Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201010 | RDX74398.1 | 45.263 | 285 | 145 | 5 | 222 | 504 | 2 | 277 | 1.60e-55 | 211 |
| Msa1201010 | RDX74398.1 | 46.749 | 569 | 223 | 10 | 1 | 498 | 1 | 560 | 2.13e-137 | 429 |
| Msa1201010 | RDX74398.1 | 60.169 | 590 | 154 | 13 | 2 | 517 | 290 | 872 | 0.0 | 651 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017390 | Msa1201010 | 0.818483 | 1.914212e-52 | -8.615850e-47 |
| Msa0065550 | Msa1201010 | 0.807800 | 4.233986e-50 | -8.615850e-47 |
| Msa0079110 | Msa1201010 | 0.815611 | 8.461930e-52 | -8.615850e-47 |
| Msa0092410 | Msa1201010 | 0.804658 | 1.943728e-49 | -8.615850e-47 |
| Msa0106620 | Msa1201010 | 0.818447 | 1.950555e-52 | -8.615850e-47 |
| Msa0106710 | Msa1201010 | 0.821883 | 3.186438e-53 | -8.615850e-47 |
| Msa0709120 | Msa1201010 | 0.818840 | 1.588863e-52 | -8.615850e-47 |
| Msa0822500 | Msa1201010 | 0.810797 | 9.638779e-51 | -8.615850e-47 |
| Msa0139670 | Msa1201010 | 0.820545 | 6.480586e-53 | -8.615850e-47 |
| Msa0207350 | Msa1201010 | 0.824246 | 8.956752e-54 | -8.615850e-47 |
| Msa0217700 | Msa1201010 | 0.801740 | 7.806731e-49 | -8.615850e-47 |
| Msa0223330 | Msa1201010 | 0.803931 | 2.753961e-49 | -8.615850e-47 |
| Msa0225220 | Msa1201010 | 0.801499 | 8.750162e-49 | -8.615850e-47 |
| Msa0233370 | Msa1201010 | 0.804314 | 2.293094e-49 | -8.615850e-47 |
| Msa0382370 | Msa1201010 | 0.824561 | 7.550179e-54 | -8.615850e-47 |
| Msa0432160 | Msa1201010 | 0.822244 | 2.628015e-53 | -8.615850e-47 |
| Msa0450400 | Msa1201010 | -0.836988 | 6.776658e-57 | -8.615850e-47 |
| Msa0455740 | Msa1201010 | 0.814891 | 1.222971e-51 | -8.615850e-47 |
| Msa0467100 | Msa1201010 | 0.807940 | 3.955018e-50 | -8.615850e-47 |
| Msa0476680 | Msa1201010 | 0.824609 | 7.357708e-54 | -8.615850e-47 |
| Msa0481970 | Msa1201010 | 0.818197 | 2.222576e-52 | -8.615850e-47 |
| Msa1034500 | Msa1201010 | 0.817511 | 3.175037e-52 | -8.615850e-47 |
| Msa1089450 | Msa1201010 | 0.801575 | 8.439506e-49 | -8.615850e-47 |
| Msa0241140 | Msa1201010 | 0.809933 | 1.480963e-50 | -8.615850e-47 |
| Msa0296790 | Msa1201010 | 0.801798 | 7.596824e-49 | -8.615850e-47 |
| Msa0296820 | Msa1201010 | 0.803918 | 2.771829e-49 | -8.615850e-47 |
| Msa0317970 | Msa1201010 | 0.805605 | 1.231732e-49 | -8.615850e-47 |
| Msa0321690 | Msa1201010 | 0.806207 | 9.202041e-50 | -8.615850e-47 |
| Msa0322900 | Msa1201010 | 0.812659 | 3.793947e-51 | -8.615850e-47 |
| Msa0341840 | Msa1201010 | 0.808575 | 2.896058e-50 | -8.615850e-47 |
| Msa0342010 | Msa1201010 | 0.809645 | 1.707709e-50 | -8.615850e-47 |
| Msa1201010 | Msa1208790 | 0.800971 | 1.121955e-48 | -8.615850e-47 |
| Msa1201010 | Msa1226270 | 0.817298 | 3.545091e-52 | -8.615850e-47 |
| Msa1201010 | Msa1234620 | 0.810643 | 1.040938e-50 | -8.615850e-47 |
| Msa1201010 | Msa1243870 | 0.827011 | 1.979573e-54 | -8.615850e-47 |
| Msa1201010 | Msa1258980 | 0.804427 | 2.171133e-49 | -8.615850e-47 |
| Msa1201010 | Msa1265590 | 0.845553 | 3.778813e-59 | -8.615850e-47 |
| Msa1201010 | Msa1271130 | 0.807882 | 4.067916e-50 | -8.615850e-47 |
| Msa1201010 | Msa1283740 | 0.800198 | 1.612841e-48 | -8.615850e-47 |
| Msa1201010 | Msa1330630 | 0.804142 | 2.489889e-49 | -8.615850e-47 |
| Msa1201010 | Msa1332050 | 0.806666 | 7.363249e-50 | -8.615850e-47 |
| Msa1201010 | Msa1369690 | 0.805267 | 1.449490e-49 | -8.615850e-47 |
| Msa1201010 | Msa1418240 | 0.810005 | 1.428979e-50 | -8.615850e-47 |
| Msa1201010 | Msa1422810 | 0.804211 | 2.408395e-49 | -8.615850e-47 |
| Msa1201010 | Msa1444120 | 0.803526 | 3.341866e-49 | -8.615850e-47 |
| Msa1201010 | Msa1462360 | 0.819070 | 1.408351e-52 | -8.615850e-47 |
| Msa0485240 | Msa1201010 | 0.815703 | 8.069078e-52 | -8.615850e-47 |
| Msa0521010 | Msa1201010 | 0.828030 | 1.127494e-54 | -8.615850e-47 |
| Msa0897200 | Msa1201010 | 0.801241 | 9.879341e-49 | -8.615850e-47 |
| Msa0902830 | Msa1201010 | 0.800063 | 1.717686e-48 | -8.615850e-47 |
| Msa0921420 | Msa1201010 | 0.806658 | 7.393053e-50 | -8.615850e-47 |
| Msa0934140 | Msa1201010 | 0.806591 | 7.636430e-50 | -8.615850e-47 |
| Msa0960390 | Msa1201010 | 0.804035 | 2.620671e-49 | -8.615850e-47 |
| Msa0971650 | Msa1201010 | 0.801068 | 1.071662e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201010 | MtrunA17_Chr8g0370921 | 97.377 | 305 | 1 | 2 | 213 | 517 | 8 | 305 | 0.0 | 593 |
| Msa1201010 | MtrunA17_Chr8g0370921 | 37.687 | 268 | 107 | 5 | 4 | 213 | 19 | 284 | 5.03e-42 | 152 |
| Msa1201010 | MtrunA17_Chr8g0370901 | 75.281 | 267 | 12 | 3 | 1 | 213 | 1 | 267 | 7.94e-130 | 379 |
| Msa1201010 | MtrunA17_Chr8g0370901 | 45.763 | 295 | 147 | 5 | 224 | 516 | 4 | 287 | 7.41e-73 | 233 |
| Msa1201010 | MtrunA17_Chr5g0406361 | 64.474 | 304 | 101 | 5 | 220 | 517 | 13 | 315 | 9.74e-128 | 375 |
| Msa1201010 | MtrunA17_Chr5g0406361 | 32.374 | 278 | 120 | 5 | 4 | 213 | 17 | 294 | 2.84e-32 | 125 |
| Msa1201010 | MtrunA17_Chr8g0370891 | 69.403 | 268 | 26 | 3 | 1 | 212 | 1 | 268 | 2.60e-117 | 347 |
| Msa1201010 | MtrunA17_Chr8g0370891 | 46.284 | 296 | 148 | 5 | 223 | 516 | 3 | 289 | 7.01e-73 | 233 |
| Msa1201010 | MtrunA17_Chr8g0370881 | 65.056 | 269 | 38 | 3 | 1 | 213 | 1 | 269 | 4.22e-105 | 316 |
| Msa1201010 | MtrunA17_Chr8g0370881 | 46.465 | 297 | 148 | 5 | 222 | 516 | 2 | 289 | 1.52e-69 | 224 |
| Msa1201010 | MtrunA17_Chr5g0406531 | 53.933 | 267 | 65 | 4 | 1 | 213 | 1 | 263 | 1.40e-82 | 258 |
| Msa1201010 | MtrunA17_Chr5g0406531 | 42.761 | 297 | 153 | 6 | 222 | 516 | 2 | 283 | 4.46e-57 | 191 |
| Msa1201010 | MtrunA17_Chr5g0406601 | 55.682 | 264 | 59 | 6 | 4 | 213 | 5 | 264 | 3.91e-81 | 254 |
| Msa1201010 | MtrunA17_Chr5g0406601 | 42.088 | 297 | 155 | 6 | 222 | 516 | 3 | 284 | 2.97e-53 | 181 |
| Msa1201010 | MtrunA17_Chr5g0406501 | 52.434 | 267 | 70 | 3 | 1 | 213 | 1 | 264 | 1.60e-80 | 253 |
| Msa1201010 | MtrunA17_Chr5g0406501 | 41.892 | 296 | 158 | 4 | 222 | 516 | 2 | 284 | 6.82e-58 | 194 |
| Msa1201010 | MtrunA17_Chr5g0406421 | 54.373 | 263 | 62 | 5 | 5 | 213 | 6 | 264 | 2.37e-80 | 252 |
| Msa1201010 | MtrunA17_Chr5g0406421 | 41.751 | 297 | 156 | 6 | 222 | 516 | 3 | 284 | 1.12e-55 | 188 |
| Msa1201010 | MtrunA17_Chr5g0406411 | 54.373 | 263 | 62 | 5 | 5 | 213 | 6 | 264 | 1.71e-79 | 250 |
| Msa1201010 | MtrunA17_Chr5g0406411 | 43.098 | 297 | 152 | 6 | 222 | 516 | 3 | 284 | 1.78e-56 | 190 |
| Msa1201010 | MtrunA17_Chr5g0406401 | 53.409 | 264 | 65 | 4 | 4 | 213 | 5 | 264 | 5.32e-79 | 249 |
| Msa1201010 | MtrunA17_Chr5g0406401 | 43.098 | 297 | 152 | 6 | 222 | 516 | 3 | 284 | 3.77e-58 | 194 |
| Msa1201010 | MtrunA17_Chr5g0406391 | 52.852 | 263 | 66 | 5 | 5 | 213 | 6 | 264 | 8.82e-78 | 246 |
| Msa1201010 | MtrunA17_Chr5g0406391 | 43.243 | 296 | 153 | 6 | 222 | 516 | 3 | 284 | 5.37e-57 | 191 |
| Msa1201010 | MtrunA17_Chr5g0406371 | 53.030 | 264 | 62 | 6 | 5 | 213 | 6 | 262 | 3.30e-76 | 241 |
| Msa1201010 | MtrunA17_Chr5g0406371 | 41.751 | 297 | 154 | 7 | 222 | 516 | 3 | 282 | 5.25e-54 | 183 |
| Msa1201010 | MtrunA17_Chr5g0406511 | 50.943 | 265 | 71 | 4 | 4 | 213 | 5 | 265 | 9.69e-76 | 240 |
| Msa1201010 | MtrunA17_Chr5g0406511 | 40.541 | 296 | 162 | 4 | 222 | 516 | 3 | 285 | 4.27e-53 | 181 |
| Msa1201010 | MtrunA17_Chr5g0406561 | 50.570 | 263 | 76 | 2 | 5 | 213 | 6 | 268 | 9.85e-75 | 238 |
| Msa1201010 | MtrunA17_Chr5g0406561 | 41.077 | 297 | 162 | 5 | 222 | 516 | 3 | 288 | 5.49e-56 | 189 |
| Msa1201010 | MtrunA17_Chr5g0406481 | 49.811 | 265 | 74 | 4 | 4 | 213 | 5 | 265 | 1.40e-73 | 234 |
| Msa1201010 | MtrunA17_Chr5g0406481 | 39.527 | 296 | 165 | 4 | 222 | 516 | 3 | 285 | 5.05e-51 | 176 |
| Msa1201010 | MtrunA17_Chr5g0406471 | 56.213 | 169 | 43 | 4 | 68 | 213 | 4 | 164 | 6.40e-49 | 167 |
| Msa1201010 | MtrunA17_Chr5g0406471 | 38.693 | 199 | 103 | 5 | 321 | 517 | 4 | 185 | 1.45e-27 | 109 |
| Msa1201010 | MtrunA17_Chr4g0035251 | 35.548 | 301 | 178 | 7 | 222 | 516 | 12 | 302 | 3.37e-45 | 160 |
| Msa1201010 | MtrunA17_Chr4g0035251 | 22.388 | 268 | 149 | 7 | 5 | 213 | 15 | 282 | 7.25e-13 | 69.3 |
| Msa1201010 | MtrunA17_Chr5g0406631 | 36.824 | 296 | 176 | 6 | 227 | 516 | 14 | 304 | 1.06e-44 | 159 |
| Msa1201010 | MtrunA17_Chr5g0406631 | 29.688 | 256 | 115 | 8 | 7 | 202 | 14 | 264 | 2.67e-18 | 85.9 |
| Msa1201010 | MtrunA17_Chr4g0035221 | 38.127 | 299 | 167 | 8 | 223 | 516 | 10 | 295 | 9.89e-44 | 156 |
| Msa1201010 | MtrunA17_Chr4g0035221 | 29.502 | 261 | 129 | 5 | 6 | 211 | 13 | 273 | 2.91e-24 | 102 |
| Msa1201010 | MtrunA17_Chr8g0370861 | 35.621 | 306 | 154 | 9 | 222 | 516 | 9 | 282 | 1.77e-41 | 150 |
| Msa1201010 | MtrunA17_Chr8g0370861 | 28.216 | 241 | 109 | 6 | 7 | 185 | 14 | 252 | 3.48e-17 | 82.0 |
| Msa1201010 | MtrunA17_Chr4g0035261 | 36.156 | 307 | 182 | 7 | 215 | 516 | 3 | 300 | 1.00e-40 | 149 |
| Msa1201010 | MtrunA17_Chr4g0035261 | 26.154 | 260 | 128 | 7 | 6 | 207 | 14 | 267 | 1.05e-13 | 72.0 |
| Msa1201010 | MtrunA17_Chr4g0035231 | 36.156 | 307 | 180 | 7 | 213 | 516 | 2 | 295 | 5.00e-40 | 146 |
| Msa1201010 | MtrunA17_Chr4g0035231 | 27.953 | 254 | 125 | 5 | 6 | 201 | 13 | 266 | 9.47e-20 | 89.7 |
| Msa1201010 | MtrunA17_Chr3g0144781 | 32.542 | 295 | 189 | 6 | 223 | 516 | 10 | 295 | 2.98e-37 | 139 |
| Msa1201010 | MtrunA17_Chr3g0144781 | 27.068 | 266 | 131 | 11 | 5 | 211 | 12 | 273 | 1.04e-13 | 72.0 |
| Msa1201010 | MtrunA17_Chr3g0144751 | 33.779 | 299 | 182 | 7 | 223 | 516 | 10 | 297 | 3.57e-34 | 130 |
| Msa1201010 | MtrunA17_Chr3g0144751 | 24.812 | 266 | 139 | 7 | 5 | 211 | 12 | 275 | 5.05e-15 | 75.9 |
| Msa1201010 | MtrunA17_Chr1g0164671 | 32.068 | 237 | 128 | 5 | 283 | 516 | 19 | 225 | 4.49e-24 | 100 |
| Msa1201010 | MtrunA17_Chr3g0143741 | 28.296 | 311 | 196 | 9 | 218 | 516 | 20 | 315 | 3.93e-22 | 97.1 |
| Msa1201010 | MtrunA17_Chr5g0406441 | 50.485 | 103 | 49 | 1 | 222 | 324 | 2 | 102 | 8.40e-21 | 87.4 |
| Msa1201010 | MtrunA17_Chr5g0406441 | 43.137 | 102 | 27 | 1 | 1 | 71 | 1 | 102 | 3.98e-20 | 85.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1201010 | AT4G35690.1 | 37.624 | 303 | 153 | 9 | 224 | 516 | 7 | 283 | 5.49e-42 | 152 |
| Msa1201010 | AT4G35690.1 | 34.756 | 164 | 74 | 3 | 1 | 131 | 4 | 167 | 1.91e-22 | 97.8 |
| Msa1201010 | AT2G17080.1 | 35.473 | 296 | 147 | 9 | 225 | 515 | 5 | 261 | 1.45e-36 | 136 |
| Msa1201010 | AT2G17080.1 | 31.496 | 254 | 122 | 7 | 1 | 210 | 1 | 246 | 1.42e-26 | 108 |
| Msa1201010 | AT4G35710.1 | 36.545 | 301 | 152 | 11 | 227 | 516 | 10 | 282 | 2.79e-33 | 128 |
| Msa1201010 | AT4G35710.1 | 36.538 | 156 | 65 | 3 | 1 | 122 | 4 | 159 | 1.15e-20 | 92.8 |
| Msa1201010 | AT2G17070.1 | 32.990 | 291 | 157 | 7 | 225 | 513 | 5 | 259 | 1.34e-32 | 125 |
| Msa1201010 | AT2G17070.1 | 29.921 | 254 | 126 | 7 | 1 | 210 | 1 | 246 | 3.39e-23 | 99.4 |
| Msa1201010 | AT2G17680.1 | 36.482 | 307 | 161 | 10 | 224 | 517 | 7 | 292 | 4.48e-32 | 125 |
| Msa1201010 | AT2G17680.1 | 36.905 | 168 | 60 | 3 | 1 | 127 | 4 | 166 | 1.60e-20 | 92.4 |
| Msa1201010 | AT4G35720.1 | 32.278 | 316 | 185 | 11 | 225 | 516 | 14 | 324 | 2.01e-31 | 124 |
| Msa1201010 | AT4G35210.1 | 32.759 | 290 | 151 | 9 | 225 | 514 | 5 | 250 | 1.25e-29 | 117 |
| Msa1201010 | AT4G35210.1 | 30.738 | 244 | 127 | 7 | 1 | 210 | 1 | 236 | 1.03e-23 | 100 |
| Msa1201010 | AT4G35200.1 | 32.389 | 247 | 122 | 7 | 1 | 210 | 1 | 239 | 2.57e-27 | 110 |
| Msa1201010 | AT4G35200.1 | 32.192 | 292 | 153 | 9 | 225 | 514 | 5 | 253 | 2.72e-27 | 110 |
| Msa1201010 | AT4G35660.1 | 32.432 | 296 | 170 | 10 | 227 | 516 | 16 | 287 | 2.14e-24 | 103 |
| Msa1201010 | AT1G76210.1 | 29.675 | 246 | 144 | 4 | 272 | 516 | 8 | 225 | 1.57e-23 | 99.4 |
| Msa1201010 | AT4G35680.1 | 31.661 | 319 | 190 | 10 | 212 | 516 | 5 | 309 | 6.04e-23 | 99.8 |
| Msa1201010 | AT1G76240.1 | 25.697 | 323 | 183 | 10 | 216 | 516 | 20 | 307 | 4.00e-13 | 70.9 |
| Msa1201010 | AT3G51400.1 | 29.900 | 301 | 177 | 8 | 222 | 516 | 2 | 274 | 8.66e-13 | 69.3 |
| Msa1201010 | AT1G20520.1 | 28.400 | 250 | 146 | 4 | 270 | 516 | 6 | 225 | 8.96e-13 | 68.6 |
| Msa1201010 | AT3G51410.1 | 31.461 | 178 | 97 | 4 | 7 | 161 | 39 | 214 | 1.05e-11 | 66.2 |
Find 66 sgRNAs with CRISPR-Local
Find 590 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATTAGTACCTTCACTTAAA+AGG | 0.153684 | 8_1:+54173755 | None:intergenic |
| AGTAAGTAGTTTGATGATTA+TGG | 0.197984 | 8_1:-54164065 | Msa1201010:CDS |
| TTAACCTTTGATCTCAAAAT+TGG | 0.198720 | 8_1:+54164184 | None:intergenic |
| GCTATTGAAGGAATTGAAAA+TGG | 0.219192 | 8_1:-54163971 | Msa1201010:CDS |
| GGATAGTTCAATGAGAATTT+TGG | 0.221029 | 8_1:-54174217 | Msa1201010:CDS |
| TGAGATCAAAGGTTAATAAA+TGG | 0.320655 | 8_1:-54164177 | Msa1201010:CDS |
| AAACAAATTGATGGGTCAAT+TGG | 0.339076 | 8_1:-54164325 | Msa1201010:CDS |
| AAGGAGAAAAGTTGGTGATA+TGG | 0.364187 | 8_1:-54164422 | Msa1201010:CDS |
| AAGCCCTTCACTCTTGTCTA+AGG | 0.365459 | 8_1:-54174143 | Msa1201010:CDS |
| AAGGTTGAAACAATTTGTTT+TGG | 0.378647 | 8_1:-54164652 | Msa1201010:CDS |
| ACATGGAAGGTTAGAAGCTT+TGG | 0.383618 | 8_1:-54163999 | Msa1201010:CDS |
| TCTTCAATTTGAATTGTGCT+TGG | 0.385714 | 8_1:+54164724 | None:intergenic |
| AGCTTCAATCTGTTCTTAGA+AGG | 0.390838 | 8_1:-54164441 | Msa1201010:CDS |
| GATAATGCTTGTTGTGTTAG+TGG | 0.395453 | 8_1:+54164577 | None:intergenic |
| TGCATTTGTACAATTCTGTT+AGG | 0.403309 | 8_1:+54164620 | None:intergenic |
| CTATCCATTTGCTTCAAAGA+TGG | 0.408556 | 8_1:+54174030 | None:intergenic |
| ATAAATGGTCATTAGTTTCA+AGG | 0.411447 | 8_1:-54164162 | Msa1201010:CDS |
| AACTAATCAAACTCAAATCA+TGG | 0.412177 | 8_1:-54164699 | Msa1201010:CDS |
| ACATGAAAGATTGGAGGCTT+TGG | 0.416323 | 8_1:-54173713 | Msa1201010:CDS |
| ATTAGTACCTTCACTTAAAA+GGG | 0.427283 | 8_1:+54173756 | None:intergenic |
| AAAACCATGTTGCTGAATAT+TGG | 0.428191 | 8_1:-54164399 | Msa1201010:CDS |
| TTGATGCAGAAGGGTGTGTT+TGG | 0.432982 | 8_1:-54164139 | Msa1201010:CDS |
| TATCCATTTGCTTCAAAGAT+GGG | 0.447875 | 8_1:+54174031 | None:intergenic |
| TGGATATTTGTGGCATCACT+AGG | 0.456088 | 8_1:-54174197 | Msa1201010:CDS |
| GCAATTGAAAGTATTGAGAA+TGG | 0.456284 | 8_1:-54173685 | Msa1201010:intron |
| GATCCCATCTTTGAAGCAAA+TGG | 0.458716 | 8_1:-54174034 | Msa1201010:CDS |
| AAAAGGTCTAAGAATCTTAG+TGG | 0.463444 | 8_1:+54164511 | None:intergenic |
| TCTTCTACTCTAATTGTGCT+AGG | 0.472883 | 8_1:+54174411 | None:intergenic |
| GCTTTGGTGGTGGCTATTGA+AGG | 0.475197 | 8_1:-54163983 | Msa1201010:CDS |
| GTTCTTAGAAGGAGAAAAGT+TGG | 0.479402 | 8_1:-54164430 | Msa1201010:CDS |
| GCAGGCTGCACATGAAAGAT+TGG | 0.481060 | 8_1:-54173722 | Msa1201010:CDS |
| GTGCTTGGATGTGATCTTGT+TGG | 0.485813 | 8_1:+54164739 | None:intergenic |
| CTGAATATTGGTGTTTGAGA+AGG | 0.492295 | 8_1:-54164387 | Msa1201010:CDS |
| AAATGAGAATATTAATGAGT+TGG | 0.492996 | 8_1:-54164104 | Msa1201010:CDS |
| TAAGGAAAGACCACTATGAA+TGG | 0.495456 | 8_1:+54174341 | None:intergenic |
| GGATACAATTCTTCAAATCA+AGG | 0.500801 | 8_1:-54174175 | Msa1201010:CDS |
| TCTTGTCTAAGGAGAAGAAA+AGG | 0.505857 | 8_1:-54174132 | Msa1201010:CDS |
| AGTTTCAAGGTTGATGCAGA+AGG | 0.510581 | 8_1:-54164149 | Msa1201010:CDS |
| GTGCTAGGATGAGATCTAGA+AGG | 0.513144 | 8_1:+54174426 | None:intergenic |
| TAGCACAATTAGAGTAGAAG+AGG | 0.522386 | 8_1:-54174409 | Msa1201010:CDS |
| TGGAAGGTTAGAAGCTTTGG+TGG | 0.524132 | 8_1:-54163996 | Msa1201010:CDS |
| TTCTCCTTAGACAAGAGTGA+AGG | 0.531189 | 8_1:+54174139 | None:intergenic |
| TTTGAGAAGGAAAATGAGAA+AGG | 0.532765 | 8_1:-54164374 | Msa1201010:CDS |
| ATCATCATCATCAACATCAA+AGG | 0.556042 | 8_1:-54164671 | Msa1201010:CDS |
| ACTAATCAAACTCAAATCAT+GGG | 0.557427 | 8_1:-54164698 | Msa1201010:CDS |
| GAAATGCATTGAAGAGGTGT+TGG | 0.557821 | 8_1:-54174238 | Msa1201010:CDS |
| GGCTGCACATGAAAGATTGG+AGG | 0.562732 | 8_1:-54173719 | Msa1201010:CDS |
| TCTCCTTAGACAAGAGTGAA+GGG | 0.564139 | 8_1:+54174140 | None:intergenic |
| GGATATTTGTGGCATCACTA+GGG | 0.577026 | 8_1:-54174196 | Msa1201010:CDS |
| AACAAGCTCAAGACATGGGA+AGG | 0.580057 | 8_1:-54174381 | Msa1201010:CDS |
| GTTTCAAGGTTGATGCAGAA+GGG | 0.580414 | 8_1:-54164148 | Msa1201010:CDS |
| AGGTGAGAAATGCATTGAAG+AGG | 0.582191 | 8_1:-54174244 | Msa1201010:CDS |
| AGATTCAATCTGCACATGGA+AGG | 0.602686 | 8_1:-54164012 | Msa1201010:CDS |
| AAGGTTAGAAGCTTTGGTGG+TGG | 0.603606 | 8_1:-54163993 | Msa1201010:CDS |
| TTTAGCAACAAATTTCCACT+TGG | 0.605269 | 8_1:+54173861 | None:intergenic |
| TACTAATGGAGAAAACATGC+AGG | 0.606065 | 8_1:-54173740 | Msa1201010:CDS |
| AATTGAACAAGCTCAAGACA+TGG | 0.618716 | 8_1:-54174386 | Msa1201010:CDS |
| ACATCATGTTCCATTCATAG+TGG | 0.619690 | 8_1:-54174351 | Msa1201010:intron |
| AACACCAATATTCAGCAACA+TGG | 0.620970 | 8_1:+54164395 | None:intergenic |
| ATTGAACAAGCTCAAGACAT+GGG | 0.630590 | 8_1:-54174385 | Msa1201010:CDS |
| GTTGCTAAAATGATGCACAA+AGG | 0.639952 | 8_1:-54173847 | Msa1201010:CDS |
| GAGAAGATTCAATCTGCACA+TGG | 0.651774 | 8_1:-54164016 | Msa1201010:CDS |
| TTCAAGTGTTGAAAGAAGTG+TGG | 0.668403 | 8_1:-54174106 | Msa1201010:CDS |
| CAAAGTCAAAGACAACCAAG+TGG | 0.668953 | 8_1:-54173876 | Msa1201010:CDS |
| AACATGATATTTGATTGCCA+TGG | 0.672115 | 8_1:+54174464 | None:intergenic |
| GAATTTGAGTAAAGATGCTG+AGG | 0.685171 | 8_1:-54164041 | Msa1201010:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAATTTATATATTTAA+GGG | + | chr8_1:54173243-54173262 | None:intergenic | 0.0% |
| !! | AATATATAAATCATCTATTA+AGG | + | chr8_1:54164046-54164065 | None:intergenic | 10.0% |
| !! | AAAACAGAAATTATTAAATT+TGG | - | chr8_1:54166888-54166907 | Msa1201010:intron | 10.0% |
| !! | GCAAAAAATATATATTTATT+TGG | + | chr8_1:54168164-54168183 | None:intergenic | 10.0% |
| !!! | TTGTTTTTTTAATAAAAAAG+GGG | + | chr8_1:54168201-54168220 | None:intergenic | 10.0% |
| !!! | TACTTTTAAATACAATTAAA+AGG | + | chr8_1:54168449-54168468 | None:intergenic | 10.0% |
| !!! | TTATTTCAACTTATTTTAAA+TGG | - | chr8_1:54168492-54168511 | Msa1201010:intron | 10.0% |
| !!! | ATATATAATTTTGTTTACAA+TGG | + | chr8_1:54168650-54168669 | None:intergenic | 10.0% |
| !!! | GTTTTAAAAATCTATAATTA+AGG | + | chr8_1:54168754-54168773 | None:intergenic | 10.0% |
| !! | TCAAATATATATTATGTTAA+TGG | - | chr8_1:54168839-54168858 | Msa1201010:intron | 10.0% |
| !! | CAAATATATATTATGTTAAT+GGG | - | chr8_1:54168840-54168859 | Msa1201010:intron | 10.0% |
| !! | TAAATTATACAAAGAAATTT+AGG | - | chr8_1:54170762-54170781 | Msa1201010:intron | 10.0% |
| !!! | ATGTTAAAATACTTTTAATT+TGG | - | chr8_1:54171985-54172004 | Msa1201010:intron | 10.0% |
| !!! | TAAAATTAAATGATTTTCTA+TGG | + | chr8_1:54172054-54172073 | None:intergenic | 10.0% |
| !!! | TCTTTTTCATATTAAAAAAA+GGG | + | chr8_1:54172280-54172299 | None:intergenic | 10.0% |
| !!! | TATACAATTTTTTTCATTTT+TGG | + | chr8_1:54172607-54172626 | None:intergenic | 10.0% |
| !!! | TATAAAATATATAGCTTTAT+TGG | + | chr8_1:54173377-54173396 | None:intergenic | 10.0% |
| !! | AGATGATTTATATATTTCAT+TGG | - | chr8_1:54164050-54164069 | Msa1201010:CDS | 15.0% |
| !! | AAAATTGTATTCTCTTTATT+TGG | - | chr8_1:54164899-54164918 | Msa1201010:intron | 15.0% |
| !! | AAAACTGAAATTATTAAACT+TGG | - | chr8_1:54165198-54165217 | Msa1201010:intron | 15.0% |
| !! | AAACTGAAATTATTAAACTT+GGG | - | chr8_1:54165199-54165218 | Msa1201010:intron | 15.0% |
| !! | ATTAAATTTGATAAGAATGA+TGG | + | chr8_1:54165920-54165939 | None:intergenic | 15.0% |
| !! | AGTAAAATGTTTAAATACTA+AGG | - | chr8_1:54166830-54166849 | Msa1201010:intron | 15.0% |
| !!! | TTCTGTTTTATTTTTTGTTT+TGG | + | chr8_1:54166877-54166896 | None:intergenic | 15.0% |
| !! | TACACATAGTAATTTATATA+TGG | + | chr8_1:54167062-54167081 | None:intergenic | 15.0% |
| !! | CAAAATTAAAAGTAAATGAT+AGG | - | chr8_1:54167553-54167572 | Msa1201010:intron | 15.0% |
| !! | AATGTTAAAAGGTAATAAAA+AGG | - | chr8_1:54169068-54169087 | Msa1201010:intron | 15.0% |
| !! | ATGTTAAAAGGTAATAAAAA+GGG | - | chr8_1:54169069-54169088 | Msa1201010:intron | 15.0% |
| !! | TTAAATTGAGTCATTTAAAA+TGG | + | chr8_1:54169773-54169792 | None:intergenic | 15.0% |
| !!! | CTATACACTTTTTTTTTTTT+TGG | + | chr8_1:54169943-54169962 | None:intergenic | 15.0% |
| !!! | AAAAAAAAAAAAGTGTATAG+AGG | - | chr8_1:54169943-54169962 | Msa1201010:intron | 15.0% |
| !!! | AAAAAAAAAAAGTGTATAGA+GGG | - | chr8_1:54169944-54169963 | Msa1201010:intron | 15.0% |
| !!! | ACAAAATTCTTTTTTTATGT+TGG | - | chr8_1:54170969-54170988 | Msa1201010:intron | 15.0% |
| !!! | CAAAATTCTTTTTTTATGTT+GGG | - | chr8_1:54170970-54170989 | Msa1201010:intron | 15.0% |
| !!! | TAGTACATCATTTTTTTTAA+GGG | - | chr8_1:54172075-54172094 | Msa1201010:intron | 15.0% |
| !!! | CTCTTTTTCATATTAAAAAA+AGG | + | chr8_1:54172281-54172300 | None:intergenic | 15.0% |
| !! | AAATCAAATTTAATGCTTTA+TGG | - | chr8_1:54173114-54173133 | Msa1201010:intron | 15.0% |
| !!! | CTTTATTTTATTGAAATTTG+TGG | - | chr8_1:54173159-54173178 | Msa1201010:intron | 15.0% |
| !! | TATTAATTCAATATGTCAAA+GGG | + | chr8_1:54173332-54173351 | None:intergenic | 15.0% |
| !! | ATATTAATTCAATATGTCAA+AGG | + | chr8_1:54173333-54173352 | None:intergenic | 15.0% |
| !!! | GTTTCTTTTCTTTTCAATTT+AGG | + | chr8_1:54165013-54165032 | None:intergenic | 20.0% |
| !!! | TATTTTCTGTTTTAGGTTTT+CGG | + | chr8_1:54165179-54165198 | None:intergenic | 20.0% |
| !!! | TCAGTTTTATTTTCTGTTTT+AGG | + | chr8_1:54165186-54165205 | None:intergenic | 20.0% |
| !! | TATAAAGTAACATAATCAGA+TGG | - | chr8_1:54165523-54165542 | Msa1201010:intron | 20.0% |
| !! | TAGAAACAATCAAATTATTG+AGG | + | chr8_1:54166435-54166454 | None:intergenic | 20.0% |
| !! | AACAAAAACAATCAAAACAT+GGG | + | chr8_1:54166485-54166504 | None:intergenic | 20.0% |
| !!! | AACTTGTAAAAATAGGTTTT+CGG | - | chr8_1:54166738-54166757 | Msa1201010:intron | 20.0% |
| !! | TGGCTGAAATAATAATATTA+AGG | - | chr8_1:54166908-54166927 | Msa1201010:intron | 20.0% |
| !! | TCACACATATTAAAAAAAGT+TGG | + | chr8_1:54167183-54167202 | None:intergenic | 20.0% |
| !! | AGTCAAAAAGACTTATAATA+AGG | - | chr8_1:54167207-54167226 | Msa1201010:intron | 20.0% |
| !! | GTCAAAAAGACTTATAATAA+GGG | - | chr8_1:54167208-54167227 | Msa1201010:intron | 20.0% |
| !!! | ACACATTTTAAATTCGTAAA+AGG | - | chr8_1:54167302-54167321 | Msa1201010:intron | 20.0% |
| !!! | GTTTTTAATATCTTGTTCTT+AGG | + | chr8_1:54167628-54167647 | None:intergenic | 20.0% |
| !! | GAACAAGATATTAAAAACTA+TGG | - | chr8_1:54167630-54167649 | Msa1201010:intron | 20.0% |
| !! | ATACAATTAAAAGGATAGTT+TGG | + | chr8_1:54168440-54168459 | None:intergenic | 20.0% |
| !! | TGTTTGACATGTATATTTAA+AGG | + | chr8_1:54168776-54168795 | None:intergenic | 20.0% |
| !! | TGTTTAGAAAAGAAAGTAAA+TGG | - | chr8_1:54168865-54168884 | Msa1201010:intron | 20.0% |
| !! | GTTTAGAAAAGAAAGTAAAT+GGG | - | chr8_1:54168866-54168885 | Msa1201010:intron | 20.0% |
| !!! | TTTTTATTGGTCAAAAACAA+TGG | + | chr8_1:54169581-54169600 | None:intergenic | 20.0% |
| !! | CACATATATCAAAATATGTT+AGG | + | chr8_1:54169812-54169831 | None:intergenic | 20.0% |
| !! | CTAAATCATATAATATGAGA+CGG | - | chr8_1:54169842-54169861 | Msa1201010:intron | 20.0% |
| !! | AATGATTTAGGCTATATTAT+TGG | + | chr8_1:54169982-54170001 | None:intergenic | 20.0% |
| !! | TCTCATAAAGTGATAAAATA+TGG | + | chr8_1:54170069-54170088 | None:intergenic | 20.0% |
| !! | TAATAGAGAAAGAAAGTAAA+AGG | - | chr8_1:54170805-54170824 | Msa1201010:intron | 20.0% |
| !!! | ATAGGTCAATTATTTTAAGA+CGG | - | chr8_1:54171065-54171084 | Msa1201010:intron | 20.0% |
| !!! | TTACGAAAATTGATTTTGTT+TGG | + | chr8_1:54171152-54171171 | None:intergenic | 20.0% |
| !! | TCTCAAAACCAAAAAAAAAA+CGG | + | chr8_1:54171188-54171207 | None:intergenic | 20.0% |
| !!! | TAAAATACTTTTAATTTGGC+AGG | - | chr8_1:54171989-54172008 | Msa1201010:intron | 20.0% |
| !!! | GTAGTACATCATTTTTTTTA+AGG | - | chr8_1:54172074-54172093 | Msa1201010:intron | 20.0% |
| !! | TAAATGTAGAAACAATGTAT+TGG | + | chr8_1:54172218-54172237 | None:intergenic | 20.0% |
| !!! | AATGTTAACTTGTGATTTTA+AGG | + | chr8_1:54172256-54172275 | None:intergenic | 20.0% |
| !!! | AATGAGGTAAGATTTTTTTT+GGG | + | chr8_1:54172541-54172560 | None:intergenic | 20.0% |
| !!! | TAATGAGGTAAGATTTTTTT+TGG | + | chr8_1:54172542-54172561 | None:intergenic | 20.0% |
| !!! | AAACAAAAATTGACTTAATG+AGG | + | chr8_1:54172557-54172576 | None:intergenic | 20.0% |
| !! | CAAAAAATTGCATTATAACA+TGG | - | chr8_1:54172638-54172657 | Msa1201010:intron | 20.0% |
| !! | ATTTAAATCCATTAAGTCAA+TGG | - | chr8_1:54172722-54172741 | Msa1201010:intron | 20.0% |
| !! | TTATATATTTAAGGGAGATA+AGG | + | chr8_1:54173235-54173254 | None:intergenic | 20.0% |
| !! | ATTATTATAGAATGACATCA+AGG | - | chr8_1:54173351-54173370 | Msa1201010:intron | 20.0% |
| !! | TTATATATGTAGAGATTTAG+TGG | + | chr8_1:54173462-54173481 | None:intergenic | 20.0% |
| !! | TTCATCATTATTGAATTGAA+GGG | + | chr8_1:54173534-54173553 | None:intergenic | 20.0% |
| !! | TTTCATCATTATTGAATTGA+AGG | + | chr8_1:54173535-54173554 | None:intergenic | 20.0% |
| !! | CAATTCAATAATGATGAAAA+AGG | - | chr8_1:54173536-54173555 | Msa1201010:intron | 20.0% |
| !!! | TTTTGTTGAAACAAATTGAT+GGG | - | chr8_1:54174033-54174052 | Msa1201010:CDS | 20.0% |
| !! | AAATGAGAATATTAATGAGT+TGG | - | chr8_1:54174262-54174281 | Msa1201010:intron | 20.0% |
| !! | ATGAGAATTTTGGATATTTG+TGG | - | chr8_1:54164159-54164178 | Msa1201010:CDS | 25.0% |
| ! | ACACTCTAATCAAAGAATAA+AGG | + | chr8_1:54164401-54164420 | None:intergenic | 25.0% |
| ! | ATTAGTACCTTCACTTAAAA+GGG | + | chr8_1:54164613-54164632 | None:intergenic | 25.0% |
| !! | ATGAATAAAAATTGACTCTC+TGG | - | chr8_1:54165113-54165132 | Msa1201010:intron | 25.0% |
| ! | TATATCTAAAGAAACCCTAA+TGG | - | chr8_1:54165152-54165171 | Msa1201010:intron | 25.0% |
| ! | ATATCTAAAGAAACCCTAAT+GGG | - | chr8_1:54165153-54165172 | Msa1201010:intron | 25.0% |
| !! | CATTAATCTATGTTTTTCGT+TGG | + | chr8_1:54165644-54165663 | None:intergenic | 25.0% |
| ! | AAAAGTTCTTCTCTATTACT+AGG | - | chr8_1:54165887-54165906 | Msa1201010:intron | 25.0% |
| !!! | TAGAAGATTGTTCCATTTTT+TGG | - | chr8_1:54165980-54165999 | Msa1201010:intron | 25.0% |
| ! | TAAATACCTCAAAGTAACAT+TGG | + | chr8_1:54166196-54166215 | None:intergenic | 25.0% |
| ! | TATTTATGCACCTGATAAAT+GGG | - | chr8_1:54166210-54166229 | Msa1201010:intron | 25.0% |
| ! | CAACAAAAACAATCAAAACA+TGG | + | chr8_1:54166486-54166505 | None:intergenic | 25.0% |
| !!! | AACTTGTTTCTTTTCAATCT+AGG | + | chr8_1:54166707-54166726 | None:intergenic | 25.0% |
| !!! | TATTTTTTGTTTTGGATTCC+CGG | + | chr8_1:54166869-54166888 | None:intergenic | 25.0% |
| ! | TGTATGTATGTGTATAACTA+GGG | + | chr8_1:54167108-54167127 | None:intergenic | 25.0% |
| ! | AAAAGACTTATAATAAGGGA+TGG | - | chr8_1:54167212-54167231 | Msa1201010:intron | 25.0% |
| ! | ATAAATAGAGAAGAAAGAGT+GGG | + | chr8_1:54167906-54167925 | None:intergenic | 25.0% |
| ! | AATAAATAGAGAAGAAAGAG+TGG | + | chr8_1:54167907-54167926 | None:intergenic | 25.0% |
| ! | ATAAAAAAGGGGAAAATACT+TGG | + | chr8_1:54168190-54168209 | None:intergenic | 25.0% |
| !! | TTTGATTAAAAGTGAGTTGA+AGG | - | chr8_1:54168314-54168333 | Msa1201010:intron | 25.0% |
| !! | AAGGTGAATTGATTTATGTT+TGG | - | chr8_1:54168333-54168352 | Msa1201010:intron | 25.0% |
| !! | AGGTGAATTGATTTATGTTT+GGG | - | chr8_1:54168334-54168353 | Msa1201010:intron | 25.0% |
| ! | GGTAATAAAAAGGGTAATAA+AGG | - | chr8_1:54169078-54169097 | Msa1201010:intron | 25.0% |
| !!! | TTTCAATTTTCAAGTGTGTT+TGG | + | chr8_1:54169235-54169254 | None:intergenic | 25.0% |
| ! | ACTTGAAAATTGAAAAACCA+CGG | - | chr8_1:54169240-54169259 | Msa1201010:intron | 25.0% |
| ! | CACATTCTTTAATCAATTCA+TGG | + | chr8_1:54169389-54169408 | None:intergenic | 25.0% |
| ! | CATGAATTGATTAAAGAATG+TGG | - | chr8_1:54169387-54169406 | Msa1201010:intron | 25.0% |
| ! | GGCTACAAAAAACAAAAAAT+AGG | - | chr8_1:54169408-54169427 | Msa1201010:intron | 25.0% |
| ! | AAAAACAAAAAATAGGACCT+TGG | - | chr8_1:54169415-54169434 | Msa1201010:intron | 25.0% |
| !! | TCTTTTCTCTCTCTTTTTAT+TGG | + | chr8_1:54169594-54169613 | None:intergenic | 25.0% |
| !! | TTGAGTCATTTAAAATGGAA+CGG | + | chr8_1:54169768-54169787 | None:intergenic | 25.0% |
| !!! | GTTTTGGGTTATTAAAAAAG+AGG | + | chr8_1:54169904-54169923 | None:intergenic | 25.0% |
| !! | TACATGCTAATTAGTGTTTT+GGG | + | chr8_1:54169919-54169938 | None:intergenic | 25.0% |
| !! | ATACATGCTAATTAGTGTTT+TGG | + | chr8_1:54169920-54169939 | None:intergenic | 25.0% |
| !!! | ACTGTCTTTTTCAATGATTT+AGG | + | chr8_1:54169994-54170013 | None:intergenic | 25.0% |
| ! | TCATTGCTCCTAAATTATTA+TGG | + | chr8_1:54170241-54170260 | None:intergenic | 25.0% |
| !!! | TTGTTTTTCTCTCTTTTGAT+TGG | - | chr8_1:54170300-54170319 | Msa1201010:intron | 25.0% |
| !!! | TTTTGATTGGTCAAAAACAA+TGG | - | chr8_1:54170313-54170332 | Msa1201010:intron | 25.0% |
| ! | GTCAAAAAGTTGTAACAAAA+TGG | - | chr8_1:54170393-54170412 | Msa1201010:intron | 25.0% |
| ! | TTGTTACACATAATCTGATT+TGG | - | chr8_1:54170511-54170530 | Msa1201010:intron | 25.0% |
| ! | TGTTACACATAATCTGATTT+GGG | - | chr8_1:54170512-54170531 | Msa1201010:intron | 25.0% |
| !!! | ACTTGTAACCGTTTTTTTTT+TGG | - | chr8_1:54171177-54171196 | Msa1201010:intron | 25.0% |
| !!! | TATTTTGATTCCCATTGAAT+TGG | + | chr8_1:54171285-54171304 | None:intergenic | 25.0% |
| ! | CAATGGGAATCAAAATATAA+AGG | - | chr8_1:54171288-54171307 | Msa1201010:intron | 25.0% |
| !!! | TTGTTTTTCTCACTTCTTAT+TGG | - | chr8_1:54171420-54171439 | Msa1201010:intron | 25.0% |
| ! | TTCTTATTGGTCAAAAACAA+TGG | - | chr8_1:54171433-54171452 | Msa1201010:intron | 25.0% |
| !!! | AACCACTTTTTGACAATTTT+TGG | + | chr8_1:54171518-54171537 | None:intergenic | 25.0% |
| ! | AATGTGTACTATTAAGTCTT+TGG | - | chr8_1:54171639-54171658 | Msa1201010:intron | 25.0% |
| !! | TTTGGTTAGGAATTGATTTA+AGG | - | chr8_1:54171657-54171676 | Msa1201010:intron | 25.0% |
| ! | TTGTTCTTATTACAAGACAA+GGG | + | chr8_1:54171941-54171960 | None:intergenic | 25.0% |
| !! | ACAATGTTATGTTCCTTTTA+AGG | + | chr8_1:54172022-54172041 | None:intergenic | 25.0% |
| ! | ATTGAATGCACAAAGTTTAA+GGG | + | chr8_1:54172157-54172176 | None:intergenic | 25.0% |
| ! | AATTGAATGCACAAAGTTTA+AGG | + | chr8_1:54172158-54172177 | None:intergenic | 25.0% |
| ! | AATTCCATATAATTCATCCA+AGG | - | chr8_1:54172352-54172371 | Msa1201010:intron | 25.0% |
| ! | AATGTTACATAAATGTACCT+TGG | + | chr8_1:54172372-54172391 | None:intergenic | 25.0% |
| ! | TCATTAGATGAAATCAATGT+GGG | + | chr8_1:54172923-54172942 | None:intergenic | 25.0% |
| ! | TTCATTAGATGAAATCAATG+TGG | + | chr8_1:54172924-54172943 | None:intergenic | 25.0% |
| ! | TTTAACTGTGATTAATCTTG+TGG | + | chr8_1:54173026-54173045 | None:intergenic | 25.0% |
| ! | ACAAACTTCTCTTTAACATT+TGG | - | chr8_1:54173185-54173204 | Msa1201010:intron | 25.0% |
| ! | GAGAGAGAACTAAATTAAAA+TGG | + | chr8_1:54173502-54173521 | None:intergenic | 25.0% |
| !! | CATATTTGCTTGAATGTTTT+TGG | + | chr8_1:54173587-54173606 | None:intergenic | 25.0% |
| ! | CAAAAACATTCAAGCAAATA+TGG | - | chr8_1:54173585-54173604 | Msa1201010:intron | 25.0% |
| ! | AACTAATCAAACTCAAATCA+TGG | - | chr8_1:54173667-54173686 | Msa1201010:intron | 25.0% |
| ! | ACTAATCAAACTCAAATCAT+GGG | - | chr8_1:54173668-54173687 | Msa1201010:intron | 25.0% |
| !!! | AAGGTTGAAACAATTTGTTT+TGG | - | chr8_1:54173714-54173733 | Msa1201010:CDS | 25.0% |
| ! | TCAACACAAAAATGAGAAAT+GGG | - | chr8_1:54173812-54173831 | Msa1201010:CDS | 25.0% |
| !!! | GATGATGTTTTGTTAATGAA+AGG | - | chr8_1:54173891-54173910 | Msa1201010:CDS | 25.0% |
| !! | CTTTTGTTGAAACAAATTGA+TGG | - | chr8_1:54174032-54174051 | Msa1201010:CDS | 25.0% |
| !!! | TGGATCATCATTTTTTTCAT+TGG | - | chr8_1:54174061-54174080 | Msa1201010:CDS | 25.0% |
| ! | TTAACCTTTGATCTCAAAAT+TGG | + | chr8_1:54174185-54174204 | None:intergenic | 25.0% |
| ! | TGAGATCAAAGGTTAATAAA+TGG | - | chr8_1:54174189-54174208 | Msa1201010:CDS | 25.0% |
| !! | ATAAATGGTCATTAGTTTCA+AGG | - | chr8_1:54174204-54174223 | Msa1201010:CDS | 25.0% |
| !! | AGTAAGTAGTTTGATGATTA+TGG | - | chr8_1:54174301-54174320 | Msa1201010:intron | 25.0% |
| ! | GGATAGTTCAATGAGAATTT+TGG | - | chr8_1:54164149-54164168 | Msa1201010:CDS | 30.0% |
| GGATACAATTCTTCAAATCA+AGG | - | chr8_1:54164191-54164210 | Msa1201010:CDS | 30.0% | |
| TATCCATTTGCTTCAAAGAT+GGG | + | chr8_1:54164338-54164357 | None:intergenic | 30.0% | |
| AATTTGCATGTCTTCAACTT+TGG | - | chr8_1:54164362-54164381 | Msa1201010:CDS | 30.0% | |
| TTTAGCAACAAATTTCCACT+TGG | + | chr8_1:54164508-54164527 | None:intergenic | 30.0% | |
| !! | TTAAACACCCTTTTAAGTGA+AGG | - | chr8_1:54164603-54164622 | Msa1201010:CDS | 30.0% |
| CATTAGTACCTTCACTTAAA+AGG | + | chr8_1:54164614-54164633 | None:intergenic | 30.0% | |
| !!! | CTTTTAAGTGAAGGTACTAA+TGG | - | chr8_1:54164612-54164631 | Msa1201010:CDS | 30.0% |
| !! | GCAATTGAAAGTATTGAGAA+TGG | - | chr8_1:54164681-54164700 | Msa1201010:CDS | 30.0% |
| !! | TGAAAGTATTGAGAATGGTT+TGG | - | chr8_1:54164686-54164705 | Msa1201010:CDS | 30.0% |
| ! | ATGGTTTGGAGAACTTATTT+AGG | - | chr8_1:54164700-54164719 | Msa1201010:CDS | 30.0% |
| !!! | AAGTCATCCATGTTTTAGTA+GGG | - | chr8_1:54164808-54164827 | Msa1201010:intron | 30.0% |
| ACTTGATTGAGAAACAACAA+TGG | + | chr8_1:54164938-54164957 | None:intergenic | 30.0% | |
| TTTATATGAATGAGAACTCG+AGG | + | chr8_1:54165287-54165306 | None:intergenic | 30.0% | |
| AAGTAACATAATCAGATGGT+TGG | - | chr8_1:54165527-54165546 | Msa1201010:intron | 30.0% | |
| TGATTGTATTCTCTATAACC+TGG | - | chr8_1:54165676-54165695 | Msa1201010:intron | 30.0% | |
| ! | GGATAAAAATGGTGTTGAAT+TGG | + | chr8_1:54165847-54165866 | None:intergenic | 30.0% |
| ACAATGGAAGAGGATAAAAA+TGG | + | chr8_1:54165858-54165877 | None:intergenic | 30.0% | |
| GTATCAAGTCAACCAAAAAA+TGG | + | chr8_1:54165995-54166014 | None:intergenic | 30.0% | |
| GTTTATAACAGTTGCTCATA+AGG | + | chr8_1:54166109-54166128 | None:intergenic | 30.0% | |
| GTATTTATGCACCTGATAAA+TGG | - | chr8_1:54166209-54166228 | Msa1201010:intron | 30.0% | |
| ! | TTTCTGAGTATTGTGTTTCA+CGG | - | chr8_1:54166245-54166264 | Msa1201010:intron | 30.0% |
| TATCTCAATAAAGCTTGTCA+TGG | + | chr8_1:54166350-54166369 | None:intergenic | 30.0% | |
| ! | GTGTTGACAAATCTCAAAAA+AGG | - | chr8_1:54166372-54166391 | Msa1201010:intron | 30.0% |
| !! | TTGAGGATTAAGTTTTTCAG+AGG | + | chr8_1:54166418-54166437 | None:intergenic | 30.0% |
| AAAAACAATCAAAACATGGG+AGG | + | chr8_1:54166482-54166501 | None:intergenic | 30.0% | |
| AGCGACAAACTTGTAAAAAT+AGG | - | chr8_1:54166731-54166750 | Msa1201010:intron | 30.0% | |
| ! | AGAGTTTTCTCAATTTCTTG+TGG | + | chr8_1:54166767-54166786 | None:intergenic | 30.0% |
| AAATACTAAGGAAACCCTAA+TGG | - | chr8_1:54166842-54166861 | Msa1201010:intron | 30.0% | |
| GTATGTATGTGTATAACTAG+GGG | + | chr8_1:54167107-54167126 | None:intergenic | 30.0% | |
| CTGTATGTATGTGTATAACT+AGG | + | chr8_1:54167109-54167128 | None:intergenic | 30.0% | |
| TTGATATGGAGACAATATTC+AGG | + | chr8_1:54167269-54167288 | None:intergenic | 30.0% | |
| TGTACACAATTAAAGACTGA+GGG | - | chr8_1:54167344-54167363 | Msa1201010:intron | 30.0% | |
| ! | AGTGCAAAATTGCTCATTTT+AGG | + | chr8_1:54167694-54167713 | None:intergenic | 30.0% |
| ! | TAAAATGAGCAATTTTGCAC+TGG | - | chr8_1:54167693-54167712 | Msa1201010:intron | 30.0% |
| TCTATCCAAACAATAGAGAA+AGG | - | chr8_1:54168021-54168040 | Msa1201010:intron | 30.0% | |
| AAACATACACTTACATGTGT+AGG | + | chr8_1:54168240-54168259 | None:intergenic | 30.0% | |
| TACACATGTAAGTGTATGTT+TGG | - | chr8_1:54168239-54168258 | Msa1201010:intron | 30.0% | |
| ATGTAAGTGTATGTTTGGTA+CGG | - | chr8_1:54168244-54168263 | Msa1201010:intron | 30.0% | |
| AAGTGATTCTTATGACTTGA+TGG | - | chr8_1:54168370-54168389 | Msa1201010:intron | 30.0% | |
| ! | AAAAGAAAGTAAATGGGCTT+TGG | - | chr8_1:54168872-54168891 | Msa1201010:intron | 30.0% |
| AACCAGGAAAATTAAAAACC+AGG | - | chr8_1:54168968-54168987 | Msa1201010:intron | 30.0% | |
| ACCAGGAAAATTAAAAACCA+GGG | - | chr8_1:54168969-54168988 | Msa1201010:intron | 30.0% | |
| ! | GACGCAAATATATGGATTTT+AGG | + | chr8_1:54169017-54169036 | None:intergenic | 30.0% |
| ACAAGATCGTGAATGTTAAA+AGG | - | chr8_1:54169057-54169076 | Msa1201010:intron | 30.0% | |
| AAAGGGTAATAAAGGAAGAA+AGG | - | chr8_1:54169086-54169105 | Msa1201010:intron | 30.0% | |
| AAGGGTAATAAAGGAAGAAA+GGG | - | chr8_1:54169087-54169106 | Msa1201010:intron | 30.0% | |
| !! | GTAAACGAGAATTGATTTTG+CGG | - | chr8_1:54169133-54169152 | Msa1201010:intron | 30.0% |
| ! | ATTGACCTTTTAAGCTTACT+TGG | + | chr8_1:54169444-54169463 | None:intergenic | 30.0% |
| AAAACAATGGAGAGAGAAAA+AGG | + | chr8_1:54170326-54170345 | None:intergenic | 30.0% | |
| ! | TGACTGAAAAGAAAAGCATA+TGG | + | chr8_1:54169720-54169739 | None:intergenic | 30.0% |
| AATCATATAATATGAGACGG+AGG | - | chr8_1:54169845-54169864 | Msa1201010:intron | 30.0% | |
| ATCATATAATATGAGACGGA+GGG | - | chr8_1:54169846-54169865 | Msa1201010:intron | 30.0% | |
| TGGGTTATTAAAAAAGAGGA+GGG | + | chr8_1:54169900-54169919 | None:intergenic | 30.0% | |
| TTGGGTTATTAAAAAAGAGG+AGG | + | chr8_1:54169901-54169920 | None:intergenic | 30.0% | |
| CTCATTACACTATTGTTTAC+GGG | + | chr8_1:54170179-54170198 | None:intergenic | 30.0% | |
| GCTCATTACACTATTGTTTA+CGG | + | chr8_1:54170180-54170199 | None:intergenic | 30.0% | |
| AAAACAATGGAGAGAGAAAA+AGG | - | chr8_1:54170326-54170345 | Msa1201010:intron | 30.0% | |
| ATCATGTGCATTATTCAGTT+TGG | - | chr8_1:54170455-54170474 | Msa1201010:intron | 30.0% | |
| TCATGTGCATTATTCAGTTT+GGG | - | chr8_1:54170456-54170475 | Msa1201010:intron | 30.0% | |
| ATGTGTAACAAAGACTGAAT+CGG | + | chr8_1:54170502-54170521 | None:intergenic | 30.0% | |
| !! | TAATCTGATTTGGGATGATT+TGG | - | chr8_1:54170521-54170540 | Msa1201010:intron | 30.0% |
| ! | CTTTTGTGTATCATTATCGA+TGG | - | chr8_1:54170656-54170675 | Msa1201010:intron | 30.0% |
| CTAATGTCTAAACAACCTAA+AGG | + | chr8_1:54170688-54170707 | None:intergenic | 30.0% | |
| CAAAAGATTGTCACAAGAAA+TGG | + | chr8_1:54170737-54170756 | None:intergenic | 30.0% | |
| TCACAAAAGTTGTCAAAAAG+TGG | - | chr8_1:54170855-54170874 | Msa1201010:intron | 30.0% | |
| ! | CATCTATTTGATGACATAAC+AGG | + | chr8_1:54171228-54171247 | None:intergenic | 30.0% |
| GTCCAAAAATTGTCAAAAAG+TGG | - | chr8_1:54171513-54171532 | Msa1201010:intron | 30.0% | |
| TGCTTTCAAAATACTCTTAG+TGG | - | chr8_1:54171611-54171630 | Msa1201010:intron | 30.0% | |
| GTACTATTAAGTCTTTGGTT+AGG | - | chr8_1:54171644-54171663 | Msa1201010:intron | 30.0% | |
| TGGGTGTGTGAATAATAATT+TGG | + | chr8_1:54171745-54171764 | None:intergenic | 30.0% | |
| GTTGTTCTTATTACAAGACA+AGG | + | chr8_1:54171942-54171961 | None:intergenic | 30.0% | |
| AACCATACAATAGAATATCG+TGG | - | chr8_1:54171959-54171978 | Msa1201010:intron | 30.0% | |
| TTCCACGATATTCTATTGTA+TGG | + | chr8_1:54171964-54171983 | None:intergenic | 30.0% | |
| GGAATTGAATGTTACGATTA+TGG | + | chr8_1:54172338-54172357 | None:intergenic | 30.0% | |
| TGTACCTTGGATGAATTATA+TGG | + | chr8_1:54172359-54172378 | None:intergenic | 30.0% | |
| TCTATCGTGATATTTCATCA+AGG | + | chr8_1:54172421-54172440 | None:intergenic | 30.0% | |
| TCTAACATTCACTCTTCTAT+TGG | - | chr8_1:54172841-54172860 | Msa1201010:intron | 30.0% | |
| CTAACATTCACTCTTCTATT+GGG | - | chr8_1:54172842-54172861 | Msa1201010:intron | 30.0% | |
| TAATTCAATATGTCAAAGGG+TGG | + | chr8_1:54173329-54173348 | None:intergenic | 30.0% | |
| !!! | ATGTTTTTGGTTTGTGGAAA+AGG | + | chr8_1:54173574-54173593 | None:intergenic | 30.0% |
| TCTTCAATTTGAATTGTGCT+TGG | + | chr8_1:54173645-54173664 | None:intergenic | 30.0% | |
| ATCATCATCATCAACATCAA+AGG | - | chr8_1:54173695-54173714 | Msa1201010:CDS | 30.0% | |
| TGCATTTGTACAATTCTGTT+AGG | + | chr8_1:54173749-54173768 | None:intergenic | 30.0% | |
| CTCAACACAAAAATGAGAAA+TGG | - | chr8_1:54173811-54173830 | Msa1201010:CDS | 30.0% | |
| AAAAGGTCTAAGAATCTTAG+TGG | + | chr8_1:54173858-54173877 | None:intergenic | 30.0% | |
| AAAACCATGTTGCTGAATAT+TGG | - | chr8_1:54173967-54173986 | Msa1201010:intron | 30.0% | |
| TTTGAGAAGGAAAATGAGAA+AGG | - | chr8_1:54173992-54174011 | Msa1201010:intron | 30.0% | |
| ! | AAACAAATTGATGGGTCAAT+TGG | - | chr8_1:54174041-54174060 | Msa1201010:CDS | 30.0% |
| ! | GCACTTTTACAATTGAACAA+AGG | + | chr8_1:54174100-54174119 | None:intergenic | 30.0% |
| !!! | TTCACCAATTTTGAGATCAA+AGG | - | chr8_1:54174178-54174197 | Msa1201010:CDS | 30.0% |
| !! | GAGTTGGAAAAAGTTGATTT+TGG | - | chr8_1:54174278-54174297 | Msa1201010:intron | 30.0% |
| GCTATTGAAGGAATTGAAAA+TGG | - | chr8_1:54174395-54174414 | Msa1201010:CDS | 30.0% | |
| TCTTCTACTCTAATTGTGCT+AGG | + | chr8_1:54163958-54163977 | None:intergenic | 35.0% | |
| TAGCACAATTAGAGTAGAAG+AGG | - | chr8_1:54163957-54163976 | Msa1201010:CDS | 35.0% | |
| AATTGAACAAGCTCAAGACA+TGG | - | chr8_1:54163980-54163999 | Msa1201010:CDS | 35.0% | |
| ATTGAACAAGCTCAAGACAT+GGG | - | chr8_1:54163981-54164000 | Msa1201010:CDS | 35.0% | |
| ACATCATGTTCCATTCATAG+TGG | - | chr8_1:54164015-54164034 | Msa1201010:CDS | 35.0% | |
| TAAGGAAAGACCACTATGAA+TGG | + | chr8_1:54164028-54164047 | None:intergenic | 35.0% | |
| ATTGGATGATCTTCTCAACA+TGG | - | chr8_1:54164068-54164087 | Msa1201010:CDS | 35.0% | |
| ATGGTGAGAAATCACTTGTT+GGG | + | chr8_1:54164100-54164119 | None:intergenic | 35.0% | |
| TATGGTGAGAAATCACTTGT+TGG | + | chr8_1:54164101-54164120 | None:intergenic | 35.0% | |
| TCTTGTCTAAGGAGAAGAAA+AGG | - | chr8_1:54164234-54164253 | Msa1201010:CDS | 35.0% | |
| !! | TTCAAGTGTTGAAAGAAGTG+TGG | - | chr8_1:54164260-54164279 | Msa1201010:CDS | 35.0% |
| CTATCCATTTGCTTCAAAGA+TGG | + | chr8_1:54164339-54164358 | None:intergenic | 35.0% | |
| GTTGCTAAAATGATGCACAA+AGG | - | chr8_1:54164519-54164538 | Msa1201010:CDS | 35.0% | |
| TACTAATGGAGAAAACATGC+AGG | - | chr8_1:54164626-54164645 | Msa1201010:CDS | 35.0% | |
| ! | CTAAAACATGGATGACTTGT+AGG | + | chr8_1:54164806-54164825 | None:intergenic | 35.0% |
| !!! | CAAGTCATCCATGTTTTAGT+AGG | - | chr8_1:54164807-54164826 | Msa1201010:intron | 35.0% |
| AGTAGATCCCTACTAAAACA+TGG | + | chr8_1:54164818-54164837 | None:intergenic | 35.0% | |
| ! | TTTTAGTAGGGATCTACTTG+AGG | - | chr8_1:54164820-54164839 | Msa1201010:intron | 35.0% |
| GAGCTCAGTGAAAAATTCAA+TGG | - | chr8_1:54164855-54164874 | Msa1201010:intron | 35.0% | |
| AACCTGTGAAAATAGAGTTC+CGG | - | chr8_1:54165049-54165068 | Msa1201010:intron | 35.0% | |
| TCTCAATTTCTCGTGAATTC+CGG | + | chr8_1:54165071-54165090 | None:intergenic | 35.0% | |
| CTCTTTGCATTTCACTGAAT+AGG | + | chr8_1:54165363-54165382 | None:intergenic | 35.0% | |
| CTATTCAGTGAAATGCAAAG+AGG | - | chr8_1:54165361-54165380 | Msa1201010:intron | 35.0% | |
| ACATTTCTTCGATGGGATAA+AGG | + | chr8_1:54165412-54165431 | None:intergenic | 35.0% | |
| TGCTACTACATTTCTTCGAT+GGG | + | chr8_1:54165419-54165438 | None:intergenic | 35.0% | |
| ATGCTACTACATTTCTTCGA+TGG | + | chr8_1:54165420-54165439 | None:intergenic | 35.0% | |
| TAAAGTCGAGGCTAAAATGA+TGG | + | chr8_1:54165461-54165480 | None:intergenic | 35.0% | |
| ATAAAAATTCCAACCACTCG+CGG | + | chr8_1:54165506-54165525 | None:intergenic | 35.0% | |
| GTATTCTCTATAACCTGGAT+AGG | - | chr8_1:54165681-54165700 | Msa1201010:intron | 35.0% | |
| TTGATCATTTCCTTCACACT+AGG | - | chr8_1:54165743-54165762 | Msa1201010:intron | 35.0% | |
| TGATCATTTCCTTCACACTA+GGG | - | chr8_1:54165744-54165763 | Msa1201010:intron | 35.0% | |
| GAACAATCTTCTAATGCAGT+TGG | + | chr8_1:54165973-54165992 | None:intergenic | 35.0% | |
| GCAACTGTTATAAACACCTT+TGG | - | chr8_1:54166114-54166133 | Msa1201010:intron | 35.0% | |
| GTTATAAACACCTTTGGTAG+TGG | - | chr8_1:54166120-54166139 | Msa1201010:intron | 35.0% | |
| ! | TTTTCAACAACCACTACCAA+AGG | + | chr8_1:54166133-54166152 | None:intergenic | 35.0% |
| !! | TTGTCTCCAATGTTACTTTG+AGG | - | chr8_1:54166187-54166206 | Msa1201010:intron | 35.0% |
| GTGAAACACAATACTCAGAA+AGG | + | chr8_1:54166246-54166265 | None:intergenic | 35.0% | |
| ! | CATACGAAAAATGGGTTTCT+TGG | + | chr8_1:54166322-54166341 | None:intergenic | 35.0% |
| TGGCTTCTCATACGAAAAAT+GGG | + | chr8_1:54166330-54166349 | None:intergenic | 35.0% | |
| ATGGCTTCTCATACGAAAAA+TGG | + | chr8_1:54166331-54166350 | None:intergenic | 35.0% | |
| !! | AGGATTAAGTTTTTCAGAGG+TGG | + | chr8_1:54166415-54166434 | None:intergenic | 35.0% |
| !! | ATTTGATTGTTTCTAGCACG+TGG | - | chr8_1:54166440-54166459 | Msa1201010:intron | 35.0% |
| !!! | CAATGTTTTGACAACACAAG+TGG | + | chr8_1:54166546-54166565 | None:intergenic | 35.0% |
| ! | TGTCAAAACATTGATAGTCG+TGG | - | chr8_1:54166553-54166572 | Msa1201010:intron | 35.0% |
| TATGTGACTCACTTGGATAT+AGG | + | chr8_1:54166941-54166960 | None:intergenic | 35.0% | |
| ! | TTTGAGATATGTGACTCACT+TGG | + | chr8_1:54166948-54166967 | None:intergenic | 35.0% |
| !!! | CTATACTTTTTTCCCAAGGA+CGG | + | chr8_1:54167024-54167043 | None:intergenic | 35.0% |
| !!! | GAGACTATACTTTTTTCCCA+AGG | + | chr8_1:54167028-54167047 | None:intergenic | 35.0% |
| TACACATACATACAGAGAAC+AGG | - | chr8_1:54167114-54167133 | Msa1201010:intron | 35.0% | |
| TATGCTCTGCTCATTTGATA+TGG | + | chr8_1:54167283-54167302 | None:intergenic | 35.0% | |
| GTGTACACAATTAAAGACTG+AGG | - | chr8_1:54167343-54167362 | Msa1201010:intron | 35.0% | |
| ! | TGTCCTAAGAGTACATGTTA+AGG | - | chr8_1:54167666-54167685 | Msa1201010:intron | 35.0% |
| GTTCCTTAACATGTACTCTT+AGG | + | chr8_1:54167672-54167691 | None:intergenic | 35.0% | |
| TCGTACAGTCAACTTCTTAA+AGG | + | chr8_1:54167736-54167755 | None:intergenic | 35.0% | |
| TGAGAGTCAAAGATAAGGAT+GGG | + | chr8_1:54167988-54168007 | None:intergenic | 35.0% | |
| ATGAGAGTCAAAGATAAGGA+TGG | + | chr8_1:54167989-54168008 | None:intergenic | 35.0% | |
| AGAGATGAGAGTCAAAGATA+AGG | + | chr8_1:54167993-54168012 | None:intergenic | 35.0% | |
| TGACTCCTTTCTCTATTGTT+TGG | + | chr8_1:54168029-54168048 | None:intergenic | 35.0% | |
| CACTTACATGTGTAGGAAAA+GGG | + | chr8_1:54168233-54168252 | None:intergenic | 35.0% | |
| ACACTTACATGTGTAGGAAA+AGG | + | chr8_1:54168234-54168253 | None:intergenic | 35.0% | |
| !! | TCTTATGACTTGATGGTGTT+TGG | - | chr8_1:54168377-54168396 | Msa1201010:intron | 35.0% |
| AGGTTGAGGAAGGAATTATT+GGG | + | chr8_1:54168900-54168919 | None:intergenic | 35.0% | |
| !!! | TCCCTGGTTTTTAATTTTCC+TGG | + | chr8_1:54168973-54168992 | None:intergenic | 35.0% |
| AAATTAAAAACCAGGGATGC+TGG | - | chr8_1:54168976-54168995 | Msa1201010:intron | 35.0% | |
| AATTAAAAACCAGGGATGCT+GGG | - | chr8_1:54168977-54168996 | Msa1201010:intron | 35.0% | |
| AAGAACACGACGCAAATATA+TGG | + | chr8_1:54169025-54169044 | None:intergenic | 35.0% | |
| AGGGTAATAAAGGAAGAAAG+GGG | - | chr8_1:54169088-54169107 | Msa1201010:intron | 35.0% | |
| GATTTCCAAATCAATTCTGC+CGG | + | chr8_1:54169329-54169348 | None:intergenic | 35.0% | |
| GTCAAAAAGTTGTCAGAAAG+TGG | + | chr8_1:54169501-54169520 | None:intergenic | 35.0% | |
| GTCACATAAGTTGTCTCATT+TGG | - | chr8_1:54169618-54169637 | Msa1201010:intron | 35.0% | |
| ! | GATCAAGGAAATCCTTTTCT+TGG | + | chr8_1:54169685-54169704 | None:intergenic | 35.0% |
| ! | AGTCATTTAAAATGGAACGG+TGG | + | chr8_1:54169765-54169784 | None:intergenic | 35.0% |
| TATTGTTTACGGGCTTGATT+TGG | + | chr8_1:54170169-54170188 | None:intergenic | 35.0% | |
| CCTAAATTATTATGGCTAGG+AGG | + | chr8_1:54170233-54170252 | None:intergenic | 35.0% | |
| CCTCCTAGCCATAATAATTT+AGG | - | chr8_1:54170230-54170249 | Msa1201010:intron | 35.0% | |
| GCTCCTAAATTATTATGGCT+AGG | + | chr8_1:54170236-54170255 | None:intergenic | 35.0% | |
| CATCCATTTAATGACAACCT+TGG | - | chr8_1:54170269-54170288 | Msa1201010:intron | 35.0% | |
| TCACCAAGGTTGTCATTAAA+TGG | + | chr8_1:54170275-54170294 | None:intergenic | 35.0% | |
| GAAAAACAAAGTTGTCACCA+AGG | + | chr8_1:54170289-54170308 | None:intergenic | 35.0% | |
| CATTATTCAGTTTGGGCATA+TGG | - | chr8_1:54170463-54170482 | Msa1201010:intron | 35.0% | |
| ! | TCAAGATCATCTCGTTTTAG+TGG | - | chr8_1:54170607-54170626 | Msa1201010:intron | 35.0% |
| TATCGATGGCTAAATCCTTT+AGG | - | chr8_1:54170670-54170689 | Msa1201010:intron | 35.0% | |
| !!! | GGTCAATTATTTTAAGACGG+TGG | - | chr8_1:54171068-54171087 | Msa1201010:intron | 35.0% |
| TTTGAGCGTCAAAATAGTGT+CGG | + | chr8_1:54171103-54171122 | None:intergenic | 35.0% | |
| GGGAATCAAAATATAAAGGC+CGG | - | chr8_1:54171292-54171311 | Msa1201010:intron | 35.0% | |
| AGAGAGAAAAAAGAAGAGAG+AGG | - | chr8_1:54171456-54171475 | Msa1201010:intron | 35.0% | |
| !! | TGCATTTTGGCACAATTCAT+GGG | + | chr8_1:54171784-54171803 | None:intergenic | 35.0% |
| TTACACACATATCCAATCTC+GGG | + | chr8_1:54171898-54171917 | None:intergenic | 35.0% | |
| CTTACACACATATCCAATCT+CGG | + | chr8_1:54171899-54171918 | None:intergenic | 35.0% | |
| TCTTATTACAAGACAAGGGT+TGG | + | chr8_1:54171937-54171956 | None:intergenic | 35.0% | |
| TAGTGTTAAATTGTGCCCTT+AGG | - | chr8_1:54172098-54172117 | Msa1201010:intron | 35.0% | |
| AGTGTTAAATTGTGCCCTTA+GGG | - | chr8_1:54172099-54172118 | Msa1201010:intron | 35.0% | |
| TTTCTTAACATGTGCCCTAA+GGG | + | chr8_1:54172116-54172135 | None:intergenic | 35.0% | |
| ATTTCTTAACATGTGCCCTA+AGG | + | chr8_1:54172117-54172136 | None:intergenic | 35.0% | |
| TTCATCAAGGTCGGTTATAA+TGG | + | chr8_1:54172408-54172427 | None:intergenic | 35.0% | |
| TCGTGATATTTCATCAAGGT+CGG | + | chr8_1:54172417-54172436 | None:intergenic | 35.0% | |
| ATGTACGTGGCTAAAATCAT+GGG | - | chr8_1:54172455-54172474 | Msa1201010:intron | 35.0% | |
| CTAAAATCATGGGAAGATAG+AGG | - | chr8_1:54172465-54172484 | Msa1201010:intron | 35.0% | |
| TATAACATGGCATCCATCTT+TGG | - | chr8_1:54172651-54172670 | Msa1201010:intron | 35.0% | |
| !! | TTATGCGACCATTGACTTAA+TGG | + | chr8_1:54172733-54172752 | None:intergenic | 35.0% |
| ! | AATCTTGTGGAAGTATGTGT+AGG | + | chr8_1:54173013-54173032 | None:intergenic | 35.0% |
| !!! | GCTTGAATGTTTTTGGTTTG+TGG | + | chr8_1:54173580-54173599 | None:intergenic | 35.0% |
| !!! | ACAATTTGTTTTGGTCTCAC+TGG | - | chr8_1:54173723-54173742 | Msa1201010:CDS | 35.0% |
| !! | GATAATGCTTGTTGTGTTAG+TGG | + | chr8_1:54173792-54173811 | None:intergenic | 35.0% |
| ACACAAAAATGAGAAATGGG+TGG | - | chr8_1:54173815-54173834 | Msa1201010:CDS | 35.0% | |
| !!! | CATCTCTTGTTTTGCTCAAA+AGG | + | chr8_1:54173875-54173894 | None:intergenic | 35.0% |
| AGCTTCAATCTGTTCTTAGA+AGG | - | chr8_1:54173925-54173944 | Msa1201010:CDS | 35.0% | |
| GTTCTTAGAAGGAGAAAAGT+TGG | - | chr8_1:54173936-54173955 | Msa1201010:CDS | 35.0% | |
| !! | AAGGAGAAAAGTTGGTGATA+TGG | - | chr8_1:54173944-54173963 | Msa1201010:intron | 35.0% |
| AACACCAATATTCAGCAACA+TGG | + | chr8_1:54173974-54173993 | None:intergenic | 35.0% | |
| ! | CTGAATATTGGTGTTTGAGA+AGG | - | chr8_1:54173979-54173998 | Msa1201010:intron | 35.0% |
| GAATTTGAGTAAAGATGCTG+AGG | - | chr8_1:54174325-54174344 | Msa1201010:intron | 35.0% | |
| CAAGTGATTTCTCACCATAG+AGG | - | chr8_1:54164102-54164121 | Msa1201010:CDS | 40.0% | |
| CAATGCATTTCTCACCTCTA+TGG | + | chr8_1:54164119-54164138 | None:intergenic | 40.0% | |
| AGGTGAGAAATGCATTGAAG+AGG | - | chr8_1:54164122-54164141 | Msa1201010:CDS | 40.0% | |
| ! | GAAATGCATTGAAGAGGTGT+TGG | - | chr8_1:54164128-54164147 | Msa1201010:CDS | 40.0% |
| TGGATATTTGTGGCATCACT+AGG | - | chr8_1:54164169-54164188 | Msa1201010:CDS | 40.0% | |
| GGATATTTGTGGCATCACTA+GGG | - | chr8_1:54164170-54164189 | Msa1201010:CDS | 40.0% | |
| TCTCCTTAGACAAGAGTGAA+GGG | + | chr8_1:54164229-54164248 | None:intergenic | 40.0% | |
| TTCTCCTTAGACAAGAGTGA+AGG | + | chr8_1:54164230-54164249 | None:intergenic | 40.0% | |
| !! | GATCCCATCTTTGAAGCAAA+TGG | - | chr8_1:54164332-54164351 | Msa1201010:CDS | 40.0% |
| CAAAGTCAAAGACAACCAAG+TGG | - | chr8_1:54164490-54164509 | Msa1201010:CDS | 40.0% | |
| ACATGAAAGATTGGAGGCTT+TGG | - | chr8_1:54164653-54164672 | Msa1201010:CDS | 40.0% | |
| AATTGTGATGCAGTCGAAAG+TGG | - | chr8_1:54164969-54164988 | Msa1201010:intron | 40.0% | |
| ! | TTCCGGAACTCTATTTTCAC+AGG | + | chr8_1:54165054-54165073 | None:intergenic | 40.0% |
| !! | TTTAGGTTTTCGGCCCATTA+GGG | + | chr8_1:54165169-54165188 | None:intergenic | 40.0% |
| !!! | TTTTAGGTTTTCGGCCCATT+AGG | + | chr8_1:54165170-54165189 | None:intergenic | 40.0% |
| ATTGGAGGATTCAACATGCA+TGG | + | chr8_1:54165316-54165335 | None:intergenic | 40.0% | |
| TCACTGAATAGGACTCAAGA+GGG | + | chr8_1:54165352-54165371 | None:intergenic | 40.0% | |
| TTCACTGAATAGGACTCAAG+AGG | + | chr8_1:54165353-54165372 | None:intergenic | 40.0% | |
| TTTAGCCTCGACTTTAATCG+AGG | - | chr8_1:54165465-54165484 | Msa1201010:intron | 40.0% | |
| TAGTACCTCGATTAAAGTCG+AGG | + | chr8_1:54165473-54165492 | None:intergenic | 40.0% | |
| TGAAGATCTGGTGATTTCAG+TGG | - | chr8_1:54165607-54165626 | Msa1201010:intron | 40.0% | |
| TCTATAACCTGGATAGGATC+AGG | - | chr8_1:54165687-54165706 | Msa1201010:intron | 40.0% | |
| ATAGGATCAGGCATCTATTG+AGG | - | chr8_1:54165699-54165718 | Msa1201010:intron | 40.0% | |
| ATTGAGGTACACAGTCACTA+TGG | - | chr8_1:54165715-54165734 | Msa1201010:intron | 40.0% | |
| ! | AACTTTTGCCTCTGCAACAA+TGG | + | chr8_1:54165874-54165893 | None:intergenic | 40.0% |
| TTCTCCGACTCATTTAGTGA+TGG | - | chr8_1:54165946-54165965 | Msa1201010:intron | 40.0% | |
| TGGACCATCACTAAATGAGT+CGG | + | chr8_1:54165953-54165972 | None:intergenic | 40.0% | |
| AGCATCTGTCGACGAATATT+TGG | + | chr8_1:54166040-54166059 | None:intergenic | 40.0% | |
| GAGTATTCACGTCATTCTTG+AGG | - | chr8_1:54166076-54166095 | Msa1201010:intron | 40.0% | |
| AACATTGGAGACAACATCCT+TGG | + | chr8_1:54166181-54166200 | None:intergenic | 40.0% | |
| !! | CTTGAAGGTACCCATTTATC+AGG | + | chr8_1:54166223-54166242 | None:intergenic | 40.0% |
| CAATACTCAGAAAGGCTTGA+AGG | + | chr8_1:54166238-54166257 | None:intergenic | 40.0% | |
| ! | TGAGTATTGTGTTTCACGGT+GGG | - | chr8_1:54166249-54166268 | Msa1201010:intron | 40.0% |
| AACAATCAAAACATGGGAGG+TGG | + | chr8_1:54166479-54166498 | None:intergenic | 40.0% | |
| !!! | TGTTTTGACAACACAAGTGG+CGG | + | chr8_1:54166543-54166562 | None:intergenic | 40.0% |
| ! | GTTCTTTTCGTAACGTGATC+AGG | + | chr8_1:54166623-54166642 | None:intergenic | 40.0% |
| GATCACGTTACGAAAAGAAC+AGG | - | chr8_1:54166623-54166642 | Msa1201010:intron | 40.0% | |
| ! | CATTTTACTTGCAGCTAGAG+AGG | + | chr8_1:54166819-54166838 | None:intergenic | 40.0% |
| TGACTCACTTGGATATAGGA+GGG | + | chr8_1:54166937-54166956 | None:intergenic | 40.0% | |
| CGGTTATAATTAGGGACAGA+AGG | + | chr8_1:54167004-54167023 | None:intergenic | 40.0% | |
| TCCCTAATTATAACCGTCCT+TGG | - | chr8_1:54167008-54167027 | Msa1201010:intron | 40.0% | |
| CCCAAGGACGGTTATAATTA+GGG | + | chr8_1:54167012-54167031 | None:intergenic | 40.0% | |
| CCCTAATTATAACCGTCCTT+GGG | - | chr8_1:54167009-54167028 | Msa1201010:intron | 40.0% | |
| TCCCAAGGACGGTTATAATT+AGG | + | chr8_1:54167013-54167032 | None:intergenic | 40.0% | |
| ACACAATTAAAGACTGAGGG+AGG | - | chr8_1:54167347-54167366 | Msa1201010:intron | 40.0% | |
| CACAATTAAAGACTGAGGGA+GGG | - | chr8_1:54167348-54167367 | Msa1201010:intron | 40.0% | |
| !! | AATGTTAACTTGTGCCCTCA+GGG | + | chr8_1:54167802-54167821 | None:intergenic | 40.0% |
| !! | AAATGTTAACTTGTGCCCTC+AGG | + | chr8_1:54167803-54167822 | None:intergenic | 40.0% |
| AGAGTCAAAGATAAGGATGG+GGG | + | chr8_1:54167986-54168005 | None:intergenic | 40.0% | |
| GAGAGTCAAAGATAAGGATG+GGG | + | chr8_1:54167987-54168006 | None:intergenic | 40.0% | |
| TAAGTGTATGTTTGGTACGG+CGG | - | chr8_1:54168247-54168266 | Msa1201010:intron | 40.0% | |
| ! | CAGGTTGAGGAAGGAATTAT+TGG | + | chr8_1:54168901-54168920 | None:intergenic | 40.0% |
| CAATAATTCCTTCCTCAACC+TGG | - | chr8_1:54168899-54168918 | Msa1201010:intron | 40.0% | |
| ATTGCAGTTCTGCAACTGAT+AGG | - | chr8_1:54168924-54168943 | Msa1201010:intron | 40.0% | |
| GGGTAATAAAGGAAGAAAGG+GGG | - | chr8_1:54169089-54169108 | Msa1201010:intron | 40.0% | |
| ! | TTAAGCTTACTTGGTAGCCA+AGG | + | chr8_1:54169435-54169454 | None:intergenic | 40.0% |
| GGCTACCAAGTAAGCTTAAA+AGG | - | chr8_1:54169436-54169455 | Msa1201010:intron | 40.0% | |
| AAGAGGAGGGTAATGTTGAA+GGG | + | chr8_1:54169887-54169906 | None:intergenic | 40.0% | |
| AAAGAGGAGGGTAATGTTGA+AGG | + | chr8_1:54169888-54169907 | None:intergenic | 40.0% | |
| !! | AAGCCACTTGAAAGTGTTTC+TGG | - | chr8_1:54170020-54170039 | Msa1201010:intron | 40.0% |
| TAGCCAGAAACACTTTCAAG+TGG | + | chr8_1:54170026-54170045 | None:intergenic | 40.0% | |
| !! | GGCTTGATTTGGTCAATTGA+AGG | + | chr8_1:54170158-54170177 | None:intergenic | 40.0% |
| GTTTGGGCATATGGATGAAT+CGG | - | chr8_1:54170472-54170491 | Msa1201010:intron | 40.0% | |
| !! | CATCTCGTTTTAGTGGTTGA+AGG | - | chr8_1:54170614-54170633 | Msa1201010:intron | 40.0% |
| TAGATGTGTCATCATGCGTT+AGG | - | chr8_1:54171242-54171261 | Msa1201010:intron | 40.0% | |
| TGTTGTCACGTCCAATTCAA+TGG | - | chr8_1:54171271-54171290 | Msa1201010:intron | 40.0% | |
| GTTGTCACGTCCAATTCAAT+GGG | - | chr8_1:54171272-54171291 | Msa1201010:intron | 40.0% | |
| !! | ATTTTGGCACAATTCATGGG+TGG | + | chr8_1:54171781-54171800 | None:intergenic | 40.0% |
| !! | CTGCATTTTGGCACAATTCA+TGG | + | chr8_1:54171785-54171804 | None:intergenic | 40.0% |
| GTGCCAAAATGCAGATCTAA+CGG | - | chr8_1:54171791-54171810 | Msa1201010:intron | 40.0% | |
| ! | TCGTGGGTTATTCTTGAACT+TGG | - | chr8_1:54171825-54171844 | Msa1201010:intron | 40.0% |
| CGAGATTGGATATGTGTGTA+AGG | - | chr8_1:54171897-54171916 | Msa1201010:intron | 40.0% | |
| GGCAGGTTGTAATCCTTAAA+AGG | - | chr8_1:54172006-54172025 | Msa1201010:intron | 40.0% | |
| GATGTACGTGGCTAAAATCA+TGG | - | chr8_1:54172454-54172473 | Msa1201010:intron | 40.0% | |
| ACTAGACAAAGAGCCAAAGA+TGG | + | chr8_1:54172667-54172686 | None:intergenic | 40.0% | |
| !! | TCAAAAGAGAGTGTTGCTAG+TGG | + | chr8_1:54172967-54172986 | None:intergenic | 40.0% |
| TATGTCCCACCACTTTATGT+GGG | - | chr8_1:54172876-54172895 | Msa1201010:intron | 40.0% | |
| GAAATGGAACCCACATAAAG+TGG | + | chr8_1:54172888-54172907 | None:intergenic | 40.0% | |
| !! | AGTTTCAAGGTTGATGCAGA+AGG | - | chr8_1:54174217-54174236 | Msa1201010:CDS | 40.0% |
| !! | GTTTCAAGGTTGATGCAGAA+GGG | - | chr8_1:54174218-54174237 | Msa1201010:CDS | 40.0% |
| GAGAAGATTCAATCTGCACA+TGG | - | chr8_1:54174350-54174369 | Msa1201010:intron | 40.0% | |
| AGATTCAATCTGCACATGGA+AGG | - | chr8_1:54174354-54174373 | Msa1201010:CDS | 40.0% | |
| ACATGGAAGGTTAGAAGCTT+TGG | - | chr8_1:54174367-54174386 | Msa1201010:CDS | 40.0% | |
| GTGCTAGGATGAGATCTAGA+AGG | + | chr8_1:54163943-54163962 | None:intergenic | 45.0% | |
| AACAAGCTCAAGACATGGGA+AGG | - | chr8_1:54163985-54164004 | Msa1201010:CDS | 45.0% | |
| AAGCCCTTCACTCTTGTCTA+AGG | - | chr8_1:54164223-54164242 | Msa1201010:CDS | 45.0% | |
| TGGAGGAGACTAATGTAGGA+GGG | + | chr8_1:54165248-54165267 | None:intergenic | 45.0% | |
| GAACTCGAGGTTGAGTTCTT+CGG | + | chr8_1:54165274-54165293 | None:intergenic | 45.0% | |
| GGTGGTCTATTGTTCATTGG+AGG | + | chr8_1:54165331-54165350 | None:intergenic | 45.0% | |
| GAGGGTGGTCTATTGTTCAT+TGG | + | chr8_1:54165334-54165353 | None:intergenic | 45.0% | |
| CATGTAGCAACATGTCGATC+CGG | - | chr8_1:54165556-54165575 | Msa1201010:intron | 45.0% | |
| !!! | TGTCGATCCGGTGGTTTTTT+CGG | - | chr8_1:54165568-54165587 | Msa1201010:intron | 45.0% |
| ATAGATGCCTGATCCTATCC+AGG | + | chr8_1:54165697-54165716 | None:intergenic | 45.0% | |
| GATTCACTTCCCTAGTGTGA+AGG | + | chr8_1:54165756-54165775 | None:intergenic | 45.0% | |
| CACACTAGGGAAGTGAATCA+TGG | - | chr8_1:54165757-54165776 | Msa1201010:intron | 45.0% | |
| ATCCTCTTCCATTGTTGCAG+AGG | - | chr8_1:54165863-54165882 | Msa1201010:intron | 45.0% | |
| TATTCGTCGACAGATGCTAG+AGG | - | chr8_1:54166042-54166061 | Msa1201010:intron | 45.0% | |
| ! | CTGAGTATTGTGTTTCACGG+TGG | - | chr8_1:54166248-54166267 | Msa1201010:intron | 45.0% |
| ! | GAGTATTGTGTTTCACGGTG+GGG | - | chr8_1:54166250-54166269 | Msa1201010:intron | 45.0% |
| TTCAAGTCACCGCGTATTAG+TGG | + | chr8_1:54166277-54166296 | None:intergenic | 45.0% | |
| ATGACGAAAGCAGAGCTTGA+AGG | + | chr8_1:54166584-54166603 | None:intergenic | 45.0% | |
| TTCGTAACGTGATCAGGCAT+GGG | + | chr8_1:54166617-54166636 | None:intergenic | 45.0% | |
| TTTCGTAACGTGATCAGGCA+TGG | + | chr8_1:54166618-54166637 | None:intergenic | 45.0% | |
| ! | CTAAGGAAACCCTAATGGAC+CGG | - | chr8_1:54166847-54166866 | Msa1201010:intron | 45.0% |
| ! | TAAGGAAACCCTAATGGACC+GGG | - | chr8_1:54166848-54166867 | Msa1201010:intron | 45.0% |
| TTTGGATTCCCGGTCCATTA+GGG | + | chr8_1:54166859-54166878 | None:intergenic | 45.0% | |
| ! | TTTTGGATTCCCGGTCCATT+AGG | + | chr8_1:54166860-54166879 | None:intergenic | 45.0% |
| GTGACTCACTTGGATATAGG+AGG | + | chr8_1:54166938-54166957 | None:intergenic | 45.0% | |
| !! | ATGTTAACTTGTGCCCTCAG+GGG | + | chr8_1:54167801-54167820 | None:intergenic | 45.0% |
| ! | AGAGGGGAGCATAGAGAAAT+GGG | + | chr8_1:54167881-54167900 | None:intergenic | 45.0% |
| AGAAGAAAGAGTGGGAGAGA+GGG | + | chr8_1:54167898-54167917 | None:intergenic | 45.0% | |
| GAGAGAGGAAAGATACGAGA+GGG | + | chr8_1:54167952-54167971 | None:intergenic | 45.0% | |
| AAGGATGGGGGAGATAGTAT+GGG | + | chr8_1:54167974-54167993 | None:intergenic | 45.0% | |
| TAAGGATGGGGGAGATAGTA+TGG | + | chr8_1:54167975-54167994 | None:intergenic | 45.0% | |
| AGTTCTGCAACTGATAGGCA+TGG | - | chr8_1:54168929-54168948 | Msa1201010:intron | 45.0% | |
| CGGCTGAGTAAAAGAAAACC+AGG | - | chr8_1:54168952-54168971 | Msa1201010:intron | 45.0% | |
| ACCGCAAAAGCTAGGATTTG+TGG | - | chr8_1:54169159-54169178 | Msa1201010:intron | 45.0% | |
| !! | GCCACAAATCCTAGCTTTTG+CGG | + | chr8_1:54169163-54169182 | None:intergenic | 45.0% |
| AAACAGGCACTAAGTGTAGC+CGG | - | chr8_1:54169307-54169326 | Msa1201010:intron | 45.0% | |
| TGTAGCCGGCAGAATTGATT+TGG | - | chr8_1:54169321-54169340 | Msa1201010:intron | 45.0% | |
| ! | CCTTTTCTTGGATTGAGCGA+CGG | + | chr8_1:54169673-54169692 | None:intergenic | 45.0% |
| ! | TGGACAGCATGTGTTGATCA+AGG | + | chr8_1:54169700-54169719 | None:intergenic | 45.0% |
| !! | AGTGTTTCTGGCTACTGCTT+AGG | - | chr8_1:54170032-54170051 | Msa1201010:intron | 45.0% |
| !! | TTTCTGGCTACTGCTTAGGT+AGG | - | chr8_1:54170036-54170055 | Msa1201010:intron | 45.0% |
| CAGCTGCGAATCTGATGAAT+AGG | - | chr8_1:54171047-54171066 | Msa1201010:intron | 45.0% | |
| ATATAAAGGCCGGCACAGTT+TGG | - | chr8_1:54171302-54171321 | Msa1201010:intron | 45.0% | |
| CCAATTAGTCCAAACTGTGC+CGG | + | chr8_1:54171314-54171333 | None:intergenic | 45.0% | |
| TTTAACATGCTGCGAGCAAG+TGG | + | chr8_1:54171347-54171366 | None:intergenic | 45.0% | |
| ! | GCACCGTTAGATCTGCATTT+TGG | + | chr8_1:54171797-54171816 | None:intergenic | 45.0% |
| AAATGCAGATCTAACGGTGC+TGG | - | chr8_1:54171797-54171816 | Msa1201010:intron | 45.0% | |
| CATTCATTCACACCCGAGAT+TGG | - | chr8_1:54171883-54171902 | Msa1201010:intron | 45.0% | |
| ACCATGTCACAAGATGTACG+TGG | - | chr8_1:54172442-54172461 | Msa1201010:intron | 45.0% | |
| !! | AAGAGAGTGTTGCTAGTGGT+GGG | + | chr8_1:54172809-54172828 | None:intergenic | 45.0% |
| !! | AAAGAGAGTGTTGCTAGTGG+TGG | + | chr8_1:54172810-54172829 | None:intergenic | 45.0% |
| GTATGTCCCACCACTTTATG+TGG | - | chr8_1:54172875-54172894 | Msa1201010:intron | 45.0% | |
| TGGAACCCACATAAAGTGGT+GGG | + | chr8_1:54172884-54172903 | None:intergenic | 45.0% | |
| ATGGAACCCACATAAAGTGG+TGG | + | chr8_1:54172885-54172904 | None:intergenic | 45.0% | |
| GGGTTCCATTTCCAAAGTGT+AGG | - | chr8_1:54172896-54172915 | Msa1201010:intron | 45.0% | |
| ! | TGGGTCCTACACTTTGGAAA+TGG | + | chr8_1:54172904-54172923 | None:intergenic | 45.0% |
| TCAATGTGGGTCCTACACTT+TGG | + | chr8_1:54172910-54172929 | None:intergenic | 45.0% | |
| GTGCTTGGATGTGATCTTGT+TGG | + | chr8_1:54173630-54173649 | None:intergenic | 45.0% | |
| ! | TTGATGCAGAAGGGTGTGTT+TGG | - | chr8_1:54174227-54174246 | Msa1201010:CDS | 45.0% |
| ! | TGGAAGGTTAGAAGCTTTGG+TGG | - | chr8_1:54174370-54174389 | Msa1201010:CDS | 45.0% |
| ! | AAGGTTAGAAGCTTTGGTGG+TGG | - | chr8_1:54174373-54174392 | Msa1201010:CDS | 45.0% |
| !!! | TTTGTTTTTTTAATAAAAAA+GGG | + | chr8_1:54168202-54168221 | None:intergenic | 5.0% |
| !!! | TTTTGTTTTTTTAATAAAAA+AGG | + | chr8_1:54168203-54168222 | None:intergenic | 5.0% |
| !!! | TTATTTTTAATCTATAATTA+AGG | + | chr8_1:54168711-54168730 | None:intergenic | 5.0% |
| !! | AATTATAGATTAAAAATAAT+AGG | - | chr8_1:54168712-54168731 | Msa1201010:intron | 5.0% |
| !! | CATAAAAATTTATATATTTA+AGG | + | chr8_1:54173244-54173263 | None:intergenic | 5.0% |
| GCAGGCTGCACATGAAAGAT+TGG | - | chr8_1:54164644-54164663 | Msa1201010:CDS | 50.0% | |
| GGCTGCACATGAAAGATTGG+AGG | - | chr8_1:54164647-54164666 | Msa1201010:CDS | 50.0% | |
| TGTGATGCAGTCGAAAGTGG+AGG | - | chr8_1:54164972-54164991 | Msa1201010:intron | 50.0% | |
| GTGGAGGAGACTAATGTAGG+AGG | + | chr8_1:54165249-54165268 | None:intergenic | 50.0% | |
| GAGGTGGAGGAGACTAATGT+AGG | + | chr8_1:54165252-54165271 | None:intergenic | 50.0% | |
| CTGAATAGGACTCAAGAGGG+TGG | + | chr8_1:54165349-54165368 | None:intergenic | 50.0% | |
| AATTCCAACCACTCGCGGAT+TGG | + | chr8_1:54165501-54165520 | None:intergenic | 50.0% | |
| GGTGATTTCAGTGGCAGAGA+TGG | - | chr8_1:54165616-54165635 | Msa1201010:intron | 50.0% | |
| TGCCTCTGCAACAATGGAAG+AGG | + | chr8_1:54165868-54165887 | None:intergenic | 50.0% | |
| CTTCAGTTCACTACGAGCCA+AGG | - | chr8_1:54166161-54166180 | Msa1201010:intron | 50.0% | |
| GGTGACTTGAATACGAGAGG+TGG | - | chr8_1:54166286-54166305 | Msa1201010:intron | 50.0% | |
| CTAGCACGTGGAACCCTAAT+TGG | - | chr8_1:54166452-54166471 | Msa1201010:intron | 50.0% | |
| CATGGGAGGTGGACCAATTA+GGG | + | chr8_1:54166468-54166487 | None:intergenic | 50.0% | |
| ACATGGGAGGTGGACCAATT+AGG | + | chr8_1:54166469-54166488 | None:intergenic | 50.0% | |
| TGCTCTGATACCACCTGACA+CGG | - | chr8_1:54166653-54166672 | Msa1201010:intron | 50.0% | |
| TTCCTTAACATGTCCCCCTG+AGG | - | chr8_1:54167784-54167803 | Msa1201010:intron | 50.0% | |
| TCCTTAACATGTCCCCCTGA+GGG | - | chr8_1:54167785-54167804 | Msa1201010:intron | 50.0% | |
| !! | TGTTAACTTGTGCCCTCAGG+GGG | + | chr8_1:54167800-54167819 | None:intergenic | 50.0% |
| ! | GAGGGGAGCATAGAGAAATG+GGG | + | chr8_1:54167880-54167899 | None:intergenic | 50.0% |
| ! | GAGAGGGGAGCATAGAGAAA+TGG | + | chr8_1:54167882-54167901 | None:intergenic | 50.0% |
| GAAGAAAGAGTGGGAGAGAG+GGG | + | chr8_1:54167897-54167916 | None:intergenic | 50.0% | |
| GAGAAGAAAGAGTGGGAGAG+AGG | + | chr8_1:54167899-54167918 | None:intergenic | 50.0% | |
| AGGAAAGATACGAGAGGGAG+GGG | + | chr8_1:54167947-54167966 | None:intergenic | 50.0% | |
| GAGGAAAGATACGAGAGGGA+GGG | + | chr8_1:54167948-54167967 | None:intergenic | 50.0% | |
| AGAGGAAAGATACGAGAGGG+AGG | + | chr8_1:54167949-54167968 | None:intergenic | 50.0% | |
| GGAGAGAGGAAAGATACGAG+AGG | + | chr8_1:54167953-54167972 | None:intergenic | 50.0% | |
| TGTATGTTTGGTACGGCGGT+GGG | - | chr8_1:54168251-54168270 | Msa1201010:intron | 50.0% | |
| ! | TGCAATCACCAGGTTGAGGA+AGG | + | chr8_1:54168910-54168929 | None:intergenic | 50.0% |
| GAACTGCAATCACCAGGTTG+AGG | + | chr8_1:54168914-54168933 | None:intergenic | 50.0% | |
| GTTGCAGAACTGCAATCACC+AGG | + | chr8_1:54168920-54168939 | None:intergenic | 50.0% | |
| TCTGCAACTGATAGGCATGG+CGG | - | chr8_1:54168932-54168951 | Msa1201010:intron | 50.0% | |
| ! | AGGTTTCAGAGCTTTTGCCG+TGG | + | chr8_1:54169260-54169279 | None:intergenic | 50.0% |
| ! | TTAGTGCCTGTTTGGTTCCG+CGG | + | chr8_1:54169300-54169319 | None:intergenic | 50.0% |
| GGCTACACTTAGTGCCTGTT+TGG | + | chr8_1:54169308-54169327 | None:intergenic | 50.0% | |
| CCGTCGCTCAATCCAAGAAA+AGG | - | chr8_1:54169670-54169689 | Msa1201010:intron | 50.0% | |
| CCGGCACAGTTTGGACTAAT+TGG | - | chr8_1:54171311-54171330 | Msa1201010:intron | 50.0% | |
| CTTGCATGCAGTATGTGTCG+TGG | + | chr8_1:54171722-54171741 | None:intergenic | 50.0% | |
| !! | GGGTGGTGGGCAAAATACAT+GGG | + | chr8_1:54171764-54171783 | None:intergenic | 50.0% |
| !! | TGGGTGGTGGGCAAAATACA+TGG | + | chr8_1:54171765-54171784 | None:intergenic | 50.0% |
| TGGCACAATTCATGGGTGGT+GGG | + | chr8_1:54171777-54171796 | None:intergenic | 50.0% | |
| TTGGCACAATTCATGGGTGG+TGG | + | chr8_1:54171778-54171797 | None:intergenic | 50.0% | |
| !! | TAACGGTGCTGGTTCTTTCG+TGG | - | chr8_1:54171808-54171827 | Msa1201010:intron | 50.0% |
| !! | AACGGTGCTGGTTCTTTCGT+GGG | - | chr8_1:54171809-54171828 | Msa1201010:intron | 50.0% |
| GCCACGTACATCTTGTGACA+TGG | + | chr8_1:54172446-54172465 | None:intergenic | 50.0% | |
| GAAGATAGAGGCAGATGCAG+AGG | - | chr8_1:54172477-54172496 | Msa1201010:intron | 50.0% | |
| !! | GCTTTGGTGGTGGCTATTGA+AGG | - | chr8_1:54174383-54174402 | Msa1201010:CDS | 50.0% |
| GTTGAGTTCTTCGGAGGTGG+AGG | + | chr8_1:54165265-54165284 | None:intergenic | 55.0% | |
| GAGGTTGAGTTCTTCGGAGG+TGG | + | chr8_1:54165268-54165287 | None:intergenic | 55.0% | |
| CTCGAGGTTGAGTTCTTCGG+AGG | + | chr8_1:54165271-54165290 | None:intergenic | 55.0% | |
| CTAGATGACCAATCCGCGAG+TGG | - | chr8_1:54165490-54165509 | Msa1201010:intron | 55.0% | |
| ATGACCAATCCGCGAGTGGT+TGG | - | chr8_1:54165494-54165513 | Msa1201010:intron | 55.0% | |
| GTAGCAACATGTCGATCCGG+TGG | - | chr8_1:54165559-54165578 | Msa1201010:intron | 55.0% | |
| !!! | TCCGGTGGTTTTTTCGGCAG+CGG | - | chr8_1:54165574-54165593 | Msa1201010:intron | 55.0% |
| CGCGGTGACTTGAATACGAG+AGG | - | chr8_1:54166283-54166302 | Msa1201010:intron | 55.0% | |
| AGTGGCGGCGTTAACAACTC+AGG | + | chr8_1:54166528-54166547 | None:intergenic | 55.0% | |
| ATGCTTCTGACCGTGTCAGG+TGG | + | chr8_1:54166666-54166685 | None:intergenic | 55.0% | |
| CCTATGCTTCTGACCGTGTC+AGG | + | chr8_1:54166669-54166688 | None:intergenic | 55.0% | |
| ! | CCTGACACGGTCAGAAGCAT+AGG | - | chr8_1:54166666-54166685 | Msa1201010:intron | 55.0% |
| GGAAAGATACGAGAGGGAGG+GGG | + | chr8_1:54167946-54167965 | None:intergenic | 55.0% | |
| GGGGAGATAGTATGGGAGAG+AGG | + | chr8_1:54167967-54167986 | None:intergenic | 55.0% | |
| GTGTATGTTTGGTACGGCGG+TGG | - | chr8_1:54168250-54168269 | Msa1201010:intron | 55.0% | |
| CCATATTCACCCAGCATCCC+TGG | + | chr8_1:54168989-54169008 | None:intergenic | 55.0% | |
| CCAGGGATGCTGGGTGAATA+TGG | - | chr8_1:54168986-54169005 | Msa1201010:intron | 55.0% | |
| GGCTACTGCTTAGGTAGGAG+TGG | - | chr8_1:54170041-54170060 | Msa1201010:intron | 55.0% | |
| AGAGGCAGATGCAGAGGATC+AGG | - | chr8_1:54172483-54172502 | Msa1201010:intron | 55.0% | |
| GAGGCAGATGCAGAGGATCA+GGG | - | chr8_1:54172484-54172503 | Msa1201010:intron | 55.0% | |
| GCCGCTGCCGAAAAAACCAC+CGG | + | chr8_1:54165578-54165597 | None:intergenic | 60.0% | |
| !!! | GGTGGTTTTTTCGGCAGCGG+CGG | - | chr8_1:54165577-54165596 | Msa1201010:intron | 60.0% |
| GGCGGTGGCGATTGAAGATC+TGG | - | chr8_1:54165595-54165614 | Msa1201010:intron | 60.0% | |
| CGGTGGGGACCACTAATACG+CGG | - | chr8_1:54166265-54166284 | Msa1201010:intron | 60.0% | |
| GCCCTCAGGGGGACATGTTA+AGG | + | chr8_1:54167789-54167808 | None:intergenic | 60.0% | |
| TGCGGCTCACCGCAAAAGCT+AGG | - | chr8_1:54169151-54169170 | Msa1201010:intron | 60.0% | |
| CGGTGGGAACGCTTAAACGC+AGG | + | chr8_1:54169280-54169299 | None:intergenic | 60.0% | |
| GCGTTTAAGCGTTCCCACCG+CGG | - | chr8_1:54169280-54169299 | Msa1201010:intron | 60.0% | |
| TTCCCACCGCGGAACCAAAC+AGG | - | chr8_1:54169291-54169310 | Msa1201010:intron | 60.0% | |
| ! | TGCCTGTTTGGTTCCGCGGT+GGG | + | chr8_1:54169296-54169315 | None:intergenic | 60.0% |
| !!! | GGTTTTTTCGGCAGCGGCGG+TGG | - | chr8_1:54165580-54165599 | Msa1201010:intron | 65.0% |
| CGAGAGGGAGGGGGAAGTAG+AGG | + | chr8_1:54167937-54167956 | None:intergenic | 65.0% | |
| ! | GTGCCTGTTTGGTTCCGCGG+TGG | + | chr8_1:54169297-54169316 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 54163904 | 54174484 | 54163904 | ID=Msa1201010;Name=Msa1201010 |
| chr8_1 | mRNA | 54163904 | 54174484 | 54163904 | ID=Msa1201010-mRNA-1;Parent=Msa1201010;Name=Msa1201010-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|0|0|1|0|0|5|0|517 |
| chr8_1 | exon | 54174352 | 54174484 | 54174352 | ID=Msa1201010-mRNA-1:exon:17365;Parent=Msa1201010-mRNA-1 |
| chr8_1 | exon | 54174031 | 54174264 | 54174031 | ID=Msa1201010-mRNA-1:exon:17364;Parent=Msa1201010-mRNA-1 |
| chr8_1 | exon | 54173770 | 54173961 | 54173770 | ID=Msa1201010-mRNA-1:exon:17363;Parent=Msa1201010-mRNA-1 |
| chr8_1 | exon | 54173686 | 54173763 | 54173686 | ID=Msa1201010-mRNA-1:exon:17362;Parent=Msa1201010-mRNA-1 |
| chr8_1 | exon | 54163904 | 54164820 | 54163904 | ID=Msa1201010-mRNA-1:exon:17361;Parent=Msa1201010-mRNA-1 |
| chr8_1 | CDS | 54174352 | 54174484 | 54174352 | ID=Msa1201010-mRNA-1:cds;Parent=Msa1201010-mRNA-1 |
| chr8_1 | CDS | 54174031 | 54174264 | 54174031 | ID=Msa1201010-mRNA-1:cds;Parent=Msa1201010-mRNA-1 |
| chr8_1 | CDS | 54173770 | 54173961 | 54173770 | ID=Msa1201010-mRNA-1:cds;Parent=Msa1201010-mRNA-1 |
| chr8_1 | CDS | 54173686 | 54173763 | 54173686 | ID=Msa1201010-mRNA-1:cds;Parent=Msa1201010-mRNA-1 |
| chr8_1 | CDS | 54163904 | 54164820 | 54163904 | ID=Msa1201010-mRNA-1:cds;Parent=Msa1201010-mRNA-1 |
| Gene Sequence |
| Protein sequence |
