AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1267930


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267930 MtrunA17_Chr8g0379171 99.427 524 3 0 1 524 1 524 0.0 1059
Msa1267930 MtrunA17_Chr2g0284061 83.397 524 87 0 1 524 1 524 0.0 916
Msa1267930 MtrunA17_Chr3g0119521 72.587 518 141 1 8 524 3 520 0.0 793
Msa1267930 MtrunA17_Chr8g0364611 59.846 518 206 1 7 522 14 531 0.0 645
Msa1267930 MtrunA17_Chr3g0117941 59.653 518 207 1 7 522 13 530 0.0 633
Msa1267930 MtrunA17_Chr4g0059331 59.266 518 209 1 7 522 13 530 0.0 629
Msa1267930 MtrunA17_Chr1g0154001 57.534 511 217 0 12 522 35 545 0.0 607
Msa1267930 MtrunA17_Chr5g0414131 56.298 524 221 4 5 522 15 536 0.0 597
Msa1267930 MtrunA17_Chr1g0207021 54.356 528 232 4 1 522 1 525 0.0 572
Msa1267930 MtrunA17_Chr3g0134911 48.998 549 240 5 9 522 40 583 0.0 550
Msa1267930 MtrunA17_Chr5g0405471 51.206 539 238 6 5 522 26 560 0.0 544
Msa1267930 MtrunA17_Chr8g0367361 35.727 543 309 6 11 521 234 768 3.49e-112 350
Msa1267930 MtrunA17_Chr2g0320981 36.381 536 303 5 20 521 147 678 6.53e-111 344
Msa1267930 MtrunA17_Chr5g0412181 37.170 530 297 5 20 517 168 693 1.26e-109 342
Msa1267930 MtrunA17_Chr4g0027121 35.261 536 310 5 20 521 154 686 1.74e-104 328
Msa1267930 MtrunA17_Chr2g0332871 33.598 503 288 6 40 521 166 643 4.23e-96 305
Msa1267930 MtrunA17_Chr8g0379181 88.889 54 6 0 401 454 9 62 3.23e-26 101
Msa1267930 MtrunA17_Chr5g0418111 64.286 56 20 0 455 510 39 94 7.64e-19 81.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1267930 AT2G34190.1 83.588 524 86 0 1 524 1 524 0.0 926
Msa1267930 AT2G05760.1 70.077 518 154 1 8 524 3 520 0.0 764
Msa1267930 AT5G62890.1 59.266 518 209 1 7 522 13 530 0.0 628
Msa1267930 AT5G62890.2 59.266 518 209 1 7 522 13 530 0.0 628
Msa1267930 AT5G62890.3 59.266 518 209 1 7 522 13 530 0.0 628
Msa1267930 AT1G60030.1 57.198 514 218 1 11 522 23 536 0.0 621
Msa1267930 AT2G26510.1 57.553 523 221 1 1 522 25 547 0.0 612
Msa1267930 AT1G10540.1 54.771 524 231 4 5 522 14 537 0.0 590
Msa1267930 AT5G49990.2 56.371 518 224 1 7 522 9 526 0.0 586
Msa1267930 AT5G49990.3 56.371 518 224 1 7 522 9 526 0.0 586
Msa1267930 AT5G49990.1 56.371 518 224 1 7 522 9 526 0.0 586
Msa1267930 AT5G49990.4 56.371 518 224 1 7 522 9 526 0.0 586
Msa1267930 AT1G49960.1 55.832 523 228 2 3 522 2 524 0.0 577
Msa1267930 AT1G65550.1 50.758 528 248 5 5 522 14 539 0.0 552
Msa1267930 AT5G62890.4 58.482 448 186 0 7 454 13 460 0.0 535
Msa1267930 AT2G26510.3 57.867 375 158 0 1 375 25 399 1.11e-147 430
Msa1267930 AT1G10540.2 55.200 375 164 3 5 375 14 388 3.07e-144 421
Msa1267930 AT2G26510.2 57.735 362 153 0 1 362 25 386 6.75e-142 416
Msa1267930 AT5G25420.1 42.986 442 171 5 5 439 26 393 6.88e-123 367
Msa1267930 AT2G27810.1 35.261 536 310 6 20 521 169 701 1.36e-102 324
Msa1267930 AT4G38050.1 35.581 534 308 5 20 521 175 704 3.08e-99 315
Msa1267930 AT2G27810.4 33.750 560 310 7 20 521 169 725 2.90e-97 310
Msa1267930 AT2G27810.2 36.256 422 250 4 20 423 169 589 2.39e-82 268
Msa1267930 AT2G27810.3 36.533 375 219 4 20 376 169 542 9.03e-71 236

Find 150 sgRNAs with CRISPR-Local

Find 276 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCCAGCATACAAATTATTT+TGG 0.101959 8_3:+273301 Msa1267930:CDS
TAATTTGTTTCAGGTAAATT+TGG 0.196029 8_3:+274893 Msa1267930:intron
AAAGGTTCGATATATGTTTA+TGG 0.205413 8_3:+275923 Msa1267930:three_prime_UTR
TTCATTTCTTGTTCCTTCAA+TGG 0.226954 8_3:+271937 Msa1267930:CDS
TTTGATGCTGGCCACTCTTT+TGG 0.230201 8_3:+274303 Msa1267930:CDS
GTAATTACATTAGTTGGTTT+TGG 0.246380 8_3:+273517 Msa1267930:CDS
GGTGAATGACTTATCTCTTC+TGG 0.248677 8_3:-271698 None:intergenic
AATTGGGTGGACAATGAATT+TGG 0.256401 8_3:-275890 None:intergenic
TCATAACAACCACAGTGATA+TGG 0.275276 8_3:+274033 Msa1267930:CDS
ATTGATTATTGCTGTGTTCT+TGG 0.284940 8_3:+275530 Msa1267930:CDS
ATTTCAGAGAATACACTATC+AGG 0.289187 8_3:+275182 Msa1267930:CDS
CCATGGCATTCCTCTATCTT+TGG 0.292772 8_3:-275580 None:intergenic
TTCTTCAAGCTAGTAGGATT+TGG 0.295874 8_3:+271618 Msa1267930:five_prime_UTR
TTCACCAATGGATCAACTTC+AGG 0.304968 8_3:+271715 Msa1267930:CDS
GGACAATACTCTTGACTATA+AGG 0.306775 8_3:+275551 Msa1267930:CDS
AGCAAAGTTGGAGGTGATTA+TGG 0.308536 8_3:+271664 Msa1267930:exon
AAACCAACTAATGTAATTAC+TGG 0.315074 8_3:-273514 None:intergenic
AAGAATAGAAGATGGTATTC+AGG 0.318777 8_3:-275494 None:intergenic
AACCTTTCCAATGCAGCAAT+TGG 0.318940 8_3:-275907 None:intergenic
ATGATATTCTTTGCAATGTT+AGG 0.319292 8_3:+274775 Msa1267930:CDS
CTCCTATCACTGTTGGTAAC+CGG 0.320169 8_3:-273004 None:intergenic
AAGAGACATGTTAGAGTTAG+AGG 0.320505 8_3:+275709 Msa1267930:three_prime_UTR
GTGGGGACTTGTGTTGAAAT+TGG 0.325063 8_3:+273672 Msa1267930:CDS
AAATATGGGCTATTTGTTCT+AGG 0.325670 8_3:+273333 Msa1267930:CDS
TCATTTCTTGTTCCTTCAAT+GGG 0.346165 8_3:+271938 Msa1267930:CDS
GTGTATTCTCTGAAATATTC+AGG 0.350685 8_3:-275175 None:intergenic
ATCTCATTTCTTCCGCTCCT+TGG 0.363626 8_3:+274141 Msa1267930:CDS
TATAGATTCAAATCCATCTT+GGG 0.371990 8_3:+271751 Msa1267930:CDS
CTTGTTTGTAGTGTTCTCTC+AGG 0.378594 8_3:+273710 Msa1267930:CDS
AAAAGAAGGGTCACGAATAA+TGG 0.387784 8_3:-273057 None:intergenic
ACAGTGGAGACAATACTTCT+TGG 0.392031 8_3:+271869 Msa1267930:intron
TTTGGGATTTAGTCAAATAT+GGG 0.396617 8_3:+273319 Msa1267930:CDS
GAGCCGTGGTATCGGTTGGC+AGG 0.401838 8_3:+274542 Msa1267930:CDS
GTTCCAGTAATTACATTAGT+TGG 0.413657 8_3:+273511 Msa1267930:CDS
TGCCAACACGGTTGCTTCCT+AGG 0.415342 8_3:-274720 None:intergenic
TGTCCACCCAATTGCTGCAT+TGG 0.415729 8_3:+275900 Msa1267930:three_prime_UTR
GGTATCGGTTGGCAGGGAAT+TGG 0.421613 8_3:+274549 Msa1267930:CDS
AGGGTTATTCAAGTTTCTGC+TGG 0.424755 8_3:+274748 Msa1267930:CDS
TACACTATCAGGGCCTTTCA+TGG 0.429220 8_3:+275193 Msa1267930:CDS
TCCCAAAATAATTTGTATGC+TGG 0.431042 8_3:-273303 None:intergenic
AGAGAGAATGTAGGACTCCT+AGG 0.436161 8_3:+274703 Msa1267930:intron
CATAACAACCACAGTGATAT+GGG 0.441500 8_3:+274034 Msa1267930:CDS
CAACATTTCTTCAAGCTAGT+AGG 0.442413 8_3:+271612 Msa1267930:five_prime_UTR
ATAATCATAAGTAGCAAAGT+TGG 0.442518 8_3:+271652 Msa1267930:five_prime_UTR
ACCTTTCCAATGCAGCAATT+GGG 0.443337 8_3:-275906 None:intergenic
TGTTGCAGGATGATAAAGTA+AGG 0.446203 8_3:+272919 Msa1267930:intron
GTATAGATTCAAATCCATCT+TGG 0.446520 8_3:+271750 Msa1267930:CDS
AGGAGGATCATATGCATTCA+TGG 0.453580 8_3:+273022 Msa1267930:CDS
TCATGTAATAACAGAACAAA+AGG 0.465001 8_3:+275781 Msa1267930:three_prime_UTR
ACATCATTTCCACCCATTGA+AGG 0.466107 8_3:-271950 None:intergenic
AACATAGTTGTAGGACAGAC+AGG 0.467914 8_3:+274114 Msa1267930:CDS
TCACGAATAATGGATACAAT+GGG 0.468928 8_3:-273047 None:intergenic
TGCTCATACCAAAGCTGGAT+GGG 0.470991 8_3:+275219 Msa1267930:CDS
TGCAAACACTGTTTGGAACC+CGG 0.473980 8_3:+272985 Msa1267930:CDS
AATGATAGATGACCCACAAT+TGG 0.477393 8_3:+273082 Msa1267930:CDS
TCCTATCACTGTTGGTAACC+GGG 0.477745 8_3:-273003 None:intergenic
GCCAACCGATACCACGGCTC+AGG 0.478834 8_3:-274539 None:intergenic
AGAAATGTACTAACCAATTG+TGG 0.479205 8_3:-273095 None:intergenic
GAATAGACAAGCCTAAGAAA+AGG 0.479304 8_3:-275153 None:intergenic
GGTCCTGCTCATACCAAAGC+TGG 0.479360 8_3:+275214 Msa1267930:CDS
TCACCAATGGATCAACTTCA+GGG 0.480974 8_3:+271716 Msa1267930:CDS
GAAACTCACCCATCCAGCTT+TGG 0.485860 8_3:-275227 None:intergenic
GTACACAGAAACTGTTGAAC+CGG 0.486278 8_3:-274604 None:intergenic
ACCCGGTTACCAACAGTGAT+AGG 0.489452 8_3:+273002 Msa1267930:CDS
ATTGAAGGAACAAGAAATGA+AGG 0.499359 8_3:-271935 None:intergenic
TTGTGTTCAGAGAGATTAGC+GGG 0.499435 8_3:-271592 None:intergenic
GCACCCCACTCAAGAGGGTA+TGG 0.499949 8_3:-274273 None:intergenic
ATGTAACTCAACATAGTTGT+AGG 0.501947 8_3:+274105 Msa1267930:CDS
TCATCTATCATTGCAAAAGA+AGG 0.502196 8_3:-273071 None:intergenic
AAACCCTGAAGTTGATCCAT+TGG 0.502837 8_3:-271719 None:intergenic
AAGAAGCGGTTGAGATTGAA+AGG 0.503438 8_3:-275660 None:intergenic
AACCGGTTAGTGTTCCGAAA+AGG 0.514137 8_3:-274587 None:intergenic
ATGAGGAACCTCTTTATCAC+TGG 0.516659 8_3:+275124 Msa1267930:CDS
CATGTCCTGAGCCGTGGTAT+CGG 0.518412 8_3:+274534 Msa1267930:CDS
AATAGACAAGCCTAAGAAAA+GGG 0.522987 8_3:-275152 None:intergenic
TTTCTTGTTCCTTCAATGGG+TGG 0.525960 8_3:+271941 Msa1267930:CDS
GCAATAATCAATGCAACAGT+TGG 0.533111 8_3:-275519 None:intergenic
AAGGACAGTGCCAAAGATAG+AGG 0.534675 8_3:+275570 Msa1267930:CDS
TCCTGAGCCGTGGTATCGGT+TGG 0.538613 8_3:+274538 Msa1267930:CDS
TATGATCCTCCTATCACTGT+TGG 0.541705 8_3:-273011 None:intergenic
GGTGCTCCTACATTTGATGC+TGG 0.543276 8_3:+274291 Msa1267930:CDS
CCACGGCTCAGGACATGAGC+AGG 0.543664 8_3:-274528 None:intergenic
CATCCAGCTTTGGTATGAGC+AGG 0.545272 8_3:-275217 None:intergenic
GAAATGTACTAACCAATTGT+GGG 0.546919 8_3:-273094 None:intergenic
GAGTGGCCAGCATCAAATGT+AGG 0.547055 8_3:-274297 None:intergenic
CTGCTCATACCAAAGCTGGA+TGG 0.547379 8_3:+275218 Msa1267930:CDS
GTCACGAATAATGGATACAA+TGG 0.549123 8_3:-273048 None:intergenic
CAGAAACTTGAATAACCCTT+CGG 0.550365 8_3:-274744 None:intergenic
CTCAGGACATGAGCAGGCGG+TGG 0.550799 8_3:-274522 None:intergenic
ACCCAATTGCTGCATTGGAA+AGG 0.551724 8_3:+275905 Msa1267930:three_prime_UTR
CAACTATGTTGAGTTACATC+CGG 0.554296 8_3:-274101 None:intergenic
GGGCAACACCAGTGATAAAG+AGG 0.555822 8_3:-275132 None:intergenic
GACATGAGCAGGCGGTGGTG+TGG 0.560084 8_3:-274517 None:intergenic
CATGCAAACATACCCCAAGA+TGG 0.560663 8_3:-271764 None:intergenic
TAACCCTTCGGCTGCCAACA+CGG 0.560723 8_3:-274732 None:intergenic
TCAAGCTAGTAGGATTTGGA+AGG 0.562599 8_3:+271622 Msa1267930:five_prime_UTR
AAACTAAGTGTCACAGTAGT+GGG 0.565633 8_3:+271532 Msa1267930:five_prime_UTR
ATTTGACAGAGGTTTCCCTA+TGG 0.567601 8_3:+273543 Msa1267930:CDS
GTTCCTCATTGAATTCATGT+TGG 0.571510 8_3:-275110 None:intergenic
ATCATAAGTAGCAAAGTTGG+AGG 0.573057 8_3:+271655 Msa1267930:five_prime_UTR
GAAACTAAGTGTCACAGTAG+TGG 0.573297 8_3:+271531 Msa1267930:five_prime_UTR
GCAACCGTGTTGGCAGCCGA+AGG 0.576172 8_3:+274728 Msa1267930:CDS
CACTACAAACAAGATTAGCA+TGG 0.579230 8_3:-273700 None:intergenic
CTCCTAGGAAGCAACCGTGT+TGG 0.580038 8_3:+274718 Msa1267930:CDS
TTTCAGAGAATACACTATCA+GGG 0.580243 8_3:+275183 Msa1267930:CDS
AGTTGGTGAAGAATAGAAGA+TGG 0.581474 8_3:-275502 None:intergenic
CCTGCTCATGTCCTGAGCCG+TGG 0.582782 8_3:+274528 Msa1267930:CDS
TTTCCAATGCAGCAATTGGG+TGG 0.585119 8_3:-275903 None:intergenic
AGCCGTGGTATCGGTTGGCA+GGG 0.590320 8_3:+274543 Msa1267930:CDS
GGTATGAGCAGGACCATGAA+AGG 0.591544 8_3:-275206 None:intergenic
AATAAAACCACTAAAAGTGT+TGG 0.592486 8_3:-275860 None:intergenic
CATCTATCATTGCAAAAGAA+GGG 0.595562 8_3:-273070 None:intergenic
TTCCCTGCCAACCGATACCA+CGG 0.595568 8_3:-274545 None:intergenic
AGAGCAAATCTCTCTAGTAT+CGG 0.602160 8_3:-274008 None:intergenic
CATCTTGACAGAGAGAATGT+AGG 0.602743 8_3:+274694 Msa1267930:intron
ACTACAAACAAGATTAGCAT+GGG 0.605867 8_3:-273699 None:intergenic
CAGCCATCATTCCAAAAGAG+TGG 0.607490 8_3:-274314 None:intergenic
AGATTCCATACCCTCTTGAG+TGG 0.607942 8_3:+274268 Msa1267930:CDS
ATGCTACAATTAGTGCACCT+TGG 0.608851 8_3:-273280 None:intergenic
TAGGAGCACCCCACTCAAGA+GGG 0.617390 8_3:-274278 None:intergenic
AGAGATAAGTCATTCACCAA+TGG 0.619804 8_3:+271703 Msa1267930:CDS
GCACATCTATTGACAGCGAG+TGG 0.619907 8_3:+274062 Msa1267930:CDS
GATTCCATACCCTCTTGAGT+GGG 0.620879 8_3:+274269 Msa1267930:CDS
GTAGGAGCACCCCACTCAAG+AGG 0.622953 8_3:-274279 None:intergenic
AAGATAGAGGAATGCCATGG+TGG 0.624875 8_3:+275583 Msa1267930:CDS
TATGTTGAGTTACATCCGGC+CGG 0.624907 8_3:-274097 None:intergenic
CAACCGTGTTGGCAGCCGAA+GGG 0.626544 8_3:+274729 Msa1267930:CDS
AGATAGAGGAATGCCATGGT+GGG 0.635902 8_3:+275584 Msa1267930:CDS
GTTGCAGGATGATAAAGTAA+GGG 0.641584 8_3:+272920 Msa1267930:intron
TAAGTGTCACAGTAGTGGGA+AGG 0.643084 8_3:+271536 Msa1267930:five_prime_UTR
TGGAGCATACAAACACCGGC+CGG 0.643571 8_3:+274082 Msa1267930:CDS
ATAGATTCAAATCCATCTTG+GGG 0.643928 8_3:+271752 Msa1267930:CDS
CGGTTACCAACAGTGATAGG+AGG 0.653551 8_3:+273005 Msa1267930:CDS
GCAGGATGATAAAGTAAGGG+TGG 0.654485 8_3:+272923 Msa1267930:intron
AGCACAATGAGAGCAGTCCA+AGG 0.659630 8_3:+273263 Msa1267930:CDS
CGAGTGGAGCATACAAACAC+CGG 0.663938 8_3:+274078 Msa1267930:CDS
CGGCTCAGGACATGAGCAGG+CGG 0.664877 8_3:-274525 None:intergenic
ATTCCATACCCTCTTGAGTG+GGG 0.671790 8_3:+274270 Msa1267930:CDS
GTTCTAAACTTAGCCCACCA+TGG 0.673056 8_3:-275597 None:intergenic
GTTGTGTTCAGAGAGATTAG+CGG 0.673069 8_3:-271593 None:intergenic
TATTGGTACCAACCAAGGAG+CGG 0.679674 8_3:-274153 None:intergenic
ATTACTGGAACCATTCCAAG+TGG 0.685617 8_3:-273499 None:intergenic
CCAAAGATAGAGGAATGCCA+TGG 0.686802 8_3:+275580 Msa1267930:CDS
TCACCAACATGAATTCAATG+AGG 0.689628 8_3:+275107 Msa1267930:CDS
ACATAGTTGTAGGACAGACA+GGG 0.696081 8_3:+274115 Msa1267930:CDS
TCTATGATGGAGGAAAGAAG+CGG 0.698502 8_3:-275674 None:intergenic
TTACTGGAACCATTCCAAGT+GGG 0.700944 8_3:-273498 None:intergenic
CACGAATAATGGATACAATG+GGG 0.733637 8_3:-273046 None:intergenic
TGCATATGCCCATATCACTG+TGG 0.777461 8_3:-274042 None:intergenic
TGTGTTCAGAGAGATTAGCG+GGG 0.790744 8_3:-271591 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATAATTAATAAATGTGTTT+TGG - chr8_3:272370-272389 None:intergenic 10.0%
!!! ATCTAAATATATATTTTTGT+TGG + chr8_3:273612-273631 Msa1267930:intron 10.0%
!! CTTCACAAATATATAAAATA+AGG - chr8_3:273363-273382 None:intergenic 15.0%
!!! ATATGGTTTTCATTTTTTAT+GGG + chr8_3:274651-274670 Msa1267930:intron 15.0%
!!! TGGTTTTCAACATTATATTT+TGG + chr8_3:271889-271908 Msa1267930:CDS 20.0%
!! TAGTTAAAAGAATTGAAGTT+AGG - chr8_3:271985-272004 None:intergenic 20.0%
!!! TTATTTTTGATAAGATGCAA+AGG + chr8_3:272718-272737 Msa1267930:intron 20.0%
!!! TATTTTTGATAAGATGCAAA+GGG + chr8_3:272719-272738 Msa1267930:intron 20.0%
!!! TATTTTCTTTTTATCGTGTT+TGG + chr8_3:272752-272771 Msa1267930:intron 20.0%
!!! TTTAAGTTTAAATTAGCTTG+TGG + chr8_3:273765-273784 Msa1267930:intron 20.0%
!! CAAAGAAAATATTGAACTAT+TGG + chr8_3:274212-274231 Msa1267930:intron 20.0%
!! TATCATTGGAAAAATTATAC+CGG + chr8_3:274384-274403 Msa1267930:intron 20.0%
!!! TTTTCTTATTCTCATTCATA+TGG + chr8_3:274634-274653 Msa1267930:intron 20.0%
!!! CATATGGTTTTCATTTTTTA+TGG + chr8_3:274650-274669 Msa1267930:intron 20.0%
!!! TAATTTGTTTCAGGTAAATT+TGG + chr8_3:274893-274912 Msa1267930:intron 20.0%
!!! TATGTAAGAATTTTCTATGA+TGG - chr8_3:275690-275709 None:intergenic 20.0%
! ATAATCATAAGTAGCAAAGT+TGG + chr8_3:271652-271671 Msa1267930:five_prime_UTR 25.0%
! TATAGATTCAAATCCATCTT+GGG + chr8_3:271751-271770 Msa1267930:CDS 25.0%
!!! TTGTTTTGAATTGTTAACAG+TGG + chr8_3:271853-271872 Msa1267930:intron 25.0%
!!! CAACATTATATTTTGGCATT+AGG + chr8_3:271896-271915 Msa1267930:CDS 25.0%
!! TAATTCCCTTTTATTGTGTT+TGG + chr8_3:272095-272114 Msa1267930:intron 25.0%
! TTGATCCAAACACAATAAAA+GGG - chr8_3:272103-272122 None:intergenic 25.0%
! ATTGATCCAAACACAATAAA+AGG - chr8_3:272104-272123 None:intergenic 25.0%
!!! TGGATCAATGTTTTAACAAT+CGG + chr8_3:272115-272134 Msa1267930:intron 25.0%
!!! TTTGTCTATTGGTTTAATCA+TGG + chr8_3:272226-272245 Msa1267930:intron 25.0%
!! TGAATTTTACACTGTTGTTA+AGG + chr8_3:272298-272317 Msa1267930:intron 25.0%
! AAATACCCATGACTATTTAT+TGG + chr8_3:272558-272577 Msa1267930:intron 25.0%
! TCTATCCAATAAATAGTCAT+GGG - chr8_3:272566-272585 None:intergenic 25.0%
!!! CTACTTTGATTTGATTTTGA+TGG + chr8_3:272679-272698 Msa1267930:intron 25.0%
!!! ATTTTTTTTGTCTTGTGTAC+TGG + chr8_3:272778-272797 Msa1267930:intron 25.0%
!! ATCCAGCATACAAATTATTT+TGG + chr8_3:273301-273320 Msa1267930:CDS 25.0%
!! TCCAGCATACAAATTATTTT+GGG + chr8_3:273302-273321 Msa1267930:CDS 25.0%
!!! TTTTGGGATTTAGTCAAATA+TGG + chr8_3:273318-273337 Msa1267930:CDS 25.0%
!! TTTGGGATTTAGTCAAATAT+GGG + chr8_3:273319-273338 Msa1267930:CDS 25.0%
! AAACCAACTAATGTAATTAC+TGG - chr8_3:273517-273536 None:intergenic 25.0%
!!! GTAATTACATTAGTTGGTTT+TGG + chr8_3:273517-273536 Msa1267930:CDS 25.0%
! CAACACATCATAATACATTA+AGG - chr8_3:273951-273970 None:intergenic 25.0%
! CTTCATAAAATGACTATCAT+TGG + chr8_3:274370-274389 Msa1267930:intron 25.0%
!!! TTATTATTTTGACAGTCAAC+TGG + chr8_3:274462-274481 Msa1267930:intron 25.0%
! ATGATATTCTTTGCAATGTT+AGG + chr8_3:274775-274794 Msa1267930:CDS 25.0%
! TGAAACAAATTATGAAACAC+AGG - chr8_3:274885-274904 None:intergenic 25.0%
!!! TGTGTTTCATAATTTGTTTC+AGG + chr8_3:274884-274903 Msa1267930:intron 25.0%
! AGTATATAGCAGCAAAAATA+GGG - chr8_3:274943-274962 None:intergenic 25.0%
!! AGCATCTATTGATAATTGTT+TGG + chr8_3:275018-275037 Msa1267930:intron 25.0%
!!! ATATTTTTTTCAGCTTCTGT+AGG + chr8_3:275067-275086 Msa1267930:intron 25.0%
!!! TATTTTTTTCAGCTTCTGTA+GGG + chr8_3:275068-275087 Msa1267930:intron 25.0%
! TCATGTAATAACAGAACAAA+AGG + chr8_3:275781-275800 Msa1267930:three_prime_UTR 25.0%
!! ATTTTTACCAACACTTTTAG+TGG + chr8_3:275853-275872 Msa1267930:three_prime_UTR 25.0%
!! AATAAAACCACTAAAAGTGT+TGG - chr8_3:275863-275882 None:intergenic 25.0%
! AAAGGTTCGATATATGTTTA+TGG + chr8_3:275923-275942 Msa1267930:three_prime_UTR 25.0%
!! AAACACCGAGAATTTTTATT+TGG + chr8_3:275955-275974 Msa1267930:three_prime_UTR 25.0%
GTATAGATTCAAATCCATCT+TGG + chr8_3:271750-271769 Msa1267930:CDS 30.0%
ATAGATTCAAATCCATCTTG+GGG + chr8_3:271752-271771 Msa1267930:CDS 30.0%
ATTGAAGGAACAAGAAATGA+AGG - chr8_3:271938-271957 None:intergenic 30.0%
TTCATTTCTTGTTCCTTCAA+TGG + chr8_3:271937-271956 Msa1267930:CDS 30.0%
TCATTTCTTGTTCCTTCAAT+GGG + chr8_3:271938-271957 Msa1267930:CDS 30.0%
AACTGGTTGAATTGGAAATT+GGG + chr8_3:272169-272188 Msa1267930:intron 30.0%
GTATGTTTAACAGGTTGTAA+CGG + chr8_3:272192-272211 Msa1267930:intron 30.0%
! TAACCTACTAGTTTGTCTAT+TGG + chr8_3:272215-272234 Msa1267930:intron 30.0%
AAACCAATAGACAAACTAGT+AGG - chr8_3:272221-272240 None:intergenic 30.0%
AGTTGAATCAGATTGAATAG+TGG + chr8_3:272263-272282 Msa1267930:intron 30.0%
GACAATGAAAAATACTAGCA+AGG + chr8_3:272494-272513 Msa1267930:intron 30.0%
CTCTATCCAATAAATAGTCA+TGG - chr8_3:272567-272586 None:intergenic 30.0%
CATGACTATTTATTGGATAG+AGG + chr8_3:272565-272584 Msa1267930:intron 30.0%
!! TTGATTTTGATGGATGATAC+TGG + chr8_3:272689-272708 Msa1267930:intron 30.0%
TGAATATCAATCCTCTATCT+TGG - chr8_3:272887-272906 None:intergenic 30.0%
CATATATTGCTTATTGTTGC+AGG + chr8_3:272905-272924 Msa1267930:intron 30.0%
!!! CAAACTCTACTTTTTGTTGA+AGG + chr8_3:272948-272967 Msa1267930:CDS 30.0%
!! TCACGAATAATGGATACAAT+GGG - chr8_3:273050-273069 None:intergenic 30.0%
CATCTATCATTGCAAAAGAA+GGG - chr8_3:273073-273092 None:intergenic 30.0%
TCATCTATCATTGCAAAAGA+AGG - chr8_3:273074-273093 None:intergenic 30.0%
GAAATGTACTAACCAATTGT+GGG - chr8_3:273097-273116 None:intergenic 30.0%
AGAAATGTACTAACCAATTG+TGG - chr8_3:273098-273117 None:intergenic 30.0%
! TCCCAAAATAATTTGTATGC+TGG - chr8_3:273306-273325 None:intergenic 30.0%
! AAATATGGGCTATTTGTTCT+AGG + chr8_3:273333-273352 Msa1267930:CDS 30.0%
AAAATCTGCATGAAAGGAAA+AGG - chr8_3:273474-273493 None:intergenic 30.0%
GTTCCAGTAATTACATTAGT+TGG + chr8_3:273511-273530 Msa1267930:CDS 30.0%
ACTACAAACAAGATTAGCAT+GGG - chr8_3:273702-273721 None:intergenic 30.0%
TCAGGTATATGTCAAATAAC+TGG + chr8_3:273728-273747 Msa1267930:intron 30.0%
TATATGTCAAATAACTGGAC+TGG + chr8_3:273733-273752 Msa1267930:intron 30.0%
!! TTAAATTAGCTTGTGGAATG+TGG + chr8_3:273772-273791 Msa1267930:intron 30.0%
GTAACAAATTGAACAGAAAG+AGG - chr8_3:273904-273923 None:intergenic 30.0%
!! TCAATTTGTTACACCTGAAT+AGG + chr8_3:273912-273931 Msa1267930:intron 30.0%
TCATTCATTCAAACCTATTC+AGG - chr8_3:273928-273947 None:intergenic 30.0%
ATGTAACTCAACATAGTTGT+AGG + chr8_3:274105-274124 Msa1267930:CDS 30.0%
!!! TGTTTTAGTCTCATTAGTTG+AGG + chr8_3:274338-274357 Msa1267930:CDS 30.0%
!!! GTTTTCATTTTTTATGGGAC+AGG + chr8_3:274656-274675 Msa1267930:intron 30.0%
CAGTATATAGCAGCAAAAAT+AGG - chr8_3:274944-274963 None:intergenic 30.0%
!! GCTATATACTGTGTTTTGTT+TGG + chr8_3:274953-274972 Msa1267930:CDS 30.0%
GATGCTGAAGTAAATTCAAA+GGG - chr8_3:275004-275023 None:intergenic 30.0%
AGATGCTGAAGTAAATTCAA+AGG - chr8_3:275005-275024 None:intergenic 30.0%
! GATAATTGTTTGGTCTTCTT+TGG + chr8_3:275028-275047 Msa1267930:intron 30.0%
AATAGACAAGCCTAAGAAAA+GGG - chr8_3:275155-275174 None:intergenic 30.0%
!! GTGTATTCTCTGAAATATTC+AGG - chr8_3:275178-275197 None:intergenic 30.0%
ATTTCAGAGAATACACTATC+AGG + chr8_3:275182-275201 Msa1267930:CDS 30.0%
TTTCAGAGAATACACTATCA+GGG + chr8_3:275183-275202 Msa1267930:CDS 30.0%
TCATTGAACTGCAAAATCAA+AGG - chr8_3:275471-275490 None:intergenic 30.0%
AAGAATAGAAGATGGTATTC+AGG - chr8_3:275497-275516 None:intergenic 30.0%
ATTGATTATTGCTGTGTTCT+TGG + chr8_3:275530-275549 Msa1267930:CDS 30.0%
! GTAAGAATTTTCTATGATGG+AGG - chr8_3:275687-275706 None:intergenic 30.0%
AAACTAAGTGTCACAGTAGT+GGG + chr8_3:271532-271551 Msa1267930:five_prime_UTR 35.0%
CAACATTTCTTCAAGCTAGT+AGG + chr8_3:271612-271631 Msa1267930:five_prime_UTR 35.0%
TTCTTCAAGCTAGTAGGATT+TGG + chr8_3:271618-271637 Msa1267930:five_prime_UTR 35.0%
ATCATAAGTAGCAAAGTTGG+AGG + chr8_3:271655-271674 Msa1267930:five_prime_UTR 35.0%
AGAGATAAGTCATTCACCAA+TGG + chr8_3:271703-271722 Msa1267930:CDS 35.0%
CTCTATGCAAATCTCTACTT+AGG + chr8_3:272062-272081 Msa1267930:intron 35.0%
TTCAGTTCAACTGGTTGAAT+TGG + chr8_3:272161-272180 Msa1267930:intron 35.0%
CAACTGGTTGAATTGGAAAT+TGG + chr8_3:272168-272187 Msa1267930:intron 35.0%
ACTGGTTGAATTGGAAATTG+GGG + chr8_3:272170-272189 Msa1267930:intron 35.0%
GAAATTGGGGTATGTTTAAC+AGG + chr8_3:272183-272202 Msa1267930:intron 35.0%
!! GTCTATTGGTTTAATCATGG+TGG + chr8_3:272229-272248 Msa1267930:intron 35.0%
TTGTCACATGCTAAATGAAG+TGG + chr8_3:272804-272823 Msa1267930:intron 35.0%
TGTTGCAGGATGATAAAGTA+AGG + chr8_3:272919-272938 Msa1267930:intron 35.0%
GTTGCAGGATGATAAAGTAA+GGG + chr8_3:272920-272939 Msa1267930:intron 35.0%
! ACACTTTTGCAAACACTGTT+TGG + chr8_3:272978-272997 Msa1267930:CDS 35.0%
!! CACGAATAATGGATACAATG+GGG - chr8_3:273049-273068 None:intergenic 35.0%
!! GTCACGAATAATGGATACAA+TGG - chr8_3:273051-273070 None:intergenic 35.0%
AAAAGAAGGGTCACGAATAA+TGG - chr8_3:273060-273079 None:intergenic 35.0%
AATGATAGATGACCCACAAT+TGG + chr8_3:273082-273101 Msa1267930:CDS 35.0%
!!! GGTTTTGGATTATTTGACAG+AGG + chr8_3:273532-273551 Msa1267930:CDS 35.0%
CAGTGTTGTACTATACCATA+GGG - chr8_3:273561-273580 None:intergenic 35.0%
TCAGTGTTGTACTATACCAT+AGG - chr8_3:273562-273581 None:intergenic 35.0%
CACTACAAACAAGATTAGCA+TGG - chr8_3:273703-273722 None:intergenic 35.0%
AGAGCAAATCTCTCTAGTAT+CGG - chr8_3:274011-274030 None:intergenic 35.0%
TCATAACAACCACAGTGATA+TGG + chr8_3:274033-274052 Msa1267930:CDS 35.0%
CATAACAACCACAGTGATAT+GGG + chr8_3:274034-274053 Msa1267930:CDS 35.0%
CAACTATGTTGAGTTACATC+CGG - chr8_3:274104-274123 None:intergenic 35.0%
! GGAATTGGAATTTTGCTGAA+TGG + chr8_3:274564-274583 Msa1267930:CDS 35.0%
! ATTTTGCTGAATGGCCTTTT+CGG + chr8_3:274573-274592 Msa1267930:CDS 35.0%
CAGAAACTTGAATAACCCTT+CGG - chr8_3:274747-274766 None:intergenic 35.0%
TTAGGTGAGTGGCAAATTAT+AGG + chr8_3:274793-274812 Msa1267930:intron 35.0%
TAGGTGAGTGGCAAATTATA+GGG + chr8_3:274794-274813 Msa1267930:intron 35.0%
ATAGCAGCAAAAATAGGGAA+TGG - chr8_3:274938-274957 None:intergenic 35.0%
!!! TGTGTTTTGTTTGGTCTTGT+AGG + chr8_3:274962-274981 Msa1267930:CDS 35.0%
TCACCAACATGAATTCAATG+AGG + chr8_3:275107-275126 Msa1267930:CDS 35.0%
GTTCCTCATTGAATTCATGT+TGG - chr8_3:275113-275132 None:intergenic 35.0%
GAATAGACAAGCCTAAGAAA+AGG - chr8_3:275156-275175 None:intergenic 35.0%
!! AGTTGGTGAAGAATAGAAGA+TGG - chr8_3:275505-275524 None:intergenic 35.0%
GCAATAATCAATGCAACAGT+TGG - chr8_3:275522-275541 None:intergenic 35.0%
GGACAATACTCTTGACTATA+AGG + chr8_3:275551-275570 Msa1267930:CDS 35.0%
AAGAGACATGTTAGAGTTAG+AGG + chr8_3:275709-275728 Msa1267930:three_prime_UTR 35.0%
AATTGGGTGGACAATGAATT+TGG - chr8_3:275893-275912 None:intergenic 35.0%
GAAACTAAGTGTCACAGTAG+TGG + chr8_3:271531-271550 Msa1267930:five_prime_UTR 40.0%
TTGTGTTCAGAGAGATTAGC+GGG - chr8_3:271595-271614 None:intergenic 40.0%
GTTGTGTTCAGAGAGATTAG+CGG - chr8_3:271596-271615 None:intergenic 40.0%
TCAAGCTAGTAGGATTTGGA+AGG + chr8_3:271622-271641 Msa1267930:five_prime_UTR 40.0%
AGCAAAGTTGGAGGTGATTA+TGG + chr8_3:271664-271683 Msa1267930:exon 40.0%
GGTGAATGACTTATCTCTTC+TGG - chr8_3:271701-271720 None:intergenic 40.0%
TTCACCAATGGATCAACTTC+AGG + chr8_3:271715-271734 Msa1267930:CDS 40.0%
TCACCAATGGATCAACTTCA+GGG + chr8_3:271716-271735 Msa1267930:CDS 40.0%
! AAACCCTGAAGTTGATCCAT+TGG - chr8_3:271722-271741 None:intergenic 40.0%
ACAGTGGAGACAATACTTCT+TGG + chr8_3:271869-271888 Msa1267930:intron 40.0%
TTTCTTGTTCCTTCAATGGG+TGG + chr8_3:271941-271960 Msa1267930:CDS 40.0%
ACATCATTTCCACCCATTGA+AGG - chr8_3:271953-271972 None:intergenic 40.0%
TCACATGCTAAATGAAGTGG+TGG + chr8_3:272807-272826 Msa1267930:intron 40.0%
CACATGCTAAATGAAGTGGT+GGG + chr8_3:272808-272827 Msa1267930:intron 40.0%
TCTCCCAAAAGAGGAAAATC+TGG + chr8_3:272831-272850 Msa1267930:intron 40.0%
! CCACCAGATTTTCCTCTTTT+GGG - chr8_3:272837-272856 None:intergenic 40.0%
! TCCACCAGATTTTCCTCTTT+TGG - chr8_3:272838-272857 None:intergenic 40.0%
CCTCTATCTTGGTAAGTTTG+AGG - chr8_3:272876-272895 None:intergenic 40.0%
CCTCAAACTTACCAAGATAG+AGG + chr8_3:272873-272892 Msa1267930:intron 40.0%
TATGATCCTCCTATCACTGT+TGG - chr8_3:273014-273033 None:intergenic 40.0%
AGGAGGATCATATGCATTCA+TGG + chr8_3:273022-273041 Msa1267930:CDS 40.0%
GAGATACACAAACATGGAAG+AGG - chr8_3:273231-273250 None:intergenic 40.0%
TCATTGTGCTAAGAAACCTC+TGG - chr8_3:273253-273272 None:intergenic 40.0%
ATGCTACAATTAGTGCACCT+TGG - chr8_3:273283-273302 None:intergenic 40.0%
GGCTGAAAAATCTGCATGAA+AGG - chr8_3:273480-273499 None:intergenic 40.0%
!! ATTTTTCAGCCCACTTGGAA+TGG + chr8_3:273489-273508 Msa1267930:CDS 40.0%
TTACTGGAACCATTCCAAGT+GGG - chr8_3:273501-273520 None:intergenic 40.0%
ATTACTGGAACCATTCCAAG+TGG - chr8_3:273502-273521 None:intergenic 40.0%
ATTTGACAGAGGTTTCCCTA+TGG + chr8_3:273543-273562 Msa1267930:CDS 40.0%
GAATACAAGTACAAGTCACG+TGG - chr8_3:273587-273606 None:intergenic 40.0%
CTTGTTTGTAGTGTTCTCTC+AGG + chr8_3:273710-273729 Msa1267930:CDS 40.0%
AAAGCCTAGAGCAAGAAAGA+AGG + chr8_3:273853-273872 Msa1267930:intron 40.0%
AACATAGTTGTAGGACAGAC+AGG + chr8_3:274114-274133 Msa1267930:CDS 40.0%
ACATAGTTGTAGGACAGACA+GGG + chr8_3:274115-274134 Msa1267930:CDS 40.0%
TTCGACAACAACGATGCTAT+TGG - chr8_3:274173-274192 None:intergenic 40.0%
!! CATTGACTCTTGACACATGT+TGG + chr8_3:274235-274254 Msa1267930:intron 40.0%
TGTGTGTTACGTAAGCATAC+CGG - chr8_3:274406-274425 None:intergenic 40.0%
GTACACAGAAACTGTTGAAC+CGG - chr8_3:274607-274626 None:intergenic 40.0%
CATCTTGACAGAGAGAATGT+AGG + chr8_3:274694-274713 Msa1267930:intron 40.0%
! AGGGTTATTCAAGTTTCTGC+TGG + chr8_3:274748-274767 Msa1267930:CDS 40.0%
TCTTTGCAATGTTAGGTGAG+TGG + chr8_3:274782-274801 Msa1267930:intron 40.0%
ATGAGGAACCTCTTTATCAC+TGG + chr8_3:275124-275143 Msa1267930:CDS 40.0%
ATCATATCTCATCTCGTCTC+AGG + chr8_3:275274-275293 Msa1267930:intron 40.0%
TCATATCTCATCTCGTCTCA+GGG + chr8_3:275275-275294 Msa1267930:intron 40.0%
AAGAAGCGGTTGAGATTGAA+AGG - chr8_3:275663-275682 None:intergenic 40.0%
! TCTATGATGGAGGAAAGAAG+CGG - chr8_3:275677-275696 None:intergenic 40.0%
ACCTTTCCAATGCAGCAATT+GGG - chr8_3:275909-275928 None:intergenic 40.0%
AACCTTTCCAATGCAGCAAT+TGG - chr8_3:275910-275929 None:intergenic 40.0%
! TAAGTGTCACAGTAGTGGGA+AGG + chr8_3:271536-271555 Msa1267930:five_prime_UTR 45.0%
TGTGTTCAGAGAGATTAGCG+GGG - chr8_3:271594-271613 None:intergenic 45.0%
CATGCAAACATACCCCAAGA+TGG - chr8_3:271767-271786 None:intergenic 45.0%
ACCAGTCAGTTCAGTTCAAC+TGG + chr8_3:272152-272171 Msa1267930:intron 45.0%
ACCAGTTGAACTGAACTGAC+TGG - chr8_3:272156-272175 None:intergenic 45.0%
CCCAAAAGAGGAAAATCTGG+TGG + chr8_3:272834-272853 Msa1267930:intron 45.0%
GCAGGATGATAAAGTAAGGG+TGG + chr8_3:272923-272942 Msa1267930:intron 45.0%
! TGCAAACACTGTTTGGAACC+CGG + chr8_3:272985-273004 Msa1267930:CDS 45.0%
!! TCCTATCACTGTTGGTAACC+GGG - chr8_3:273006-273025 None:intergenic 45.0%
!! CTCCTATCACTGTTGGTAAC+CGG - chr8_3:273007-273026 None:intergenic 45.0%
! CCTCTGGAGATACACAAACA+TGG - chr8_3:273237-273256 None:intergenic 45.0%
CCATGTTTGTGTATCTCCAG+AGG + chr8_3:273234-273253 Msa1267930:intron 45.0%
!! TGCAGATTTTTCAGCCCACT+TGG + chr8_3:273484-273503 Msa1267930:intron 45.0%
ATGCTGTTCTGTCCTTTCTC+AGG + chr8_3:273650-273669 Msa1267930:intron 45.0%
TGTTCTGTCCTTTCTCAGGT+GGG + chr8_3:273654-273673 Msa1267930:intron 45.0%
GTGGGGACTTGTGTTGAAAT+TGG + chr8_3:273672-273691 Msa1267930:CDS 45.0%
TCCTCCTTCTTTCTTGCTCT+AGG - chr8_3:273860-273879 None:intergenic 45.0%
TGCATATGCCCATATCACTG+TGG - chr8_3:274045-274064 None:intergenic 45.0%
TATGTTGAGTTACATCCGGC+CGG - chr8_3:274100-274119 None:intergenic 45.0%
ATCTCATTTCTTCCGCTCCT+TGG + chr8_3:274141-274160 Msa1267930:CDS 45.0%
TATTGGTACCAACCAAGGAG+CGG - chr8_3:274156-274175 None:intergenic 45.0%
GATGCTATTGGTACCAACCA+AGG - chr8_3:274161-274180 None:intergenic 45.0%
AGATTCCATACCCTCTTGAG+TGG + chr8_3:274268-274287 Msa1267930:CDS 45.0%
GATTCCATACCCTCTTGAGT+GGG + chr8_3:274269-274288 Msa1267930:CDS 45.0%
ATTCCATACCCTCTTGAGTG+GGG + chr8_3:274270-274289 Msa1267930:CDS 45.0%
! TTTGATGCTGGCCACTCTTT+TGG + chr8_3:274303-274322 Msa1267930:CDS 45.0%
!!! TGGCCACTCTTTTGGAATGA+TGG + chr8_3:274311-274330 Msa1267930:CDS 45.0%
CAGCCATCATTCCAAAAGAG+TGG - chr8_3:274317-274336 None:intergenic 45.0%
AACCGGTTAGTGTTCCGAAA+AGG - chr8_3:274590-274609 None:intergenic 45.0%
AGAGAGAATGTAGGACTCCT+AGG + chr8_3:274703-274722 Msa1267930:intron 45.0%
!!! ACTGGTGTTGCCCTTTTCTT+AGG + chr8_3:275142-275161 Msa1267930:CDS 45.0%
TACACTATCAGGGCCTTTCA+TGG + chr8_3:275193-275212 Msa1267930:CDS 45.0%
TGCTCATACCAAAGCTGGAT+GGG + chr8_3:275219-275238 Msa1267930:CDS 45.0%
CATATCTCATCTCGTCTCAG+GGG + chr8_3:275276-275295 Msa1267930:intron 45.0%
AAGGACAGTGCCAAAGATAG+AGG + chr8_3:275570-275589 Msa1267930:CDS 45.0%
CCATGGCATTCCTCTATCTT+TGG - chr8_3:275583-275602 None:intergenic 45.0%
CCAAAGATAGAGGAATGCCA+TGG + chr8_3:275580-275599 Msa1267930:CDS 45.0%
AAGATAGAGGAATGCCATGG+TGG + chr8_3:275583-275602 Msa1267930:CDS 45.0%
AGATAGAGGAATGCCATGGT+GGG + chr8_3:275584-275603 Msa1267930:CDS 45.0%
! GTTCTAAACTTAGCCCACCA+TGG - chr8_3:275600-275619 None:intergenic 45.0%
TTTCCAATGCAGCAATTGGG+TGG - chr8_3:275906-275925 None:intergenic 45.0%
ACCCAATTGCTGCATTGGAA+AGG + chr8_3:275905-275924 Msa1267930:three_prime_UTR 45.0%
!! ACTGACTGGTTCGACTCGTT+CGG - chr8_3:272142-272161 None:intergenic 50.0%
ACCCGGTTACCAACAGTGAT+AGG + chr8_3:273002-273021 Msa1267930:CDS 50.0%
CGGTTACCAACAGTGATAGG+AGG + chr8_3:273005-273024 Msa1267930:CDS 50.0%
AGCACAATGAGAGCAGTCCA+AGG + chr8_3:273263-273282 Msa1267930:CDS 50.0%
CTGTTCTGTCCTTTCTCAGG+TGG + chr8_3:273653-273672 Msa1267930:intron 50.0%
GTTCTGTCCTTTCTCAGGTG+GGG + chr8_3:273655-273674 Msa1267930:intron 50.0%
GCCTAGAGCAAGAAAGAAGG+AGG + chr8_3:273856-273875 Msa1267930:intron 50.0%
GCACATCTATTGACAGCGAG+TGG + chr8_3:274062-274081 Msa1267930:CDS 50.0%
CGAGTGGAGCATACAAACAC+CGG + chr8_3:274078-274097 Msa1267930:CDS 50.0%
CATTTCTTCCGCTCCTTGGT+TGG + chr8_3:274145-274164 Msa1267930:intron 50.0%
CTCTTGACACATGTTGGTGC+AGG + chr8_3:274241-274260 Msa1267930:intron 50.0%
GGTGCTCCTACATTTGATGC+TGG + chr8_3:274291-274310 Msa1267930:CDS 50.0%
GAGTGGCCAGCATCAAATGT+AGG - chr8_3:274300-274319 None:intergenic 50.0%
! GGCCTTTTCGGAACACTAAC+CGG + chr8_3:274585-274604 Msa1267930:CDS 50.0%
GGGCAACACCAGTGATAAAG+AGG - chr8_3:275135-275154 None:intergenic 50.0%
GGTATGAGCAGGACCATGAA+AGG - chr8_3:275209-275228 None:intergenic 50.0%
! CATCCAGCTTTGGTATGAGC+AGG - chr8_3:275220-275239 None:intergenic 50.0%
CTGCTCATACCAAAGCTGGA+TGG + chr8_3:275218-275237 Msa1267930:CDS 50.0%
GAAACTCACCCATCCAGCTT+TGG - chr8_3:275230-275249 None:intergenic 50.0%
TGTCCACCCAATTGCTGCAT+TGG + chr8_3:275900-275919 Msa1267930:three_prime_UTR 50.0%
!! AGTGGTGGGTCTCCCAAAAG+AGG + chr8_3:272822-272841 Msa1267930:intron 55.0%
CACAAGTCCCCACCTGAGAA+AGG - chr8_3:273665-273684 None:intergenic 55.0%
TGGAGCATACAAACACCGGC+CGG + chr8_3:274082-274101 Msa1267930:CDS 55.0%
!! TAGGAGCACCCCACTCAAGA+GGG - chr8_3:274281-274300 None:intergenic 55.0%
CATGTCCTGAGCCGTGGTAT+CGG + chr8_3:274534-274553 Msa1267930:CDS 55.0%
TTCCCTGCCAACCGATACCA+CGG - chr8_3:274548-274567 None:intergenic 55.0%
!! GGTATCGGTTGGCAGGGAAT+TGG + chr8_3:274549-274568 Msa1267930:CDS 55.0%
CTCCTAGGAAGCAACCGTGT+TGG + chr8_3:274718-274737 Msa1267930:CDS 55.0%
TGCCAACACGGTTGCTTCCT+AGG - chr8_3:274723-274742 None:intergenic 55.0%
TAACCCTTCGGCTGCCAACA+CGG - chr8_3:274735-274754 None:intergenic 55.0%
GGTCCTGCTCATACCAAAGC+TGG + chr8_3:275214-275233 Msa1267930:CDS 55.0%
GCACCCCACTCAAGAGGGTA+TGG - chr8_3:274276-274295 None:intergenic 60.0%
!! GTAGGAGCACCCCACTCAAG+AGG - chr8_3:274282-274301 None:intergenic 60.0%
!! TCCTGAGCCGTGGTATCGGT+TGG + chr8_3:274538-274557 Msa1267930:CDS 60.0%
!! AGCCGTGGTATCGGTTGGCA+GGG + chr8_3:274543-274562 Msa1267930:CDS 60.0%
! CAACCGTGTTGGCAGCCGAA+GGG + chr8_3:274729-274748 Msa1267930:CDS 60.0%
GACATGAGCAGGCGGTGGTG+TGG - chr8_3:274520-274539 None:intergenic 65.0%
CTCAGGACATGAGCAGGCGG+TGG - chr8_3:274525-274544 None:intergenic 65.0%
CGGCTCAGGACATGAGCAGG+CGG - chr8_3:274528-274547 None:intergenic 65.0%
CCACGGCTCAGGACATGAGC+AGG - chr8_3:274531-274550 None:intergenic 65.0%
CCTGCTCATGTCCTGAGCCG+TGG + chr8_3:274528-274547 Msa1267930:CDS 65.0%
GCCAACCGATACCACGGCTC+AGG - chr8_3:274542-274561 None:intergenic 65.0%
!! GAGCCGTGGTATCGGTTGGC+AGG + chr8_3:274542-274561 Msa1267930:CDS 65.0%
! GCAACCGTGTTGGCAGCCGA+AGG + chr8_3:274728-274747 Msa1267930:CDS 65.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 271478 275978 271478 ID=Msa1267930;Name=Msa1267930
chr8_3 mRNA 271478 275978 271478 ID=Msa1267930-mRNA-1;Parent=Msa1267930;Name=Msa1267930-mRNA-1;_AED=0.17;_eAED=0.17;_QI=205|1|1|1|1|1|13|283|524
chr8_3 exon 271478 271773 271478 ID=Msa1267930-mRNA-1:exon:32;Parent=Msa1267930-mRNA-1
chr8_3 exon 271873 271970 271873 ID=Msa1267930-mRNA-1:exon:33;Parent=Msa1267930-mRNA-1
chr8_3 exon 272927 273103 272927 ID=Msa1267930-mRNA-1:exon:34;Parent=Msa1267930-mRNA-1
chr8_3 exon 273254 273354 273254 ID=Msa1267930-mRNA-1:exon:35;Parent=Msa1267930-mRNA-1
chr8_3 exon 273489 273564 273489 ID=Msa1267930-mRNA-1:exon:36;Parent=Msa1267930-mRNA-1
chr8_3 exon 273672 273731 273672 ID=Msa1267930-mRNA-1:exon:37;Parent=Msa1267930-mRNA-1
chr8_3 exon 273978 274162 273978 ID=Msa1267930-mRNA-1:exon:38;Parent=Msa1267930-mRNA-1
chr8_3 exon 274263 274359 274263 ID=Msa1267930-mRNA-1:exon:39;Parent=Msa1267930-mRNA-1
chr8_3 exon 274477 274622 274477 ID=Msa1267930-mRNA-1:exon:40;Parent=Msa1267930-mRNA-1
chr8_3 exon 274705 274796 274705 ID=Msa1267930-mRNA-1:exon:41;Parent=Msa1267930-mRNA-1
chr8_3 exon 274906 274983 274906 ID=Msa1267930-mRNA-1:exon:42;Parent=Msa1267930-mRNA-1
chr8_3 exon 275080 275240 275080 ID=Msa1267930-mRNA-1:exon:43;Parent=Msa1267930-mRNA-1
chr8_3 exon 275483 275978 275483 ID=Msa1267930-mRNA-1:exon:44;Parent=Msa1267930-mRNA-1
chr8_3 five_prime_UTR 271478 271682 271478 ID=Msa1267930-mRNA-1:five_prime_utr;Parent=Msa1267930-mRNA-1
chr8_3 CDS 271683 271773 271683 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 271873 271970 271873 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 272927 273103 272927 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 273254 273354 273254 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 273489 273564 273489 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 273672 273731 273672 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 273978 274162 273978 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 274263 274359 274263 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 274477 274622 274477 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 274705 274796 274705 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 274906 274983 274906 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 275080 275240 275080 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 CDS 275483 275695 275483 ID=Msa1267930-mRNA-1:cds;Parent=Msa1267930-mRNA-1
chr8_3 three_prime_UTR 275696 275978 275696 ID=Msa1267930-mRNA-1:three_prime_utr;Parent=Msa1267930-mRNA-1
Gene Sequence

>Msa1267930

ATGGCAGCTATAAAGCCAGAAGAGATAAGTCATTCACCAATGGATCAACTTCAGGGTTTAGAGTATTGTATAGATTCAAATCCATCTTGGGTGGAGACAATACTTCTTGGTTTTCAACATTATATTTTGGCATTAGGAACTGCAGTTATGATTCCTTCATTTCTTGTTCCTTCAATGGGTGGAAATGATGATGATAAAGTAAGGGTGGTACAAACTCTACTTTTTGTTGAAGGAATTAATACACTTTTGCAAACACTGTTTGGAACCCGGTTACCAACAGTGATAGGAGGATCATATGCATTCATGGTCCCCATTGTATCCATTATTCGTGACCCTTCTTTTGCAATGATAGATGACCCACAATTGAGGTTTCTTAGCACAATGAGAGCAGTCCAAGGTGCACTAATTGTAGCATCCAGCATACAAATTATTTTGGGATTTAGTCAAATATGGGCTATTTGTTCTAGATTTTTCAGCCCACTTGGAATGGTTCCAGTAATTACATTAGTTGGTTTTGGATTATTTGACAGAGGTTTCCCTATGGTGGGGACTTGTGTTGAAATTGGAATTCCCATGCTAATCTTGTTTGTAGTGTTCTCTCAGTACTTGAAAAATTTTCAGACAAGACAAGTACCGATACTAGAGAGATTTGCTCTACTCATAACAACCACAGTGATATGGGCATATGCACATCTATTGACAGCGAGTGGAGCATACAAACACCGGCCGGATGTAACTCAACATAGTTGTAGGACAGACAGGGCTAATCTCATTTCTTCCGCTCCTTGGATAAAGATTCCATACCCTCTTGAGTGGGGTGCTCCTACATTTGATGCTGGCCACTCTTTTGGAATGATGGCTGCTGTTTTAGTCTCATTAGTTGAGTCAACTGGAGCATTCAAAGCTGCATCGCGTCTAGCAAGTGCCACACCACCGCCTGCTCATGTCCTGAGCCGTGGTATCGGTTGGCAGGGAATTGGAATTTTGCTGAATGGCCTTTTCGGAACACTAACCGGTTCAACAGTTTCTGTAGAGAATGTAGGACTCCTAGGAAGCAACCGTGTTGGCAGCCGAAGGGTTATTCAAGTTTCTGCTGGATTTATGATATTCTTTGCAATGTTAGGTAAATTTGGAGCTTTATTTGCATCAATACCATTCCCTATTTTTGCTGCTATATACTGTGTTTTGTTTGGTCTTGTAGCTTCTGTAGGGCTATCATTTTTGCAATTCACCAACATGAATTCAATGAGGAACCTCTTTATCACTGGTGTTGCCCTTTTCTTAGGCTTGTCTATTCCTGAATATTTCAGAGAATACACTATCAGGGCCTTTCATGGTCCTGCTCATACCAAAGCTGGATGGTTCAATGACTTCCTGAATACCATCTTCTATTCTTCACCAACTGTTGCATTGATTATTGCTGTGTTCTTGGACAATACTCTTGACTATAAGGACAGTGCCAAAGATAGAGGAATGCCATGGTGGGCTAAGTTTAGAACATTTAAAGCAGATAGCAGAAATGAAGAGTTCTACTCTCTTCCTTTCAATCTCAACCGCTTCTTTCCTCCATCATAG

Protein sequence

>Msa1267930

MAAIKPEEISHSPMDQLQGLEYCIDSNPSWVETILLGFQHYILALGTAVMIPSFLVPSMGGNDDDKVRVVQTLLFVEGINTLLQTLFGTRLPTVIGGSYAFMVPIVSIIRDPSFAMIDDPQLRFLSTMRAVQGALIVASSIQIILGFSQIWAICSRFFSPLGMVPVITLVGFGLFDRGFPMVGTCVEIGIPMLILFVVFSQYLKNFQTRQVPILERFALLITTTVIWAYAHLLTASGAYKHRPDVTQHSCRTDRANLISSAPWIKIPYPLEWGAPTFDAGHSFGMMAAVLVSLVESTGAFKAASRLASATPPPAHVLSRGIGWQGIGILLNGLFGTLTGSTVSVENVGLLGSNRVGSRRVIQVSAGFMIFFAMLGKFGALFASIPFPIFAAIYCVLFGLVASVGLSFLQFTNMNSMRNLFITGVALFLGLSIPEYFREYTIRAFHGPAHTKAGWFNDFLNTIFYSSPTVALIIAVFLDNTLDYKDSAKDRGMPWWAKFRTFKADSRNEEFYSLPFNLNRFFPPS*