGG 0.586601 8_1:+19402659 Msa1183900:CDS
TGGCTCAGTTGTCGAATGCA+CGG 0.587108 8_1:+19400480 Msa1183900:CDS
GCATTCCCATTAGGTGTAGG+AGG 0.587144 8_1:-19401019 None:intergenic
GGTGACCCTTCAAAACGGGC+TGG 0.587637 8_1:+19402656 Msa1183900:CDS
AGTCTGCTGGAAGGAAACCC+AGG 0.588599 8_1:-19402800 None:intergenic
GATGTTGGCTCAATACAAGC+AGG 0.588948 8_1:-19402698 None:intergenic
AGACGAGGAATAAAACATGC+AGG 0.589247 8_1:-19402734 None:intergenic
CTGGCATTCCCATTAGGTGT+AGG 0.589407 8_1:-19401022 None:intergenic
CCATGTCCGAGTAGGCTCAA+AGG 0.589610 8_1:-19400561 None:intergenic
GGTGGTCCAACCTTCATTGG+TGG 0.590386 8_1:-19403253 None:intergenic
GAAGCTGACTAGAGCACAGA+CGG 0.590727 8_1:+19401498 Msa1183900:CDS
AGCACTAAGGGTAGTGTAAG+GGG 0.591563 8_1:+19401172 Msa1183900:CDS
TAGCACTAAGGGTAGTGTAA+GGG 0.595933 8_1:+19401171 Msa1183900:CDS
GCCCGATCTATGTCCTTCGT+CGG 0.596666 8_1:+19402851 Msa1183900:CDS
AAAGTGTGTAGGTCACCTCC+GGG 0.599022 8_1:-19401619 None:intergenic
GTATGATGTAGACACATTGA+AGG 0.599759 8_1:+19400628 Msa1183900:CDS
GAAGATATTCAAGAGCAAGC+AGG 0.600708 8_1:-19402499 None:intergenic
TGTGATATTTAGACATGGAG+AGG 0.601193 8_1:+19400249 Msa1183900:exon
ATACTATCTATACTACTATG+TGG 0.601696 8_1:-19401046 None:intergenic
ATTGAGAGATCTTCAAGGAA+AGG 0.602929 8_1:-19400812 None:intergenic
TAGGTAAAGCTGAACTAACA+TGG 0.603682 8_1:-19403445 None:intergenic
TTCAACAAGACTTTCTTGAG+GGG 0.604893 8_1:-19400873 None:intergenic
TCATAACCTCTAACAAGAGT+AGG 0.607050 8_1:-19402632 None:intergenic
AGCTCTGGAAGTCTGCTGGA+AGG 0.607447 8_1:-19402809 None:intergenic
CCTGAAATTATCAAAGGGGA+AGG 0.607684 8_1:+19402893 Msa1183900:CDS
AGGCAAAACAGTACATCTGA+GGG 0.613764 8_1:-19402612 None:intergenic
TAGGCAAAACAGTACATCTG+AGG 0.614710 8_1:-19402613 None:intergenic
GAATTGAATCAATTGTCGCA+GGG 0.615427 8_1:+19400416 Msa1183900:CDS
GCGGCAACTGTAAGAGAGGT+AGG 0.615733 8_1:+19400335 Msa1183900:CDS
GTTGAAGAACTGAATGACAC+GGG 0.624022 8_1:+19400890 Msa1183900:CDS
TGCGACCAGTTATGCCAGCA+GGG 0.625195 8_1:+19403057 Msa1183900:CDS
TCTTCAACAAGACTTTCTTG+AGG 0.627306 8_1:-19400875 None:intergenic
GTATATCTCTCGGAGCTGAG+TGG 0.628641 8_1:+19401418 Msa1183900:CDS
ACCAGAAGTGCCAAGACCAG+TGG 0.629425 8_1:+19403207 Msa1183900:CDS
GGCAAGGATAGCATTCCACC+TGG 0.629654 8_1:-19401317 None:intergenic
GTATTCGTGGGTACCGACGA+AGG 0.630369 8_1:-19402864 None:intergenic
CTGAGCCACTTCTCTGATCG+AGG 0.631057 8_1:-19400465 None:intergenic
TTTGGCCTCGATCAGAGAAG+TGG 0.631283 8_1:+19400460 Msa1183900:CDS
ACAAAGTTGGAAGAAATGGA+TGG 0.634189 8_1:-19401546 None:intergenic
TCTCCTTGCTCCAGATTCCG+AGG 0.636947 8_1:+19400967 Msa1183900:CDS
AATTCCATCTCGTAATCGGA+CGG 0.637708 8_1:-19401338 None:intergenic
AGCAGCGATTCGTTTGAGGA+CGG 0.638628 8_1:+19400653 Msa1183900:CDS
GGAAGCCAAGAGCTGAACCT+GGG 0.638723 8_1:+19402783 Msa1183900:CDS
CATCGTCTTGGGGTTAAGAG+AGG 0.639049 8_1:+19403115 Msa1183900:CDS
ATGGAAGTGCAGTTGACTGG+TGG 0.640074 8_1:+19402918 Msa1183900:CDS
GATTAGGTACAGGCAGCTGA+TGG 0.641997 8_1:+19403635 Msa1183900:three_prime_UTR
GCCAGCAGGGATCTGATCCG+CGG 0.644092 8_1:+19403070 Msa1183900:CDS
GGCCACTGCTATCACTTGCA+CGG 0.646241 8_1:-19401228 None:intergenic
AGTGATGCAATGACCAGCGA+TGG 0.649037 8_1:+19401121 Msa1183900:CDS
ACCCCGACAGCATCAACTGG+TGG 0.652680 8_1:-19403271 None:intergenic
TACGGCGGCAACTGTAAGAG+AGG 0.654423 8_1:+19400331 Msa1183900:CDS
ACCACCAGTTGATGCTGTCG+GGG 0.654905 8_1:+19403270 Msa1183900:CDS
CTAGCACCGGCAAATAAAGT+CGG 0.655368 8_1:-19400680 None:intergenic
TCGAGAACCTGCAAAAGGCG+AGG 0.656917 8_1:-19400921 None:intergenic
TCTGTATCAACAGGTTCTGG+GGG 0.657501 8_1:-19400707 None:intergenic
ACTCTTGTTAGAGGTTATGA+CGG 0.658841 8_1:+19402635 Msa1183900:CDS
TGTTGAAGAACTGAATGACA+CGG 0.658914 8_1:+19400889 Msa1183900:CDS
GAATAATGAAATGAAGTCTG+GGG 0.660609 8_1:+19403321 Msa1183900:CDS
AATGTGTTGGTTCGAGACGA+TGG 0.660909 8_1:+19402560 Msa1183900:CDS
TGCTCCTGAAATTATCAAAG+GGG 0.668510 8_1:+19402889 Msa1183900:CDS
TGTTATGTGATATTTAGACA+TGG 0.671093 8_1:+19400244 Msa1183900:exon
TTAACCCCAAGACGATGTTG+CGG 0.679035 8_1:-19403109 None:intergenic
GCTCTTTCACGAGTAAGCCG+CGG 0.679500 8_1:-19403087 None:intergenic
AGCCGTGCAAGTGATAGCAG+TGG 0.682214 8_1:+19401226 Msa1183900:CDS
AATAATGAAATGAAGTCTGG+GGG 0.682833 8_1:+19403322 Msa1183900:CDS
GCCGCTGCCTTAAAGTGTGT+AGG 0.687998 8_1:-19401630 None:intergenic
ACAAAGGAAATGATCCCAGG+TGG 0.691663 8_1:+19401302 Msa1183900:CDS
GCAAGGATAGCATTCCACCT+GGG 0.693466 8_1:-19401316 None:intergenic
CACCAAACAAGAGAAACGGT+CGG 0.703675 8_1:-19401584 None:intergenic
TGAGGTTTCACCACATACGG+CGG 0.703917 8_1:+19400316 Msa1183900:CDS
AGTGCCAATAAGCCTCACAA+AGG 0.712756 8_1:+19401286 Msa1183900:CDS
GTACTAGTAAGAGGATGTCG+GGG 0.718551 8_1:+19403299 Msa1183900:CDS
AGAGCCGCAACATCGTCTTG+GGG 0.734595 8_1:+19403105 Msa1183900:CDS
GTGATGGAATATTGTCCCGG+AGG 0.741667 8_1:+19401604 Msa1183900:CDS
TTGAAGAACTGAATGACACG+GGG 0.749290 8_1:+19400891 Msa1183900:CDS
TCCAGTTACTGTCATCACTG+AGG 0.753388 8_1:-19401249 None:intergenic
ATTTCTCTGAATATGCTGCG+CGG 0.772477 8_1:+19401665 Msa1183900:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAACAGAAACAAAAA+TGG - chr8_1:19399674-19399693 None:intergenic 15.0%
!!! TTTTTTTTTTCTTCTTAAGT+TGG + chr8_1:19399688-19399707 Msa1183900:intron 15.0%
!!! TTTCATGTTTTATTTTTTGT+TGG + chr8_1:19400067-19400086 Msa1183900:intron 15.0%
!!! ATGTATCTTTTGCAAAATTA+CGG - chr8_1:19399945-19399964 None:intergenic 20.0%
!!! TAACTTTTGAAAAATTACTG+TGG + chr8_1:19399964-19399983 Msa1183900:intron 20.0%
!!! ATATAGAAGAAGTATAAACA+TGG - chr8_1:19400122-19400141 None:intergenic 20.0%
!! ATGTATGTGAAAATAATTGA+TGG + chr8_1:19400152-19400171 Msa1183900:intron 20.0%
!! CTTATAATTTCAAAAGAAAG+AGG + chr8_1:19401981-19402000 Msa1183900:intron 20.0%
!! ATACAATAAAAAGTAGATCA+AGG - chr8_1:19403384-19403403 None:intergenic 20.0%
!! ATGGAATTTAACTACAAAAT+AGG - chr8_1:19403467-19403486 None:intergenic 20.0%
! AGGAAATGAAAGAAAGAAAA+TGG - chr8_1:19399587-19399606 None:intergenic 25.0%
! TATGTTTATCTATGCATGTT+TGG + chr8_1:19399894-19399913 Msa1183900:intron 25.0%
!!! TATTTTTTGTTGGATAGTTC+AGG + chr8_1:19400077-19400096 Msa1183900:intron 25.0%
!! ACATTTTTGTTCTATTTTGC+AGG + chr8_1:19400190-19400209 Msa1183900:intron 25.0%
! TGTTATGTGATATTTAGACA+TGG + chr8_1:19400244-19400263 Msa1183900:exon 25.0%
!!! TTTATTGGTTCAAGATGATA+TGG + chr8_1:19400505-19400524 Msa1183900:CDS 25.0%
! ATACTATCTATACTACTATG+TGG - chr8_1:19401049-19401068 None:intergenic 25.0%
! CATAGTAGTATAGATAGTAT+TGG + chr8_1:19401049-19401068 Msa1183900:CDS 25.0%
!!! TTATTTTGCTATGAAGGTTA+TGG + chr8_1:19401450-19401469 Msa1183900:CDS 25.0%
! TCAAAATGTGTATACAAAGT+TGG - chr8_1:19401562-19401581 None:intergenic 25.0%
! AAGTAACAAAGATCAGATAA+AGG - chr8_1:19401720-19401739 None:intergenic 25.0%
! TGCCATTCAATTATATTCAA+GGG - chr8_1:19402031-19402050 None:intergenic 25.0%
! TTGCCATTCAATTATATTCA+AGG - chr8_1:19402032-19402051 None:intergenic 25.0%
! ACAGTGTTATATTCAAACTA+TGG + chr8_1:19402250-19402269 Msa1183900:intron 25.0%
! TCAGTGTTATATTCAAACTA+TGG + chr8_1:19402301-19402320 Msa1183900:intron 25.0%
!!! GATTTTGAGTTCTTTTAGTT+TGG + chr8_1:19403355-19403374 Msa1183900:exon 25.0%
! TAGTTAAATTCCATTTCAGT+TGG + chr8_1:19403473-19403492 Msa1183900:three_prime_UTR 25.0%
! TATCATATTTCCAACTGAAA+TGG - chr8_1:19403486-19403505 None:intergenic 25.0%
! TGATATCCTAAGTTTAGATT+AGG + chr8_1:19403501-19403520 Msa1183900:three_prime_UTR 25.0%
! ATTCAACCTAATCTAAACTT+AGG - chr8_1:19403510-19403529 None:intergenic 25.0%
! TGATTATCCATAAGTATTCT+GGG - chr8_1:19403544-19403563 None:intergenic 25.0%
! TTGATTATCCATAAGTATTC+TGG - chr8_1:19403545-19403564 None:intergenic 25.0%
AAAGAAAGAAAATGGAGAGA+AGG - chr8_1:19399579-19399598 None:intergenic 30.0%
! AGACGAGATCTAAGATTAAA+AGG - chr8_1:19399607-19399626 None:intergenic 30.0%
ATTGAAACAACACAATGCAT+TGG - chr8_1:19399646-19399665 None:intergenic 30.0%
!! AATGCATTGTGTTGTTTCAA+TGG + chr8_1:19399645-19399664 Msa1183900:intron 30.0%
TGTTAATACCTTCTTAGTTG+AGG + chr8_1:19399722-19399741 Msa1183900:intron 30.0%
! TATCTTTTGCAAAATTACGG+TGG - chr8_1:19399942-19399961 None:intergenic 30.0%
TACCAAACATTTGCAAATCA+CGG + chr8_1:19399999-19400018 Msa1183900:intron 30.0%
TGATACAGATCTTATGAGAA+CGG + chr8_1:19400721-19400740 Msa1183900:CDS 30.0%
!!! TCAGATTTGTTTTGACCTAT+CGG - chr8_1:19400755-19400774 None:intergenic 30.0%
CAAGTTCTTAATTAAGCATC+CGG - chr8_1:19400780-19400799 None:intergenic 30.0%
! TAGAAACTTTGATAGCACTA+AGG + chr8_1:19401159-19401178 Msa1183900:CDS 30.0%
! AGAAACTTTGATAGCACTAA+GGG + chr8_1:19401160-19401179 Msa1183900:CDS 30.0%
GTATACAAAGTTGGAAGAAA+TGG - chr8_1:19401553-19401572 None:intergenic 30.0%
! TGCAAATCAGATTTTCATGA+GGG - chr8_1:19401749-19401768 None:intergenic 30.0%
! ATGCAAATCAGATTTTCATG+AGG - chr8_1:19401750-19401769 None:intergenic 30.0%
TCAAAAGAAAGAGGAAGTTA+TGG + chr8_1:19401990-19402009 Msa1183900:intron 30.0%
TCCCCTTGAATATAATTGAA+TGG + chr8_1:19402026-19402045 Msa1183900:intron 30.0%
GCCATTCAATTATATTCAAG+GGG - chr8_1:19402030-19402049 None:intergenic 30.0%
TATAATTGAATGGCAACACA+TGG + chr8_1:19402036-19402055 Msa1183900:intron 30.0%
!! CTCTTTGAAATTTGAAACAC+AGG + chr8_1:19402344-19402363 Msa1183900:intron 30.0%
!!! ATGATGTAGCTAGCATTTTT+TGG + chr8_1:19402397-19402416 Msa1183900:intron 30.0%
!!! CTTGATTTCTTGTTTTTCTG+AGG - chr8_1:19402764-19402783 None:intergenic 30.0%
CTCAGAAAAACAAGAAATCA+AGG + chr8_1:19402762-19402781 Msa1183900:CDS 30.0%
TTGCTCCTGAAATTATCAAA+GGG + chr8_1:19402888-19402907 Msa1183900:CDS 30.0%
TTCTTGCATGAACTGTTATA+CGG + chr8_1:19402953-19402972 Msa1183900:CDS 30.0%
! TTTCTTTGAAGGTGTAAACT+GGG + chr8_1:19403162-19403181 Msa1183900:CDS 30.0%
GGAATAATGAAATGAAGTCT+GGG + chr8_1:19403320-19403339 Msa1183900:CDS 30.0%
GAATAATGAAATGAAGTCTG+GGG + chr8_1:19403321-19403340 Msa1183900:CDS 30.0%
AATAATGAAATGAAGTCTGG+GGG + chr8_1:19403322-19403341 Msa1183900:CDS 30.0%
GAAAATGGAGAGAAGGAAAA+GGG - chr8_1:19399572-19399591 None:intergenic 35.0%
AGAAAATGGAGAGAAGGAAA+AGG - chr8_1:19399573-19399592 None:intergenic 35.0%
ACAAACAACCTCAACTAAGA+AGG - chr8_1:19399733-19399752 None:intergenic 35.0%
CAGGAATTCAAGACTTATCT+TGG + chr8_1:19400096-19400115 Msa1183900:intron 35.0%
TGTGATATTTAGACATGGAG+AGG + chr8_1:19400249-19400268 Msa1183900:exon 35.0%
AGAATTGAATCAATTGTCGC+AGG + chr8_1:19400415-19400434 Msa1183900:CDS 35.0%
GAATTGAATCAATTGTCGCA+GGG + chr8_1:19400416-19400435 Msa1183900:CDS 35.0%
ACGTCTTTACTTGAAGTTGA+AGG + chr8_1:19400593-19400612 Msa1183900:CDS 35.0%
GTATGATGTAGACACATTGA+AGG + chr8_1:19400628-19400647 Msa1183900:CDS 35.0%
CTCATAAGATCTGTATCAAC+AGG - chr8_1:19400719-19400738 None:intergenic 35.0%
AATTAAGAACTTGCCCATGA+AGG + chr8_1:19400787-19400806 Msa1183900:CDS 35.0%
ATTAAGAACTTGCCCATGAA+GGG + chr8_1:19400788-19400807 Msa1183900:CDS 35.0%
ATTGAGAGATCTTCAAGGAA+AGG - chr8_1:19400815-19400834 None:intergenic 35.0%
TTCAACAAGACTTTCTTGAG+GGG - chr8_1:19400876-19400895 None:intergenic 35.0%
CTTCAACAAGACTTTCTTGA+GGG - chr8_1:19400877-19400896 None:intergenic 35.0%
TCTTCAACAAGACTTTCTTG+AGG - chr8_1:19400878-19400897 None:intergenic 35.0%
TGTTGAAGAACTGAATGACA+CGG + chr8_1:19400889-19400908 Msa1183900:CDS 35.0%
! CCAAACACATTCTTTTTCCT+CGG - chr8_1:19400987-19401006 None:intergenic 35.0%
CGAGGAAAAAGAATGTGTTT+GGG + chr8_1:19400985-19401004 Msa1183900:CDS 35.0%
ATCTATACTACTATGTGGAC+TGG - chr8_1:19401044-19401063 None:intergenic 35.0%
!! AGATAGTATTGGTGTTGTCA+AGG + chr8_1:19401060-19401079 Msa1183900:CDS 35.0%
ATTTCCTTTGTGAGGCTTAT+TGG - chr8_1:19401293-19401312 None:intergenic 35.0%
CCAAAATTCCATCTCGTAAT+CGG - chr8_1:19401345-19401364 None:intergenic 35.0%
! CGATTACGAGATGGAATTTT+GGG + chr8_1:19401343-19401362 Msa1183900:CDS 35.0%
TTTCGATTACTCAAACGACT+TGG + chr8_1:19401376-19401395 Msa1183900:CDS 35.0%
!!! TCGGTGTTATTTTGCTATGA+AGG + chr8_1:19401444-19401463 Msa1183900:CDS 35.0%
ACAAAGTTGGAAGAAATGGA+TGG - chr8_1:19401549-19401568 None:intergenic 35.0%
TATTCAGAGAAATGTTTCCC+AGG - chr8_1:19401658-19401677 None:intergenic 35.0%
! CAAATCAGATTTTCATGAGG+GGG - chr8_1:19401747-19401766 None:intergenic 35.0%
! GCAAATCAGATTTTCATGAG+GGG - chr8_1:19401748-19401767 None:intergenic 35.0%
CTCGATAACGCTTTATGAAA+AGG - chr8_1:19401854-19401873 None:intergenic 35.0%
GATCCTTTATCTGTTACATC+TGG + chr8_1:19401940-19401959 Msa1183900:intron 35.0%
CTTCCAGATGTAACAGATAA+AGG - chr8_1:19401946-19401965 None:intergenic 35.0%
CTTTATCTGTTACATCTGGA+AGG + chr8_1:19401944-19401963 Msa1183900:intron 35.0%
! CAAATTTTATCCTCCTTCCT+TGG - chr8_1:19402068-19402087 None:intergenic 35.0%
TAGTATTGCACAACCTTCAT+TGG - chr8_1:19402137-19402156 None:intergenic 35.0%
! TAGCAGAAAACTTTTCCTTC+AGG - chr8_1:19402166-19402185 None:intergenic 35.0%
AGAAAATGCCATTACTTTCC+AGG - chr8_1:19402224-19402243 None:intergenic 35.0%
CTTGAATATCTTCACATGCT+TGG + chr8_1:19402509-19402528 Msa1183900:CDS 35.0%
!!! CCAACACATTTTCAGGTTTA+AGG - chr8_1:19402550-19402569 None:intergenic 35.0%
CCTTAAACCTGAAAATGTGT+TGG + chr8_1:19402547-19402566 Msa1183900:CDS 35.0%
TCATAACCTCTAACAAGAGT+AGG - chr8_1:19402635-19402654 None:intergenic 35.0%
ACTCTTGTTAGAGGTTATGA+CGG + chr8_1:19402635-19402654 Msa1183900:CDS 35.0%
! CTTTGATAATTTCAGGAGCA+AGG - chr8_1:19402889-19402908 None:intergenic 35.0%
CTTGCTCCTGAAATTATCAA+AGG + chr8_1:19402887-19402906 Msa1183900:CDS 35.0%
TGCTCCTGAAATTATCAAAG+GGG + chr8_1:19402889-19402908 Msa1183900:CDS 35.0%
CAGTTTACACCTTCAAAGAA+AGG - chr8_1:19403163-19403182 None:intergenic 35.0%
! CTTTCTTTGAAGGTGTAAAC+TGG + chr8_1:19403161-19403180 Msa1183900:CDS 35.0%
GGGAATAATGAAATGAAGTC+TGG + chr8_1:19403319-19403338 Msa1183900:CDS 35.0%
GCTGCAAAAATAACTGATCA+TGG - chr8_1:19403410-19403429 None:intergenic 35.0%
TAGGTAAAGCTGAACTAACA+TGG - chr8_1:19403448-19403467 None:intergenic 35.0%
GTCTTATCCCAGAATACTTA+TGG + chr8_1:19403534-19403553 Msa1183900:three_prime_UTR 35.0%
GACAAGTTTCTGATGTGATT+AGG + chr8_1:19403619-19403638 Msa1183900:three_prime_UTR 35.0%
TTTCTGATGTGATTAGGTAC+AGG + chr8_1:19403625-19403644 Msa1183900:three_prime_UTR 35.0%
AGTCATAGACTTTCAGAAGA+TGG - chr8_1:19403674-19403693 None:intergenic 35.0%
TTCAATTTCAATGCTGCTGC+TGG + chr8_1:19399525-19399544 Msa1183900:five_prime_UTR 40.0%
TCAATTTCAATGCTGCTGCT+GGG + chr8_1:19399526-19399545 Msa1183900:five_prime_UTR 40.0%
! CACCGTGATTTGCAAATGTT+TGG - chr8_1:19400004-19400023 None:intergenic 40.0%
CAAACATTTGCAAATCACGG+TGG + chr8_1:19400002-19400021 Msa1183900:intron 40.0%
!!! AAACTTGCCGATTTTGGTTG+AGG + chr8_1:19400298-19400317 Msa1183900:CDS 40.0%
GGTGAAACCTCAACCAAAAT+CGG - chr8_1:19400308-19400327 None:intergenic 40.0%
GTCAGAGTCAGAGACTAAAT+GGG + chr8_1:19400357-19400376 Msa1183900:CDS 40.0%
! AGGAGTTTTCAAATGCTAGG+TGG + chr8_1:19400381-19400400 Msa1183900:CDS 40.0%
! GTCGAATGCACGGATTTTAT+TGG + chr8_1:19400490-19400509 Msa1183900:CDS 40.0%
ATCTGTATCAACAGGTTCTG+GGG - chr8_1:19400711-19400730 None:intergenic 40.0%
GATCTGTATCAACAGGTTCT+GGG - chr8_1:19400712-19400731 None:intergenic 40.0%
AGATCTGTATCAACAGGTTC+TGG - chr8_1:19400713-19400732 None:intergenic 40.0%
! AGAACGGTTTATGTACCGAT+AGG + chr8_1:19400737-19400756 Msa1183900:CDS 40.0%
GGTCAAAACAAATCTGAGTC+CGG + chr8_1:19400758-19400777 Msa1183900:CDS 40.0%
! AATTGGACTTGGTTTCTTCC+CGG - chr8_1:19400846-19400865 None:intergenic 40.0%
TCTTGAGGGGAAAGAACAAT+TGG - chr8_1:19400863-19400882 None:intergenic 40.0%
GTTGAAGAACTGAATGACAC+GGG + chr8_1:19400890-19400909 Msa1183900:CDS 40.0%
TTGAAGAACTGAATGACACG+GGG + chr8_1:19400891-19400910 Msa1183900:CDS 40.0%
! CATTCTTTTTCCTCGGAATC+TGG - chr8_1:19400980-19400999 None:intergenic 40.0%
CCGAGGAAAAAGAATGTGTT+TGG + chr8_1:19400984-19401003 Msa1183900:CDS 40.0%
ATAGCACTAAGGGTAGTGTA+AGG + chr8_1:19401170-19401189 Msa1183900:CDS 40.0%
TAGCACTAAGGGTAGTGTAA+GGG + chr8_1:19401171-19401190 Msa1183900:CDS 40.0%
AATTCCATCTCGTAATCGGA+CGG - chr8_1:19401341-19401360 None:intergenic 40.0%
! CCGATTACGAGATGGAATTT+TGG + chr8_1:19401342-19401361 Msa1183900:CDS 40.0%
! TTACTCAAACGACTTGGATG+TGG + chr8_1:19401382-19401401 Msa1183900:CDS 40.0%
! CATTGGGAGTGTATATCTCT+CGG + chr8_1:19401408-19401427 Msa1183900:CDS 40.0%
TGCTATGAAGGTTATGGACA+AGG + chr8_1:19401456-19401475 Msa1183900:CDS 40.0%
CCATCACCAAACAAGAGAAA+CGG - chr8_1:19401591-19401610 None:intergenic 40.0%
!! TTGGTGATGGAATATTGTCC+CGG + chr8_1:19401601-19401620 Msa1183900:CDS 40.0%
ATTTCTCTGAATATGCTGCG+CGG + chr8_1:19401665-19401684 Msa1183900:CDS 40.0%
! TGTTACATCTGGAAGGCTTT+TGG + chr8_1:19401951-19401970 Msa1183900:intron 40.0%
! GTTACATCTGGAAGGCTTTT+GGG + chr8_1:19401952-19401971 Msa1183900:intron 40.0%
ATTGAATGGCAACACATGGT+TGG + chr8_1:19402040-19402059 Msa1183900:intron 40.0%
ATTGCACAACCTTCATTGGA+GGG - chr8_1:19402133-19402152 None:intergenic 40.0%
TATTGCACAACCTTCATTGG+AGG - chr8_1:19402134-19402153 None:intergenic 40.0%
GCAATACTATTTGCTCCTGA+AGG + chr8_1:19402148-19402167 Msa1183900:intron 40.0%
AGAAACGTTATATCCTGTCC+AGG + chr8_1:19402194-19402213 Msa1183900:intron 40.0%
GAAGATATTCAAGAGCAAGC+AGG - chr8_1:19402502-19402521 None:intergenic 40.0%
! TCTCGAACCAACACATTTTC+AGG - chr8_1:19402557-19402576 None:intergenic 40.0%
AGGCAAAACAGTACATCTGA+GGG - chr8_1:19402615-19402634 None:intergenic 40.0%
TAGGCAAAACAGTACATCTG+AGG - chr8_1:19402616-19402635 None:intergenic 40.0%
! GTTTTGCCTACTCTTGTTAG+AGG + chr8_1:19402626-19402645 Msa1183900:CDS 40.0%
GGTTGTATGCATACTGATGT+TGG - chr8_1:19402716-19402735 None:intergenic 40.0%
AGACGAGGAATAAAACATGC+AGG - chr8_1:19402737-19402756 None:intergenic 40.0%
!! TTTTTCTGAGGAAAGAGACG+AGG - chr8_1:19402752-19402771 None:intergenic 40.0%
! CCTTCCCCTTTGATAATTTC+AGG - chr8_1:19402896-19402915 None:intergenic 40.0%
CCTGAAATTATCAAAGGGGA+AGG + chr8_1:19402893-19402912 Msa1183900:CDS 40.0%
ATTATCAAAGGGGAAGGTCA+TGG + chr8_1:19402899-19402918 Msa1183900:CDS 40.0%
TACGGTAAAACCCCTTTCAA+AGG + chr8_1:19402971-19402990 Msa1183900:CDS 40.0%
ACGGTAAAACCCCTTTCAAA+GGG + chr8_1:19402972-19402991 Msa1183900:CDS 40.0%
TAAAACCCCTTTCAAAGGGT+CGG + chr8_1:19402976-19402995 Msa1183900:CDS 40.0%
AAGCAGCATCCTTTCTTTGA+AGG + chr8_1:19403151-19403170 Msa1183900:CDS 40.0%
!! GTGTAAACTGGGCATTGATT+AGG + chr8_1:19403173-19403192 Msa1183900:CDS 40.0%
CAGTACTAGTAAGAGGATGT+CGG + chr8_1:19403297-19403316 Msa1183900:CDS 40.0%
AGTACTAGTAAGAGGATGTC+GGG + chr8_1:19403298-19403317 Msa1183900:CDS 40.0%
ATGCATGTTTGGTATCACCG+TGG + chr8_1:19399905-19399924 Msa1183900:intron 45.0%
TGCATGTTTGGTATCACCGT+GGG + chr8_1:19399906-19399925 Msa1183900:intron 45.0%
!!! TCCTCGAAACTTGCCGATTT+TGG + chr8_1:19400292-19400311 Msa1183900:CDS 45.0%
ACCAAAATCGGCAAGTTTCG+AGG - chr8_1:19400296-19400315 None:intergenic 45.0%
GGTTGAGGTTTCACCACATA+CGG + chr8_1:19400313-19400332 Msa1183900:CDS 45.0%
GGTCAGAGTCAGAGACTAAA+TGG + chr8_1:19400356-19400375 Msa1183900:CDS 45.0%
! GGCAGGAGTTTTCAAATGCT+AGG + chr8_1:19400378-19400397 Msa1183900:CDS 45.0%
TGAATCAATTGTCGCAGGGA+AGG + chr8_1:19400420-19400439 Msa1183900:CDS 45.0%
GAATCAATTGTCGCAGGGAA+GGG + chr8_1:19400421-19400440 Msa1183900:CDS 45.0%
CTATCTCCTTTGAGCCTACT+CGG + chr8_1:19400555-19400574 Msa1183900:CDS 45.0%
TTTCCTTTCCATGTCCGAGT+AGG - chr8_1:19400572-19400591 None:intergenic 45.0%
! GGTGATCCGACTTTATTTGC+CGG + chr8_1:19400674-19400693 Msa1183900:CDS 45.0%
!! CTAGCACCGGCAAATAAAGT+CGG - chr8_1:19400683-19400702 None:intergenic 45.0%
! TCTGTATCAACAGGTTCTGG+GGG - chr8_1:19400710-19400729 None:intergenic 45.0%
TCAAGGAAAGGACCCTTCAT+GGG - chr8_1:19400803-19400822 None:intergenic 45.0%
TTCAAGGAAAGGACCCTTCA+TGG - chr8_1:19400804-19400823 None:intergenic 45.0%
! CACGGATTGAGAGATCTTCA+AGG - chr8_1:19400820-19400839 None:intergenic 45.0%
GATCTCTCAATCCGTGTTAC+CGG + chr8_1:19400824-19400843 Msa1183900:CDS 45.0%
ATCTCTCAATCCGTGTTACC+GGG + chr8_1:19400825-19400844 Msa1183900:CDS 45.0%
TTGGTTTCTTCCCGGTAACA+CGG - chr8_1:19400838-19400857 None:intergenic 45.0%
GGGGAAAGAACAATTGGACT+TGG - chr8_1:19400857-19400876 None:intergenic 45.0%
! AACATATCCTCGCCTTTTGC+AGG + chr8_1:19400914-19400933 Msa1183900:CDS 45.0%
TCTTTGCCTCCTACACCTAA+TGG + chr8_1:19401013-19401032 Msa1183900:CDS 45.0%
CTTTGCCTCCTACACCTAAT+GGG + chr8_1:19401014-19401033 Msa1183900:CDS 45.0%
TAAACTAAGCATGCCATCGC+TGG - chr8_1:19401137-19401156 None:intergenic 45.0%
AGCACTAAGGGTAGTGTAAG+GGG + chr8_1:19401172-19401191 Msa1183900:CDS 45.0%
TCCAGTTACTGTCATCACTG+AGG - chr8_1:19401252-19401271 None:intergenic 45.0%
AGTAACTGGAGCAACCTTAC+TGG + chr8_1:19401262-19401281 Msa1183900:CDS 45.0%
GCTTATTGGCACTACCAGTA+AGG - chr8_1:19401279-19401298 None:intergenic 45.0%
AGTGCCAATAAGCCTCACAA+AGG + chr8_1:19401286-19401305 Msa1183900:CDS 45.0%
CTGGGATCATTTCCTTTGTG+AGG - chr8_1:19401301-19401320 None:intergenic 45.0%
CTCACAAAGGAAATGATCCC+AGG + chr8_1:19401299-19401318 Msa1183900:CDS 45.0%
ACAAAGGAAATGATCCCAGG+TGG + chr8_1:19401302-19401321 Msa1183900:CDS 45.0%
GACTTGGATGTGGTGACATT+GGG + chr8_1:19401392-19401411 Msa1183900:CDS 45.0%
! CAGCTTCTTTCTGCTTGCTA+GGG - chr8_1:19401485-19401504 None:intergenic 45.0%
TCAGCTTCTTTCTGCTTGCT+AGG - chr8_1:19401486-19401505 None:intergenic 45.0%
CACCAAACAAGAGAAACGGT+CGG - chr8_1:19401587-19401606 None:intergenic 45.0%
! CCGTTTCTCTTGTTTGGTGA+TGG + chr8_1:19401588-19401607 Msa1183900:CDS 45.0%
TAAAGTGTGTAGGTCACCTC+CGG - chr8_1:19401623-19401642 None:intergenic 45.0%
GAGGTGACCTACACACTTTA+AGG + chr8_1:19401623-19401642 Msa1183900:CDS 45.0%
!! ACCTACACACTTTAAGGCAG+CGG + chr8_1:19401629-19401648 Msa1183900:CDS 45.0%
TCATTGGAGGGAACAAGGAT+CGG - chr8_1:19402121-19402140 None:intergenic 45.0%
ATCCTTGTTCCCTCCAATGA+AGG + chr8_1:19402121-19402140 Msa1183900:intron 45.0%
AACCTTCATTGGAGGGAACA+AGG - chr8_1:19402126-19402145 None:intergenic 45.0%
CATTACTTTCCAGGAAAGCC+TGG - chr8_1:19402215-19402234 None:intergenic 45.0%
CAGGCTTTCCTGGAAAGTAA+TGG + chr8_1:19402213-19402232 Msa1183900:intron 45.0%
!! AATGTGTTGGTTCGAGACGA+TGG + chr8_1:19402560-19402579 Msa1183900:CDS 45.0%
ATGACGGTGACCCTTCAAAA+CGG + chr8_1:19402651-19402670 Msa1183900:CDS 45.0%
!! GATGTTGGCTCAATACAAGC+AGG - chr8_1:19402701-19402720 None:intergenic 45.0%
TACCGACGAAGGACATAGAT+CGG - chr8_1:19402856-19402875 None:intergenic 45.0%
! TTCAGGAGCAAGGTATTCGT+GGG - chr8_1:19402879-19402898 None:intergenic 45.0%
! TTTCAGGAGCAAGGTATTCG+TGG - chr8_1:19402880-19402899 None:intergenic 45.0%
AAAACCCCTTTCAAAGGGTC+GGG + chr8_1:19402977-19402996 Msa1183900:CDS 45.0%
! CTACGTTGAAAAGCGTAGCA+CGG - chr8_1:19403006-19403025 None:intergenic 45.0%
! GCTACGCTTTTCAACGTAGT+AGG + chr8_1:19403007-19403026 Msa1183900:CDS 45.0%
ATAACTGGTCGCAGGTGATT+CGG - chr8_1:19403050-19403069 None:intergenic 45.0%
TTAACCCCAAGACGATGTTG+CGG - chr8_1:19403112-19403131 None:intergenic 45.0%
! GAAAGGATGCTGCTTGATCT+CGG - chr8_1:19403146-19403165 None:intergenic 45.0%
GTACTAGTAAGAGGATGTCG+GGG + chr8_1:19403299-19403318 Msa1183900:CDS 45.0%
GAAGTCTGGGGGTAAATATC+TGG + chr8_1:19403333-19403352 Msa1183900:CDS 45.0%
!!! AAATTATTAATCTTAATTTT+TGG + chr8_1:19403597-19403616 Msa1183900:three_prime_UTR 5.0%
TGAGGTTTCACCACATACGG+CGG + chr8_1:19400316-19400335 Msa1183900:CDS 50.0%
GAGTCAGAGACTAAATGGGC+AGG + chr8_1:19400361-19400380 Msa1183900:CDS 50.0%
GGATGTGCCTATGACACGTT+TGG + chr8_1:19400442-19400461 Msa1183900:CDS 50.0%
ATCGAGGCCAAACGTGTCAT+AGG - chr8_1:19400452-19400471 None:intergenic 50.0%
TTTGGCCTCGATCAGAGAAG+TGG + chr8_1:19400460-19400479 Msa1183900:CDS 50.0%
TGGCTCAGTTGTCGAATGCA+CGG + chr8_1:19400480-19400499 Msa1183900:CDS 50.0%
GGCTCAAAGGAGATAGACTC+AGG - chr8_1:19400551-19400570 None:intergenic 50.0%
GGAAAGCAGCGATTCGTTTG+AGG + chr8_1:19400649-19400668 Msa1183900:CDS 50.0%
AGCAGCGATTCGTTTGAGGA+CGG + chr8_1:19400653-19400672 Msa1183900:CDS 50.0%
! TTTCCTCGGAATCTGGAGCA+AGG - chr8_1:19400973-19400992 None:intergenic 50.0%
GCATTCCCATTAGGTGTAGG+AGG - chr8_1:19401022-19401041 None:intergenic 50.0%
CTGGCATTCCCATTAGGTGT+AGG - chr8_1:19401025-19401044 None:intergenic 50.0%
!! TGTGGACTGGCATTCCCATT+AGG - chr8_1:19401031-19401050 None:intergenic 50.0%
AGTGATGCAATGACCAGCGA+TGG + chr8_1:19401121-19401140 Msa1183900:CDS 50.0%
GCCTCAGTGATGACAGTAAC+TGG + chr8_1:19401248-19401267 Msa1183900:CDS 50.0%
GCAAGGATAGCATTCCACCT+GGG - chr8_1:19401319-19401338 None:intergenic 50.0%
! CGACTTGGATGTGGTGACAT+TGG + chr8_1:19401391-19401410 Msa1183900:CDS 50.0%
GTATATCTCTCGGAGCTGAG+TGG + chr8_1:19401418-19401437 Msa1183900:CDS 50.0%
GAAGCTGACTAGAGCACAGA+CGG + chr8_1:19401498-19401517 Msa1183900:CDS 50.0%
GACCGACCGTTTCTCTTGTT+TGG + chr8_1:19401582-19401601 Msa1183900:CDS 50.0%
! GTGATGGAATATTGTCCCGG+AGG + chr8_1:19401604-19401623 Msa1183900:CDS 50.0%
AAAGTGTGTAGGTCACCTCC+GGG - chr8_1:19401622-19401641 None:intergenic 50.0%
! GCAACACATGGTTGGTACCA+AGG + chr8_1:19402048-19402067 Msa1183900:intron 50.0%
! CACATGGTTGGTACCAAGGA+AGG + chr8_1:19402052-19402071 Msa1183900:intron 50.0%
! ATGGTTGGTACCAAGGAAGG+AGG + chr8_1:19402055-19402074 Msa1183900:intron 50.0%
ATTGGAGGGAACAAGGATCG+GGG - chr8_1:19402119-19402138 None:intergenic 50.0%
CATTGGAGGGAACAAGGATC+GGG - chr8_1:19402120-19402139 None:intergenic 50.0%
ATATCCTGTCCAGGCTTTCC+TGG + chr8_1:19402203-19402222 Msa1183900:intron 50.0%
TGACGGTGACCCTTCAAAAC+GGG + chr8_1:19402652-19402671 Msa1183900:CDS 50.0%
!! AACAAGCTCTGGAAGTCTGC+TGG - chr8_1:19402816-19402835 None:intergenic 50.0%
ACCGACGAAGGACATAGATC+GGG - chr8_1:19402855-19402874 None:intergenic 50.0%
! GTCATGGAAGTGCAGTTGAC+TGG + chr8_1:19402915-19402934 Msa1183900:CDS 50.0%
! ATGGAAGTGCAGTTGACTGG+TGG + chr8_1:19402918-19402937 Msa1183900:CDS 50.0%
! GCAGTTGACTGGTGGACATT+TGG + chr8_1:19402926-19402945 Msa1183900:CDS 50.0%
! GTTTCCCGACCCTTTGAAAG+GGG - chr8_1:19402984-19403003 None:intergenic 50.0%
! GGTTTCCCGACCCTTTGAAA+GGG - chr8_1:19402985-19403004 None:intergenic 50.0%
TAACTGGTCGCAGGTGATTC+GGG - chr8_1:19403049-19403068 None:intergenic 50.0%
AAAGAGCCGCAACATCGTCT+TGG + chr8_1:19403103-19403122 Msa1183900:CDS 50.0%
AAGAGCCGCAACATCGTCTT+GGG + chr8_1:19403104-19403123 Msa1183900:CDS 50.0%
CATCGTCTTGGGGTTAAGAG+AGG + chr8_1:19403115-19403134 Msa1183900:CDS 50.0%
!! GGCTCATTTTCCACTGGTCT+TGG - chr8_1:19403220-19403239 None:intergenic 50.0%
ACTGGTGGTCCAACCTTCAT+TGG - chr8_1:19403259-19403278 None:intergenic 50.0%
! GGGTTGGCAGTACTAGTAAG+AGG + chr8_1:19403290-19403309 Msa1183900:CDS 50.0%
GATTAGGTACAGGCAGCTGA+TGG + chr8_1:19403635-19403654 Msa1183900:three_prime_UTR 50.0%
CTTACAGTTGCCGCCGTATG+TGG - chr8_1:19400329-19400348 None:intergenic 55.0%
TACGGCGGCAACTGTAAGAG+AGG + chr8_1:19400331-19400350 Msa1183900:CDS 55.0%
GCGGCAACTGTAAGAGAGGT+AGG + chr8_1:19400335-19400354 Msa1183900:CDS 55.0%
CTGAGCCACTTCTCTGATCG+AGG - chr8_1:19400468-19400487 None:intergenic 55.0%
CCATGTCCGAGTAGGCTCAA+AGG - chr8_1:19400564-19400583 None:intergenic 55.0%
CCTTTGAGCCTACTCGGACA+TGG + chr8_1:19400561-19400580 Msa1183900:CDS 55.0%
GAGCCTACTCGGACATGGAA+AGG + chr8_1:19400566-19400585 Msa1183900:CDS 55.0%
! TTCTGGGGGATGACTAGCAC+CGG - chr8_1:19400696-19400715 None:intergenic 55.0%
TCGAGAACCTGCAAAAGGCG+AGG - chr8_1:19400924-19400943 None:intergenic 55.0%
GACGCTCGAGAACCTGCAAA+AGG - chr8_1:19400929-19400948 None:intergenic 55.0%
TCTCCTTGCTCCAGATTCCG+AGG + chr8_1:19400967-19400986 Msa1183900:CDS 55.0%
AGCCGTGCAAGTGATAGCAG+TGG + chr8_1:19401226-19401245 Msa1183900:CDS 55.0%
GGCCACTGCTATCACTTGCA+CGG - chr8_1:19401231-19401250 None:intergenic 55.0%
GGCAAGGATAGCATTCCACC+TGG - chr8_1:19401320-19401339 None:intergenic 55.0%
CATCTCGTAATCGGACGGCA+AGG - chr8_1:19401336-19401355 None:intergenic 55.0%
CTTGCCGTCCGATTACGAGA+TGG + chr8_1:19401334-19401353 Msa1183900:CDS 55.0%
TCTCGGAGCTGAGTGGAACT+CGG + chr8_1:19401425-19401444 Msa1183900:CDS 55.0%
GCCGCTGCCTTAAAGTGTGT+AGG - chr8_1:19401633-19401652 None:intergenic 55.0%
!! ACTTTAAGGCAGCGGCAACC+TGG + chr8_1:19401637-19401656 Msa1183900:CDS 55.0%
!! CTTTAAGGCAGCGGCAACCT+GGG + chr8_1:19401638-19401657 Msa1183900:CDS 55.0%
TTGGAGGGAACAAGGATCGG+GGG - chr8_1:19402118-19402137 None:intergenic 55.0%
CTTTCCAGGAAAGCCTGGAC+AGG - chr8_1:19402210-19402229 None:intergenic 55.0%
!! CACCACCAGCCCGTTTTGAA+GGG - chr8_1:19402664-19402683 None:intergenic 55.0%
AGGAAGCCAAGAGCTGAACC+TGG + chr8_1:19402782-19402801 Msa1183900:CDS 55.0%
GGAAGCCAAGAGCTGAACCT+GGG + chr8_1:19402783-19402802 Msa1183900:CDS 55.0%
GGAAACCCAGGTTCAGCTCT+TGG - chr8_1:19402791-19402810 None:intergenic 55.0%
AGTCTGCTGGAAGGAAACCC+AGG - chr8_1:19402803-19402822 None:intergenic 55.0%
!! AGCTCTGGAAGTCTGCTGGA+AGG - chr8_1:19402812-19402831 None:intergenic 55.0%
GTAGGCTCAGCAACAAGCTC+TGG - chr8_1:19402827-19402846 None:intergenic 55.0%
GACATAGATCGGGCAGCAGT+AGG - chr8_1:19402845-19402864 None:intergenic 55.0%
GCCCGATCTATGTCCTTCGT+CGG + chr8_1:19402851-19402870 Msa1183900:CDS 55.0%
!! GTATTCGTGGGTACCGACGA+AGG - chr8_1:19402867-19402886 None:intergenic 55.0%
CGGTTTCCCGACCCTTTGAA+AGG - chr8_1:19402986-19403005 None:intergenic 55.0%
TGCGACCAGTTATGCCAGCA+GGG + chr8_1:19403057-19403076 Msa1183900:CDS 55.0%
CAGATCCCTGCTGGCATAAC+TGG - chr8_1:19403065-19403084 None:intergenic 55.0%
GCTCTTTCACGAGTAAGCCG+CGG - chr8_1:19403090-19403109 None:intergenic 55.0%
AGAGCCGCAACATCGTCTTG+GGG + chr8_1:19403105-19403124 Msa1183900:CDS 55.0%
!! ACTGGTCTTGGCACTTCTGG+TGG - chr8_1:19403208-19403227 None:intergenic 55.0%
!! ACCAGAAGTGCCAAGACCAG+TGG + chr8_1:19403207-19403226 Msa1183900:CDS 55.0%
!! TCCACTGGTCTTGGCACTTC+TGG - chr8_1:19403211-19403230 None:intergenic 55.0%
!! CCAACCTTCATTGGTGGTGG+CGG - chr8_1:19403250-19403269 None:intergenic 55.0%
GGTCCAACCTTCATTGGTGG+TGG - chr8_1:19403253-19403272 None:intergenic 55.0%
GGTGGTCCAACCTTCATTGG+TGG - chr8_1:19403256-19403275 None:intergenic 55.0%
! GGACCACCAGTTGATGCTGT+CGG + chr8_1:19403268-19403287 Msa1183900:CDS 55.0%
! GACCACCAGTTGATGCTGTC+GGG + chr8_1:19403269-19403288 Msa1183900:CDS 55.0%
! ACCACCAGTTGATGCTGTCG+GGG + chr8_1:19403270-19403289 Msa1183900:CDS 55.0%
GGTGACCCTTCAAAACGGGC+TGG + chr8_1:19402656-19402675 Msa1183900:CDS 60.0%
!! GACCCTTCAAAACGGGCTGG+TGG + chr8_1:19402659-19402678 Msa1183900:CDS 60.0%
! GCACCACCAGCCCGTTTTGA+AGG - chr8_1:19402665-19402684 None:intergenic 60.0%
CTGCTGGCATAACTGGTCGC+AGG - chr8_1:19403058-19403077 None:intergenic 60.0%
CTGCGACCAGTTATGCCAGC+AGG + chr8_1:19403056-19403075 Msa1183900:CDS 60.0%
!! TTCATTGGTGGTGGCGGTGG+CGG - chr8_1:19403244-19403263 None:intergenic 60.0%
!! ACCTTCATTGGTGGTGGCGG+TGG - chr8_1:19403247-19403266 None:intergenic 60.0%
CCGCCACCACCAATGAAGGT+TGG + chr8_1:19403247-19403266 Msa1183900:CDS 60.0%
ACCCCGACAGCATCAACTGG+TGG - chr8_1:19403274-19403293 None:intergenic 60.0%
CCAACCCCGACAGCATCAAC+TGG - chr8_1:19403277-19403296 None:intergenic 60.0%
! CCAGTTGATGCTGTCGGGGT+TGG + chr8_1:19403274-19403293 Msa1183900:CDS 60.0%
CGGTGGCTCTCTGCAACCCA+CGG - chr8_1:19399925-19399944 None:intergenic 65.0%
GCCAGCAGGGATCTGATCCG+CGG + chr8_1:19403070-19403089 Msa1183900:CDS 65.0%
! GGCGGCGGCTCATTTTCCAC+TGG - chr8_1:19403226-19403245 None:intergenic 65.0%
GCCACCGCCACCACCAATGA+AGG + chr8_1:19403243-19403262 Msa1183900:CDS 65.0%
GCCGCGGATCAGATCCCTGC+TGG - chr8_1:19403074-19403093 None:intergenic 70.0%
!! ATTGGTGGTGGCGGTGGCGG+CGG - chr8_1:19403241-19403260 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_1 gene 19399428 19403740 19399428 ID=Msa1183900;Name=Msa1183900
chr8_1 mRNA 19399428 19403740 19399428 ID=Msa1183900-mRNA-1;Parent=Msa1183900;Name=Msa1183900-mRNA-1;_AED=0.04;_eAED=0.04;_QI=171|1|1|1|0.5|0.33|3|368|771
chr8_1 exon 19399428 19399547 19399428 ID=Msa1183900-mRNA-1:exon:7498;Parent=Msa1183900-mRNA-1
chr8_1 exon 19400212 19401686 19400212 ID=Msa1183900-mRNA-1:exon:7499;Parent=Msa1183900-mRNA-1
chr8_1 exon 19402481 19403740 19402481 ID=Msa1183900-mRNA-1:exon:7500;Parent=Msa1183900-mRNA-1
chr8_1 five_prime_UTR 19399428 19399547 19399428 ID=Msa1183900-mRNA-1:five_prime_utr;Parent=Msa1183900-mRNA-1
chr8_1 five_prime_UTR 19400212 19400262 19400212 ID=Msa1183900-mRNA-1:five_prime_utr;Parent=Msa1183900-mRNA-1
chr8_1 CDS 19400263 19401686 19400263 ID=Msa1183900-mRNA-1:cds;Parent=Msa1183900-mRNA-1
chr8_1 CDS 19402481 19403372 19402481 ID=Msa1183900-mRNA-1:cds;Parent=Msa1183900-mRNA-1
chr8_1 three_prime_UTR 19403373 19403740 19403373 ID=Msa1183900-mRNA-1:three_prime_utr;Parent=Msa1183900-mRNA-1
Gene Sequence

>Msa1183900

ATGGAGAGGTATTCAGAGTCAAAAATACATCCTCGAAACTTGCCGATTTTGGTTGAGGTTTCACCACATACGGCGGCAACTGTAAGAGAGGTAGGTCAGAGTCAGAGACTAAATGGGCAGGAGTTTTCAAATGCTAGGTGGATTTCAGCTAGAGAATTGAATCAATTGTCGCAGGGAAGGGATGTGCCTATGACACGTTTGGCCTCGATCAGAGAAGTGGCTCAGTTGTCGAATGCACGGATTTTATTGGTTCAAGATGATATGGAATTTGATACTAGAGAGTCTCCTGAGTCTATCTCCTTTGAGCCTACTCGGACATGGAAAGGAAAGACGTCTTTACTTGAAGTTGAAGGAGAAGATCTGATGTATGATGTAGACACATTGAAGGAAAGCAGCGATTCGTTTGAGGACGGTGATCCGACTTTATTTGCCGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAACAAATCTGAGTCCGGATGCTTAATTAAGAACTTGCCCATGAAGGGTCCTTTCCTTGAAGATCTCTCAATCCGTGTTACCGGGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGAAAGTCTTGTTGAAGAACTGAATGACACGGGGAACATATCCTCGCCTTTTGCAGGTTCTCGAGCGTCTCAGAATACTGAGAACTCTCTCCTTGCTCCAGATTCCGAGGAAAAAGAATGTGTTTGGGACGCTTCTTTGCCTCCTACACCTAATGGGAATGCCAGTCCACATAGTAGTATAGATAGTATTGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGTAGTGATGCAATGACCAGCGATGGCATGCTTAGTTTAGATAGAAACTTTGATAGCACTAAGGGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGCTAGCCGTGCAAGTGATAGCAGTGGCCTCAGTGATGACAGTAACTGGAGCAACCTTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCCAGGTGGAATGCTATCCTTGCCGTCCGATTACGAGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCGGAGCTGAGTGGAACTCGGTGTTATTTTGCTATGAAGGTTATGGACAAGGCGTCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACGGAGAGAGAGATATTGCAGTTGCTAGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACCGACCGTTTCTCTTGTTTGGTGATGGAATATTGTCCCGGAGGTGACCTACACACTTTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGATTTTATGCTGCTGAAGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTTCGAGACGATGGTCACATAATGCTTTCAGATTTCGATCTTTCCCTCAGATGTACTGTTTTGCCTACTCTTGTTAGAGGTTATGACGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGTATGCATACAACCTGCATGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGGAAGCCAAGAGCTGAACCTGGGTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCTGAGCCTACTGCTGCCCGATCTATGTCCTTCGTCGGTACCCACGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATATTCTTGCATGAACTGTTATACGGTAAAACCCCTTTCAAAGGGTCGGGAAACCGTGCTACGCTTTTCAACGTAGTAGGTCAGCAGCTCAAATTTCCCGAATCACCTGCGACCAGTTATGCCAGCAGGGATCTGATCCGCGGCTTACTCGTGAAAGAGCCGCAACATCGTCTTGGGGTTAAGAGAGGTGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTAAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGACCAGTGGAAAATGAGCCGCCGCCACCGCCACCACCAATGAAGGTTGGACCACCAGTTGATGCTGTCGGGGTTGGCAGTACTAGTAAGAGGATGTCGGGGAATAATGAAATGAAGTCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAG
Protein sequence

>Msa1183900

MERYSESKIHPRNLPILVEVSPHTAATVREVGQSQRLNGQEFSNARWISARELNQLSQGRDVPMTRLASIREVAQLSNARILLVQDDMEFDTRESPESISFEPTRTWKGKTSLLEVEGEDLMYDVDTLKESSDSFEDGDPTLFAGASHPPEPVDTDLMRTVYVPIGQNKSESGCLIKNLPMKGPFLEDLSIRVTGKKPSPIVLSPQESLVEELNDTGNISSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPNGNASPHSSIDSIGVVKAMSIANSCASTYRSDAMTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDGDPSKRAGGAFCVQPACIEPTSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPPMKVGPPVDAVGVGSTSKRMSGNNEMKSGGKYLDFEFF*