AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1308860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308860 MtrunA17_Chr8g0335351 99.222 771 6 0 1 771 1 771 0.0 1582
Msa1308860 MtrunA17_Chr7g0250631 77.749 773 158 7 1 771 1 761 0.0 1191
Msa1308860 MtrunA17_Chr2g0290691 69.048 504 134 6 276 771 115 604 0.0 699
Msa1308860 MtrunA17_Chr7g0227331 65.121 496 134 8 288 771 150 618 0.0 619
Msa1308860 MtrunA17_Chr6g0449401 58.969 524 152 7 287 771 180 679 0.0 608
Msa1308860 MtrunA17_Chr1g0179101 63.744 422 143 5 312 727 410 827 0.0 555
Msa1308860 MtrunA17_Chr7g0266031 58.584 466 179 7 265 721 383 843 0.0 553
Msa1308860 MtrunA17_Chr2g0309421 59.915 469 157 8 316 771 121 571 0.0 546
Msa1308860 MtrunA17_Chr8g0356291 59.770 435 156 6 345 771 101 524 5.16e-179 523
Msa1308860 MtrunA17_Chr3g0080101 63.706 394 130 5 338 722 380 769 2.95e-175 523
Msa1308860 MtrunA17_Chr4g0063311 55.750 400 154 6 341 721 62 457 3.49e-147 440
Msa1308860 MtrunA17_Chr2g0285711 48.090 445 185 8 302 721 2 425 1.58e-127 388
Msa1308860 MtrunA17_Chr2g0321101 52.604 384 147 5 350 714 67 434 2.38e-127 388
Msa1308860 MtrunA17_Chr8g0381091 49.487 390 166 6 345 721 52 423 2.12e-123 377
Msa1308860 MtrunA17_Chr2g0312641 46.763 417 175 11 317 720 37 419 6.03e-112 348
Msa1308860 MtrunA17_Chr8g0369091 46.457 381 159 4 345 725 572 907 4.89e-109 354
Msa1308860 MtrunA17_Chr4g0030361 43.133 415 181 4 317 724 247 613 7.37e-108 343
Msa1308860 MtrunA17_Chr2g0327561 44.769 411 189 4 333 742 588 961 2.20e-102 337
Msa1308860 MtrunA17_Chr8g0338741 39.005 382 183 12 367 727 15 367 2.21e-75 250
Msa1308860 MtrunA17_Chr4g0032761 39.678 373 194 10 367 721 10 369 6.40e-72 241
Msa1308860 MtrunA17_Chr2g0329011 39.216 357 180 7 367 721 12 333 6.72e-71 237
Msa1308860 MtrunA17_Chr7g0234641 35.792 366 205 8 367 722 8 353 7.82e-66 225
Msa1308860 MtrunA17_Chr5g0428981 35.693 339 172 6 372 709 763 1056 5.42e-54 202
Msa1308860 MtrunA17_Chr4g0018201 35.398 339 173 6 372 709 759 1052 9.60e-54 201
Msa1308860 MtrunA17_Chr6g0478601 34.463 354 187 6 369 721 108 417 2.52e-52 190
Msa1308860 MtrunA17_Chr3g0135951 33.983 359 194 11 360 709 82 406 9.19e-51 186
Msa1308860 MtrunA17_Chr1g0153321 32.432 407 226 11 360 757 96 462 1.10e-50 186
Msa1308860 MtrunA17_Chr1g0187581 32.345 371 201 9 360 720 105 435 1.10e-48 180
Msa1308860 MtrunA17_Chr1g0183651 31.892 370 203 10 360 720 108 437 1.56e-47 177
Msa1308860 MtrunA17_Chr7g0261491 33.240 358 193 10 360 709 108 427 1.23e-46 175
Msa1308860 MtrunA17_Chr1g0167351 32.853 347 193 8 367 709 105 415 1.86e-45 171
Msa1308860 MtrunA17_Chr2g0299781 31.034 377 211 9 360 724 101 440 8.78e-44 166
Msa1308860 MtrunA17_Chr1g0167311 30.670 388 217 11 367 739 110 460 3.65e-43 164
Msa1308860 MtrunA17_Chr7g0245031 39.869 153 90 1 367 519 143 293 3.51e-27 115
Msa1308860 MtrunA17_Chr7g0245031 44.248 113 60 2 598 709 299 409 3.46e-20 94.7
Msa1308860 MtrunA17_Chr1g0197721 35.323 201 114 5 369 563 48 238 6.11e-26 112
Msa1308860 MtrunA17_Chr1g0197721 32.836 134 84 3 591 720 203 334 8.86e-12 68.2
Msa1308860 MtrunA17_Chr4g0059751 37.037 162 89 3 367 519 84 241 5.01e-25 108
Msa1308860 MtrunA17_Chr4g0059751 38.596 114 67 2 598 710 247 358 1.45e-20 95.1
Msa1308860 MtrunA17_Chr2g0286501 27.019 322 158 7 369 689 46 291 5.01e-20 95.9
Msa1308860 MtrunA17_Chr3g0140631 34.868 152 97 1 369 520 34 183 3.46e-19 89.0
Msa1308860 MtrunA17_Chr3g0140631 34.259 108 67 1 597 704 185 288 6.75e-14 73.2
Msa1308860 MtrunA17_Chr8g0351491 25.364 343 175 9 363 705 7 268 5.64e-19 87.8
Msa1308860 MtrunA17_Chr3g0125381 38.393 112 65 1 594 705 100 207 5.83e-19 86.3
Msa1308860 MtrunA17_Chr4g0001331 24.405 336 176 8 369 704 17 274 7.68e-18 87.0
Msa1308860 MtrunA17_Chr4g0013131 33.121 157 102 1 363 519 3 156 9.05e-18 87.0
Msa1308860 MtrunA17_Chr3g0107011 31.126 151 101 1 369 519 11 158 2.94e-16 82.4
Msa1308860 MtrunA17_Chr2g0302431 31.313 198 115 5 359 537 7 202 3.00e-16 82.4
Msa1308860 MtrunA17_Chr8g0353621 33.333 150 98 1 372 521 10 157 5.21e-16 79.0
Msa1308860 MtrunA17_Chr8g0353621 38.614 101 58 1 603 703 164 260 2.25e-14 74.3
Msa1308860 MtrunA17_Chr3g0114511 33.333 156 99 2 364 519 24 174 9.54e-16 80.5
Msa1308860 MtrunA17_Chr4g0008561 24.595 370 187 14 376 736 23 309 1.09e-15 81.3
Msa1308860 MtrunA17_Chr1g0205421 34.177 158 97 3 363 518 3 155 1.33e-15 80.1
Msa1308860 MtrunA17_Chr7g0272841 33.742 163 99 5 372 528 68 227 1.43e-15 80.9
Msa1308860 MtrunA17_Chr2g0284031 32.680 153 100 1 367 519 26 175 2.24e-15 79.7
Msa1308860 MtrunA17_Chr5g0432471 29.801 151 103 2 369 519 9 156 3.03e-15 79.3
Msa1308860 MtrunA17_Chr1g0150321 26.269 335 167 11 372 705 13 268 3.05e-15 79.0
Msa1308860 MtrunA17_Chr8g0379091 30.159 189 115 3 367 553 21 194 4.29e-15 79.0
Msa1308860 MtrunA17_Chr2g0304111 30.387 181 119 3 372 552 23 196 6.60e-15 78.2
Msa1308860 MtrunA17_Chr1g0200601 34.756 164 95 5 361 520 25 180 7.63e-15 78.2
Msa1308860 MtrunA17_Chr4g0025671 28.289 152 107 2 369 519 5 155 8.78e-15 79.0
Msa1308860 MtrunA17_Chr1g0202831 33.540 161 93 5 370 523 409 562 1.02e-14 78.6
Msa1308860 MtrunA17_Chr1g0188031 32.026 153 100 3 369 519 17 167 1.05e-14 77.4
Msa1308860 MtrunA17_Chr7g0244521 30.968 155 104 2 365 519 5 156 1.18e-14 77.4
Msa1308860 MtrunA17_Chr5g0432491 33.784 148 96 2 372 519 23 168 1.35e-14 77.0
Msa1308860 MtrunA17_Chr2g0321841 27.632 152 108 2 369 519 1 151 1.50e-14 78.2
Msa1308860 MtrunA17_Chr3g0107051 31.757 148 98 1 372 519 21 165 1.54e-14 76.6
Msa1308860 MtrunA17_Chr5g0428031 28.415 183 112 5 372 537 9 189 1.65e-14 76.6
Msa1308860 MtrunA17_Chr1g0190831 28.289 152 107 2 369 519 1 151 2.93e-14 76.6
Msa1308860 MtrunA17_Chr4g0074811 37.662 154 88 6 372 520 91 241 3.24e-14 76.3
Msa1308860 MtrunA17_Chr8g0346071 28.994 169 118 2 372 540 17 183 3.73e-14 75.5
Msa1308860 MtrunA17_Chr6g0486661 33.333 126 76 4 600 720 912 1034 6.50e-14 75.9
Msa1308860 MtrunA17_Chr1g0190131 30.968 155 89 4 370 516 7 151 1.53e-13 71.6
Msa1308860 MtrunA17_Chr8g0385341 33.333 153 96 4 372 520 30 180 1.64e-13 73.9
Msa1308860 MtrunA17_Chr1g0173921 27.632 152 108 2 369 519 1 151 1.65e-13 74.7
Msa1308860 MtrunA17_Chr1g0185221 28.289 152 107 2 369 519 1 151 1.96e-13 73.9
Msa1308860 MtrunA17_Chr2g0284011 31.414 191 105 7 365 534 5 190 2.50e-13 73.2
Msa1308860 MtrunA17_Chr5g0419441 28.571 154 107 2 370 523 237 387 3.31e-13 73.6
Msa1308860 MtrunA17_Chr6g0453681 29.801 151 104 1 369 519 16 164 4.24e-13 72.4
Msa1308860 MtrunA17_Chr3g0132591 36.025 161 92 4 378 537 118 268 4.26e-13 72.4
Msa1308860 MtrunA17_Chr4g0074111 29.605 152 101 2 372 523 18 163 4.33e-13 72.0
Msa1308860 MtrunA17_Chr8g0386981 32.639 144 93 2 378 519 414 555 4.72e-13 73.2
Msa1308860 MtrunA17_Chr7g0260191 27.922 154 105 3 369 519 1 151 5.03e-13 72.8
Msa1308860 MtrunA17_Chr8g0346081 26.506 166 120 1 372 537 17 180 5.32e-13 72.0
Msa1308860 MtrunA17_Chr6g0468751 29.801 151 104 1 369 519 16 164 5.66e-13 72.0
Msa1308860 MtrunA17_Chr5g0444171 32.370 173 108 5 352 520 75 242 9.58e-13 71.6
Msa1308860 MtrunA17_Chr7g0258051 26.144 153 113 0 369 521 13 165 1.19e-12 71.6
Msa1308860 MtrunA17_Chr4g0000431 28.723 188 121 5 367 553 19 194 1.32e-12 71.2
Msa1308860 MtrunA17_Chr7g0274941 30.263 152 101 3 367 516 11 159 1.37e-12 69.3
Msa1308860 MtrunA17_Chr1g0203881 32.237 152 97 3 372 519 41 190 1.65e-12 70.9
Msa1308860 MtrunA17_Chr3g0091311 31.410 156 104 2 364 519 4 156 2.00e-12 68.2
Msa1308860 MtrunA17_Chr5g0448721 32.680 153 97 4 372 520 96 246 2.14e-12 70.5
Msa1308860 MtrunA17_Chr1g0176421 33.121 157 101 4 372 526 161 315 2.14e-12 70.5
Msa1308860 MtrunA17_Chr4g0063881 29.167 144 100 1 376 519 15 156 3.37e-12 69.3
Msa1308860 MtrunA17_Chr2g0317001 26.230 183 124 3 370 552 13 184 4.60e-12 69.7
Msa1308860 MtrunA17_Chr3g0091281 31.395 172 106 5 364 528 4 170 4.72e-12 66.6
Msa1308860 MtrunA17_Chr5g0441011 29.375 160 106 3 360 519 6 158 5.04e-12 68.9
Msa1308860 MtrunA17_Chr1g0173541 31.034 174 116 4 355 526 35 206 5.36e-12 68.9
Msa1308860 MtrunA17_Chr4g0047191 34.653 101 66 0 419 519 94 194 5.85e-12 68.2
Msa1308860 MtrunA17_Chr4g0047211 34.653 101 66 0 419 519 89 189 6.58e-12 67.8
Msa1308860 MtrunA17_Chr1g0188991 27.604 192 124 5 372 562 15 192 7.23e-12 68.9
Msa1308860 MtrunA17_Chr1g0170281 32.026 153 98 4 372 520 118 268 7.58e-12 68.9
Msa1308860 MtrunA17_Chr8g0345801 32.558 129 84 2 377 505 20 145 7.67e-12 66.6
Msa1308860 MtrunA17_Chr5g0441691 32.026 153 98 5 372 520 68 218 7.84e-12 68.6
Msa1308860 MtrunA17_Chr8g0384301 29.825 171 113 5 369 536 296 462 9.55e-12 68.6
Msa1308860 MtrunA17_Chr7g0257751 32.258 155 99 4 370 520 56 208 1.42e-11 67.8
Msa1308860 MtrunA17_Chr8g0388891 24.904 261 174 9 265 519 37 281 1.86e-11 66.6
Msa1308860 MtrunA17_Chr3g0098951 31.765 170 107 6 355 520 70 234 1.89e-11 67.4
Msa1308860 MtrunA17_Chr3g0130151 31.507 146 96 2 376 519 248 391 1.89e-11 67.8
Msa1308860 MtrunA17_Chr1g0166101 29.605 152 104 2 369 519 21 170 1.99e-11 67.0
Msa1308860 MtrunA17_Chr7g0267751 31.818 154 97 4 372 520 135 285 2.38e-11 67.4
Msa1308860 MtrunA17_Chr4g0059951 33.333 153 96 4 372 520 73 223 2.59e-11 67.0
Msa1308860 MtrunA17_Chr7g0256001 29.843 191 118 6 369 552 138 319 2.95e-11 67.0
Msa1308860 MtrunA17_Chr2g0276831 32.927 164 95 6 365 521 3 158 3.14e-11 65.9
Msa1308860 MtrunA17_Chr5g0405421 29.605 152 103 2 372 519 99 250 3.89e-11 66.6
Msa1308860 MtrunA17_Chr1g0170551 33.019 106 65 2 603 708 162 261 4.09e-11 67.0
Msa1308860 MtrunA17_Chr4g0038501 25.806 186 130 2 372 557 20 197 8.51e-11 65.9
Msa1308860 MtrunA17_Chr2g0333821 30.464 151 102 2 369 519 11 158 8.82e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1308860 AT2G44830.2 65.234 791 226 21 1 771 4 765 0.0 946
Msa1308860 AT2G44830.3 65.234 791 226 21 1 771 4 765 0.0 946
Msa1308860 AT2G44830.1 65.234 791 226 21 1 771 4 765 0.0 946
Msa1308860 AT5G47750.1 67.054 516 146 6 266 771 85 586 0.0 685
Msa1308860 AT4G26610.1 72.066 426 115 3 305 727 55 479 0.0 640
Msa1308860 AT5G55910.2 68.615 462 125 7 315 771 52 498 0.0 625
Msa1308860 AT5G55910.1 68.615 462 125 7 315 771 52 498 0.0 625
Msa1308860 AT5G40030.1 63.170 448 140 9 331 771 70 499 0.0 570
Msa1308860 AT3G27580.2 60.677 473 165 7 309 771 117 578 0.0 554
Msa1308860 AT3G27580.1 60.677 473 165 7 309 771 117 578 0.0 554
Msa1308860 AT1G79250.1 69.509 387 110 5 344 725 118 501 0.0 549
Msa1308860 AT1G79250.3 69.509 387 110 5 344 725 118 501 0.0 549
Msa1308860 AT1G79250.2 69.509 387 110 5 344 725 118 501 0.0 549
Msa1308860 AT1G79250.4 69.509 387 110 5 344 725 118 501 0.0 549
Msa1308860 AT3G12690.1 60.440 455 146 6 332 771 142 577 0.0 542
Msa1308860 AT3G12690.3 60.440 455 146 6 332 771 142 577 0.0 542
Msa1308860 AT3G12690.2 60.440 455 146 6 332 771 142 577 0.0 542
Msa1308860 AT3G52890.2 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1308860 AT3G52890.4 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1308860 AT3G52890.1 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1308860 AT3G52890.3 58.333 468 167 8 316 771 483 934 3.62e-180 540
Msa1308860 AT1G16440.1 61.048 439 134 7 345 771 86 499 1.94e-179 523
Msa1308860 AT2G36350.1 59.819 443 141 9 343 771 530 949 6.64e-177 532
Msa1308860 AT5G03640.2 59.674 429 143 7 310 721 480 895 1.39e-172 521
Msa1308860 AT5G03640.1 59.674 429 143 7 310 721 480 895 1.39e-172 521
Msa1308860 AT2G26700.1 46.091 486 206 10 290 722 1 483 7.33e-133 404
Msa1308860 AT2G34650.1 52.284 394 153 9 345 728 50 418 5.00e-129 392
Msa1308860 AT3G44610.1 52.973 370 132 6 372 715 71 424 6.24e-126 384
Msa1308860 AT5G58140.6 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1308860 AT5G58140.7 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1308860 AT5G58140.5 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1308860 AT5G58140.2 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1308860 AT5G58140.1 45.855 386 161 4 346 728 551 891 1.67e-107 350
Msa1308860 AT3G14370.1 46.194 381 173 6 347 722 61 414 2.31e-107 337
Msa1308860 AT5G58140.3 46.631 371 153 3 346 716 551 876 1.01e-105 345
Msa1308860 AT3G45780.2 45.926 405 175 5 321 724 611 972 4.47e-104 342
Msa1308860 AT3G45780.1 45.926 405 175 5 321 724 611 972 4.47e-104 342
Msa1308860 AT1G53700.1 44.675 385 168 7 347 720 66 416 2.25e-101 321
Msa1308860 AT1G51170.1 39.782 367 184 9 367 721 17 358 4.64e-73 244
Msa1308860 AT3G20830.1 40.054 367 187 10 366 721 15 359 5.27e-69 233
Msa1308860 AT4G13000.1 37.119 361 190 8 367 723 15 342 4.29e-68 229
Msa1308860 AT3G25250.1 37.398 369 188 9 367 723 12 349 1.20e-67 230
Msa1308860 AT1G45160.2 35.989 364 181 7 362 723 661 974 8.07e-55 205
Msa1308860 AT1G45160.1 35.989 364 181 7 362 723 661 974 1.78e-54 204
Msa1308860 AT1G30640.2 33.604 369 204 9 360 722 108 441 4.46e-51 188
Msa1308860 AT1G30640.1 33.604 369 204 9 360 722 108 441 4.46e-51 188
Msa1308860 AT1G48490.4 36.467 351 171 11 360 709 818 1117 5.44e-51 193
Msa1308860 AT1G48490.3 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1308860 AT1G48490.2 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1308860 AT1G48490.1 36.467 351 171 11 360 709 817 1116 5.58e-51 193
Msa1308860 AT1G30640.3 33.604 369 204 9 360 722 15 348 6.36e-51 185
Msa1308860 AT5G62310.1 34.795 342 178 7 369 709 751 1048 4.33e-50 191
Msa1308860 AT3G17850.1 34.795 342 178 6 369 709 879 1176 2.23e-49 189
Msa1308860 AT5G09890.2 32.955 352 202 6 360 709 90 409 3.74e-49 181
Msa1308860 AT5G09890.1 32.955 352 202 6 360 709 90 409 4.01e-49 181
Msa1308860 AT4G33080.2 33.053 357 201 9 360 709 82 407 6.70e-49 181
Msa1308860 AT4G33080.1 33.053 357 201 9 360 709 82 407 7.82e-49 181
Msa1308860 AT1G03920.2 33.613 357 195 9 360 712 12 330 1.22e-47 176
Msa1308860 AT2G20470.3 32.493 357 198 8 360 712 112 429 1.89e-47 177
Msa1308860 AT2G20470.2 32.493 357 198 8 360 712 112 429 3.45e-47 177
Msa1308860 AT2G20470.1 32.493 357 198 8 360 712 112 429 3.45e-47 177
Msa1308860 AT1G03920.1 33.613 357 195 9 360 712 125 443 4.06e-47 177
Msa1308860 AT1G03920.3 33.613 357 195 9 360 712 125 443 4.06e-47 177
Msa1308860 AT4G14350.2 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1308860 AT4G14350.1 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1308860 AT4G14350.4 31.667 360 205 9 367 722 114 436 2.11e-44 169
Msa1308860 AT4G14350.3 31.667 360 205 9 367 722 114 436 2.22e-44 168
Msa1308860 AT3G23310.1 31.805 349 195 9 367 709 115 426 6.86e-44 167
Msa1308860 AT2G19400.1 32.213 357 203 11 361 709 94 419 3.29e-39 153
Msa1308860 AT5G58140.4 48.092 131 68 0 346 476 551 681 2.00e-32 134
Msa1308860 AT3G08720.1 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1308860 AT3G08720.1 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1308860 AT3G08720.3 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1308860 AT3G08720.3 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1308860 AT3G08720.4 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1308860 AT3G08720.4 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1308860 AT3G08720.2 39.355 155 92 1 365 519 133 285 8.43e-28 118
Msa1308860 AT3G08720.2 46.847 111 55 3 600 709 293 400 2.18e-23 104
Msa1308860 AT3G08730.1 38.710 155 93 1 365 519 127 279 3.54e-27 116
Msa1308860 AT3G08730.1 44.531 128 62 4 599 720 286 410 2.70e-24 107
Msa1308860 AT3G08730.2 38.710 155 93 1 365 519 127 279 3.54e-27 116
Msa1308860 AT3G08730.2 44.531 128 62 4 599 720 286 410 2.70e-24 107
Msa1308860 AT5G04510.2 33.503 197 117 3 372 563 44 231 1.03e-24 107
Msa1308860 AT5G04510.2 34.483 145 88 4 591 730 196 338 3.70e-18 88.2
Msa1308860 AT5G04510.1 33.503 197 117 3 372 563 44 231 1.13e-24 108
Msa1308860 AT5G04510.1 34.483 145 88 4 591 730 196 338 4.30e-18 88.6
Msa1308860 AT5G04510.3 37.931 145 88 1 372 516 44 186 2.36e-24 104
Msa1308860 AT3G10540.1 32.995 197 118 3 372 563 45 232 5.42e-24 107
Msa1308860 AT3G10540.1 33.333 165 99 5 591 750 197 355 9.25e-19 90.9
Msa1308860 AT5G18700.1 39.073 151 84 3 369 519 1 143 8.94e-22 102
Msa1308860 AT2G20050.1 38.655 119 67 4 597 712 931 1046 5.95e-18 89.4
Msa1308860 AT2G20050.2 38.655 119 67 4 597 712 928 1043 6.31e-18 89.4
Msa1308860 AT2G25880.1 35.762 151 95 1 370 520 23 171 1.20e-17 84.7
Msa1308860 AT2G25880.1 36.111 108 65 1 597 704 173 276 1.30e-14 75.5
Msa1308860 AT4G32830.1 34.868 152 97 1 369 520 28 177 2.35e-17 84.0
Msa1308860 AT4G32830.1 36.111 108 65 1 597 704 179 282 4.25e-14 74.3
Msa1308860 AT2G25880.4 35.762 151 95 1 370 520 36 184 2.79e-17 84.0
Msa1308860 AT2G25880.4 36.111 108 65 1 597 704 186 289 1.59e-14 75.5
Msa1308860 AT2G45490.1 32.258 155 103 2 369 523 19 171 3.12e-17 83.6
Msa1308860 AT2G45490.1 37.037 108 64 1 597 704 170 273 5.21e-17 82.8
Msa1308860 AT2G45490.2 32.258 155 103 2 369 523 19 171 4.07e-17 82.4
Msa1308860 AT2G45490.2 35.294 85 55 0 597 681 170 254 3.12e-11 65.1
Msa1308860 AT5G57630.2 32.461 191 103 7 365 534 2 187 4.49e-17 84.7
Msa1308860 AT5G57630.1 32.461 191 103 7 365 534 2 187 4.98e-17 84.7
Msa1308860 AT5G45820.1 33.121 157 102 2 363 519 3 156 5.40e-17 84.7
Msa1308860 AT2G25880.3 35.762 151 95 1 370 520 84 232 5.62e-17 83.6
Msa1308860 AT2G25880.3 36.449 107 64 1 597 703 234 336 3.41e-14 75.1
Msa1308860 AT1G35670.1 36.585 164 92 5 361 520 21 176 1.24e-16 84.0
Msa1308860 AT3G04810.2 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1308860 AT3G04810.1 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1308860 AT3G04810.3 28.947 152 106 2 369 519 1 151 2.73e-16 83.6
Msa1308860 AT1G12680.1 34.356 163 96 4 376 537 111 263 3.43e-16 82.4
Msa1308860 AT4G18700.1 32.680 153 100 1 367 519 21 170 5.37e-16 82.0
Msa1308860 AT4G24400.1 31.757 148 99 1 372 519 9 154 6.01e-16 81.6
Msa1308860 AT1G29230.1 32.642 193 112 5 363 553 66 242 6.72e-16 82.0
Msa1308860 AT4G24400.2 31.757 148 99 1 372 519 9 154 6.79e-16 81.3
Msa1308860 AT5G28290.1 29.605 152 105 2 369 519 1 151 1.19e-15 81.3
Msa1308860 AT5G28290.2 29.605 152 105 2 369 519 1 151 1.19e-15 81.3
Msa1308860 AT5G28290.3 29.605 152 105 2 369 519 1 151 1.26e-15 81.3
Msa1308860 AT5G45810.1 31.373 153 102 1 367 519 23 172 2.13e-15 80.1
Msa1308860 AT1G54510.4 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1308860 AT1G54510.2 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1308860 AT1G54510.1 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1308860 AT1G54510.3 29.870 154 102 3 369 519 1 151 2.30e-15 80.5
Msa1308860 AT5G25110.1 31.788 151 100 2 369 519 40 187 5.57e-15 79.0
Msa1308860 AT3G06030.1 32.240 183 105 6 352 528 58 227 5.69e-15 79.3
Msa1308860 AT4G14580.1 24.242 330 174 8 365 692 14 269 6.12e-15 78.2
Msa1308860 AT3G44200.2 28.947 152 106 2 369 519 5 155 6.20e-15 79.7
Msa1308860 AT3G44200.1 28.947 152 106 2 369 519 5 155 6.20e-15 79.7
Msa1308860 AT2G25880.2 36.111 108 65 1 597 704 141 244 7.67e-15 75.9
Msa1308860 AT2G34180.1 31.875 160 106 1 361 520 46 202 8.25e-15 78.6
Msa1308860 AT3G63280.2 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1308860 AT3G63280.3 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1308860 AT3G63280.1 28.947 152 106 2 369 519 1 151 9.62e-15 78.6
Msa1308860 AT4G09570.1 35.366 164 94 5 361 520 20 175 9.97e-15 78.2
Msa1308860 AT3G01090.3 31.126 151 102 1 369 519 16 164 1.21e-14 77.8
Msa1308860 AT3G01090.1 31.126 151 102 1 369 519 16 164 1.21e-14 77.8
Msa1308860 AT2G30360.1 32.704 159 98 4 364 519 15 167 1.37e-14 77.4
Msa1308860 AT5G10930.1 35.762 151 89 6 372 519 12 157 1.42e-14 77.4
Msa1308860 AT3G01090.2 31.126 151 102 1 369 519 39 187 1.50e-14 77.8
Msa1308860 AT3G63280.4 28.387 155 109 2 366 519 52 205 1.68e-14 77.8
Msa1308860 AT2G25090.1 31.606 193 124 6 363 553 6 192 2.66e-14 76.6
Msa1308860 AT3G29160.3 31.788 151 101 2 369 519 17 165 2.79e-14 75.5
Msa1308860 AT5G01810.1 34.591 159 97 4 363 519 3 156 3.83e-14 75.9
Msa1308860 AT5G01810.2 34.591 159 97 4 363 519 3 156 3.83e-14 75.9
Msa1308860 AT3G29160.1 31.788 151 101 2 369 519 17 165 4.16e-14 76.3
Msa1308860 AT3G29160.2 31.788 151 101 2 369 519 17 165 4.16e-14 76.3
Msa1308860 AT1G53570.7 29.825 171 115 3 368 536 210 377 4.47e-14 76.3
Msa1308860 AT5G21326.1 25.155 322 164 11 372 691 13 259 4.51e-14 75.9
Msa1308860 AT5G01810.3 34.591 159 97 4 363 519 3 156 4.59e-14 75.1
Msa1308860 AT1G53570.6 29.825 171 115 3 368 536 210 377 5.17e-14 75.9
Msa1308860 AT1G53570.1 29.825 171 115 3 368 536 210 377 6.15e-14 75.9
Msa1308860 AT1G53570.2 29.825 171 115 3 368 536 210 377 6.30e-14 75.9
Msa1308860 AT1G53570.3 29.825 171 115 3 368 536 210 377 6.30e-14 75.9
Msa1308860 AT1G09000.1 29.448 163 108 3 372 529 69 229 6.35e-14 75.9
Msa1308860 AT1G53570.4 29.825 171 115 3 368 536 210 377 6.41e-14 75.9
Msa1308860 AT1G09000.2 29.448 163 108 3 372 529 69 229 6.71e-14 75.9
Msa1308860 AT1G54960.1 29.012 162 108 3 372 528 68 227 7.03e-14 75.9
Msa1308860 AT1G54960.2 29.012 162 108 3 372 528 68 227 7.03e-14 75.9
Msa1308860 AT3G17510.1 31.788 151 101 2 369 519 17 165 7.99e-14 75.1
Msa1308860 AT4G04720.2 32.370 173 105 4 358 520 60 230 1.00e-13 75.1
Msa1308860 AT4G04720.1 32.370 173 105 4 358 520 60 230 1.00e-13 75.1
Msa1308860 AT1G30270.1 29.012 162 109 2 369 530 28 183 1.76e-13 73.9
Msa1308860 AT2G26980.1 30.405 148 101 2 372 519 14 159 2.07e-13 73.2
Msa1308860 AT2G26980.3 30.405 148 101 2 372 519 14 159 2.51e-13 73.6
Msa1308860 AT1G30270.2 29.012 162 109 2 369 530 28 183 2.56e-13 73.6
Msa1308860 AT2G26980.4 30.405 148 101 2 372 519 24 169 2.69e-13 73.6
Msa1308860 AT3G10660.2 33.987 153 95 4 372 520 186 336 2.78e-13 73.9
Msa1308860 AT3G10660.1 33.987 153 95 4 372 520 186 336 2.78e-13 73.9
Msa1308860 AT5G39440.1 32.450 151 100 2 369 519 16 164 2.79e-13 73.6
Msa1308860 AT1G69220.1 29.870 154 105 2 370 523 247 397 3.11e-13 73.9
Msa1308860 AT3G20860.1 27.815 151 108 1 369 519 1 150 3.32e-13 72.8
Msa1308860 AT2G26980.2 31.250 144 97 2 376 519 18 159 3.97e-13 70.9
Msa1308860 AT2G26980.5 29.801 151 104 2 369 519 11 159 4.77e-13 72.4
Msa1308860 AT2G41860.2 33.987 153 95 4 372 520 54 204 5.19e-13 72.8
Msa1308860 AT2G41860.1 33.987 153 95 4 372 520 54 204 5.47e-13 72.8
Msa1308860 AT5G58380.1 30.282 142 96 2 378 519 18 156 6.23e-13 72.4
Msa1308860 AT5G35410.2 28.492 179 109 5 376 537 15 191 6.23e-13 71.6
Msa1308860 AT1G50700.3 33.333 153 96 4 372 520 73 223 7.24e-13 72.0
Msa1308860 AT4G35310.2 33.333 153 96 4 372 520 97 247 7.45e-13 72.4
Msa1308860 AT4G35310.1 33.333 153 96 4 372 520 97 247 7.45e-13 72.4
Msa1308860 AT2G35890.2 28.899 218 144 6 317 526 72 286 9.57e-13 72.0
Msa1308860 AT2G35890.1 28.899 218 144 6 317 526 72 286 9.57e-13 72.0
Msa1308860 AT1G50700.1 33.333 153 96 4 372 520 73 223 1.01e-12 72.0
Msa1308860 AT1G53165.1 26.630 184 121 4 369 552 15 184 1.05e-12 72.0
Msa1308860 AT1G63700.1 29.299 157 107 2 370 524 398 552 1.05e-12 72.4
Msa1308860 AT1G63700.2 29.299 157 107 2 370 524 398 552 1.05e-12 72.4
Msa1308860 AT1G53165.3 26.630 184 121 4 369 552 15 184 1.28e-12 72.0
Msa1308860 AT5G35410.1 28.492 179 109 5 376 537 15 191 1.33e-12 71.2
Msa1308860 AT1G53165.2 26.630 184 121 4 369 552 15 184 1.34e-12 72.0
Msa1308860 AT4G24100.1 28.571 182 119 3 372 553 33 203 1.47e-12 71.6
Msa1308860 AT1G50700.2 33.333 153 96 4 372 520 73 223 1.57e-12 71.2
Msa1308860 AT4G24100.4 28.571 182 119 3 372 553 49 219 1.91e-12 71.2
Msa1308860 AT4G24100.2 28.571 182 119 3 372 553 33 203 2.05e-12 71.2
Msa1308860 AT3G20410.2 31.765 170 107 5 355 520 77 241 2.17e-12 70.9
Msa1308860 AT3G20410.1 31.765 170 107 5 355 520 77 241 2.17e-12 70.9
Msa1308860 AT4G24100.3 28.571 182 119 3 372 553 49 219 2.52e-12 70.9
Msa1308860 AT2G17290.1 33.333 153 96 4 372 520 85 235 2.77e-12 70.5
Msa1308860 AT2G17290.2 33.333 153 96 4 372 520 85 235 2.77e-12 70.5
Msa1308860 AT2G38490.1 35.762 151 88 5 372 519 28 172 3.03e-12 70.1
Msa1308860 AT1G24650.1 31.937 191 112 9 340 518 513 697 3.29e-12 70.9
Msa1308860 AT5G19360.1 32.903 155 98 5 370 520 66 218 3.71e-12 70.1
Msa1308860 AT5G01820.1 31.757 148 98 1 372 519 22 166 5.96e-12 68.9
Msa1308860 AT4G10730.2 28.947 190 120 6 372 560 27 202 7.09e-12 69.3
Msa1308860 AT3G57530.2 32.903 155 98 4 370 520 61 213 7.52e-12 68.6
Msa1308860 AT4G10730.1 28.947 190 120 6 372 560 47 222 7.74e-12 69.3
Msa1308860 AT5G12180.1 32.680 153 97 5 372 520 73 223 8.80e-12 68.9
Msa1308860 AT3G57530.1 34.559 136 86 3 370 504 61 194 9.21e-12 68.9
Msa1308860 AT1G01140.2 28.743 167 112 3 353 519 5 164 1.12e-11 68.2
Msa1308860 AT1G01140.1 28.743 167 112 3 353 519 5 164 1.12e-11 68.2
Msa1308860 AT1G01140.3 28.743 167 112 3 353 519 5 164 1.14e-11 68.2
Msa1308860 AT2G31500.1 33.987 153 95 4 372 520 66 216 1.66e-11 68.2
Msa1308860 AT1G32320.1 32.192 146 89 3 375 519 51 187 1.87e-11 66.2
Msa1308860 AT1G73500.1 31.288 163 93 5 375 533 50 197 1.87e-11 66.6
Msa1308860 AT3G56760.1 30.729 192 117 6 370 554 122 304 2.62e-11 67.4
Msa1308860 AT1G50240.3 27.059 170 120 2 367 536 1 166 2.70e-11 68.2
Msa1308860 AT1G50240.3 33.981 103 62 2 603 705 161 257 4.99e-11 67.0
Msa1308860 AT1G50240.2 27.059 170 120 2 367 536 1 166 2.70e-11 68.2
Msa1308860 AT1G50240.2 33.981 103 62 2 603 705 161 257 4.99e-11 67.0
Msa1308860 AT4G14480.1 29.530 149 102 2 372 519 15 161 2.75e-11 67.0
Msa1308860 AT2G17890.1 30.921 152 101 2 372 519 108 259 2.81e-11 67.4
Msa1308860 AT5G23580.1 30.726 179 115 5 349 523 2 175 3.05e-11 67.0
Msa1308860 AT3G23000.1 29.747 158 96 3 369 519 22 171 3.10e-11 66.6
Msa1308860 AT1G69220.2 29.371 143 98 2 381 523 231 370 3.29e-11 67.4
Msa1308860 AT3G61960.2 34.884 129 81 3 377 505 15 140 3.38e-11 67.0
Msa1308860 AT5G18610.1 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1308860 AT5G18610.2 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1308860 AT5G18610.3 34.356 163 99 4 362 519 73 232 3.39e-11 67.0
Msa1308860 AT3G61960.1 34.884 129 81 3 377 505 15 140 3.45e-11 67.0
Msa1308860 AT4G38230.2 32.680 153 97 4 372 520 54 204 3.68e-11 67.0
Msa1308860 AT5G66210.6 30.065 153 103 2 371 519 61 213 3.81e-11 66.6
Msa1308860 AT5G66210.4 30.065 153 103 2 371 519 61 213 3.81e-11 66.6
Msa1308860 AT5G66210.3 30.065 153 103 2 371 519 61 213 4.09e-11 66.6
Msa1308860 AT4G38230.4 32.680 153 97 4 372 520 24 174 5.49e-11 66.2
Msa1308860 AT4G38230.3 32.680 153 97 4 372 520 24 174 5.49e-11 66.2
Msa1308860 AT5G66210.1 30.065 153 103 2 371 519 61 213 5.63e-11 66.2
Msa1308860 AT5G66210.2 30.065 153 103 2 371 519 61 213 5.63e-11 66.2
Msa1308860 AT4G29810.1 30.508 177 116 4 360 534 58 229 5.69e-11 65.5
Msa1308860 AT5G66210.5 30.065 153 103 2 371 519 61 213 5.72e-11 66.2
Msa1308860 AT4G04710.2 27.619 210 133 7 350 552 17 214 7.02e-11 65.9
Msa1308860 AT4G29810.2 30.508 177 116 4 360 534 67 238 8.34e-11 65.1
Msa1308860 AT4G04710.1 27.619 210 133 7 350 552 17 214 8.77e-11 65.5
Msa1308860 AT4G04710.4 27.619 210 133 7 350 552 17 214 8.96e-11 65.5
Msa1308860 AT4G29810.3 31.214 173 112 4 364 534 71 238 8.98e-11 64.7

Find 237 sgRNAs with CRISPR-Local

Find 338 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCCTCGAAACTTGCCGATTT+TGG 0.164587 8_4:-5219249 Msa1308860:CDS
TCCACTGGTCTTGGCACTTC+TGG 0.186142 8_4:+5216340 None:intergenic
TTGATTATCCATAAGTATTC+TGG 0.187578 8_4:+5216006 None:intergenic
CCTTCCCCTTTGATAATTTC+AGG 0.198008 8_4:+5216655 None:intergenic
CCGATTACGAGATGGAATTT+TGG 0.203762 8_4:-5218199 Msa1308860:CDS
ATTTCCTTTGTGAGGCTTAT+TGG 0.207003 8_4:+5218251 None:intergenic
TTCAATTTCAATGCTGCTGC+TGG 0.223944 8_4:-5220016 Msa1308860:five_prime_UTR
TTTATTGGTTCAAGATGATA+TGG 0.255030 8_4:-5219036 Msa1308860:CDS
AGATCTGTATCAACAGGTTC+TGG 0.263724 8_4:+5218831 None:intergenic
GGTCAGAGTCAGAGACTAAA+TGG 0.280365 8_4:-5219185 Msa1308860:CDS
CTTTCTTTGAAGGTGTAAAC+TGG 0.284251 8_4:-5216387 Msa1308860:CDS
ATGGAATTTAACTACAAAAT+AGG 0.291130 8_4:+5216084 None:intergenic
GTCTTATCCCAGAATACTTA+TGG 0.294061 8_4:-5216014 Msa1308860:three_prime_UTR
TCTTTGCCTCCTACACCTAA+TGG 0.296261 8_4:-5218528 Msa1308860:CDS
GCCCATGAAGGGTCCTTTCC+TGG 0.302200 8_4:-5218742 Msa1308860:CDS
CAGATCCCTGCTGGCATAAC+TGG 0.320201 8_4:+5216486 None:intergenic
GACCGACCGTTTCTCTTGTT+TGG 0.324721 8_4:-5217959 Msa1308860:CDS
GTAGGCTCAGCAACAAGCTC+TGG 0.351703 8_4:+5216724 None:intergenic
GATCTCTCAATCCGTGTTAC+CGG 0.352022 8_4:-5218717 Msa1308860:CDS
CCAAAATTCCATCTCGTAAT+CGG 0.356631 8_4:+5218199 None:intergenic
AAGCAGCATCCTTTCTTTGA+AGG 0.363915 8_4:-5216397 Msa1308860:CDS
AATTGGACTTGGTTTCTTCC+CGG 0.368313 8_4:+5218698 None:intergenic
TTCTTGCATGAACTGTTATA+CGG 0.369620 8_4:-5216595 Msa1308860:CDS
TCAGCTTCTTTCTGCTTGCT+AGG 0.371087 8_4:+5218058 None:intergenic
ATAACTGGTCGCAGGTGATT+CGG 0.374379 8_4:+5216501 None:intergenic
GACCACCAGTTGATGCTGTC+GGG 0.375980 8_4:-5216279 Msa1308860:CDS
GACAAGTTTCTGATGTGATT+AGG 0.379723 8_4:-5215929 Msa1308860:three_prime_UTR
CTTTGCCTCCTACACCTAAT+GGG 0.380423 8_4:-5218527 Msa1308860:CDS
CCGTTTCTCTTGTTTGGTGA+TGG 0.381881 8_4:-5217953 Msa1308860:CDS
TTCATTGGTGGTGGCGGTGG+CGG 0.382553 8_4:+5216307 None:intergenic
TAACTGGTCGCAGGTGATTC+GGG 0.386536 8_4:+5216502 None:intergenic
TCTTGAGGGGAAAGAACAAT+TGG 0.387877 8_4:+5218681 None:intergenic
TGATATCCTAAGTTTAGATT+AGG 0.390070 8_4:-5216047 Msa1308860:three_prime_UTR
GCCTCAGTGATGACAGTAAC+TGG 0.392470 8_4:-5218293 Msa1308860:CDS
TATCATATTTCCAACTGAAA+TGG 0.393140 8_4:+5216065 None:intergenic
GGGAATAATGAAATGAAGTC+TGG 0.393724 8_4:-5216229 Msa1308860:CDS
GCAGTTGACTGGTGGACATT+TGG 0.399493 8_4:-5216622 Msa1308860:CDS
AAGAGCCGCAACATCGTCTT+GGG 0.401195 8_4:-5216444 Msa1308860:CDS
GGCGATCCGACTTTATTTGC+CGG 0.405063 8_4:-5218867 Msa1308860:CDS
CTCATAAGATCTGTATCAAC+AGG 0.409221 8_4:+5218825 None:intergenic
GGAAACCCAGGTTCAGCTCT+TGG 0.411838 8_4:+5216760 None:intergenic
TTCCAGGAAAGGACCCTTCA+TGG 0.420297 8_4:+5218740 None:intergenic
GTATACAAAGTTGGAAGAAA+TGG 0.421797 8_4:+5217991 None:intergenic
GAGGTGACCTACACACTTTA+AGG 0.422441 8_4:-5217918 Msa1308860:CDS
ATTGGTGGTGGCGGTGGCGG+CGG 0.424607 8_4:+5216310 None:intergenic
TGATTATCCATAAGTATTCT+GGG 0.427265 8_4:+5216007 None:intergenic
CTTGAATATCTTCACATGCT+TGG 0.427624 8_4:-5217039 Msa1308860:CDS
ACCTTCATTGGTGGTGGCGG+TGG 0.430120 8_4:+5216304 None:intergenic
ACGTCTTTACTTGAAGTTGA+AGG 0.431342 8_4:-5218948 Msa1308860:CDS
GGTGAAACCTCAACCAAAAT+CGG 0.431802 8_4:+5219236 None:intergenic
ACTTTAAGGCAGCGGCAACC+TGG 0.433550 8_4:-5217904 Msa1308860:CDS
TGTGGACTGGCATTCCCATT+AGG 0.433623 8_4:+5218513 None:intergenic
GTGTAAACTGGGCATTGATT+AGG 0.434545 8_4:-5216375 Msa1308860:CDS
CAAGTTCTTAATTAAGCATC+CGG 0.444672 8_4:+5218764 None:intergenic
CTTCAACAAGACTTTCTTGA+GGG 0.449259 8_4:+5218667 None:intergenic
TTGCTCCTGAAATTATCAAA+GGG 0.449378 8_4:-5216660 Msa1308860:CDS
AGTAACTGGAGCAACCTTAC+TGG 0.455347 8_4:-5218279 Msa1308860:CDS
AGTACTAGTAAGAGGATGTC+GGG 0.455362 8_4:-5216250 Msa1308860:CDS
ACTGGTGGTCCAACCTTCAT+TGG 0.456414 8_4:+5216292 None:intergenic
CTTACAGTTGCCGCCGTATG+TGG 0.456808 8_4:+5219215 None:intergenic
ACCAAAATCGGCAAGTTTCG+AGG 0.459495 8_4:+5219248 None:intergenic
CTGGGATCATTTCCTTTGTG+AGG 0.459717 8_4:+5218243 None:intergenic
GGAAAGCAGCGATTCGTTTG+AGG 0.460403 8_4:-5218892 Msa1308860:CDS
GATCTGTATCAACAGGTTCT+GGG 0.460711 8_4:+5218832 None:intergenic
TGACGGTGACCCTTCAAAAC+GGG 0.464150 8_4:-5216896 Msa1308860:CDS
CAGCTTCTTTCTGCTTGCTA+GGG 0.468174 8_4:+5218059 None:intergenic
CAATGAATGTGTGAGATTGC+TGG 0.468798 8_4:-5215829 None:intergenic
TCAAAATGTGTATACAAAGT+TGG 0.468878 8_4:+5217982 None:intergenic
GGTTTCCCGACCCTTTGAAA+GGG 0.469448 8_4:+5216566 None:intergenic
CCAACCCCGACAGCATCAAC+TGG 0.474246 8_4:+5216274 None:intergenic
CTATCTCCTTTGAGCCTACT+CGG 0.476224 8_4:-5218986 Msa1308860:CDS
TACGGTAAAACCCCTTTCAA+AGG 0.476458 8_4:-5216577 Msa1308860:CDS
GACTTGGATGTGGTGACATT+GGG 0.478567 8_4:-5218149 Msa1308860:CDS
CCAGTTGATGCTGTCGGGGT+TGG 0.480914 8_4:-5216274 Msa1308860:CDS
CAGTTTACACCTTCAAAGAA+AGG 0.482696 8_4:+5216388 None:intergenic
CGGTTTCCCGACCCTTTGAA+AGG 0.484132 8_4:+5216565 None:intergenic
GGTTGAGGTTTCACCACATA+CGG 0.485799 8_4:-5219228 Msa1308860:CDS
TCAATTTCAATGCTGCTGCT+GGG 0.486016 8_4:-5220015 Msa1308860:intron
TAAAGTGTGTAGGTCACCTC+CGG 0.487101 8_4:+5217921 None:intergenic
AATTAAGAACTTGCCCATGA+AGG 0.490933 8_4:-5218754 Msa1308860:CDS
ATCGAGGCCAAACGTGTCAT+AGG 0.491526 8_4:+5219092 None:intergenic
GGATGTGCCTATGACACGTT+TGG 0.494093 8_4:-5219099 Msa1308860:CDS
AAAACCCCTTTCAAAGGGTC+GGG 0.494609 8_4:-5216571 Msa1308860:CDS
GCTTATTGGCACTACCAGTA+AGG 0.495920 8_4:+5218265 None:intergenic
AACAAGCTCTGGAAGTCTGC+TGG 0.498281 8_4:+5216735 None:intergenic
AAAGAGCCGCAACATCGTCT+TGG 0.499673 8_4:-5216445 Msa1308860:CDS
ATAGCACCAAGGGTAGTGTA+AGG 0.499913 8_4:-5218371 Msa1308860:CDS
GGGGAAAGAACAATTGGACT+TGG 0.500249 8_4:+5218687 None:intergenic
ATGACGGTGACCCTTCAAAA+CGG 0.500802 8_4:-5216897 Msa1308860:CDS
TAGTTAAATTCCATTTCAGT+TGG 0.502191 8_4:-5216075 Msa1308860:three_prime_UTR
CCAACCTTCATTGGTGGTGG+CGG 0.502378 8_4:+5216301 None:intergenic
ATCTATACTACTATGTGGAC+TGG 0.506600 8_4:+5218500 None:intergenic
CACGGATTGAGAGATCTTCC+AGG 0.506931 8_4:+5218724 None:intergenic
ATTAAGAACTTGCCCATGAA+GGG 0.509867 8_4:-5218753 Msa1308860:CDS
GAAAGGATGCTGCTTGATCT+CGG 0.511805 8_4:+5216405 None:intergenic
CGACTTGGATGTGGTGACAT+TGG 0.512089 8_4:-5218150 Msa1308860:CDS
TAAACTAAGCATGCCATCGC+TGG 0.514066 8_4:+5218407 None:intergenic
ATTCAACCTAATCTAAACTT+AGG 0.514075 8_4:+5216041 None:intergenic
CTCACAAAGGAAATGATCCC+AGG 0.514314 8_4:-5218242 Msa1308860:CDS
CTGCGACCAGTTATGCCAGC+AGG 0.514380 8_4:-5216492 Msa1308860:CDS
GCCACCGCCACCACCAATGA+AGG 0.515875 8_4:-5216305 Msa1308860:CDS
CTTGCTCCTGAAATTATCAA+AGG 0.515966 8_4:-5216661 Msa1308860:CDS
GGTCAAAACAAATCTGAGTC+CGG 0.516128 8_4:-5218783 Msa1308860:CDS
TTTCAGGAGCAAGGTATTCG+TGG 0.516151 8_4:+5216671 None:intergenic
AGAATTGAATCAATTGTCGC+AGG 0.517107 8_4:-5219126 Msa1308860:CDS
GAATCAATTGTCGCAGGGAA+GGG 0.518040 8_4:-5219120 Msa1308860:CDS
TTTCTGATGTGATTAGGTAC+AGG 0.518524 8_4:-5215923 Msa1308860:three_prime_UTR
GGTCCAACCTTCATTGGTGG+TGG 0.520213 8_4:+5216298 None:intergenic
GGACCACCAGTTGATGCTGT+CGG 0.520532 8_4:-5216280 Msa1308860:CDS
GACATAGAACGGGCAGCAGT+AGG 0.521733 8_4:+5216706 None:intergenic
CTTTGATAATTTCAGGAGCA+AGG 0.522560 8_4:+5216662 None:intergenic
ACCGACGAAGGACATAGAAC+GGG 0.523482 8_4:+5216696 None:intergenic
ACGGTAAAACCCCTTTCAAA+GGG 0.524392 8_4:-5216576 Msa1308860:CDS
GACGCTCGAGAACCTGCAAA+AGG 0.524432 8_4:+5218615 None:intergenic
TTTCCTTTCCATGTCCGAGT+AGG 0.524678 8_4:+5218972 None:intergenic
TATTCAGAGAAATGTTTCCC+AGG 0.527556 8_4:+5217886 None:intergenic
AGTCATAGACTTTCAGAAGA+TGG 0.528897 8_4:+5215877 None:intergenic
TAAAACCCCTTTCAAAGGGT+CGG 0.529026 8_4:-5216572 Msa1308860:CDS
ATCTCTCAATCCGTGTTACC+GGG 0.530112 8_4:-5218716 Msa1308860:CDS
CTTTAAGGCAGCGGCAACCT+GGG 0.531322 8_4:-5217903 Msa1308860:CDS
TGAATCAATTGTCGCAGGGA+AGG 0.533409 8_4:-5219121 Msa1308860:CDS
CATAGTAGTATAGATAGTAT+TGG 0.534889 8_4:-5218492 Msa1308860:CDS
CCGCCACCACCAATGAAGGT+TGG 0.535518 8_4:-5216301 Msa1308860:CDS
ATCACCCCTTACACTACCCT+TGG 0.535850 8_4:+5218365 None:intergenic
ATTATCAAAGGGGAAGGTCA+TGG 0.538808 8_4:-5216649 Msa1308860:CDS
GTCAGAGTCAGAGACTAAAT+GGG 0.543984 8_4:-5219184 Msa1308860:CDS
TTTCGATTACTCAAACGACT+TGG 0.544521 8_4:-5218165 Msa1308860:CDS
GGAATAATGAAATGAAGTCT+GGG 0.545579 8_4:-5216228 Msa1308860:CDS
TGCTATGAAGGTTATGGACA+AGG 0.546101 8_4:-5218085 Msa1308860:CDS
TTGGTGATGGAATATTGTCC+CGG 0.547008 8_4:-5217940 Msa1308860:CDS
GAGTCAGAGACTAAATGGGC+AGG 0.548886 8_4:-5219180 Msa1308860:CDS
CCTTTGAGCCTACTCGGACA+TGG 0.551009 8_4:-5218980 Msa1308860:CDS
AGGAAGCCAAGAGCTGAACC+TGG 0.553932 8_4:-5216766 Msa1308860:CDS
ACTGGTCTTGGCACTTCTGG+TGG 0.554421 8_4:+5216343 None:intergenic
ATCTGTATCAACAGGTTCTG+GGG 0.557890 8_4:+5218833 None:intergenic
GAGCCTACTCGGACATGGAA+AGG 0.558030 8_4:-5218975 Msa1308860:CDS
GTCATGGAAGTGCAGTTGAC+TGG 0.558774 8_4:-5216633 Msa1308860:CDS
CCTTAAACCTGAAAATGTGT+TGG 0.562690 8_4:-5217001 Msa1308860:CDS
GGCTCAAAGGAGATAGACTC+AGG 0.562900 8_4:+5218993 None:intergenic
TTCAGGAGCAAGGTATTCGT+GGG 0.563447 8_4:+5216672 None:intergenic
CTGCTGGCATAACTGGTCGC+AGG 0.564301 8_4:+5216493 None:intergenic
CCATCACCAAACAAGAGAAA+CGG 0.565842 8_4:+5217953 None:intergenic
ACCTACACACTTTAAGGCAG+CGG 0.566025 8_4:-5217912 Msa1308860:CDS
GCCGCGGATCAGATCCCTGC+TGG 0.566460 8_4:+5216477 None:intergenic
CAGTACTAGTAAGAGGATGT+CGG 0.571745 8_4:-5216251 Msa1308860:CDS
AGATAGTATTGGTGTTGTCA+AGG 0.574128 8_4:-5218481 Msa1308860:CDS
TCCAGGAAAGGACCCTTCAT+GGG 0.574752 8_4:+5218741 None:intergenic
TGATACAGATCTTATGAGAA+CGG 0.575155 8_4:-5218820 Msa1308860:CDS
TCTCGGAGCTGAGTGGAACT+CGG 0.575771 8_4:-5218116 Msa1308860:CDS
CATTGGGAGTGTATATCTCT+CGG 0.576510 8_4:-5218133 Msa1308860:CDS
TTTCTTCGGAATCTGGAGCA+AGG 0.576545 8_4:+5218571 None:intergenic
GGTTGTATGCATACTGATGT+TGG 0.577407 8_4:+5216835 None:intergenic
TTGGTTTCTTCCCGGTAACA+CGG 0.578900 8_4:+5218706 None:intergenic
CTACGTTGAAAAGCGTAGCA+CGG 0.581312 8_4:+5216545 None:intergenic
AGCACCAAGGGTAGTGTAAG+GGG 0.581727 8_4:-5218369 Msa1308860:CDS
GTTTCCCGACCCTTTGAAAG+GGG 0.581775 8_4:+5216567 None:intergenic
TTTCTTTGAAGGTGTAAACT+GGG 0.582156 8_4:-5216386 Msa1308860:CDS
GGGTTGGCAGTACTAGTAAG+AGG 0.582737 8_4:-5216258 Msa1308860:CDS
TTACTCAAACGACTTGGATG+TGG 0.585897 8_4:-5218159 Msa1308860:CDS
GACCCTTCAAAACGGGCTGG+TGG 0.586601 8_4:-5216889 Msa1308860:CDS
TGGCTCAGTTGTCGAATGCA+CGG 0.587108 8_4:-5219061 Msa1308860:CDS
GCATTCCCATTAGGTGTAGG+AGG 0.587144 8_4:+5218522 None:intergenic
GGTGACCCTTCAAAACGGGC+TGG 0.587637 8_4:-5216892 Msa1308860:CDS
GCCCGTTCTATGTCCTTCGT+CGG 0.587999 8_4:-5216697 Msa1308860:CDS
AGTCTGCTGGAAGGAAACCC+AGG 0.588599 8_4:+5216748 None:intergenic
GATGTTGGCTCAATACAAGC+AGG 0.588948 8_4:+5216850 None:intergenic
AGACGAGGAATAAAACATGC+AGG 0.589247 8_4:+5216814 None:intergenic
CTGGCATTCCCATTAGGTGT+AGG 0.589407 8_4:+5218519 None:intergenic
CCATGTCCGAGTAGGCTCAA+AGG 0.589610 8_4:+5218980 None:intergenic
GGTGGTCCAACCTTCATTGG+TGG 0.590386 8_4:+5216295 None:intergenic
GAAGCTGACTAGAGCACAGA+CGG 0.590727 8_4:-5218043 Msa1308860:CDS
AAAGTGTGTAGGTCACCTCC+GGG 0.599022 8_4:+5217922 None:intergenic
GTATGATGTAGACACATTGA+AGG 0.599759 8_4:-5218913 Msa1308860:CDS
TAGCACCAAGGGTAGTGTAA+GGG 0.600357 8_4:-5218370 Msa1308860:CDS
GAAGATATTCAAGAGCAAGC+AGG 0.600708 8_4:+5217049 None:intergenic
TGTGATATTTAGACATGGAG+AGG 0.601193 8_4:-5219292 Msa1308860:exon
TACCGACGAAGGACATAGAA+CGG 0.601467 8_4:+5216695 None:intergenic
ATACTATCTATACTACTATG+TGG 0.601696 8_4:+5218495 None:intergenic
TAGGTAAAGCTGAACTAACA+TGG 0.603682 8_4:+5216103 None:intergenic
TTCAACAAGACTTTCTTGAG+GGG 0.604893 8_4:+5218668 None:intergenic
TCATAACCTCTAACAAGAGT+AGG 0.607050 8_4:+5216916 None:intergenic
AGCTCTGGAAGTCTGCTGGA+AGG 0.607447 8_4:+5216739 None:intergenic
CCTGAAATTATCAAAGGGGA+AGG 0.607684 8_4:-5216655 Msa1308860:CDS
AGAAACTTTGATAGCACCAA+GGG 0.612451 8_4:-5218381 Msa1308860:CDS
AGGCAAAACAGTACATCTGA+GGG 0.613764 8_4:+5216936 None:intergenic
TAGGCAAAACAGTACATCTG+AGG 0.614710 8_4:+5216935 None:intergenic
GAATTGAATCAATTGTCGCA+GGG 0.615427 8_4:-5219125 Msa1308860:CDS
GCGGCAACTGTAAGAGAGGT+AGG 0.615733 8_4:-5219206 Msa1308860:CDS
AGCAGCGATTCGTTTGAGGA+CGG 0.623589 8_4:-5218888 Msa1308860:CDS
GTTGAAGAACTGAATGACAC+GGG 0.624022 8_4:-5218651 Msa1308860:CDS
TGCGACCAGTTATGCCAGCA+GGG 0.625195 8_4:-5216491 Msa1308860:CDS
TCTTCAACAAGACTTTCTTG+AGG 0.627306 8_4:+5218666 None:intergenic
GTATATCTCTCGGAGCTGAG+TGG 0.628641 8_4:-5218123 Msa1308860:CDS
ACCAGAAGTGCCAAGACCAG+TGG 0.629425 8_4:-5216341 Msa1308860:CDS
GGCAAGGATAGCATTCCACC+TGG 0.629654 8_4:+5218224 None:intergenic
GTATTCGTGGGTACCGACGA+AGG 0.630369 8_4:+5216684 None:intergenic
CTGAGCCACTTCTCTGATCG+AGG 0.631057 8_4:+5219076 None:intergenic
ATTGAGAGATCTTCCAGGAA+AGG 0.631186 8_4:+5218729 None:intergenic
TTTGGCCTCGATCAGAGAAG+TGG 0.631283 8_4:-5219081 Msa1308860:CDS
ACAAAGTTGGAAGAAATGGA+TGG 0.634189 8_4:+5217995 None:intergenic
AATTCCATCTCGTAATCGGA+CGG 0.637708 8_4:+5218203 None:intergenic
GGAAGCCAAGAGCTGAACCT+GGG 0.638723 8_4:-5216765 Msa1308860:CDS
CATCGTCTTGGGGTTAAGAG+AGG 0.639049 8_4:-5216433 Msa1308860:CDS
ATGGAAGTGCAGTTGACTGG+TGG 0.640074 8_4:-5216630 Msa1308860:CDS
GATTAGGTACAGGCAGCTGA+TGG 0.641997 8_4:-5215913 Msa1308860:three_prime_UTR
GCCAGCAGGGATCTGATCCG+CGG 0.644092 8_4:-5216478 Msa1308860:CDS
GGCCACTGCTATCACTTGCA+CGG 0.646241 8_4:+5218313 None:intergenic
AGTGATGCAATGACCAGCGA+TGG 0.649037 8_4:-5218420 Msa1308860:CDS
ACCCCGACAGCATCAACTGG+TGG 0.652680 8_4:+5216277 None:intergenic
TACGGCGGCAACTGTAAGAG+AGG 0.654423 8_4:-5219210 Msa1308860:CDS
ACCACCAGTTGATGCTGTCG+GGG 0.654905 8_4:-5216278 Msa1308860:CDS
CTAGCACCGGCAAATAAAGT+CGG 0.655368 8_4:+5218861 None:intergenic
TCGAGAACCTGCAAAAGGCG+AGG 0.656917 8_4:+5218620 None:intergenic
TCTGTATCAACAGGTTCTGG+GGG 0.657501 8_4:+5218834 None:intergenic
ACTCTTGTTAGAGGTTATGA+CGG 0.658841 8_4:-5216913 Msa1308860:CDS
TGTTGAAGAACTGAATGACA+CGG 0.658914 8_4:-5218652 Msa1308860:CDS
GAATAATGAAATGAAGTCTG+GGG 0.660609 8_4:-5216227 Msa1308860:CDS
AATGTGTTGGTTCGAGACGA+TGG 0.660909 8_4:-5216988 Msa1308860:CDS
TGCTCCTGAAATTATCAAAG+GGG 0.668510 8_4:-5216659 Msa1308860:CDS
TGTTATGTGATATTTAGACA+TGG 0.671093 8_4:-5219297 Msa1308860:exon
TTAACCCCAAGACGATGTTG+CGG 0.679035 8_4:+5216439 None:intergenic
GCTCTTTCACGAGTAAGCCG+CGG 0.679500 8_4:+5216461 None:intergenic
AGCCGTGCAAGTGATAGCAG+TGG 0.682214 8_4:-5218315 Msa1308860:CDS
AATAATGAAATGAAGTCTGG+GGG 0.682833 8_4:-5216226 Msa1308860:CDS
GCCGCTGCCTTAAAGTGTGT+AGG 0.687998 8_4:+5217911 None:intergenic
ACAAAGGAAATGATCCCAGG+TGG 0.691663 8_4:-5218239 Msa1308860:CDS
TAGAAACTTTGATAGCACCA+AGG 0.692800 8_4:-5218382 Msa1308860:CDS
GCAAGGATAGCATTCCACCT+GGG 0.693466 8_4:+5218225 None:intergenic
CACCAAACAAGAGAAACGGT+CGG 0.703675 8_4:+5217957 None:intergenic
TGAGGTTTCACCACATACGG+CGG 0.703917 8_4:-5219225 Msa1308860:CDS
AGTGCCAATAAGCCTCACAA+AGG 0.712756 8_4:-5218255 Msa1308860:CDS
GTACTAGTAAGAGGATGTCG+GGG 0.718551 8_4:-5216249 Msa1308860:CDS
AGAGCCGCAACATCGTCTTG+GGG 0.734595 8_4:-5216443 Msa1308860:CDS
GTGATGGAATATTGTCCCGG+AGG 0.741667 8_4:-5217937 Msa1308860:CDS
TTGAAGAACTGAATGACACG+GGG 0.749290 8_4:-5218650 Msa1308860:CDS
TCCAGTTACTGTCATCACTG+AGG 0.753388 8_4:+5218292 None:intergenic
ATTTCTCTGAATATGCTGCG+CGG 0.772477 8_4:-5217876 Msa1308860:intron

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAAAAACAGAAACAAAAA+TGG + chr8_4:5216073-5216092 None:intergenic 15.0%
!!! TTTCATGTTTTATTTTTTGT+TGG - chr8_4:5216466-5216485 Msa1308860:CDS 15.0%
!!! ATATAGAAAAAGTATAAACA+TGG + chr8_4:5216521-5216540 None:intergenic 15.0%
!!! ATGTATCTTTTGCAAAATTA+CGG + chr8_4:5216345-5216364 None:intergenic 20.0%
!!! TATCTTTTGAAAAATTACTG+TGG - chr8_4:5216364-5216383 Msa1308860:CDS 20.0%
!! ATGTATGTGAAAATAATTGA+TGG - chr8_4:5216551-5216570 Msa1308860:CDS 20.0%
!! CTTATAATTTCAAAAGAAAG+AGG - chr8_4:5218371-5218390 Msa1308860:CDS 20.0%
!! ATACAATAAAAAGTAGATCA+AGG + chr8_4:5219776-5219795 None:intergenic 20.0%
!! ATGGAATTTAACTACAAAAT+AGG + chr8_4:5219859-5219878 None:intergenic 20.0%
! AGGAAATGAAAGAAAGAAAA+TGG + chr8_4:5215986-5216005 None:intergenic 25.0%
! TATGTTTATCTATGCATGTT+TGG - chr8_4:5216294-5216313 Msa1308860:CDS 25.0%
!!! TATTTTTTGTTGGATAGTTC+AGG - chr8_4:5216476-5216495 Msa1308860:CDS 25.0%
!! ACATTTTTGTTCTATTTTGC+AGG - chr8_4:5216589-5216608 Msa1308860:CDS 25.0%
! TGTTATGTGATATTTAGACA+TGG - chr8_4:5216643-5216662 Msa1308860:CDS 25.0%
!!! TTTATTGGTTCAAGATGATA+TGG - chr8_4:5216904-5216923 Msa1308860:CDS 25.0%
! ATACTATCTATACTACTATG+TGG + chr8_4:5217448-5217467 None:intergenic 25.0%
! CATAGTAGTATAGATAGTAT+TGG - chr8_4:5217448-5217467 Msa1308860:intron 25.0%
!!! TTATTTTGCTATGAAGGTTA+TGG - chr8_4:5217849-5217868 Msa1308860:intron 25.0%
! TCAAAATGTGTATACAAAGT+TGG + chr8_4:5217961-5217980 None:intergenic 25.0%
! AAGTAACAAAGATCAGATAA+AGG + chr8_4:5218112-5218131 None:intergenic 25.0%
! TGCCATTCAATTATATTCAA+GGG + chr8_4:5218421-5218440 None:intergenic 25.0%
! TTGCCATTCAATTATATTCA+AGG + chr8_4:5218422-5218441 None:intergenic 25.0%
! ACAGTGTTATATTCAAACTA+TGG - chr8_4:5218640-5218659 Msa1308860:CDS 25.0%
! ACAGTGTTATATTCAAACTA+TGG - chr8_4:5218640-5218659 Msa1308860:CDS 25.0%
!!! GATTTTGAGTTCTTTTAGTT+TGG - chr8_4:5219747-5219766 Msa1308860:intron 25.0%
! TAGTTAAATTCCATTTCAGT+TGG - chr8_4:5219865-5219884 Msa1308860:intron 25.0%
! TATCATATTTCCAACTGAAA+TGG + chr8_4:5219878-5219897 None:intergenic 25.0%
! TGATATCCTAAGTTTAGATT+AGG - chr8_4:5219893-5219912 Msa1308860:intron 25.0%
! ATTCAACCTAATCTAAACTT+AGG + chr8_4:5219902-5219921 None:intergenic 25.0%
! TGATTATCCATAAGTATTCT+GGG + chr8_4:5219936-5219955 None:intergenic 25.0%
! TTGATTATCCATAAGTATTC+TGG + chr8_4:5219937-5219956 None:intergenic 25.0%
GAAAATGGAGAGAAGTAAAA+GGG + chr8_4:5215971-5215990 None:intergenic 30.0%
AGAAAATGGAGAGAAGTAAA+AGG + chr8_4:5215972-5215991 None:intergenic 30.0%
! AGACGAGATCTAAGATTAAA+AGG + chr8_4:5216006-5216025 None:intergenic 30.0%
ATTGAAACAACACAATGCAT+TGG + chr8_4:5216045-5216064 None:intergenic 30.0%
!! AATGCATTGTGTTGTTTCAA+TGG - chr8_4:5216044-5216063 Msa1308860:three_prime_UTR 30.0%
! TATCTTTTGCAAAATTACGG+TGG + chr8_4:5216342-5216361 None:intergenic 30.0%
TACCAAACATTTGCAAATCA+CGG - chr8_4:5216399-5216418 Msa1308860:CDS 30.0%
TGATACAGATCTTATGAGAA+CGG - chr8_4:5217120-5217139 Msa1308860:intron 30.0%
!!! TCAGATTTGTTTTGACCTAT+CGG + chr8_4:5217154-5217173 None:intergenic 30.0%
CAAGTTCTTAATTAAGCATC+CGG + chr8_4:5217179-5217198 None:intergenic 30.0%
! CCAAACACATTCTTTTTCTT+CGG + chr8_4:5217386-5217405 None:intergenic 30.0%
CGAAGAAAAAGAATGTGTTT+GGG - chr8_4:5217384-5217403 Msa1308860:intron 30.0%
GTATACAAAGTTGGAAGAAA+TGG + chr8_4:5217952-5217971 None:intergenic 30.0%
TCAAAAGAAAGAGGAAGTTA+TGG - chr8_4:5218380-5218399 Msa1308860:CDS 30.0%
TCCCCTTGAATATAATTGAA+TGG - chr8_4:5218416-5218435 Msa1308860:CDS 30.0%
GCCATTCAATTATATTCAAG+GGG + chr8_4:5218420-5218439 None:intergenic 30.0%
TATAATTGAATGGCAACACA+TGG - chr8_4:5218426-5218445 Msa1308860:CDS 30.0%
!! CTCTTTGAAATTTGAAACAC+AGG - chr8_4:5218734-5218753 Msa1308860:CDS 30.0%
!!! ATGATGTAGCTAGCATTTTT+TGG - chr8_4:5218787-5218806 Msa1308860:CDS 30.0%
!!! CTTGATTTCTTGTTTTTCTG+AGG + chr8_4:5219156-5219175 None:intergenic 30.0%
CTCAGAAAAACAAGAAATCA+AGG - chr8_4:5219154-5219173 Msa1308860:CDS 30.0%
TTGCTCCTGAAATTATCAAA+GGG - chr8_4:5219280-5219299 Msa1308860:CDS 30.0%
TTCTTGCATGAACTGTTATA+CGG - chr8_4:5219345-5219364 Msa1308860:intron 30.0%
! TTTCTTTGAAGGTGTAAACT+GGG - chr8_4:5219554-5219573 Msa1308860:intron 30.0%
GGAATAATGAAATGAAGTCT+GGG - chr8_4:5219712-5219731 Msa1308860:intron 30.0%
GAATAATGAAATGAAGTCTG+GGG - chr8_4:5219713-5219732 Msa1308860:intron 30.0%
AATAATGAAATGAAGTCTGG+GGG - chr8_4:5219714-5219733 Msa1308860:intron 30.0%
TGTTAATACCTTCCTAGTTC+AGG - chr8_4:5216122-5216141 Msa1308860:three_prime_UTR 35.0%
TAACAGAAACAACCTGAACT+AGG + chr8_4:5216137-5216156 None:intergenic 35.0%
CAGGAATTCAAGACTTATCT+TGG - chr8_4:5216495-5216514 Msa1308860:CDS 35.0%
TGTGATATTTAGACATGGAG+AGG - chr8_4:5216648-5216667 Msa1308860:CDS 35.0%
AGAATTGAATCAATTGTCGC+AGG - chr8_4:5216814-5216833 Msa1308860:CDS 35.0%
GAATTGAATCAATTGTCGCA+GGG - chr8_4:5216815-5216834 Msa1308860:CDS 35.0%
ACGTCTTTACTTGAAGTTGA+AGG - chr8_4:5216992-5217011 Msa1308860:CDS 35.0%
GTATGATGTAGACACATTGA+AGG - chr8_4:5217027-5217046 Msa1308860:CDS 35.0%
CTCATAAGATCTGTATCAAC+AGG + chr8_4:5217118-5217137 None:intergenic 35.0%
AATTAAGAACTTGCCCATGA+AGG - chr8_4:5217186-5217205 Msa1308860:intron 35.0%
ATTAAGAACTTGCCCATGAA+GGG - chr8_4:5217187-5217206 Msa1308860:intron 35.0%
TTCAACAAGACTTTCTTGAG+GGG + chr8_4:5217275-5217294 None:intergenic 35.0%
CTTCAACAAGACTTTCTTGA+GGG + chr8_4:5217276-5217295 None:intergenic 35.0%
TCTTCAACAAGACTTTCTTG+AGG + chr8_4:5217277-5217296 None:intergenic 35.0%
TGTTGAAGAACTGAATGACA+CGG - chr8_4:5217288-5217307 Msa1308860:intron 35.0%
! CATTCTTTTTCTTCGGAATC+TGG + chr8_4:5217379-5217398 None:intergenic 35.0%
CCGAAGAAAAAGAATGTGTT+TGG - chr8_4:5217383-5217402 Msa1308860:intron 35.0%
ATCTATACTACTATGTGGAC+TGG + chr8_4:5217443-5217462 None:intergenic 35.0%
!! AGATAGTATTGGTGTTGTCA+AGG - chr8_4:5217459-5217478 Msa1308860:intron 35.0%
! TAGAAACTTTGATAGCACCA+AGG - chr8_4:5217558-5217577 Msa1308860:intron 35.0%
! AGAAACTTTGATAGCACCAA+GGG - chr8_4:5217559-5217578 Msa1308860:intron 35.0%
ATTTCCTTTGTGAGGCTTAT+TGG + chr8_4:5217692-5217711 None:intergenic 35.0%
CCAAAATTCCATCTCGTAAT+CGG + chr8_4:5217744-5217763 None:intergenic 35.0%
! CGATTACGAGATGGAATTTT+GGG - chr8_4:5217742-5217761 Msa1308860:intron 35.0%
TTTCGATTACTCAAACGACT+TGG - chr8_4:5217775-5217794 Msa1308860:intron 35.0%
!!! TCGGTGTTATTTTGCTATGA+AGG - chr8_4:5217843-5217862 Msa1308860:intron 35.0%
ACAAAGTTGGAAGAAATGGA+TGG + chr8_4:5217948-5217967 None:intergenic 35.0%
TATTCAGAGAAATGTTTCCC+AGG + chr8_4:5218057-5218076 None:intergenic 35.0%
! TGCAAAGCAGATTTTCATGA+GGG + chr8_4:5218141-5218160 None:intergenic 35.0%
! ATGCAAAGCAGATTTTCATG+AGG + chr8_4:5218142-5218161 None:intergenic 35.0%
CTCGATAACGCTTTATGAAA+AGG + chr8_4:5218246-5218265 None:intergenic 35.0%
GATCCTTTATCTGTTACATC+TGG - chr8_4:5218330-5218349 Msa1308860:CDS 35.0%
CTTCCAGATGTAACAGATAA+AGG + chr8_4:5218336-5218355 None:intergenic 35.0%
CTTTATCTGTTACATCTGGA+AGG - chr8_4:5218334-5218353 Msa1308860:CDS 35.0%
! CAAATTTTATCCTCCTTCCT+TGG + chr8_4:5218458-5218477 None:intergenic 35.0%
TAGTATTGCACAACCTTCAT+TGG + chr8_4:5218527-5218546 None:intergenic 35.0%
! TAGCAGAAAACTTTTCCTTC+AGG + chr8_4:5218556-5218575 None:intergenic 35.0%
CTTGAATATCTTCACATGCT+TGG - chr8_4:5218901-5218920 Msa1308860:CDS 35.0%
!!! CCAACACATTTTCAGGTTTA+AGG + chr8_4:5218942-5218961 None:intergenic 35.0%
CCTTAAACCTGAAAATGTGT+TGG - chr8_4:5218939-5218958 Msa1308860:CDS 35.0%
TCATAACCTCTAACAAGAGT+AGG + chr8_4:5219027-5219046 None:intergenic 35.0%
ACTCTTGTTAGAGGTTATGA+CGG - chr8_4:5219027-5219046 Msa1308860:CDS 35.0%
! CTTTGATAATTTCAGGAGCA+AGG + chr8_4:5219281-5219300 None:intergenic 35.0%
CTTGCTCCTGAAATTATCAA+AGG - chr8_4:5219279-5219298 Msa1308860:CDS 35.0%
TGCTCCTGAAATTATCAAAG+GGG - chr8_4:5219281-5219300 Msa1308860:CDS 35.0%
CAGTTTACACCTTCAAAGAA+AGG + chr8_4:5219555-5219574 None:intergenic 35.0%
! CTTTCTTTGAAGGTGTAAAC+TGG - chr8_4:5219553-5219572 Msa1308860:intron 35.0%
GGGAATAATGAAATGAAGTC+TGG - chr8_4:5219711-5219730 Msa1308860:intron 35.0%
GCTGCAAAAATAACTGATCA+TGG + chr8_4:5219802-5219821 None:intergenic 35.0%
TAGGTAAAGCTGAACTAACA+TGG + chr8_4:5219840-5219859 None:intergenic 35.0%
GTCTTATCCCAGAATACTTA+TGG - chr8_4:5219926-5219945 Msa1308860:intron 35.0%
GACAAGTTTCTGATGTGATT+AGG - chr8_4:5220011-5220030 Msa1308860:intron 35.0%
TTTCTGATGTGATTAGGTAC+AGG - chr8_4:5220017-5220036 Msa1308860:five_prime_UTR 35.0%
AGTCATAGACTTTCAGAAGA+TGG + chr8_4:5220066-5220085 None:intergenic 35.0%
TTCAATTTCAATGCTGCTGC+TGG - chr8_4:5215924-5215943 Msa1308860:three_prime_UTR 40.0%
TCAATTTCAATGCTGCTGCT+GGG - chr8_4:5215925-5215944 Msa1308860:three_prime_UTR 40.0%
AGAAACAACCTGAACTAGGA+AGG + chr8_4:5216133-5216152 None:intergenic 40.0%
! CACCGTGATTTGCAAATGTT+TGG + chr8_4:5216404-5216423 None:intergenic 40.0%
CAAACATTTGCAAATCACGG+TGG - chr8_4:5216402-5216421 Msa1308860:CDS 40.0%
!!! AAACTTGCCGATTTTGGTTG+AGG - chr8_4:5216697-5216716 Msa1308860:CDS 40.0%
GGTGAAACCTCAACCAAAAT+CGG + chr8_4:5216707-5216726 None:intergenic 40.0%
GTCAGAGTCAGAGACTAAAT+GGG - chr8_4:5216756-5216775 Msa1308860:CDS 40.0%
! AGGAGTTTTCAAATGCTAGG+TGG - chr8_4:5216780-5216799 Msa1308860:CDS 40.0%
! GTCGAATGCACGGATTTTAT+TGG - chr8_4:5216889-5216908 Msa1308860:CDS 40.0%
ATCTGTATCAACAGGTTCTG+GGG + chr8_4:5217110-5217129 None:intergenic 40.0%
GATCTGTATCAACAGGTTCT+GGG + chr8_4:5217111-5217130 None:intergenic 40.0%
AGATCTGTATCAACAGGTTC+TGG + chr8_4:5217112-5217131 None:intergenic 40.0%
! AGAACGGTTTATGTACCGAT+AGG - chr8_4:5217136-5217155 Msa1308860:intron 40.0%
GGTCAAAACAAATCTGAGTC+CGG - chr8_4:5217157-5217176 Msa1308860:intron 40.0%
ATTGAGAGATCTTCCAGGAA+AGG + chr8_4:5217214-5217233 None:intergenic 40.0%
! AATTGGACTTGGTTTCTTCC+CGG + chr8_4:5217245-5217264 None:intergenic 40.0%
TCTTGAGGGGAAAGAACAAT+TGG + chr8_4:5217262-5217281 None:intergenic 40.0%
GTTGAAGAACTGAATGACAC+GGG - chr8_4:5217289-5217308 Msa1308860:intron 40.0%
TTGAAGAACTGAATGACACG+GGG - chr8_4:5217290-5217309 Msa1308860:intron 40.0%
AATTCCATCTCGTAATCGGA+CGG + chr8_4:5217740-5217759 None:intergenic 40.0%
! CCGATTACGAGATGGAATTT+TGG - chr8_4:5217741-5217760 Msa1308860:intron 40.0%
! TTACTCAAACGACTTGGATG+TGG - chr8_4:5217781-5217800 Msa1308860:intron 40.0%
! CATTGGGAGTGTATATCTCT+CGG - chr8_4:5217807-5217826 Msa1308860:intron 40.0%
TGCTATGAAGGTTATGGACA+AGG - chr8_4:5217855-5217874 Msa1308860:intron 40.0%
CCATCACCAAACAAGAGAAA+CGG + chr8_4:5217990-5218009 None:intergenic 40.0%
!! TTGGTGATGGAATATTGTCC+CGG - chr8_4:5218000-5218019 Msa1308860:CDS 40.0%
ATTTCTCTGAATATGCTGCG+CGG - chr8_4:5218064-5218083 Msa1308860:CDS 40.0%
! CAAAGCAGATTTTCATGAGG+GGG + chr8_4:5218139-5218158 None:intergenic 40.0%
! GCAAAGCAGATTTTCATGAG+GGG + chr8_4:5218140-5218159 None:intergenic 40.0%
! TGTTACATCTGGAAGGCTTT+TGG - chr8_4:5218341-5218360 Msa1308860:CDS 40.0%
! GTTACATCTGGAAGGCTTTT+GGG - chr8_4:5218342-5218361 Msa1308860:CDS 40.0%
ATTGAATGGCAACACATGGT+TGG - chr8_4:5218430-5218449 Msa1308860:CDS 40.0%
ATTGCACAACCTTCATTGGA+GGG + chr8_4:5218523-5218542 None:intergenic 40.0%
TATTGCACAACCTTCATTGG+AGG + chr8_4:5218524-5218543 None:intergenic 40.0%
GCAATACTATTTGCTCCTGA+AGG - chr8_4:5218538-5218557 Msa1308860:CDS 40.0%
AGAAACGTTATATCCTGTCC+AGG - chr8_4:5218584-5218603 Msa1308860:CDS 40.0%
GAAGATATTCAAGAGCAAGC+AGG + chr8_4:5218894-5218913 None:intergenic 40.0%
! TCTCGAACCAACACATTTTC+AGG + chr8_4:5218949-5218968 None:intergenic 40.0%
AGGCAAAACAGTACATCTGA+GGG + chr8_4:5219007-5219026 None:intergenic 40.0%
TAGGCAAAACAGTACATCTG+AGG + chr8_4:5219008-5219027 None:intergenic 40.0%
! GTTTTGCCTACTCTTGTTAG+AGG - chr8_4:5219018-5219037 Msa1308860:CDS 40.0%
GGTTGTATGCATACTGATGT+TGG + chr8_4:5219108-5219127 None:intergenic 40.0%
AGACGAGGAATAAAACATGC+AGG + chr8_4:5219129-5219148 None:intergenic 40.0%
!! TTTTTCTGAGGAAAGAGACG+AGG + chr8_4:5219144-5219163 None:intergenic 40.0%
! CCTTCCCCTTTGATAATTTC+AGG + chr8_4:5219288-5219307 None:intergenic 40.0%
CCTGAAATTATCAAAGGGGA+AGG - chr8_4:5219285-5219304 Msa1308860:exon 40.0%
ATTATCAAAGGGGAAGGTCA+TGG - chr8_4:5219291-5219310 Msa1308860:exon 40.0%
TACGGTAAAACCCCTTTCAA+AGG - chr8_4:5219363-5219382 Msa1308860:intron 40.0%
ACGGTAAAACCCCTTTCAAA+GGG - chr8_4:5219364-5219383 Msa1308860:intron 40.0%
TAAAACCCCTTTCAAAGGGT+CGG - chr8_4:5219368-5219387 Msa1308860:intron 40.0%
AAGCAGCATCCTTTCTTTGA+AGG - chr8_4:5219543-5219562 Msa1308860:intron 40.0%
!! GTGTAAACTGGGCATTGATT+AGG - chr8_4:5219565-5219584 Msa1308860:intron 40.0%
CAGTACTAGTAAGAGGATGT+CGG - chr8_4:5219689-5219708 Msa1308860:intron 40.0%
AGTACTAGTAAGAGGATGTC+GGG - chr8_4:5219690-5219709 Msa1308860:intron 40.0%
ATGCATGTTTGGTATCACCG+TGG - chr8_4:5216305-5216324 Msa1308860:CDS 45.0%
TGCATGTTTGGTATCACCGT+GGG - chr8_4:5216306-5216325 Msa1308860:CDS 45.0%
!!! TCCTCGAAACTTGCCGATTT+TGG - chr8_4:5216691-5216710 Msa1308860:CDS 45.0%
ACCAAAATCGGCAAGTTTCG+AGG + chr8_4:5216695-5216714 None:intergenic 45.0%
GGTTGAGGTTTCACCACATA+CGG - chr8_4:5216712-5216731 Msa1308860:CDS 45.0%
GGTCAGAGTCAGAGACTAAA+TGG - chr8_4:5216755-5216774 Msa1308860:CDS 45.0%
! GGCAGGAGTTTTCAAATGCT+AGG - chr8_4:5216777-5216796 Msa1308860:CDS 45.0%
TGAATCAATTGTCGCAGGGA+AGG - chr8_4:5216819-5216838 Msa1308860:CDS 45.0%
GAATCAATTGTCGCAGGGAA+GGG - chr8_4:5216820-5216839 Msa1308860:CDS 45.0%
CTATCTCCTTTGAGCCTACT+CGG - chr8_4:5216954-5216973 Msa1308860:CDS 45.0%
TTTCCTTTCCATGTCCGAGT+AGG + chr8_4:5216971-5216990 None:intergenic 45.0%
!! CTAGCACCGGCAAATAAAGT+CGG + chr8_4:5217082-5217101 None:intergenic 45.0%
! TCTGTATCAACAGGTTCTGG+GGG + chr8_4:5217109-5217128 None:intergenic 45.0%
GATCTCTCAATCCGTGTTAC+CGG - chr8_4:5217223-5217242 Msa1308860:intron 45.0%
ATCTCTCAATCCGTGTTACC+GGG - chr8_4:5217224-5217243 Msa1308860:intron 45.0%
TTGGTTTCTTCCCGGTAACA+CGG + chr8_4:5217237-5217256 None:intergenic 45.0%
GGGGAAAGAACAATTGGACT+TGG + chr8_4:5217256-5217275 None:intergenic 45.0%
! AACATATCCTCGCCTTTTGC+AGG - chr8_4:5217313-5217332 Msa1308860:intron 45.0%
! TTTCTTCGGAATCTGGAGCA+AGG + chr8_4:5217372-5217391 None:intergenic 45.0%
TCTTTGCCTCCTACACCTAA+TGG - chr8_4:5217412-5217431 Msa1308860:intron 45.0%
CTTTGCCTCCTACACCTAAT+GGG - chr8_4:5217413-5217432 Msa1308860:intron 45.0%
TAAACTAAGCATGCCATCGC+TGG + chr8_4:5217536-5217555 None:intergenic 45.0%
ATAGCACCAAGGGTAGTGTA+AGG - chr8_4:5217569-5217588 Msa1308860:intron 45.0%
TAGCACCAAGGGTAGTGTAA+GGG - chr8_4:5217570-5217589 Msa1308860:intron 45.0%
TCCAGTTACTGTCATCACTG+AGG + chr8_4:5217651-5217670 None:intergenic 45.0%
AGTAACTGGAGCAACCTTAC+TGG - chr8_4:5217661-5217680 Msa1308860:intron 45.0%
GCTTATTGGCACTACCAGTA+AGG + chr8_4:5217678-5217697 None:intergenic 45.0%
AGTGCCAATAAGCCTCACAA+AGG - chr8_4:5217685-5217704 Msa1308860:intron 45.0%
CTGGGATCATTTCCTTTGTG+AGG + chr8_4:5217700-5217719 None:intergenic 45.0%
CTCACAAAGGAAATGATCCC+AGG - chr8_4:5217698-5217717 Msa1308860:intron 45.0%
ACAAAGGAAATGATCCCAGG+TGG - chr8_4:5217701-5217720 Msa1308860:intron 45.0%
GACTTGGATGTGGTGACATT+GGG - chr8_4:5217791-5217810 Msa1308860:intron 45.0%
! CAGCTTCTTTCTGCTTGCTA+GGG + chr8_4:5217884-5217903 None:intergenic 45.0%
TCAGCTTCTTTCTGCTTGCT+AGG + chr8_4:5217885-5217904 None:intergenic 45.0%
CACCAAACAAGAGAAACGGT+CGG + chr8_4:5217986-5218005 None:intergenic 45.0%
! CCGTTTCTCTTGTTTGGTGA+TGG - chr8_4:5217987-5218006 Msa1308860:CDS 45.0%
TAAAGTGTGTAGGTCACCTC+CGG + chr8_4:5218022-5218041 None:intergenic 45.0%
GAGGTGACCTACACACTTTA+AGG - chr8_4:5218022-5218041 Msa1308860:CDS 45.0%
!! ACCTACACACTTTAAGGCAG+CGG - chr8_4:5218028-5218047 Msa1308860:CDS 45.0%
TCATTGGAGGGAACAAGGAT+CGG + chr8_4:5218511-5218530 None:intergenic 45.0%
ATCCTTGTTCCCTCCAATGA+AGG - chr8_4:5218511-5218530 Msa1308860:CDS 45.0%
AACCTTCATTGGAGGGAACA+AGG + chr8_4:5218516-5218535 None:intergenic 45.0%
!! AATGTGTTGGTTCGAGACGA+TGG - chr8_4:5218952-5218971 Msa1308860:CDS 45.0%
ATGACGGTGACCCTTCAAAA+CGG - chr8_4:5219043-5219062 Msa1308860:CDS 45.0%
!! GATGTTGGCTCAATACAAGC+AGG + chr8_4:5219093-5219112 None:intergenic 45.0%
TACCGACGAAGGACATAGAA+CGG + chr8_4:5219248-5219267 None:intergenic 45.0%
! TTCAGGAGCAAGGTATTCGT+GGG + chr8_4:5219271-5219290 None:intergenic 45.0%
! TTTCAGGAGCAAGGTATTCG+TGG + chr8_4:5219272-5219291 None:intergenic 45.0%
AAAACCCCTTTCAAAGGGTC+GGG - chr8_4:5219369-5219388 Msa1308860:intron 45.0%
! CTACGTTGAAAAGCGTAGCA+CGG + chr8_4:5219398-5219417 None:intergenic 45.0%
! GCTACGCTTTTCAACGTAGT+AGG - chr8_4:5219399-5219418 Msa1308860:intron 45.0%
ATAACTGGTCGCAGGTGATT+CGG + chr8_4:5219442-5219461 None:intergenic 45.0%
TTAACCCCAAGACGATGTTG+CGG + chr8_4:5219504-5219523 None:intergenic 45.0%
! GAAAGGATGCTGCTTGATCT+CGG + chr8_4:5219538-5219557 None:intergenic 45.0%
GTACTAGTAAGAGGATGTCG+GGG - chr8_4:5219691-5219710 Msa1308860:intron 45.0%
GAAGTCTGGGGGTAAATATC+TGG - chr8_4:5219725-5219744 Msa1308860:intron 45.0%
!!! AAATTATTAATCTTAATTTT+TGG - chr8_4:5219989-5220008 Msa1308860:intron 5.0%
TGAGGTTTCACCACATACGG+CGG - chr8_4:5216715-5216734 Msa1308860:CDS 50.0%
GAGTCAGAGACTAAATGGGC+AGG - chr8_4:5216760-5216779 Msa1308860:CDS 50.0%
GGATGTGCCTATGACACGTT+TGG - chr8_4:5216841-5216860 Msa1308860:CDS 50.0%
ATCGAGGCCAAACGTGTCAT+AGG + chr8_4:5216851-5216870 None:intergenic 50.0%
TTTGGCCTCGATCAGAGAAG+TGG - chr8_4:5216859-5216878 Msa1308860:CDS 50.0%
TGGCTCAGTTGTCGAATGCA+CGG - chr8_4:5216879-5216898 Msa1308860:CDS 50.0%
GGCTCAAAGGAGATAGACTC+AGG + chr8_4:5216950-5216969 None:intergenic 50.0%
GGAAAGCAGCGATTCGTTTG+AGG - chr8_4:5217048-5217067 Msa1308860:CDS 50.0%
AGCAGCGATTCGTTTGAGGA+CGG - chr8_4:5217052-5217071 Msa1308860:CDS 50.0%
! GGCGATCCGACTTTATTTGC+CGG - chr8_4:5217073-5217092 Msa1308860:intron 50.0%
TCCAGGAAAGGACCCTTCAT+GGG + chr8_4:5217202-5217221 None:intergenic 50.0%
TTCCAGGAAAGGACCCTTCA+TGG + chr8_4:5217203-5217222 None:intergenic 50.0%
! CACGGATTGAGAGATCTTCC+AGG + chr8_4:5217219-5217238 None:intergenic 50.0%
GCATTCCCATTAGGTGTAGG+AGG + chr8_4:5217421-5217440 None:intergenic 50.0%
CTGGCATTCCCATTAGGTGT+AGG + chr8_4:5217424-5217443 None:intergenic 50.0%
!! TGTGGACTGGCATTCCCATT+AGG + chr8_4:5217430-5217449 None:intergenic 50.0%
AGTGATGCAATGACCAGCGA+TGG - chr8_4:5217520-5217539 Msa1308860:intron 50.0%
AGCACCAAGGGTAGTGTAAG+GGG - chr8_4:5217571-5217590 Msa1308860:intron 50.0%
ATCACCCCTTACACTACCCT+TGG + chr8_4:5217578-5217597 None:intergenic 50.0%
GCCTCAGTGATGACAGTAAC+TGG - chr8_4:5217647-5217666 Msa1308860:intron 50.0%
GCAAGGATAGCATTCCACCT+GGG + chr8_4:5217718-5217737 None:intergenic 50.0%
! CGACTTGGATGTGGTGACAT+TGG - chr8_4:5217790-5217809 Msa1308860:intron 50.0%
GTATATCTCTCGGAGCTGAG+TGG - chr8_4:5217817-5217836 Msa1308860:intron 50.0%
GAAGCTGACTAGAGCACAGA+CGG - chr8_4:5217897-5217916 Msa1308860:CDS 50.0%
GACCGACCGTTTCTCTTGTT+TGG - chr8_4:5217981-5218000 Msa1308860:CDS 50.0%
! GTGATGGAATATTGTCCCGG+AGG - chr8_4:5218003-5218022 Msa1308860:CDS 50.0%
AAAGTGTGTAGGTCACCTCC+GGG + chr8_4:5218021-5218040 None:intergenic 50.0%
! GCAACACATGGTTGGTACCA+AGG - chr8_4:5218438-5218457 Msa1308860:CDS 50.0%
! CACATGGTTGGTACCAAGGA+AGG - chr8_4:5218442-5218461 Msa1308860:CDS 50.0%
! ATGGTTGGTACCAAGGAAGG+AGG - chr8_4:5218445-5218464 Msa1308860:CDS 50.0%
ATTGGAGGGAACAAGGATCG+GGG + chr8_4:5218509-5218528 None:intergenic 50.0%
CATTGGAGGGAACAAGGATC+GGG + chr8_4:5218510-5218529 None:intergenic 50.0%
ATATCCTGTCCAGGCTTTGC+TGG - chr8_4:5218593-5218612 Msa1308860:CDS 50.0%
CATCACTTTCCAGCAAAGCC+TGG + chr8_4:5218605-5218624 None:intergenic 50.0%
CAGGCTTTGCTGGAAAGTGA+TGG - chr8_4:5218603-5218622 Msa1308860:CDS 50.0%
TGACGGTGACCCTTCAAAAC+GGG - chr8_4:5219044-5219063 Msa1308860:CDS 50.0%
!! AACAAGCTCTGGAAGTCTGC+TGG + chr8_4:5219208-5219227 None:intergenic 50.0%
ACCGACGAAGGACATAGAAC+GGG + chr8_4:5219247-5219266 None:intergenic 50.0%
! GTCATGGAAGTGCAGTTGAC+TGG - chr8_4:5219307-5219326 Msa1308860:five_prime_UTR 50.0%
! ATGGAAGTGCAGTTGACTGG+TGG - chr8_4:5219310-5219329 Msa1308860:five_prime_UTR 50.0%
! GCAGTTGACTGGTGGACATT+TGG - chr8_4:5219318-5219337 Msa1308860:five_prime_UTR 50.0%
! GTTTCCCGACCCTTTGAAAG+GGG + chr8_4:5219376-5219395 None:intergenic 50.0%
! GGTTTCCCGACCCTTTGAAA+GGG + chr8_4:5219377-5219396 None:intergenic 50.0%
TAACTGGTCGCAGGTGATTC+GGG + chr8_4:5219441-5219460 None:intergenic 50.0%
AAAGAGCCGCAACATCGTCT+TGG - chr8_4:5219495-5219514 Msa1308860:intron 50.0%
AAGAGCCGCAACATCGTCTT+GGG - chr8_4:5219496-5219515 Msa1308860:intron 50.0%
CATCGTCTTGGGGTTAAGAG+AGG - chr8_4:5219507-5219526 Msa1308860:intron 50.0%
!! GGCTCATTTTCCACTGGTCT+TGG + chr8_4:5219612-5219631 None:intergenic 50.0%
ACTGGTGGTCCAACCTTCAT+TGG + chr8_4:5219651-5219670 None:intergenic 50.0%
! GGGTTGGCAGTACTAGTAAG+AGG - chr8_4:5219682-5219701 Msa1308860:intron 50.0%
GATTAGGTACAGGCAGCTGA+TGG - chr8_4:5220027-5220046 Msa1308860:five_prime_UTR 50.0%
CTTACAGTTGCCGCCGTATG+TGG + chr8_4:5216728-5216747 None:intergenic 55.0%
TACGGCGGCAACTGTAAGAG+AGG - chr8_4:5216730-5216749 Msa1308860:CDS 55.0%
GCGGCAACTGTAAGAGAGGT+AGG - chr8_4:5216734-5216753 Msa1308860:CDS 55.0%
CTGAGCCACTTCTCTGATCG+AGG + chr8_4:5216867-5216886 None:intergenic 55.0%
CCATGTCCGAGTAGGCTCAA+AGG + chr8_4:5216963-5216982 None:intergenic 55.0%
CCTTTGAGCCTACTCGGACA+TGG - chr8_4:5216960-5216979 Msa1308860:CDS 55.0%
GAGCCTACTCGGACATGGAA+AGG - chr8_4:5216965-5216984 Msa1308860:CDS 55.0%
! TTCTGGGGGATGACTAGCAC+CGG + chr8_4:5217095-5217114 None:intergenic 55.0%
TCGAGAACCTGCAAAAGGCG+AGG + chr8_4:5217323-5217342 None:intergenic 55.0%
GACGCTCGAGAACCTGCAAA+AGG + chr8_4:5217328-5217347 None:intergenic 55.0%
AGCCGTGCAAGTGATAGCAG+TGG - chr8_4:5217625-5217644 Msa1308860:intron 55.0%
GGCCACTGCTATCACTTGCA+CGG + chr8_4:5217630-5217649 None:intergenic 55.0%
GGCAAGGATAGCATTCCACC+TGG + chr8_4:5217719-5217738 None:intergenic 55.0%
CATCTCGTAATCGGACGGCA+AGG + chr8_4:5217735-5217754 None:intergenic 55.0%
CTTGCCGTCCGATTACGAGA+TGG - chr8_4:5217733-5217752 Msa1308860:intron 55.0%
TCTCGGAGCTGAGTGGAACT+CGG - chr8_4:5217824-5217843 Msa1308860:intron 55.0%
GCCGCTGCCTTAAAGTGTGT+AGG + chr8_4:5218032-5218051 None:intergenic 55.0%
!! ACTTTAAGGCAGCGGCAACC+TGG - chr8_4:5218036-5218055 Msa1308860:CDS 55.0%
!! CTTTAAGGCAGCGGCAACCT+GGG - chr8_4:5218037-5218056 Msa1308860:CDS 55.0%
TTGGAGGGAACAAGGATCGG+GGG + chr8_4:5218508-5218527 None:intergenic 55.0%
CTTTCCAGCAAAGCCTGGAC+AGG + chr8_4:5218600-5218619 None:intergenic 55.0%
!! CACCACCAGCCCGTTTTGAA+GGG + chr8_4:5219056-5219075 None:intergenic 55.0%
AGGAAGCCAAGAGCTGAACC+TGG - chr8_4:5219174-5219193 Msa1308860:CDS 55.0%
GGAAGCCAAGAGCTGAACCT+GGG - chr8_4:5219175-5219194 Msa1308860:CDS 55.0%
GGAAACCCAGGTTCAGCTCT+TGG + chr8_4:5219183-5219202 None:intergenic 55.0%
AGTCTGCTGGAAGGAAACCC+AGG + chr8_4:5219195-5219214 None:intergenic 55.0%
!! AGCTCTGGAAGTCTGCTGGA+AGG + chr8_4:5219204-5219223 None:intergenic 55.0%
GTAGGCTCAGCAACAAGCTC+TGG + chr8_4:5219219-5219238 None:intergenic 55.0%
GACATAGAACGGGCAGCAGT+AGG + chr8_4:5219237-5219256 None:intergenic 55.0%
GCCCGTTCTATGTCCTTCGT+CGG - chr8_4:5219243-5219262 Msa1308860:CDS 55.0%
!! GTATTCGTGGGTACCGACGA+AGG + chr8_4:5219259-5219278 None:intergenic 55.0%
CGGTTTCCCGACCCTTTGAA+AGG + chr8_4:5219378-5219397 None:intergenic 55.0%
TGCGACCAGTTATGCCAGCA+GGG - chr8_4:5219449-5219468 Msa1308860:intron 55.0%
CAGATCCCTGCTGGCATAAC+TGG + chr8_4:5219457-5219476 None:intergenic 55.0%
GCTCTTTCACGAGTAAGCCG+CGG + chr8_4:5219482-5219501 None:intergenic 55.0%
AGAGCCGCAACATCGTCTTG+GGG - chr8_4:5219497-5219516 Msa1308860:intron 55.0%
!! ACTGGTCTTGGCACTTCTGG+TGG + chr8_4:5219600-5219619 None:intergenic 55.0%
!! ACCAGAAGTGCCAAGACCAG+TGG - chr8_4:5219599-5219618 Msa1308860:intron 55.0%
!! TCCACTGGTCTTGGCACTTC+TGG + chr8_4:5219603-5219622 None:intergenic 55.0%
!! CCAACCTTCATTGGTGGTGG+CGG + chr8_4:5219642-5219661 None:intergenic 55.0%
GGTCCAACCTTCATTGGTGG+TGG + chr8_4:5219645-5219664 None:intergenic 55.0%
GGTGGTCCAACCTTCATTGG+TGG + chr8_4:5219648-5219667 None:intergenic 55.0%
! GGACCACCAGTTGATGCTGT+CGG - chr8_4:5219660-5219679 Msa1308860:intron 55.0%
! GACCACCAGTTGATGCTGTC+GGG - chr8_4:5219661-5219680 Msa1308860:intron 55.0%
! ACCACCAGTTGATGCTGTCG+GGG - chr8_4:5219662-5219681 Msa1308860:intron 55.0%
CGGTGGCTCACTGTAACCCA+CGG + chr8_4:5216325-5216344 None:intergenic 60.0%
GCCCATGAAGGGTCCTTTCC+TGG - chr8_4:5217198-5217217 Msa1308860:intron 60.0%
GGTGACCCTTCAAAACGGGC+TGG - chr8_4:5219048-5219067 Msa1308860:CDS 60.0%
!! GACCCTTCAAAACGGGCTGG+TGG - chr8_4:5219051-5219070 Msa1308860:CDS 60.0%
! GCACCACCAGCCCGTTTTGA+AGG + chr8_4:5219057-5219076 None:intergenic 60.0%
CTGCTGGCATAACTGGTCGC+AGG + chr8_4:5219450-5219469 None:intergenic 60.0%
CTGCGACCAGTTATGCCAGC+AGG - chr8_4:5219448-5219467 Msa1308860:intron 60.0%
!! TTCATTGGTGGTGGCGGTGG+CGG + chr8_4:5219636-5219655 None:intergenic 60.0%
!! ACCTTCATTGGTGGTGGCGG+TGG + chr8_4:5219639-5219658 None:intergenic 60.0%
CCGCCACCACCAATGAAGGT+TGG - chr8_4:5219639-5219658 Msa1308860:intron 60.0%
ACCCCGACAGCATCAACTGG+TGG + chr8_4:5219666-5219685 None:intergenic 60.0%
CCAACCCCGACAGCATCAAC+TGG + chr8_4:5219669-5219688 None:intergenic 60.0%
! CCAGTTGATGCTGTCGGGGT+TGG - chr8_4:5219666-5219685 Msa1308860:intron 60.0%
GCCAGCAGGGATCTGATCCG+CGG - chr8_4:5219462-5219481 Msa1308860:intron 65.0%
! GGCGGCGGCTCATTTTCCAC+TGG + chr8_4:5219618-5219637 None:intergenic 65.0%
GCCACCGCCACCACCAATGA+AGG - chr8_4:5219635-5219654 Msa1308860:intron 65.0%
GCCGCGGATCAGATCCCTGC+TGG + chr8_4:5219466-5219485 None:intergenic 70.0%
!! ATTGGTGGTGGCGGTGGCGG+CGG + chr8_4:5219633-5219652 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr8_4 gene 5215830 5220132 5215830 ID=Msa1308860;Name=Msa1308860
chr8_4 mRNA 5215830 5220132 5215830 ID=Msa1308860-mRNA-1;Parent=Msa1308860;Name=Msa1308860-mRNA-1;_AED=0.03;_eAED=0.03;_QI=168|1|1|1|0.5|0.33|3|368|771
chr8_4 exon 5215830 5217089 5215830 ID=Msa1308860-mRNA-1:exon:1658;Parent=Msa1308860-mRNA-1
chr8_4 exon 5217877 5219351 5217877 ID=Msa1308860-mRNA-1:exon:1657;Parent=Msa1308860-mRNA-1
chr8_4 exon 5220016 5220132 5220016 ID=Msa1308860-mRNA-1:exon:1656;Parent=Msa1308860-mRNA-1
chr8_4 five_prime_UTR 5220016 5220132 5220016 ID=Msa1308860-mRNA-1:five_prime_utr;Parent=Msa1308860-mRNA-1
chr8_4 five_prime_UTR 5219301 5219351 5219301 ID=Msa1308860-mRNA-1:five_prime_utr;Parent=Msa1308860-mRNA-1
chr8_4 CDS 5217877 5219300 5217877 ID=Msa1308860-mRNA-1:cds;Parent=Msa1308860-mRNA-1
chr8_4 CDS 5216198 5217089 5216198 ID=Msa1308860-mRNA-1:cds;Parent=Msa1308860-mRNA-1
chr8_4 three_prime_UTR 5215830 5216197 5215830 ID=Msa1308860-mRNA-1:three_prime_utr;Parent=Msa1308860-mRNA-1
Gene Sequence

>Msa1308860

ATGGAGAGGTATTCAGAGTCAAAAATACATCCTCGAAACTTGCCGATTTTGGTTGAGGTTTCACCACATACGGCGGCAACTGTAAGAGAGGTAGGTCAGAGTCAGAGACTAAATGGGCAGGAGTTTTCAAATGCTAGGTGGATTTCAGCTAGAGAATTGAATCAATTGTCGCAGGGAAGGGATGTGCCTATGACACGTTTGGCCTCGATCAGAGAAGTGGCTCAGTTGTCGAATGCACGGATTTTATTGGTTCAAGATGATATGGAATTTGATACTAGAGAGTCTCCTGAGTCTATCTCCTTTGAGCCTACTCGGACATGGAAAGGAAAGACGTCTTTACTTGAAGTTGAAGGAGAAGATCTGATGTATGATGTAGACACATTGAAGGAAAGCAGCGATTCGTTTGAGGACGGCGATCCGACTTTATTTGCCGGTGCTAGTCATCCCCCAGAACCTGTTGATACAGATCTTATGAGAACGGTTTATGTACCGATAGGTCAAAACAAATCTGAGTCCGGATGCTTAATTAAGAACTTGCCCATGAAGGGTCCTTTCCTGGAAGATCTCTCAATCCGTGTTACCGGGAAGAAACCAAGTCCAATTGTTCTTTCCCCTCAAGAAAGTCTTGTTGAAGAACTGAATGACACGGGGAACATATCCTCGCCTTTTGCAGGTTCTCGAGCGTCTCAGAATACTGAGAACTCTCTCCTTGCTCCAGATTCCGAAGAAAAAGAATGTGTTTGGGACGCTTCTTTGCCTCCTACACCTAATGGGAATGCCAGTCCACATAGTAGTATAGATAGTATTGGTGTTGTCAAGGCAATGAGCATTGCTAATAGTTGCGCTAGTACATATCGTAGTGATGCAATGACCAGCGATGGCATGCTTAGTTTAGATAGAAACTTTGATAGCACCAAGGGTAGTGTAAGGGGTGATTCACTTGAGAGTGCAAAAACTAGTGCTAGCCGTGCAAGTGATAGCAGTGGCCTCAGTGATGACAGTAACTGGAGCAACCTTACTGGTAGTGCCAATAAGCCTCACAAAGGAAATGATCCCAGGTGGAATGCTATCCTTGCCGTCCGATTACGAGATGGAATTTTGGGCATGAGTCATTTTCGATTACTCAAACGACTTGGATGTGGTGACATTGGGAGTGTATATCTCTCGGAGCTGAGTGGAACTCGGTGTTATTTTGCTATGAAGGTTATGGACAAGGCGTCCCTAGCAAGCAGAAAGAAGCTGACTAGAGCACAGACGGAGAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTTCCAACTTTGTATACACATTTTGAGACCGACCGTTTCTCTTGTTTGGTGATGGAATATTGTCCCGGAGGTGACCTACACACTTTAAGGCAGCGGCAACCTGGGAAACATTTCTCTGAATATGCTGCGCGATTTTATGCTGCTGAAGTCCTGCTTGCTCTTGAATATCTTCACATGCTTGGAGTTGTGTACAGAGACCTTAAACCTGAAAATGTGTTGGTTCGAGACGATGGTCACATAATGCTTTCAGATTTCGATCTTTCCCTCAGATGTACTGTTTTGCCTACTCTTGTTAGAGGTTATGACGGTGACCCTTCAAAACGGGCTGGTGGTGCATTCTGTGTTCAGCCTGCTTGTATTGAGCCAACATCAGTATGCATACAACCTGCATGTTTTATTCCTCGTCTCTTTCCTCAGAAAAACAAGAAATCAAGGAAGCCAAGAGCTGAACCTGGGTTTCCTTCCAGCAGACTTCCAGAGCTTGTTGCTGAGCCTACTGCTGCCCGTTCTATGTCCTTCGTCGGTACCCACGAATACCTTGCTCCTGAAATTATCAAAGGGGAAGGTCATGGAAGTGCAGTTGACTGGTGGACATTTGGAATATTCTTGCATGAACTGTTATACGGTAAAACCCCTTTCAAAGGGTCGGGAAACCGTGCTACGCTTTTCAACGTAGTAGGTCAGCAGCTCAAATTTCCCGAATCACCTGCGACCAGTTATGCCAGCAGGGATCTGATCCGCGGCTTACTCGTGAAAGAGCCGCAACATCGTCTTGGGGTTAAGAGAGGTGCAACCGAGATCAAGCAGCATCCTTTCTTTGAAGGTGTAAACTGGGCATTGATTAGGTGCAGCACACCACCAGAAGTGCCAAGACCAGTGGAAAATGAGCCGCCGCCACCGCCACCACCAATGAAGGTTGGACCACCAGTTGATGCTGTCGGGGTTGGCAGTACTAGTAAGAGGATGTCGGGGAATAATGAAATGAAGTCTGGGGGTAAATATCTGGATTTTGAGTTCTTTTAG
Protein sequence

>Msa1308860

MERYSESKIHPRNLPILVEVSPHTAATVREVGQSQRLNGQEFSNARWISARELNQLSQGRDVPMTRLASIREVAQLSNARILLVQDDMEFDTRESPESISFEPTRTWKGKTSLLEVEGEDLMYDVDTLKESSDSFEDGDPTLFAGASHPPEPVDTDLMRTVYVPIGQNKSESGCLIKNLPMKGPFLEDLSIRVTGKKPSPIVLSPQESLVEELNDTGNISSPFAGSRASQNTENSLLAPDSEEKECVWDASLPPTPNGNASPHSSIDSIGVVKAMSIANSCASTYRSDAMTSDGMLSLDRNFDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNLTGSANKPHKGNDPRWNAILAVRLRDGILGMSHFRLLKRLGCGDIGSVYLSELSGTRCYFAMKVMDKASLASRKKLTRAQTEREILQLLDHPFLPTLYTHFETDRFSCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCTVLPTLVRGYDGDPSKRAGGAFCVQPACIEPTSVCIQPACFIPRLFPQKNKKSRKPRAEPGFPSSRLPELVAEPTAARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLKFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVENEPPPPPPPMKVGPPVDAVGVGSTSKRMSGNNEMKSGGKYLDFEFF*