AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0017390

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017390 MtrunA17_Chr1g0169181 86.162 766 40 7 1 700 1 766 0.0 1259
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0017390 AT3G23980.1 47.205 483 190 8 274 700 241 714 2.64e-124 386

Find 189 sgRNAs with CRISPR-Local

Find 737 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTGGTTCTGAATT+TGG 0.040687 1_1:-28784195 None:intergenic
TCTTCACATGGTTCGGTTTC+TGG 0.073450 1_1:+28786792 Msa0017390:CDS
CTCTTCTTGGTTCTGAATTT+GGG 0.092130 1_1:-28784194 None:intergenic
CTCTTCAAATTTCTTCAATT+TGG 0.103048 1_1:+28784368 Msa0017390:five_prime_UTR
GCACAGGCTGTTTCTGATTT+TGG 0.108677 1_1:-28786188 None:intergenic
TTCCATATATGCAATTATTT+TGG 0.155948 1_1:+28796209 Msa0017390:three_prime_UTR
TTAATAAATGAATAATAATT+TGG 0.168319 1_1:-28784131 None:intergenic
TGCAGATTTCTCTCTCTTCT+TGG 0.176182 1_1:-28784207 None:intergenic
ACTACTCAAAACATGGTTAA+TGG 0.192030 1_1:+28795445 Msa0017390:CDS
GGGTCTGGACCTCAAGTTTC+CGG 0.192845 1_1:-28795405 None:intergenic
TTGAAAATTGAAACGTTAAA+AGG 0.212207 1_1:-28784313 None:intergenic
TAACCAATGGAATCATATTT+AGG 0.224019 1_1:-28787013 None:intergenic
TTCCAAAATAATTGCATATA+TGG 0.228349 1_1:-28796211 None:intergenic
TCTACATCTACCGAGGATTT+AGG 0.246320 1_1:+28793042 Msa0017390:CDS
AGTATTTCCTTTCAAATAAC+TGG 0.248186 1_1:-28796484 None:intergenic
ACGAAAATGTATAAAGCTAT+TGG 0.248791 1_1:+28795965 Msa0017390:three_prime_UTR
GAAACTACACATTCATCTTT+TGG 0.250935 1_1:+28793683 Msa0017390:CDS
GCAAAATTCTTCAAAAGAAA+TGG 0.265858 1_1:+28796154 Msa0017390:three_prime_UTR
AAAGATGAATGTGTAGTTTC+AGG 0.266863 1_1:-28793680 None:intergenic
TAGTGTCTTCAGGTGGCTTA+TGG 0.274534 1_1:-28787240 None:intergenic
TCCGTTGATGTTGAATTTAT+TGG 0.276314 1_1:-28787064 None:intergenic
ACAGAATTGTTACTCTTGTT+TGG 0.277700 1_1:-28786648 None:intergenic
CCCGTTCCCACAAAGCTTCT+TGG 0.279682 1_1:-28796317 None:intergenic
TGATGAGCGTGCCAAGTTAT+TGG 0.288852 1_1:+28789335 Msa0017390:CDS
GGTTAAACAAATTCACATTC+TGG 0.291107 1_1:-28786299 None:intergenic
AATGAAACAAATGATATATA+TGG 0.294067 1_1:+28786489 Msa0017390:CDS
CTTTGCCTTGGTTGGCATAC+TGG 0.297755 1_1:-28796009 None:intergenic
GGCTCTCTCTCTTCTGTCTC+TGG 0.305635 1_1:-28784110 None:intergenic
TAGTCAAAAGCTCTAATCTT+TGG 0.309700 1_1:-28795426 None:intergenic
GCCAGAGGATGCAGTCTTCT+TGG 0.312652 1_1:-28786142 None:intergenic
TTCAAATTGATTCTGCGATC+TGG 0.314491 1_1:+28784339 Msa0017390:five_prime_UTR
ACTAGTCAGTCCAGCCTTCA+TGG 0.315047 1_1:+28786609 Msa0017390:CDS
TTAATGAGACGTGGAACTTT+TGG 0.316337 1_1:+28796350 Msa0017390:three_prime_UTR
TCTTGCTCAGGTTGATAAAA+TGG 0.320209 1_1:-28787157 None:intergenic
CGCTGGTTCTTTGCCTTGGT+TGG 0.335802 1_1:-28796017 None:intergenic
AAAGAAGATGTTGCTGTCTA+AGG 0.339145 1_1:+28792963 Msa0017390:CDS
ATGATAAGTGCTAAGGAAAA+TGG 0.341352 1_1:+28787328 Msa0017390:CDS
AACTACTATTGCACAAAACT+TGG 0.341490 1_1:-28796277 None:intergenic
TTTGAAAGCTGTTTATTGAT+TGG 0.344259 1_1:+28796183 Msa0017390:three_prime_UTR
TGACCCGTTACTCATGGATC+TGG 0.350602 1_1:-28796049 None:intergenic
TTCTAAATGACTAAACTTAG+AGG 0.351500 1_1:-28787182 None:intergenic
TATTATAGTTTCATTATACT+TGG 0.354225 1_1:-28796459 None:intergenic
GTTCGAGTTAATGAGTTAGA+TGG 0.361536 1_1:+28786222 Msa0017390:CDS
TTCTCAAATGGCGTCGGCTC+AGG 0.367856 1_1:+28784473 Msa0017390:exon
GGTCTGGACCTCAAGTTTCC+GGG 0.375907 1_1:-28795404 None:intergenic
CCAAGAAGCTTTGTGGGAAC+GGG 0.381558 1_1:+28796317 Msa0017390:three_prime_UTR
CAAAATTCTTCAAAAGAAAT+GGG 0.386735 1_1:+28796155 Msa0017390:three_prime_UTR
TAGGTAGTGGAAAGAGTGTT+GGG 0.387141 1_1:+28795850 Msa0017390:intron
TCTAAGGTACGAAAGGCTTC+AGG 0.388140 1_1:+28792979 Msa0017390:CDS
ATTTATTGGTGAATGGTTAG+AGG 0.390404 1_1:-28787050 None:intergenic
AACTTAGAGGCGTCTTGCTC+AGG 0.391985 1_1:-28787169 None:intergenic
CGAAAATGTATAAAGCTATT+GGG 0.393453 1_1:+28795966 Msa0017390:three_prime_UTR
TAGTGGCTCTTCACATGGTT+CGG 0.395243 1_1:+28786785 Msa0017390:CDS
AGTGATTTGCCTAGTCTTCA+TGG 0.398609 1_1:+28786980 Msa0017390:CDS
AGTCTTCTTGGCCCGCTCTT+CGG 0.399061 1_1:-28786130 None:intergenic
CAAATCACTATCAGATCTAA+TGG 0.399113 1_1:-28786966 None:intergenic
AAGACCCTTGATTACTACTT+TGG 0.399332 1_1:-28786320 None:intergenic
GTACGAAAGGCTTCAGGATT+CGG 0.402189 1_1:+28792985 Msa0017390:CDS
AATTGTTACTCTTGTTTGGC+TGG 0.402249 1_1:-28786644 None:intergenic
ATCCGAAGTCATTGGCTTAG+AGG 0.414659 1_1:+28789359 Msa0017390:CDS
CTCTCTCTCTCGATCAGATC+GGG 0.417054 1_1:+28784259 Msa0017390:five_prime_UTR
AATTCTAGCACTTTGGATAG+TGG 0.418051 1_1:+28786768 Msa0017390:CDS
AGTCAAAAGCTCTAATCTTT+GGG 0.418246 1_1:-28795425 None:intergenic
GCCAAGAAGACTGCATCCTC+TGG 0.420613 1_1:+28786141 Msa0017390:CDS
CAATCAATTGAAATCAGAAA+TGG 0.420675 1_1:+28788944 Msa0017390:CDS
AAGCAGAAATTTCTTCATAC+AGG 0.424586 1_1:+28790648 Msa0017390:CDS
TGGATTATGAAGCTATTTCC+TGG 0.428453 1_1:+28795874 Msa0017390:CDS
TCCATTCATTCCATGAAGGC+TGG 0.430594 1_1:-28786619 None:intergenic
ATGTGTAGTTTCAGGAACTA+TGG 0.430689 1_1:-28793672 None:intergenic
AATGCGCTGGTTCTTTGCCT+TGG 0.438881 1_1:-28796021 None:intergenic
ACCTTCTTGAAGAGCATCAA+TGG 0.439176 1_1:-28791541 None:intergenic
AGCCGACGCCATTTGAGAAA+AGG 0.440203 1_1:-28784469 None:intergenic
TCAAATTGATTCTGCGATCT+GGG 0.440785 1_1:+28784340 Msa0017390:five_prime_UTR
AAATGTTGCTAGACCTTCTA+CGG 0.445970 1_1:+28787129 Msa0017390:CDS
TGCATGCGTTACAGTCAATC+AGG 0.445988 1_1:-28796589 None:intergenic
AGAAGAATTGATGAAATCCT+TGG 0.447637 1_1:+28794017 Msa0017390:CDS
TCATACGTAACACGAGAATC+TGG 0.451777 1_1:-28795496 None:intergenic
AGGCTACCAAGAAGCTTTGT+GGG 0.452765 1_1:+28796311 Msa0017390:three_prime_UTR
GCCGACGCCATTTGAGAAAA+GGG 0.455781 1_1:-28784468 None:intergenic
TCAAGCAGCAATGACACATC+AGG 0.457870 1_1:+28787205 Msa0017390:CDS
GCCGACAAATTCTAGCACTT+TGG 0.465447 1_1:+28786761 Msa0017390:CDS
TCCAAAGTGCTAGAATTTGT+CGG 0.465999 1_1:-28786762 None:intergenic
TTAGGTAGTGGAAAGAGTGT+TGG 0.470028 1_1:+28795849 Msa0017390:intron
AAGCAAGAGCATCTCGAAGC+TGG 0.470034 1_1:+28784501 Msa0017390:CDS
TCCAGCCTTCATGGAATGAA+TGG 0.470214 1_1:+28786618 Msa0017390:CDS
AACCCAGATCCATGAGTAAC+GGG 0.470970 1_1:+28796046 Msa0017390:three_prime_UTR
ATTGTCATTGATTTCTGTGT+TGG 0.472642 1_1:-28793615 None:intergenic
ATGTTGAATTTATTGGTGAA+TGG 0.472862 1_1:-28787057 None:intergenic
ACCAAGAAGCTTTGTGGGAA+CGG 0.475945 1_1:+28796316 Msa0017390:three_prime_UTR
AAAGCTCTAATCTTTGGGTC+TGG 0.476751 1_1:-28795420 None:intergenic
GAGGCTACCAAGAAGCTTTG+TGG 0.481237 1_1:+28796310 Msa0017390:three_prime_UTR
CTTTGCTGACCCGTTACTCA+TGG 0.485656 1_1:-28796055 None:intergenic
TTTAGAGAATCAAGAAAAGA+TGG 0.488430 1_1:-28787109 None:intergenic
TTAAAAGGAATTGAAAGTGT+TGG 0.490509 1_1:-28784298 None:intergenic
TCTGTGTTGGAGTTTGAAGC+AGG 0.494362 1_1:-28793602 None:intergenic
TTCACATCAACAGGTTGAGC+TGG 0.494499 1_1:+28789263 Msa0017390:intron
TCTTCTTGGTTCTGAATTTG+GGG 0.498421 1_1:-28784193 None:intergenic
ATCTGAGAGTTCAAGAATGA+AGG 0.500940 1_1:+28794050 Msa0017390:CDS
TTATTGGCATCCGAAGTCAT+TGG 0.502045 1_1:+28789351 Msa0017390:CDS
TAAAATGGAGACCCCGTAGA+AGG 0.504559 1_1:-28787142 None:intergenic
GGCTTCCATTCATTCCATGA+AGG 0.505970 1_1:-28786623 None:intergenic
GGCGGAGCTGTTACTGACAC+TGG 0.507273 1_1:+28786267 Msa0017390:CDS
GACTTCGGATGCCAATAACT+TGG 0.509815 1_1:-28789346 None:intergenic
GCAAGAGATCAAAGCACAAC+TGG 0.511320 1_1:+28788977 Msa0017390:CDS
ACATCTAACTTTATTGCTTG+CGG 0.514316 1_1:-28796560 None:intergenic
TGGTGGTTTGTTGTTCCATA+CGG 0.515033 1_1:-28786540 None:intergenic
TTGGATAGTGGCTCTTCACA+TGG 0.515846 1_1:+28786780 Msa0017390:CDS
AGCGTAGAAAAGTACTTTGG+TGG 0.517565 1_1:-28786557 None:intergenic
TGTTCGTTGCCTCAGTACAC+TGG 0.520756 1_1:+28796095 Msa0017390:three_prime_UTR
AACTAGCAAGCTTCTCTGAT+CGG 0.521333 1_1:+28795915 Msa0017390:exon
ACCAATAAATTCAACATCAA+CGG 0.524156 1_1:+28787063 Msa0017390:CDS
ACCATTGATGCTCTTCAAGA+AGG 0.525225 1_1:+28791540 Msa0017390:CDS
TGGATTCGTTGCAACGTGAA+TGG 0.527909 1_1:+28784388 Msa0017390:five_prime_UTR
TCTCGAAGCTGGAAAACGTC+GGG 0.531286 1_1:+28784512 Msa0017390:CDS
AGTAATCAAGGGTCTTTAGC+TGG 0.532144 1_1:+28786327 Msa0017390:intron
ATACCTAAATATGATTCCAT+TGG 0.536353 1_1:+28787010 Msa0017390:CDS
ATTATAGTTTCATTATACTT+GGG 0.538337 1_1:-28796458 None:intergenic
TAATACATCTACCACTAGTC+CGG 0.541808 1_1:+28786377 Msa0017390:CDS
CTCCTCTAAGCCAATGACTT+CGG 0.545944 1_1:-28789361 None:intergenic
ACCACATCTGATGGCATTGG+CGG 0.547565 1_1:+28786249 Msa0017390:CDS
CTCAGATGATTCAAATGCCA+AGG 0.548162 1_1:-28794034 None:intergenic
TAGTGGAAAGAGTGTTGGGA+TGG 0.550235 1_1:+28795854 Msa0017390:CDS
GACCCGTTACTCATGGATCT+GGG 0.556398 1_1:-28796048 None:intergenic
AGTCATTGGCTTAGAGGAGA+AGG 0.557070 1_1:+28789365 Msa0017390:CDS
ATTCCTCACTTCATAACCAA+TGG 0.557880 1_1:-28787026 None:intergenic
AACCTCTCGCAGCATGAGCA+AGG 0.558469 1_1:-28796528 None:intergenic
ATAGTAGTTGGATATGAAAG+AGG 0.558602 1_1:+28796291 Msa0017390:three_prime_UTR
CATTAATGCACTTATTTCTG+AGG 0.561666 1_1:+28793754 Msa0017390:CDS
ACCTGAAGACACTAAAACTG+TGG 0.561839 1_1:+28787249 Msa0017390:CDS
ATTCACACCGGTGGTGTTGG+TGG 0.562626 1_1:+28786513 Msa0017390:CDS
AGATAAACAAGGAGTTGTCC+CGG 0.563321 1_1:+28795386 Msa0017390:CDS
GTTAAAGCTTGAGAAGCAGC+TGG 0.563480 1_1:+28790616 Msa0017390:CDS
GAACATTCAGATATTGATGA+AGG 0.564471 1_1:+28786405 Msa0017390:CDS
GAACATTCCGTATGCAGATG+AGG 0.566725 1_1:+28795519 Msa0017390:CDS
ATCACTCTCATCTGATCATG+AGG 0.567360 1_1:-28793725 None:intergenic
ATCTACCACTAGTCCGGTGG+AGG 0.567627 1_1:+28786383 Msa0017390:CDS
TAATATACCAGTTATTTGAA+AGG 0.568653 1_1:+28796477 Msa0017390:three_prime_UTR
ATATCTGAATGTTCCTCCAC+CGG 0.568990 1_1:-28786396 None:intergenic
AATGTATAAAGCTATTGGGA+TGG 0.572003 1_1:+28795970 Msa0017390:three_prime_UTR
CGGAAATCCACCAACACCAC+CGG 0.572990 1_1:-28786520 None:intergenic
GTTACCACATCTGATGGCAT+TGG 0.573153 1_1:+28786246 Msa0017390:CDS
TTATGAAGCTATTTCCTGGT+GGG 0.573572 1_1:+28795878 Msa0017390:CDS
GGATCTGGGTTGAAATGCGC+TGG 0.574512 1_1:-28796034 None:intergenic
TCATCACCCTCATCTGCATA+CGG 0.574776 1_1:-28795526 None:intergenic
AATGTTGCTAGACCTTCTAC+GGG 0.575821 1_1:+28787130 Msa0017390:CDS
GGAATTCACACCGGTGGTGT+TGG 0.576102 1_1:+28786510 Msa0017390:CDS
AGGAAACAAACCTAAATCCT+CGG 0.580331 1_1:-28793052 None:intergenic
TGATCATGAGGAATATTCAC+AGG 0.581107 1_1:-28793713 None:intergenic
ATCTCGAAGCTGGAAAACGT+CGG 0.581971 1_1:+28784511 Msa0017390:CDS
TCGTTGCCTCAGTACACTGG+AGG 0.583111 1_1:+28796098 Msa0017390:three_prime_UTR
CAACCCAGATCCATGAGTAA+CGG 0.583336 1_1:+28796045 Msa0017390:three_prime_UTR
GATGGAGTTACCACATCTGA+TGG 0.584090 1_1:+28786240 Msa0017390:CDS
AAGTGCTAAGGAAAATGGCA+TGG 0.585974 1_1:+28787333 Msa0017390:CDS
AATAAAACAAGTAAAAGAGA+TGG 0.586995 1_1:+28793018 Msa0017390:CDS
CAATGGTTGACTGCAAATCA+CGG 0.587621 1_1:-28791524 None:intergenic
CAAGAGTAACAATTCTGTGA+AGG 0.588955 1_1:+28786653 Msa0017390:CDS
ATTCCATTGGTTATGAAGTG+AGG 0.589979 1_1:+28787023 Msa0017390:CDS
TCACATGGTTCGGTTTCTGG+AGG 0.590717 1_1:+28786795 Msa0017390:CDS
GGTGTTGGTGGATTTCCGTA+TGG 0.595213 1_1:+28786525 Msa0017390:CDS
ATGTTCCTCCACCGGACTAG+TGG 0.595690 1_1:-28786388 None:intergenic
GTTGCTGTCTAAGGTACGAA+AGG 0.597821 1_1:+28792972 Msa0017390:CDS
AACATTCCGTATGCAGATGA+GGG 0.604691 1_1:+28795520 Msa0017390:CDS
AAATGGCGTCGGCTCAGGTG+AGG 0.606141 1_1:+28784478 Msa0017390:exon
AACCTTGCTCATGCTGCGAG+AGG 0.608215 1_1:+28796526 Msa0017390:three_prime_UTR
CAAGAAGCTTTGTGGGAACG+GGG 0.608805 1_1:+28796318 Msa0017390:three_prime_UTR
ACATCAACAGGTTGAGCTGG+AGG 0.609822 1_1:+28789266 Msa0017390:intron
GCGGAGCTGTTACTGACACT+GGG 0.619830 1_1:+28786268 Msa0017390:CDS
ATAGTTGCACCATGAAGACT+AGG 0.621060 1_1:-28786989 None:intergenic
TACATCTACCACTAGTCCGG+TGG 0.624763 1_1:+28786380 Msa0017390:CDS
TCCGCCAATGCCATCAGATG+TGG 0.629114 1_1:-28786250 None:intergenic
CGTTGCCTCAGTACACTGGA+GGG 0.631781 1_1:+28796099 Msa0017390:three_prime_UTR
ATTATTGAAGGAGATAAACA+AGG 0.637691 1_1:+28795375 Msa0017390:intron
CCGACGCCATTTGAGAAAAG+GGG 0.638515 1_1:-28784467 None:intergenic
AGAATTCTGAACAGTGCCAG+AGG 0.639352 1_1:-28786157 None:intergenic
AAGGATTATGCAGTTACTGA+TGG 0.642365 1_1:+28786672 Msa0017390:CDS
GATATATATGGAATTCACAC+CGG 0.642496 1_1:+28786501 Msa0017390:CDS
CCTGAAGACACTAAAACTGT+GGG 0.644563 1_1:+28787250 Msa0017390:CDS
CACACCGATGATAAGTGCTA+AGG 0.647322 1_1:+28787321 Msa0017390:CDS
GTATGCAGATGAGGGTGATG+AGG 0.658889 1_1:+28795528 Msa0017390:CDS
CAAGCAGCAATGACACATCA+GGG 0.661156 1_1:+28787206 Msa0017390:CDS
ACGCCATTTGAGAAAAGGGG+AGG 0.669163 1_1:-28784464 None:intergenic
GGAGTTGTCCCGGAAACTTG+AGG 0.672278 1_1:+28795396 Msa0017390:CDS
ATATATGGAATTCACACCGG+TGG 0.680753 1_1:+28786504 Msa0017390:CDS
ATTATGAAGCTATTTCCTGG+TGG 0.680779 1_1:+28795877 Msa0017390:CDS
ATGGCAATAAATCTGTTCTG+CGG 0.681705 1_1:+28796235 Msa0017390:three_prime_UTR
AGATGGCTCTACATCTACCG+AGG 0.698883 1_1:+28793035 Msa0017390:CDS
TCACGCCCTCCAGTGTACTG+AGG 0.701339 1_1:-28796104 None:intergenic
TGGTTGACTGCAAATCACGG+CGG 0.815806 1_1:-28791521 None:intergenic
ATGTTGCTAGACCTTCTACG+GGG 0.831753 1_1:+28787131 Msa0017390:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAAATTGAAGAAATT+TGG - chr1_1:28784553-28784572 None:intergenic 10.0%
!! CCTAAAAAAAAAAAAAAAAA+CGG - chr1_1:28785603-28785622 None:intergenic 10.0%
!!! ATTTTTAATGTTTTTTTTAG+GGG - chr1_1:28789797-28789816 None:intergenic 10.0%
!!! ATTTTTAGTAGAAAAATTAT+TGG + chr1_1:28791259-28791278 Msa0017390:intron 10.0%
!!! ATATTTTGATTATTTACTTA+TGG - chr1_1:28792081-28792100 None:intergenic 10.0%
!! ATCTACAATTATTACAATTA+TGG + chr1_1:28784837-28784856 Msa0017390:intron 15.0%
!! TCTACAATTATTACAATTAT+GGG + chr1_1:28784838-28784857 Msa0017390:intron 15.0%
!!! ACAATATTTTGTACTAAATA+GGG + chr1_1:28784932-28784951 Msa0017390:intron 15.0%
!!! TTTTTTTTTTTTGTATGAAC+CGG + chr1_1:28785005-28785024 Msa0017390:intron 15.0%
!!! CCGTTTTTTTTTTTTTTTTT+AGG + chr1_1:28785600-28785619 Msa0017390:intron 15.0%
!!! ATTTTCCATTTTTTTTAGAA+CGG + chr1_1:28785949-28785968 Msa0017390:intron 15.0%
!! AATGAAACAAATGATATATA+TGG + chr1_1:28786489-28786508 Msa0017390:CDS 15.0%
!! AATTTATATCCACAATATAT+TGG - chr1_1:28787727-28787746 None:intergenic 15.0%
!! ATTTATTTAGTGCAATATTA+AGG + chr1_1:28787894-28787913 Msa0017390:intron 15.0%
!! TTTATTTAGTGCAATATTAA+GGG + chr1_1:28787895-28787914 Msa0017390:intron 15.0%
!! ATTGAAATAAAAACAATAAC+TGG - chr1_1:28788135-28788154 None:intergenic 15.0%
!! ATATGATAAGAATTAAAAAC+TGG - chr1_1:28788648-28788667 None:intergenic 15.0%
!! TATTGCTAATTAATAGATTT+AGG + chr1_1:28790509-28790528 Msa0017390:intron 15.0%
!!! ATTTTTCTTTATAGTATTTG+CGG - chr1_1:28790696-28790715 None:intergenic 15.0%
!! TTATTTCATTCTACTTAATA+TGG - chr1_1:28790997-28791016 None:intergenic 15.0%
!! AATAACCAAATACTATAATT+TGG - chr1_1:28794785-28794804 None:intergenic 15.0%
!!! TTGGTTATTTTTACTTTTAA+TGG + chr1_1:28794796-28794815 Msa0017390:intron 15.0%
!!! TGGTTATTTTTACTTTTAAT+GGG + chr1_1:28794797-28794816 Msa0017390:intron 15.0%
!! CATGATATAACAAATAATTA+TGG - chr1_1:28794951-28794970 None:intergenic 15.0%
!!! ATTTGTTTTCCTATTTAATT+AGG + chr1_1:28794971-28794990 Msa0017390:intron 15.0%
!! AGTATTTATTAGTATAAGAA+AGG + chr1_1:28795000-28795019 Msa0017390:intron 15.0%
!! CAAGTATATAAGAAAAAAAT+TGG + chr1_1:28795686-28795705 Msa0017390:intron 15.0%
!! ATTATAGTTTCATTATACTT+GGG - chr1_1:28796461-28796480 None:intergenic 15.0%
!! TATTATAGTTTCATTATACT+TGG - chr1_1:28796462-28796481 None:intergenic 15.0%
!! TTGAAAATTGAAACGTTAAA+AGG - chr1_1:28784316-28784335 None:intergenic 20.0%
!!! TTTTATTATTAGCTTCTTCA+AGG + chr1_1:28784565-28784584 Msa0017390:intron 20.0%
!!! TTTGTGTTTTTGTGTAATTT+TGG + chr1_1:28784637-28784656 Msa0017390:intron 20.0%
!!! TTGTGTTTTTGTGTAATTTT+GGG + chr1_1:28784638-28784657 Msa0017390:intron 20.0%
!!! CACAATATTTTGTACTAAAT+AGG + chr1_1:28784931-28784950 Msa0017390:intron 20.0%
!!! TACATCATTTTTCGTATTTT+TGG - chr1_1:28785251-28785270 None:intergenic 20.0%
!! TCCAATGTTAAAATATTGAA+GGG + chr1_1:28785326-28785345 Msa0017390:intron 20.0%
!!! TGAATTTTTGTTACTTTCTT+AGG + chr1_1:28785627-28785646 Msa0017390:intron 20.0%
!!! ATAAACCGTTCTAAAAAAAA+TGG - chr1_1:28785957-28785976 None:intergenic 20.0%
!! TCCCATCTTAAATAATTATT+TGG + chr1_1:28786073-28786092 Msa0017390:intron 20.0%
!!! CCCAAATAATTATTTAAGAT+GGG - chr1_1:28786077-28786096 None:intergenic 20.0%
!! CCCATCTTAAATAATTATTT+GGG + chr1_1:28786074-28786093 Msa0017390:intron 20.0%
!! ACCCAAATAATTATTTAAGA+TGG - chr1_1:28786078-28786097 None:intergenic 20.0%
!! CACATTCATTAAAAACAAAT+AGG - chr1_1:28787502-28787521 None:intergenic 20.0%
!!! ATATTGGTTTAAAATCGATA+AGG - chr1_1:28787711-28787730 None:intergenic 20.0%
!!! GATTTTAAACCAATATATTG+TGG + chr1_1:28787715-28787734 Msa0017390:intron 20.0%
!! TTATTTAGTGCAATATTAAG+GGG + chr1_1:28787896-28787915 Msa0017390:intron 20.0%
!!! TTGTTGTTTATAATAGTTAG+AGG - chr1_1:28788106-28788125 None:intergenic 20.0%
!!! TAAGAATTATAAACTTTTGC+AGG - chr1_1:28788254-28788273 None:intergenic 20.0%
!! TACGTGTTAAAAATGAAAAA+CGG + chr1_1:28788272-28788291 Msa0017390:intron 20.0%
!! AGTAACTTTCTCTTATATAT+TGG - chr1_1:28788759-28788778 None:intergenic 20.0%
!! AAGATGACAAAAAATGTTTA+CGG - chr1_1:28789438-28789457 None:intergenic 20.0%
!!! TGATTAAGATTTTCATTCAT+AGG + chr1_1:28789535-28789554 Msa0017390:intron 20.0%
!!! ATAAAGTTTAGTTTTGCTTT+TGG + chr1_1:28789630-28789649 Msa0017390:intron 20.0%
!!! CTAAATTTTTCGTTAAAGAA+GGG - chr1_1:28789670-28789689 None:intergenic 20.0%
!!! ACTAAATTTTTCGTTAAAGA+AGG - chr1_1:28789671-28789690 None:intergenic 20.0%
!! TCTTTAACGAAAAATTTAGT+AGG + chr1_1:28789671-28789690 Msa0017390:intron 20.0%
!! TGACAATATGTTTATAAGTA+GGG - chr1_1:28789931-28789950 None:intergenic 20.0%
!! AGTATTTATCTTTGTATTAG+AGG - chr1_1:28790035-28790054 None:intergenic 20.0%
!!! TATTTTTAATAGTGACTAGA+GGG - chr1_1:28790058-28790077 None:intergenic 20.0%
!!! TTATTTTTAATAGTGACTAG+AGG - chr1_1:28790059-28790078 None:intergenic 20.0%
!! TATTCAATGAATCTAAAAAG+TGG - chr1_1:28790086-28790105 None:intergenic 20.0%
!! CATTGAATAATTGATGTATT+TGG - chr1_1:28790134-28790153 None:intergenic 20.0%
!! TATTCAATGAATTCAAAAAG+TGG + chr1_1:28790145-28790164 Msa0017390:intron 20.0%
!! ATTCAATGAATTCAAAAAGT+GGG + chr1_1:28790146-28790165 Msa0017390:intron 20.0%
!!! TTTTTGCTTATAATAGTTAC+CGG + chr1_1:28790169-28790188 Msa0017390:intron 20.0%
!!! ATTTTTGTCCTTAAGTTTTT+GGG - chr1_1:28790328-28790347 None:intergenic 20.0%
!! CAAAACAATAAATCAAAAGT+TGG - chr1_1:28790556-28790575 None:intergenic 20.0%
!!! TTTTGTTCAATTAACTTCTT+AGG + chr1_1:28790571-28790590 Msa0017390:intron 20.0%
!! AAAGAAAAATGAAGATTTAG+TGG + chr1_1:28790706-28790725 Msa0017390:intron 20.0%
!! AAAGAATGAAAGAAATACTA+AGG - chr1_1:28791037-28791056 None:intergenic 20.0%
!! AAAATTATTGGAAACCTAAT+TGG + chr1_1:28791271-28791290 Msa0017390:intron 20.0%
!! AAATTATTGGAAACCTAATT+GGG + chr1_1:28791272-28791291 Msa0017390:intron 20.0%
!! GTCATATTAATTCCTAATTT+AGG + chr1_1:28791833-28791852 Msa0017390:intron 20.0%
!!! TTTTGATTATTTACTTATGG+AGG - chr1_1:28792078-28792097 None:intergenic 20.0%
!! AAACAAAACTAAACCAATAT+GGG - chr1_1:28792135-28792154 None:intergenic 20.0%
!! AAAACAAAACTAAACCAATA+TGG - chr1_1:28792136-28792155 None:intergenic 20.0%
!!! ATATTGGTTTAGTTTTGTTT+TGG + chr1_1:28792135-28792154 Msa0017390:intron 20.0%
!!! TGTTCTCTTTTGATATAATT+AGG + chr1_1:28792486-28792505 Msa0017390:intron 20.0%
!! TTTATGACGATACAAATATT+AGG + chr1_1:28792513-28792532 Msa0017390:intron 20.0%
!! TTATGACGATACAAATATTA+GGG + chr1_1:28792514-28792533 Msa0017390:intron 20.0%
!! TTAAGAAGCTATAAAAAAGT+TGG - chr1_1:28792566-28792585 None:intergenic 20.0%
!! AATAAAACAAGTAAAAGAGA+TGG + chr1_1:28793018-28793037 Msa0017390:CDS 20.0%
!! AAAAATCTGATATCAGATAT+TGG - chr1_1:28793406-28793425 None:intergenic 20.0%
!!! GAACACATTTTTTTTAAAGT+AGG + chr1_1:28794163-28794182 Msa0017390:intron 20.0%
!!! CATTTTTTTTAAAGTAGGAT+TGG + chr1_1:28794168-28794187 Msa0017390:intron 20.0%
!!! TCTTTTATTTTTACCAATTG+CGG + chr1_1:28794675-28794694 Msa0017390:intron 20.0%
!! TTTCCTATTTAATTAGGATT+TGG + chr1_1:28794977-28794996 Msa0017390:intron 20.0%
!! ATAAAGGATATGTGATTATA+TGG - chr1_1:28795145-28795164 None:intergenic 20.0%
!! TTGTAATCATTAAGAATACT+AGG + chr1_1:28795781-28795800 Msa0017390:intron 20.0%
!! TGTAATCATTAAGAATACTA+GGG + chr1_1:28795782-28795801 Msa0017390:intron 20.0%
!! TAGAAACTTGAATTAAAAGA+AGG + chr1_1:28795806-28795825 Msa0017390:intron 20.0%
!! CAAAATTCTTCAAAAGAAAT+GGG + chr1_1:28796155-28796174 Msa0017390:three_prime_UTR 20.0%
!!! TTCCATATATGCAATTATTT+TGG + chr1_1:28796209-28796228 Msa0017390:three_prime_UTR 20.0%
!! TTCCAAAATAATTGCATATA+TGG - chr1_1:28796214-28796233 None:intergenic 20.0%
!! TAATATACCAGTTATTTGAA+AGG + chr1_1:28796477-28796496 Msa0017390:three_prime_UTR 20.0%
!! TTAAAAGGAATTGAAAGTGT+TGG - chr1_1:28784301-28784320 None:intergenic 25.0%
! CTCTTCAAATTTCTTCAATT+TGG + chr1_1:28784368-28784387 Msa0017390:five_prime_UTR 25.0%
!! TTCTTCAAGGTTTAGAATTA+GGG + chr1_1:28784578-28784597 Msa0017390:intron 25.0%
!!! TTAGGGCATTGATTAATTAT+TGG + chr1_1:28784595-28784614 Msa0017390:intron 25.0%
!! TTGTTTAGCTGATTATGTTT+TGG + chr1_1:28784756-28784775 Msa0017390:intron 25.0%
! TTATTAATTGCGGAGAATAA+CGG + chr1_1:28784866-28784885 Msa0017390:intron 25.0%
! GTCCAATGTTAAAATATTGA+AGG + chr1_1:28785325-28785344 Msa0017390:intron 25.0%
!!! ACCCTTCAATATTTTAACAT+TGG - chr1_1:28785330-28785349 None:intergenic 25.0%
!!! AGATTCATTTTTGTGAAAAC+AGG - chr1_1:28785462-28785481 None:intergenic 25.0%
! TTACTTTCTTAGGTTATGTT+TGG + chr1_1:28785637-28785656 Msa0017390:intron 25.0%
!!! TTAGGTTATGTTTGGTTTTA+GGG + chr1_1:28785645-28785664 Msa0017390:intron 25.0%
! TACAAAATGTTGTCAAATAG+TGG - chr1_1:28785760-28785779 None:intergenic 25.0%
! GTATTAAATAGCAACAATAG+CGG + chr1_1:28785777-28785796 Msa0017390:intron 25.0%
!!! TTTTTTTCCAAAACTGAACA+GGG - chr1_1:28785923-28785942 None:intergenic 25.0%
!!! TTTTTTTTCCAAAACTGAAC+AGG - chr1_1:28785924-28785943 None:intergenic 25.0%
!! TTATTTAAGATGGGACAAAA+CGG - chr1_1:28786068-28786087 None:intergenic 25.0%
! TTTAACCAAAGTAGTAATCA+AGG + chr1_1:28786315-28786334 Msa0017390:intron 25.0%
! TTAACCAAAGTAGTAATCAA+GGG + chr1_1:28786316-28786335 Msa0017390:intron 25.0%
! ATACCTAAATATGATTCCAT+TGG + chr1_1:28787010-28787029 Msa0017390:CDS 25.0%
! TAACCAATGGAATCATATTT+AGG - chr1_1:28787016-28787035 None:intergenic 25.0%
! ATGTTGAATTTATTGGTGAA+TGG - chr1_1:28787060-28787079 None:intergenic 25.0%
! ACCAATAAATTCAACATCAA+CGG + chr1_1:28787063-28787082 Msa0017390:CDS 25.0%
! TTTAGAGAATCAAGAAAAGA+TGG - chr1_1:28787112-28787131 None:intergenic 25.0%
! TTCTAAATGACTAAACTTAG+AGG - chr1_1:28787185-28787204 None:intergenic 25.0%
!!! TCCAGTTTTTAGTAATAATC+AGG + chr1_1:28787297-28787316 Msa0017390:CDS 25.0%
! TCCTGATTATTACTAAAAAC+TGG - chr1_1:28787301-28787320 None:intergenic 25.0%
! TATTTAGTGCAATATTAAGG+GGG + chr1_1:28787897-28787916 Msa0017390:intron 25.0%
!!! AACTATTTTCTAGAAAAGAG+AGG - chr1_1:28788163-28788182 None:intergenic 25.0%
!!! TCTCTTTTCTAGAAAATAGT+TGG + chr1_1:28788162-28788181 Msa0017390:intron 25.0%
! AGTTAAATGAAAGAACTGTT+GGG - chr1_1:28788220-28788239 None:intergenic 25.0%
! AAGTTAAATGAAAGAACTGT+TGG - chr1_1:28788221-28788240 None:intergenic 25.0%
!! AATGAAAAACGGAATCTTTT+TGG + chr1_1:28788283-28788302 Msa0017390:intron 25.0%
!!! GTTGTTTCACAATTTTCAAT+GGG + chr1_1:28788308-28788327 Msa0017390:intron 25.0%
!! TTGTTTCACAATTTTCAATG+GGG + chr1_1:28788309-28788328 Msa0017390:intron 25.0%
! ATATGCTGCATAAGAAAAAA+TGG - chr1_1:28788454-28788473 None:intergenic 25.0%
! GACTGAAAATTATAATCATC+AGG + chr1_1:28788567-28788586 Msa0017390:intron 25.0%
! GAAAATTATAATCATCAGGT+TGG + chr1_1:28788571-28788590 Msa0017390:intron 25.0%
!! TACTTTGTTCTTTGTTACTT+TGG + chr1_1:28788791-28788810 Msa0017390:intron 25.0%
! CAATCAATTGAAATCAGAAA+TGG + chr1_1:28788944-28788963 Msa0017390:CDS 25.0%
! AAATGATTACGCAAATAGAT+AGG - chr1_1:28789018-28789037 None:intergenic 25.0%
!! ATCTATTTGCGTAATCATTT+TGG + chr1_1:28789018-28789037 Msa0017390:intron 25.0%
! GTGAAAATCTTAGATATATC+AGG - chr1_1:28789067-28789086 None:intergenic 25.0%
!!! ACAATGTTTTTGTTGGAAAA+AGG + chr1_1:28789158-28789177 Msa0017390:intron 25.0%
! ATGATAACTCATAGAATTTG+TGG + chr1_1:28789857-28789876 Msa0017390:intron 25.0%
! GACAATATGTTTATAAGTAG+GGG - chr1_1:28789930-28789949 None:intergenic 25.0%
! CTGACAATATGTTTATAAGT+AGG - chr1_1:28789932-28789951 None:intergenic 25.0%
! CTACTTATAAACATATTGTC+AGG + chr1_1:28789930-28789949 Msa0017390:intron 25.0%
! CTAATTCATATATACTACCT+GGG - chr1_1:28790007-28790026 None:intergenic 25.0%
! TCTAATTCATATATACTACC+TGG - chr1_1:28790008-28790027 None:intergenic 25.0%
!! CATTTTTGTCCTTAAGTTTT+TGG - chr1_1:28790329-28790348 None:intergenic 25.0%
!!! ATTCTTTTGCTTTTGATTGA+AGG + chr1_1:28791050-28791069 Msa0017390:intron 25.0%
!!! AAAGAACGAGTTTTATGTTT+AGG + chr1_1:28791164-28791183 Msa0017390:intron 25.0%
! TATAATCAGCTTAAAATGTG+CGG - chr1_1:28791464-28791483 None:intergenic 25.0%
! AGATAGAAAAATAGCATCTT+CGG + chr1_1:28791774-28791793 Msa0017390:intron 25.0%
! AAACAAGATAGAAGAAAGAT+TGG - chr1_1:28791805-28791824 None:intergenic 25.0%
! AAACTAAAGGATCCTAAATT+AGG - chr1_1:28791848-28791867 None:intergenic 25.0%
!!! TCTCTTATTGGTTTAAATCA+TGG + chr1_1:28791938-28791957 Msa0017390:intron 25.0%
!!! TTAGTTTTGTTTTGGACAAA+TGG + chr1_1:28792143-28792162 Msa0017390:intron 25.0%
! TTTAGATAGTCAAAGTTTAG+TGG - chr1_1:28792830-28792849 None:intergenic 25.0%
!!! CTTTTACTTGTTTTATTCTC+AGG - chr1_1:28793015-28793034 None:intergenic 25.0%
! ACAAAATAATAACCATACTG+AGG - chr1_1:28793075-28793094 None:intergenic 25.0%
!!! TGGTTATTATTTTGTCTGTT+AGG + chr1_1:28793080-28793099 Msa0017390:intron 25.0%
! TTCTTAAAAGTGAATAAGAG+AGG + chr1_1:28793179-28793198 Msa0017390:intron 25.0%
!!! TGAAGAGTTTTATTGTTATC+AGG + chr1_1:28793251-28793270 Msa0017390:intron 25.0%
! ACAGTATAAATTCAAATGCT+TGG - chr1_1:28793286-28793305 None:intergenic 25.0%
! AAACAAAATGAACCTAAACT+AGG - chr1_1:28793315-28793334 None:intergenic 25.0%
!! CGAGAAAATTTTATAAATGC+TGG - chr1_1:28793429-28793448 None:intergenic 25.0%
!!! ATTTTTTGCTGTAAATGTCT+CGG - chr1_1:28793454-28793473 None:intergenic 25.0%
! TTTAATCAGGTATTATTTGC+CGG - chr1_1:28793493-28793512 None:intergenic 25.0%
! CTAAAAATGTCCAAATGATT+GGG - chr1_1:28793521-28793540 None:intergenic 25.0%
!!! AATCATTTGGACATTTTTAG+CGG + chr1_1:28793521-28793540 Msa0017390:intron 25.0%
!!! TCTATTATTTAACTTGCTAG+TGG + chr1_1:28794128-28794147 Msa0017390:intron 25.0%
!!! TTTTAAAGTAGGATTGGATT+TGG + chr1_1:28794174-28794193 Msa0017390:intron 25.0%
!! TTTAAAGTAGGATTGGATTT+GGG + chr1_1:28794175-28794194 Msa0017390:intron 25.0%
! CGATACCAAATTATAGTATT+TGG + chr1_1:28794777-28794796 Msa0017390:intron 25.0%
! AAATCTTAAAGAGATAGTCT+AGG - chr1_1:28794924-28794943 None:intergenic 25.0%
! ACTCCAAATCCTAATTAAAT+AGG - chr1_1:28794983-28795002 None:intergenic 25.0%
! AACACTGATATACAATGATT+TGG - chr1_1:28795059-28795078 None:intergenic 25.0%
! ATTGTCGAGACTATAAATAA+AGG - chr1_1:28795161-28795180 None:intergenic 25.0%
! AGTTTATTGTGACCATTTAT+GGG - chr1_1:28795207-28795226 None:intergenic 25.0%
! AAGTTTATTGTGACCATTTA+TGG - chr1_1:28795208-28795227 None:intergenic 25.0%
! AATGGTCACAATAAACTTTA+TGG + chr1_1:28795210-28795229 Msa0017390:intron 25.0%
! ATAAGTTTATGTAAGAATCC+TGG + chr1_1:28795292-28795311 Msa0017390:intron 25.0%
! CAAGAATAAATCAAAATACC+AGG - chr1_1:28795313-28795332 None:intergenic 25.0%
! ATTATTGAAGGAGATAAACA+AGG + chr1_1:28795375-28795394 Msa0017390:intron 25.0%
! TTTCAGTTGCATAATATAAC+TGG - chr1_1:28795644-28795663 None:intergenic 25.0%
!!! TTGACATCTCTTTTTGTTTT+AGG + chr1_1:28795831-28795850 Msa0017390:intron 25.0%
! ACGAAAATGTATAAAGCTAT+TGG + chr1_1:28795965-28795984 Msa0017390:three_prime_UTR 25.0%
! CGAAAATGTATAAAGCTATT+GGG + chr1_1:28795966-28795985 Msa0017390:three_prime_UTR 25.0%
! GCAAAATTCTTCAAAAGAAA+TGG + chr1_1:28796154-28796173 Msa0017390:three_prime_UTR 25.0%
! TTTGAAAGCTGTTTATTGAT+TGG + chr1_1:28796183-28796202 Msa0017390:three_prime_UTR 25.0%
!!! TATGCAATTATTTTGGAAGA+TGG + chr1_1:28796216-28796235 Msa0017390:three_prime_UTR 25.0%
! AGTATTTCCTTTCAAATAAC+TGG - chr1_1:28796487-28796506 None:intergenic 25.0%
! CTTCTTCAAGGTTTAGAATT+AGG + chr1_1:28784577-28784596 Msa0017390:intron 30.0%
! TTTTGGTATGAGGAAATTGA+GGG + chr1_1:28784773-28784792 Msa0017390:intron 30.0%
! ATGGGTAGTGTTATTAATTG+CGG + chr1_1:28784856-28784875 Msa0017390:intron 30.0%
TCAAACAAAATGCTATCGTT+CGG - chr1_1:28784963-28784982 None:intergenic 30.0%
TGAGAACTGAGAACTAAAAA+TGG - chr1_1:28785287-28785306 None:intergenic 30.0%
AAAGTAGTCTATTCTGTTGT+TGG + chr1_1:28785533-28785552 Msa0017390:intron 30.0%
!!! CTTAGGTTATGTTTGGTTTT+AGG + chr1_1:28785644-28785663 Msa0017390:intron 30.0%
! CTGCTATTTAACAACATTGA+AGG + chr1_1:28785851-28785870 Msa0017390:intron 30.0%
!! GTATAGAATTTTAGTGTGTC+TGG + chr1_1:28785884-28785903 Msa0017390:intron 30.0%
GGTTAAACAAATTCACATTC+TGG - chr1_1:28786302-28786321 None:intergenic 30.0%
GAACATTCAGATATTGATGA+AGG + chr1_1:28786405-28786424 Msa0017390:CDS 30.0%
GATATATATGGAATTCACAC+CGG + chr1_1:28786501-28786520 Msa0017390:CDS 30.0%
ACAGAATTGTTACTCTTGTT+TGG - chr1_1:28786651-28786670 None:intergenic 30.0%
! ATGATTTTTGACGGAAAGTA+AGG - chr1_1:28786705-28786724 None:intergenic 30.0%
! TTCTCACGTATGATTTTTGA+CGG - chr1_1:28786714-28786733 None:intergenic 30.0%
! CTGTAGAAGCACAAAAATAA+AGG - chr1_1:28786832-28786851 None:intergenic 30.0%
CACAATATATGATGTACTAC+AGG + chr1_1:28786908-28786927 Msa0017390:intron 30.0%
CAAATCACTATCAGATCTAA+TGG - chr1_1:28786969-28786988 None:intergenic 30.0%
ATTTATTGGTGAATGGTTAG+AGG - chr1_1:28787053-28787072 None:intergenic 30.0%
TCCGTTGATGTTGAATTTAT+TGG - chr1_1:28787067-28787086 None:intergenic 30.0%
! TTTTCCTTAGCACTTATCAT+CGG - chr1_1:28787328-28787347 None:intergenic 30.0%
ATGATAAGTGCTAAGGAAAA+TGG + chr1_1:28787328-28787347 Msa0017390:CDS 30.0%
!!! AGACTTTTCAACTTTAGAAC+AGG + chr1_1:28787393-28787412 Msa0017390:CDS 30.0%
TTTGTAGATGTTCAAGCATT+TGG + chr1_1:28787546-28787565 Msa0017390:intron 30.0%
TTTGCAACCAATGAAAAGTT+AGG - chr1_1:28787629-28787648 None:intergenic 30.0%
!! AACTTTTCATTGGTTGCAAA+AGG + chr1_1:28787629-28787648 Msa0017390:intron 30.0%
TCATACTGCATAAATCATGT+TGG - chr1_1:28787685-28787704 None:intergenic 30.0%
GGTTATGTATACCAATATTC+TGG - chr1_1:28787780-28787799 None:intergenic 30.0%
ACATAACCTCATTATTAAGC+AGG + chr1_1:28787792-28787811 Msa0017390:intron 30.0%
CATAACCTCATTATTAAGCA+GGG + chr1_1:28787793-28787812 Msa0017390:intron 30.0%
! ATTTTCCCTGCTTAATAATG+AGG - chr1_1:28787801-28787820 None:intergenic 30.0%
!!! TACCTTGTTTTTTACACAAG+AGG - chr1_1:28787991-28788010 None:intergenic 30.0%
CTTGTGTAAAAAACAAGGTA+AGG + chr1_1:28787991-28788010 Msa0017390:intron 30.0%
!! TATAAACTTTTGCAGGTTGA+TGG - chr1_1:28788247-28788266 None:intergenic 30.0%
!! CGTTGTTTCACAATTTTCAA+TGG + chr1_1:28788307-28788326 Msa0017390:intron 30.0%
! TGTTTCACAATTTTCAATGG+GGG + chr1_1:28788310-28788329 Msa0017390:intron 30.0%
CACACACATATATTTGATAG+TGG - chr1_1:28788383-28788402 None:intergenic 30.0%
AGAAAAATCGTCAATACCAA+TGG - chr1_1:28788702-28788721 None:intergenic 30.0%
CTTTCTCTTATATATTGGAC+TGG - chr1_1:28788754-28788773 None:intergenic 30.0%
!! ACTGTTGACAATGTTTTTGT+TGG + chr1_1:28789151-28789170 Msa0017390:intron 30.0%
TAACTCATAGAATTTGTGGT+TGG + chr1_1:28789861-28789880 Msa0017390:intron 30.0%
AACTCATAGAATTTGTGGTT+GGG + chr1_1:28789862-28789881 Msa0017390:intron 30.0%
! AGGGAGTATATATCAATTGT+AGG + chr1_1:28790192-28790211 Msa0017390:intron 30.0%
AAAATTATATCTGCATTGCC+TGG + chr1_1:28790370-28790389 Msa0017390:intron 30.0%
! GGTGATGATTTTATTAAACC+AGG - chr1_1:28790391-28790410 None:intergenic 30.0%
AATCACATCACTCTATATCA+CGG - chr1_1:28790422-28790441 None:intergenic 30.0%
AAGCAGAAATTTCTTCATAC+AGG + chr1_1:28790648-28790667 Msa0017390:CDS 30.0%
GAGTACTTCAATTCAAGTAA+AGG - chr1_1:28791085-28791104 None:intergenic 30.0%
AAACCTTAGTAAAAGAAAGC+TGG - chr1_1:28791109-28791128 None:intergenic 30.0%
AAATTAGCAAGCATTACTGT+AGG - chr1_1:28791198-28791217 None:intergenic 30.0%
! TACAGTAATGCTTGCTAATT+TGG + chr1_1:28791197-28791216 Msa0017390:intron 30.0%
! TTTTAACCAGATTGTGTTGA+AGG - chr1_1:28791328-28791347 None:intergenic 30.0%
TTTAATTATCCCAGCAGTTT+GGG + chr1_1:28791578-28791597 Msa0017390:intron 30.0%
! GAGTTGTTGAAATTTTCTCT+TGG + chr1_1:28791634-28791653 Msa0017390:intron 30.0%
TTTGAAAGAAGCAAAACATC+AGG + chr1_1:28791716-28791735 Msa0017390:intron 30.0%
TCTAATACTCACTCTCTTAT+TGG + chr1_1:28791926-28791945 Msa0017390:intron 30.0%
!! CTTATTGGTTTAAATCATGG+TGG + chr1_1:28791941-28791960 Msa0017390:intron 30.0%
GACATACAATGAATTAAACC+AGG + chr1_1:28792002-28792021 Msa0017390:intron 30.0%
! ATTTAACGGTGCTTTTATGA+TGG + chr1_1:28792099-28792118 Msa0017390:intron 30.0%
ATGTCTGATATGATACATTC+AGG + chr1_1:28792299-28792318 Msa0017390:intron 30.0%
! GTACACATATCACTATTTTC+TGG + chr1_1:28792395-28792414 Msa0017390:intron 30.0%
CCAATTAAAAAAGAGCAAGA+AGG - chr1_1:28792445-28792464 None:intergenic 30.0%
!!! CCTTCTTGCTCTTTTTTAAT+TGG + chr1_1:28792442-28792461 Msa0017390:intron 30.0%
!!! TCTTGCTCTTTTTTAATTGG+TGG + chr1_1:28792445-28792464 Msa0017390:intron 30.0%
AAAAGTTGGAACTAGAGAAT+TGG - chr1_1:28792552-28792571 None:intergenic 30.0%
GCAATGACAAATAATGAACA+TGG - chr1_1:28792932-28792951 None:intergenic 30.0%
! AATTTTCCAGCATTCATAAC+CGG + chr1_1:28793471-28793490 Msa0017390:intron 30.0%
! TTAAAGTACTCCCAATCATT+TGG + chr1_1:28793508-28793527 Msa0017390:intron 30.0%
GCTAAAAATGTCCAAATGAT+TGG - chr1_1:28793522-28793541 None:intergenic 30.0%
!! ATTGTCATTGATTTCTGTGT+TGG - chr1_1:28793618-28793637 None:intergenic 30.0%
AAAGATGAATGTGTAGTTTC+AGG - chr1_1:28793683-28793702 None:intergenic 30.0%
! GAAACTACACATTCATCTTT+TGG + chr1_1:28793683-28793702 Msa0017390:CDS 30.0%
!! CATTAATGCACTTATTTCTG+AGG + chr1_1:28793754-28793773 Msa0017390:CDS 30.0%
TAGATGAGATAAAACAGGAT+GGG - chr1_1:28793922-28793941 None:intergenic 30.0%
TTAGATGAGATAAAACAGGA+TGG - chr1_1:28793923-28793942 None:intergenic 30.0%
CTACTTAGATGAGATAAAAC+AGG - chr1_1:28793927-28793946 None:intergenic 30.0%
AGCTACAGTAAAATGCTATA+CGG - chr1_1:28793985-28794004 None:intergenic 30.0%
AGAAGAATTGATGAAATCCT+TGG + chr1_1:28794017-28794036 Msa0017390:CDS 30.0%
! AGAAGTGTAAAACTATGACT+GGG - chr1_1:28794319-28794338 None:intergenic 30.0%
! TAGAAGTGTAAAACTATGAC+TGG - chr1_1:28794320-28794339 None:intergenic 30.0%
!!! GTTAGATTCTAGTTTTGTCT+TGG + chr1_1:28794414-28794433 Msa0017390:intron 30.0%
!!! TTCTAGTTTTGTCTTGGTTT+CGG + chr1_1:28794420-28794439 Msa0017390:intron 30.0%
! GTTTTATCTCAGCTATGTTT+TGG + chr1_1:28794516-28794535 Msa0017390:intron 30.0%
! CATGATTTTTCTTTCAGTTG+TGG + chr1_1:28794564-28794583 Msa0017390:intron 30.0%
! ATTTTTCTTTCAGTTGTGGT+TGG + chr1_1:28794568-28794587 Msa0017390:intron 30.0%
! TTTTTCTTTCAGTTGTGGTT+GGG + chr1_1:28794569-28794588 Msa0017390:intron 30.0%
! TATCTCAGTTAGTTTGAAAC+TGG + chr1_1:28794629-28794648 Msa0017390:intron 30.0%
GTGCTTTGTATTATACTCTA+TGG + chr1_1:28795116-28795135 Msa0017390:intron 30.0%
CTGTTTCGTTTCATTATTGA+AGG + chr1_1:28795363-28795382 Msa0017390:intron 30.0%
! AGTCAAAAGCTCTAATCTTT+GGG - chr1_1:28795428-28795447 None:intergenic 30.0%
! TAGTCAAAAGCTCTAATCTT+TGG - chr1_1:28795429-28795448 None:intergenic 30.0%
ACTACTCAAAACATGGTTAA+TGG + chr1_1:28795445-28795464 Msa0017390:CDS 30.0%
GAATTTACTGACAATAGATG+AGG - chr1_1:28795622-28795641 None:intergenic 30.0%
!! AAACATCGATTTCATTGTCA+AGG + chr1_1:28795710-28795729 Msa0017390:intron 30.0%
!! AACATCGATTTCATTGTCAA+GGG + chr1_1:28795711-28795730 Msa0017390:intron 30.0%
!!! TCTCTTTTTGTTTTAGGTAG+TGG + chr1_1:28795837-28795856 Msa0017390:intron 30.0%
AATGTATAAAGCTATTGGGA+TGG + chr1_1:28795970-28795989 Msa0017390:three_prime_UTR 30.0%
AACTACTATTGCACAAAACT+TGG - chr1_1:28796280-28796299 None:intergenic 30.0%
!! AAGTTTTGTGCAATAGTAGT+TGG + chr1_1:28796279-28796298 Msa0017390:three_prime_UTR 30.0%
ATAGTAGTTGGATATGAAAG+AGG + chr1_1:28796291-28796310 Msa0017390:three_prime_UTR 30.0%
! CAATTTTCTTTAATGAGACG+TGG + chr1_1:28796341-28796360 Msa0017390:three_prime_UTR 30.0%
ACATCTAACTTTATTGCTTG+CGG - chr1_1:28796563-28796582 None:intergenic 30.0%
!! TCTTCTTGGTTCTGAATTTG+GGG - chr1_1:28784196-28784215 None:intergenic 35.0%
!! CTCTTCTTGGTTCTGAATTT+GGG - chr1_1:28784197-28784216 None:intergenic 35.0%
!! TCTCTTCTTGGTTCTGAATT+TGG - chr1_1:28784198-28784217 None:intergenic 35.0%
! TTCAAATTGATTCTGCGATC+TGG + chr1_1:28784339-28784358 Msa0017390:five_prime_UTR 35.0%
! TCAAATTGATTCTGCGATCT+GGG + chr1_1:28784340-28784359 Msa0017390:five_prime_UTR 35.0%
TTGTGTATGCTACAGTAATG+TGG + chr1_1:28784684-28784703 Msa0017390:intron 35.0%
TGTGTATGCTACAGTAATGT+GGG + chr1_1:28784685-28784704 Msa0017390:intron 35.0%
!!! GCTGATTATGTTTTGGTATG+AGG + chr1_1:28784763-28784782 Msa0017390:intron 35.0%
!! GTTTTGGTATGAGGAAATTG+AGG + chr1_1:28784772-28784791 Msa0017390:intron 35.0%
TAGGAAGTGATGAAAAGAAG+AGG + chr1_1:28784799-28784818 Msa0017390:intron 35.0%
GATGCTGTTAAATCTCTTGA+TGG - chr1_1:28785088-28785107 None:intergenic 35.0%
AGAGATTTAACAGCATCTGA+AGG + chr1_1:28785091-28785110 Msa0017390:intron 35.0%
! TAGTCTAGACTTTTACTCTC+GGG - chr1_1:28785134-28785153 None:intergenic 35.0%
! CTAGTCTAGACTTTTACTCT+CGG - chr1_1:28785135-28785154 None:intergenic 35.0%
TAAAAGTCTAGACTAGAACC+TGG + chr1_1:28785139-28785158 Msa0017390:intron 35.0%
TTTGGATCAATAGAACTTCG+AGG + chr1_1:28785172-28785191 Msa0017390:intron 35.0%
ATTCAACTAACTACATGCCA+TGG + chr1_1:28785401-28785420 Msa0017390:intron 35.0%
GACTACTTTCTTCATTCCAT+AGG - chr1_1:28785522-28785541 None:intergenic 35.0%
TAGTCTATTCTGTTGTTGGA+AGG + chr1_1:28785537-28785556 Msa0017390:intron 35.0%
GCTATAGAACTATTGCATAG+CGG - chr1_1:28785727-28785746 None:intergenic 35.0%
! TTAGTGTGTCTGGATTTTGT+TGG + chr1_1:28785894-28785913 Msa0017390:intron 35.0%
! GTTCGAGTTAATGAGTTAGA+TGG + chr1_1:28786222-28786241 Msa0017390:CDS 35.0%
AAGACCCTTGATTACTACTT+TGG - chr1_1:28786323-28786342 None:intergenic 35.0%
TAATACATCTACCACTAGTC+CGG + chr1_1:28786377-28786396 Msa0017390:CDS 35.0%
! AATTGTTACTCTTGTTTGGC+TGG - chr1_1:28786647-28786666 None:intergenic 35.0%
CAAGAGTAACAATTCTGTGA+AGG + chr1_1:28786653-28786672 Msa0017390:CDS 35.0%
AAGGATTATGCAGTTACTGA+TGG + chr1_1:28786672-28786691 Msa0017390:CDS 35.0%
! TCCAAAGTGCTAGAATTTGT+CGG - chr1_1:28786765-28786784 None:intergenic 35.0%
AATTCTAGCACTTTGGATAG+TGG + chr1_1:28786768-28786787 Msa0017390:CDS 35.0%
!! TAAGTCATTGTCAGGTTGAA+TGG - chr1_1:28786865-28786884 None:intergenic 35.0%
! ATTCCATTGGTTATGAAGTG+AGG + chr1_1:28787023-28787042 Msa0017390:CDS 35.0%
ATTCCTCACTTCATAACCAA+TGG - chr1_1:28787029-28787048 None:intergenic 35.0%
AAATGTTGCTAGACCTTCTA+CGG + chr1_1:28787129-28787148 Msa0017390:CDS 35.0%
!! TCTTGCTCAGGTTGATAAAA+TGG - chr1_1:28787160-28787179 None:intergenic 35.0%
!!! CTTTTCAACTTTAGAACAGG+TGG + chr1_1:28787396-28787415 Msa0017390:intron 35.0%
! ATGCTGATTGTATGATGTTG+CGG + chr1_1:28787464-28787483 Msa0017390:intron 35.0%
TGTTCAAGCATTTGGTTGTT+AGG + chr1_1:28787554-28787573 Msa0017390:intron 35.0%
GTTCAAGCATTTGGTTGTTA+GGG + chr1_1:28787555-28787574 Msa0017390:intron 35.0%
TTCAAGCATTTGGTTGTTAG+GGG + chr1_1:28787556-28787575 Msa0017390:intron 35.0%
! AAACGCACCTAACTTTTCAT+TGG + chr1_1:28787619-28787638 Msa0017390:intron 35.0%
TTTCCATACGTCAACTATTC+AGG + chr1_1:28787832-28787851 Msa0017390:intron 35.0%
TTCCATACGTCAACTATTCA+GGG + chr1_1:28787833-28787852 Msa0017390:intron 35.0%
AGCCTCTTGTGTAAAAAACA+AGG + chr1_1:28787986-28788005 Msa0017390:intron 35.0%
AACTGTTGGGAAAACAACAT+AGG - chr1_1:28788207-28788226 None:intergenic 35.0%
! GTTTCACAATTTTCAATGGG+GGG + chr1_1:28788311-28788330 Msa0017390:intron 35.0%
! TATTTTCAACCACTTGCCAT+TGG + chr1_1:28788683-28788702 Msa0017390:intron 35.0%
! CTCTTATATATTGGACTGGA+GGG - chr1_1:28788750-28788769 None:intergenic 35.0%
! TCTCTTATATATTGGACTGG+AGG - chr1_1:28788751-28788770 None:intergenic 35.0%
GCGTTATTCGTACTCTAATT+TGG + chr1_1:28788813-28788832 Msa0017390:intron 35.0%
! TAGCTGCTTTGTGTTTGATT+TGG + chr1_1:28788843-28788862 Msa0017390:intron 35.0%
!! CTTTGTGTTTGATTTGGAGT+AGG + chr1_1:28788849-28788868 Msa0017390:intron 35.0%
TGATTACGCAAATAGATAGG+AGG - chr1_1:28789015-28789034 None:intergenic 35.0%
AACAAAGTAGAAAGCAACTG+CGG - chr1_1:28789203-28789222 None:intergenic 35.0%
ATCTCACAAGTCAGTTATGT+GGG - chr1_1:28789899-28789918 None:intergenic 35.0%
CATATATACTACCTGGGTTT+CGG - chr1_1:28790001-28790020 None:intergenic 35.0%
TTGCTTATAATAGTTACCGG+AGG + chr1_1:28790172-28790191 Msa0017390:intron 35.0%
TGCTTATAATAGTTACCGGA+GGG + chr1_1:28790173-28790192 Msa0017390:intron 35.0%
CAATTGATATATACTCCCTC+CGG - chr1_1:28790191-28790210 None:intergenic 35.0%
GTAGGATGTGCTTTCAAAAA+AGG + chr1_1:28790210-28790229 Msa0017390:intron 35.0%
! CTCTTTTAATGAGCATGTGT+AGG + chr1_1:28790481-28790500 Msa0017390:intron 35.0%
! ATTTAGTGGATATTCACCCA+TGG + chr1_1:28790720-28790739 Msa0017390:intron 35.0%
AAATGGTGGCACTTATTTGA+AGG + chr1_1:28790753-28790772 Msa0017390:intron 35.0%
AATGGTGGCACTTATTTGAA+GGG + chr1_1:28790754-28790773 Msa0017390:intron 35.0%
! AGACTTTTGTCTAATGTTGC+AGG + chr1_1:28790804-28790823 Msa0017390:intron 35.0%
AATGTTGCAGGTCAAGTTAT+AGG + chr1_1:28790816-28790835 Msa0017390:intron 35.0%
! TGAATGTGTTAAGAGAGTGT+TGG + chr1_1:28790862-28790881 Msa0017390:intron 35.0%
! TCACCAGCTTTCTTTTACTA+AGG + chr1_1:28791103-28791122 Msa0017390:intron 35.0%
ATTGGAAACCTAATTGGGTT+TGG + chr1_1:28791277-28791296 Msa0017390:intron 35.0%
AATTGTGACCAAACCCAATT+AGG - chr1_1:28791288-28791307 None:intergenic 35.0%
GTCACAATTACTTCTTGCAT+CGG + chr1_1:28791299-28791318 Msa0017390:intron 35.0%
CTTTAATTATCCCAGCAGTT+TGG + chr1_1:28791577-28791596 Msa0017390:intron 35.0%
GAAGCAAAACATCAGGATTA+AGG + chr1_1:28791723-28791742 Msa0017390:intron 35.0%
CAAAACATCAGGATTAAGGA+GGG + chr1_1:28791727-28791746 Msa0017390:intron 35.0%
TAAGCACGCTAACAAACTAA+AGG - chr1_1:28791861-28791880 None:intergenic 35.0%
AAGAGAGTGAGTATTAGAGA+GGG - chr1_1:28791924-28791943 None:intergenic 35.0%
TAAGAGAGTGAGTATTAGAG+AGG - chr1_1:28791925-28791944 None:intergenic 35.0%
AAAATTGAACCCACACAAAG+TGG + chr1_1:28791976-28791995 Msa0017390:intron 35.0%
ATGTCTGATATCAATGTGTC+TGG + chr1_1:28792256-28792275 Msa0017390:intron 35.0%
!! ACATATATCAGAAGCACCAA+TGG - chr1_1:28792332-28792351 None:intergenic 35.0%
! ATTGGTGCTTCTGATATATG+TGG + chr1_1:28792331-28792350 Msa0017390:intron 35.0%
CTGTTCTTAATCTGAAGATC+AGG - chr1_1:28792756-28792775 None:intergenic 35.0%
AAAGTTTAGTGGCCAACAAA+TGG - chr1_1:28792819-28792838 None:intergenic 35.0%
AAAGAAGATGTTGCTGTCTA+AGG + chr1_1:28792963-28792982 Msa0017390:CDS 35.0%
AGGAAACAAACCTAAATCCT+CGG - chr1_1:28793055-28793074 None:intergenic 35.0%
! TTAGGTTTGTTTCCTCAGTA+TGG + chr1_1:28793060-28793079 Msa0017390:intron 35.0%
TCTGTTAGGTGTTCTTTCAT+GGG + chr1_1:28793094-28793113 Msa0017390:intron 35.0%
GTATCTATTAGCAAGATGCT+TGG + chr1_1:28793227-28793246 Msa0017390:intron 35.0%
TACTGTAGTGTACCTAGTTT+AGG + chr1_1:28793300-28793319 Msa0017390:intron 35.0%
ACCTATGTACAAGACATTCT+GGG - chr1_1:28793377-28793396 None:intergenic 35.0%
TACCTATGTACAAGACATTC+TGG - chr1_1:28793378-28793397 None:intergenic 35.0%
!! TGATTGGGAGTACTTTAATC+AGG - chr1_1:28793506-28793525 None:intergenic 35.0%
ATGTGTAGTTTCAGGAACTA+TGG - chr1_1:28793675-28793694 None:intergenic 35.0%
TGATCATGAGGAATATTCAC+AGG - chr1_1:28793716-28793735 None:intergenic 35.0%
!! AATGCACTTATTTCTGAGGT+AGG + chr1_1:28793758-28793777 Msa0017390:intron 35.0%
TATATAAACAGAGACGAAGC+TGG + chr1_1:28793810-28793829 Msa0017390:intron 35.0%
TCACGTTTCTCATTACTGTT+TGG - chr1_1:28793857-28793876 None:intergenic 35.0%
AAACAGTAATGAGAAACGTG+AGG + chr1_1:28793856-28793875 Msa0017390:intron 35.0%
AAGTAATTGTCCAAGCAGTA+AGG - chr1_1:28793889-28793908 None:intergenic 35.0%
GCTACAGTAAAATGCTATAC+GGG - chr1_1:28793984-28794003 None:intergenic 35.0%
! GTATAGCATTTTACTGTAGC+TGG + chr1_1:28793984-28794003 Msa0017390:intron 35.0%
ATCTGAGAGTTCAAGAATGA+AGG + chr1_1:28794050-28794069 Msa0017390:CDS 35.0%
! CTTTTATCCGTCTTTCTGAT+CGG + chr1_1:28794252-28794271 Msa0017390:intron 35.0%
! TTTCTGATCGGATCTAAGAT+TGG + chr1_1:28794264-28794283 Msa0017390:intron 35.0%
! CTGGGATAAAACTAGTGTTT+TGG - chr1_1:28794301-28794320 None:intergenic 35.0%
!!! TATTTTCCGTAGCTGCTTTT+TGG + chr1_1:28794338-28794357 Msa0017390:intron 35.0%
AAGTAGCAACTGAGGAAAAA+AGG - chr1_1:28794453-28794472 None:intergenic 35.0%
!! TATTTTTACCAATTGCGGTC+TGG + chr1_1:28794680-28794699 Msa0017390:intron 35.0%
AACTTGTCTTAGATGTGATC+TGG + chr1_1:28794738-28794757 Msa0017390:intron 35.0%
TCCTATCTAATGCCCATAAA+TGG + chr1_1:28795192-28795211 Msa0017390:intron 35.0%
ACCATTTATGGGCATTAGAT+AGG - chr1_1:28795196-28795215 None:intergenic 35.0%
!! GCTTTTGACTACTCAAAACA+TGG + chr1_1:28795438-28795457 Msa0017390:CDS 35.0%
GACAGTTGTGCAATTTATGT+TGG + chr1_1:28795554-28795573 Msa0017390:intron 35.0%
! TGGATTATGAAGCTATTTCC+TGG + chr1_1:28795874-28795893 Msa0017390:CDS 35.0%
! ATTATGAAGCTATTTCCTGG+TGG + chr1_1:28795877-28795896 Msa0017390:CDS 35.0%
! TTATGAAGCTATTTCCTGGT+GGG + chr1_1:28795878-28795897 Msa0017390:CDS 35.0%
!! TTGCTAGTTCTTCGTTTTGA+CGG - chr1_1:28795904-28795923 None:intergenic 35.0%
ATGGCAATAAATCTGTTCTG+CGG + chr1_1:28796235-28796254 Msa0017390:three_prime_UTR 35.0%
! TTAATGAGACGTGGAACTTT+TGG + chr1_1:28796350-28796369 Msa0017390:three_prime_UTR 35.0%
!! TTTTGGTGACTGTATATGCA+AGG + chr1_1:28796367-28796386 Msa0017390:three_prime_UTR 35.0%
TGCAGATTTCTCTCTCTTCT+TGG - chr1_1:28784210-28784229 None:intergenic 40.0%
GCTATATCACTGTTGCAAAG+CGG - chr1_1:28784903-28784922 None:intergenic 40.0%
GCTTTGCAACAGTGATATAG+CGG + chr1_1:28784902-28784921 Msa0017390:intron 40.0%
GATTTAACAGCATCTGAAGG+TGG + chr1_1:28785094-28785113 Msa0017390:intron 40.0%
GAACCTGGAGAGTAACAATT+TGG + chr1_1:28785154-28785173 Msa0017390:intron 40.0%
GATCCAAATTGTTACTCTCC+AGG - chr1_1:28785160-28785179 None:intergenic 40.0%
TCAATAGAACTTCGAGGCTT+TGG + chr1_1:28785178-28785197 Msa0017390:intron 40.0%
ACTTATGTCCGAAGCTAGTA+AGG - chr1_1:28785209-28785228 None:intergenic 40.0%
TTGTTGTCACACAAGAACCA+TGG - chr1_1:28785421-28785440 None:intergenic 40.0%
! ATCTTTCAAGTCTGAGCCTA+TGG + chr1_1:28785503-28785522 Msa0017390:intron 40.0%
TTCTGTTGTTGGAAGGAACT+AGG + chr1_1:28785544-28785563 Msa0017390:intron 40.0%
AACTAGCAACAATATGGCCT+AGG - chr1_1:28785570-28785589 None:intergenic 40.0%
TCGTGCAACTAGCAACAATA+TGG - chr1_1:28785576-28785595 None:intergenic 40.0%
ATATTGTTGCTAGTTGCACG+AGG + chr1_1:28785575-28785594 Msa0017390:intron 40.0%
TCGTGGTTAGCAGAAAATAG+CGG + chr1_1:28785689-28785708 Msa0017390:intron 40.0%
TTGTCAAATAGTGGCTAGAG+TGG - chr1_1:28785751-28785770 None:intergenic 40.0%
AATTATTTGGGTCTTGCAGC+TGG + chr1_1:28786086-28786105 Msa0017390:intron 40.0%
GTAAAAAGAAAGCCGAAGAG+CGG + chr1_1:28786118-28786137 Msa0017390:CDS 40.0%
TAAAAAGAAAGCCGAAGAGC+GGG + chr1_1:28786119-28786138 Msa0017390:CDS 40.0%
! CGAACATTTTCAACTTGCAC+AGG - chr1_1:28786207-28786226 None:intergenic 40.0%
AGTAATCAAGGGTCTTTAGC+TGG + chr1_1:28786327-28786346 Msa0017390:intron 40.0%
ATATCTGAATGTTCCTCCAC+CGG - chr1_1:28786399-28786418 None:intergenic 40.0%
ATATATGGAATTCACACCGG+TGG + chr1_1:28786504-28786523 Msa0017390:CDS 40.0%
!! TGGTGGTTTGTTGTTCCATA+CGG - chr1_1:28786543-28786562 None:intergenic 40.0%
!! AGCGTAGAAAAGTACTTTGG+TGG - chr1_1:28786560-28786579 None:intergenic 40.0%
!! GAGAGCGTAGAAAAGTACTT+TGG - chr1_1:28786563-28786582 None:intergenic 40.0%
! AGTACTTTTCTACGCTCTCA+AGG + chr1_1:28786564-28786583 Msa0017390:intron 40.0%
!! GAAAGCACTAAGTCATTGTC+AGG - chr1_1:28786873-28786892 None:intergenic 40.0%
! AGTGATTTGCCTAGTCTTCA+TGG + chr1_1:28786980-28786999 Msa0017390:CDS 40.0%
ATAGTTGCACCATGAAGACT+AGG - chr1_1:28786992-28787011 None:intergenic 40.0%
AATGTTGCTAGACCTTCTAC+GGG + chr1_1:28787130-28787149 Msa0017390:CDS 40.0%
!! ACAGTTTTAGTGTCTTCAGG+TGG - chr1_1:28787250-28787269 None:intergenic 40.0%
ACCTGAAGACACTAAAACTG+TGG + chr1_1:28787249-28787268 Msa0017390:CDS 40.0%
CCTGAAGACACTAAAACTGT+GGG + chr1_1:28787250-28787269 Msa0017390:CDS 40.0%
AAGTGCTAAGGAAAATGGCA+TGG + chr1_1:28787333-28787352 Msa0017390:CDS 40.0%
GTTTCCACTAGTTATGGTCA+AGG + chr1_1:28787418-28787437 Msa0017390:intron 40.0%
AATGCCTTGACCATAACTAG+TGG - chr1_1:28787425-28787444 None:intergenic 40.0%
CATATTCGTTTGCCAGTTTG+AGG + chr1_1:28787753-28787772 Msa0017390:intron 40.0%
CAATATTCTGGTCCTCAAAC+TGG - chr1_1:28787768-28787787 None:intergenic 40.0%
CAGTTTGAGGACCAGAATAT+TGG + chr1_1:28787766-28787785 Msa0017390:intron 40.0%
TCCATACGTCAACTATTCAG+GGG + chr1_1:28787834-28787853 Msa0017390:intron 40.0%
ACTATTCAGGGGAATCTCTA+TGG + chr1_1:28787845-28787864 Msa0017390:intron 40.0%
!! TTACACAAGAGGCTGTTTCT+AGG - chr1_1:28787980-28787999 None:intergenic 40.0%
GAGTAGGATAGTTGTCTGTA+AGG + chr1_1:28788865-28788884 Msa0017390:intron 40.0%
TGTCTGTAAGGATACAAGCT+TGG + chr1_1:28788877-28788896 Msa0017390:intron 40.0%
!!! ATTTTGGTTTCTGCGCAGTA+TGG + chr1_1:28789034-28789053 Msa0017390:intron 40.0%
TTGTCAACAGTCAATGCTGT+AGG - chr1_1:28789142-28789161 None:intergenic 40.0%
ATCTGACTCTTCACATCAAC+AGG + chr1_1:28789254-28789273 Msa0017390:intron 40.0%
TTATTGGCATCCGAAGTCAT+TGG + chr1_1:28789351-28789370 Msa0017390:CDS 40.0%
! GAGAAGGTAGGGATTTTTCT+TGG + chr1_1:28789381-28789400 Msa0017390:intron 40.0%
TCTCACAAGTCAGTTATGTG+GGG - chr1_1:28789898-28789917 None:intergenic 40.0%
CATCTCACAAGTCAGTTATG+TGG - chr1_1:28789900-28789919 None:intergenic 40.0%
!! CATAACTGACTTGTGAGATG+AGG + chr1_1:28789900-28789919 Msa0017390:intron 40.0%
! AGGCCATCTCTTATTTGATG+TGG + chr1_1:28789950-28789969 Msa0017390:intron 40.0%
! GGCCATCTCTTATTTGATGT+GGG + chr1_1:28789951-28789970 Msa0017390:intron 40.0%
GTCCCACATCAAATAAGAGA+TGG - chr1_1:28789956-28789975 None:intergenic 40.0%
ATATGCAATGAGCTCCAACT+TGG + chr1_1:28790258-28790277 Msa0017390:intron 40.0%
GAGATGTGATTCATCCAAGT+TGG - chr1_1:28790275-28790294 None:intergenic 40.0%
!! TAAGTTTTTGGGCTGAAGCA+TGG - chr1_1:28790317-28790336 None:intergenic 40.0%
TGCTTCAGCCCAAAAACTTA+AGG + chr1_1:28790317-28790336 Msa0017390:intron 40.0%
ACATCACTCTATATCACGGA+TGG - chr1_1:28790418-28790437 None:intergenic 40.0%
CAAATAAGTGCCACCATTTC+TGG - chr1_1:28790752-28790771 None:intergenic 40.0%
! GTTGGACGAACATTTTCGTA+TGG + chr1_1:28790880-28790899 Msa0017390:intron 40.0%
TCTCTTCATTTCCTTCCATC+TGG + chr1_1:28791405-28791424 Msa0017390:intron 40.0%
!! TATGAGAAGTACCAGATGGA+AGG - chr1_1:28791419-28791438 None:intergenic 40.0%
!! CAGTTATGAGAAGTACCAGA+TGG - chr1_1:28791423-28791442 None:intergenic 40.0%
CAATGGTTGACTGCAAATCA+CGG - chr1_1:28791527-28791546 None:intergenic 40.0%
ACCATTGATGCTCTTCAAGA+AGG + chr1_1:28791540-28791559 Msa0017390:CDS 40.0%
!! ACCTTCTTGAAGAGCATCAA+TGG - chr1_1:28791544-28791563 None:intergenic 40.0%
CTATGAAAACCCAAACTGCT+GGG - chr1_1:28791590-28791609 None:intergenic 40.0%
TCTATGAAAACCCAAACTGC+TGG - chr1_1:28791591-28791610 None:intergenic 40.0%
TTTCTCTTGGCATTCCAATG+TGG + chr1_1:28791647-28791666 Msa0017390:intron 40.0%
! ATTCCAATGTGGACTGATGA+TGG + chr1_1:28791658-28791677 Msa0017390:intron 40.0%
!! AATGTGGACTGATGATGGTA+GGG + chr1_1:28791663-28791682 Msa0017390:intron 40.0%
GCAAAACATCAGGATTAAGG+AGG + chr1_1:28791726-28791745 Msa0017390:intron 40.0%
! TAACGGTGCTTTTATGATGG+CGG + chr1_1:28792102-28792121 Msa0017390:intron 40.0%
TGAGTCAGCTACAGTTATGT+GGG - chr1_1:28792665-28792684 None:intergenic 40.0%
ATGAGTCAGCTACAGTTATG+TGG - chr1_1:28792666-28792685 None:intergenic 40.0%
ACTCATAGTATCAGCAGTGT+AGG + chr1_1:28792680-28792699 Msa0017390:intron 40.0%
CTCATAGTATCAGCAGTGTA+GGG + chr1_1:28792681-28792700 Msa0017390:intron 40.0%
GGTAAACCTCACAATAGTGT+AGG + chr1_1:28792702-28792721 Msa0017390:intron 40.0%
GCTTAACCTACACTATTGTG+AGG - chr1_1:28792711-28792730 None:intergenic 40.0%
AATGCTAGCTAGCCATTTGT+TGG + chr1_1:28792804-28792823 Msa0017390:intron 40.0%
TCTACATCTACCGAGGATTT+AGG + chr1_1:28793042-28793061 Msa0017390:CDS 40.0%
GTCTGTTAGGTGTTCTTTCA+TGG + chr1_1:28793093-28793112 Msa0017390:intron 40.0%
TTGAGTGACTTTAGCATGCA+AGG - chr1_1:28793137-28793156 None:intergenic 40.0%
AAGTCACTCAAGCATGATTC+TGG + chr1_1:28793146-28793165 Msa0017390:intron 40.0%
AGTCACTCAAGCATGATTCT+GGG + chr1_1:28793147-28793166 Msa0017390:intron 40.0%
ACCCAGAATGTCTTGTACAT+AGG + chr1_1:28793373-28793392 Msa0017390:intron 40.0%
! TATTTGCCGGTTATGAATGC+TGG - chr1_1:28793480-28793499 None:intergenic 40.0%
ATCACTCTCATCTGATCATG+AGG - chr1_1:28793728-28793747 None:intergenic 40.0%
!! CTTATTTCTGAGGTAGGAGT+TGG + chr1_1:28793764-28793783 Msa0017390:intron 40.0%
! CATTTTACTGTAGCTGGCAT+TGG + chr1_1:28793990-28794009 Msa0017390:intron 40.0%
CTCAGATGATTCAAATGCCA+AGG - chr1_1:28794037-28794056 None:intergenic 40.0%
!! TTAACTTGCTAGTGGAGTTG+TGG + chr1_1:28794136-28794155 Msa0017390:intron 40.0%
GATAAAAGCAGGAGATAACG+TGG - chr1_1:28794240-28794259 None:intergenic 40.0%
TCAGAAAGACGGATAAAAGC+AGG - chr1_1:28794251-28794270 None:intergenic 40.0%
CTTAGATCCGATCAGAAAGA+CGG - chr1_1:28794262-28794281 None:intergenic 40.0%
TTAGTGCCAAAAAGCAGCTA+CGG - chr1_1:28794347-28794366 None:intergenic 40.0%
! GTTTTGTCTTGGTTTCGGTT+TGG + chr1_1:28794425-28794444 Msa0017390:intron 40.0%
! TCTCAATTGTGCTTTTGCTC+AGG + chr1_1:28794494-28794513 Msa0017390:intron 40.0%
!! ATCTCAGCTATGTTTTGGAC+TGG + chr1_1:28794521-28794540 Msa0017390:intron 40.0%
GTTTCTTCTCAGTTACCCTT+TGG + chr1_1:28794597-28794616 Msa0017390:intron 40.0%
GAGATAAATCCAGTGCCAAA+GGG - chr1_1:28794615-28794634 None:intergenic 40.0%
TGAGATAAATCCAGTGCCAA+AGG - chr1_1:28794616-28794635 None:intergenic 40.0%
! TTTGCCACAGCTGCAATTTT+TGG + chr1_1:28794711-28794730 Msa0017390:intron 40.0%
!! ATTTGGTATCGATGCTTGAC+TGG - chr1_1:28794768-28794787 None:intergenic 40.0%
ACTTTATGGCCAATGATGTG+TGG + chr1_1:28795224-28795243 Msa0017390:intron 40.0%
CAAACTCAACCACACATCAT+TGG - chr1_1:28795236-28795255 None:intergenic 40.0%
ACAGCAGAAATTGTGTGGTT+AGG - chr1_1:28795347-28795366 None:intergenic 40.0%
ACGAAACAGCAGAAATTGTG+TGG - chr1_1:28795352-28795371 None:intergenic 40.0%
AGATAAACAAGGAGTTGTCC+CGG + chr1_1:28795386-28795405 Msa0017390:CDS 40.0%
! AAAGCTCTAATCTTTGGGTC+TGG - chr1_1:28795423-28795442 None:intergenic 40.0%
TCATACGTAACACGAGAATC+TGG - chr1_1:28795499-28795518 None:intergenic 40.0%
AACATTCCGTATGCAGATGA+GGG + chr1_1:28795520-28795539 Msa0017390:CDS 40.0%
TATGCAACTGAAACGTTCAC+TGG + chr1_1:28795651-28795670 Msa0017390:intron 40.0%
! ATCGATTTCATTGTCAAGGG+TGG + chr1_1:28795714-28795733 Msa0017390:intron 40.0%
TTGTCAAGGGTGGAAATAGT+TGG + chr1_1:28795724-28795743 Msa0017390:intron 40.0%
! TGGAAATAGTTGGTCTATGC+AGG + chr1_1:28795734-28795753 Msa0017390:intron 40.0%
!! TTAGGTAGTGGAAAGAGTGT+TGG + chr1_1:28795849-28795868 Msa0017390:intron 40.0%
!! TAGGTAGTGGAAAGAGTGTT+GGG + chr1_1:28795850-28795869 Msa0017390:intron 40.0%
AACTAGCAAGCTTCTCTGAT+CGG + chr1_1:28795915-28795934 Msa0017390:exon 40.0%
TCTCTCTCTCTCGATCAGAT+CGG + chr1_1:28784258-28784277 Msa0017390:five_prime_UTR 45.0%
TGGATTCGTTGCAACGTGAA+TGG + chr1_1:28784388-28784407 Msa0017390:five_prime_UTR 45.0%
! GATCCTCCCCTTTTCTCAAA+TGG + chr1_1:28784461-28784480 Msa0017390:exon 45.0%
ATCTCGAAGCTGGAAAACGT+CGG + chr1_1:28784511-28784530 Msa0017390:CDS 45.0%
TGGTATGAGGAAATTGAGGG+AGG + chr1_1:28784776-28784795 Msa0017390:intron 45.0%
ATGAGGAAATTGAGGGAGGT+AGG + chr1_1:28784780-28784799 Msa0017390:intron 45.0%
TTAACAGCATCTGAAGGTGG+AGG + chr1_1:28785097-28785116 Msa0017390:intron 45.0%
! ATAGAACTTCGAGGCTTTGG+AGG + chr1_1:28785181-28785200 Msa0017390:intron 45.0%
!! TAGAACTTCGAGGCTTTGGA+GGG + chr1_1:28785182-28785201 Msa0017390:intron 45.0%
GAAACCAGTGTTGTCAATCG+TGG + chr1_1:28785672-28785691 Msa0017390:intron 45.0%
CTAACCACGATTGACAACAC+TGG - chr1_1:28785679-28785698 None:intergenic 45.0%
CGGTTTGTCAAAATTCCGCT+AGG + chr1_1:28785797-28785816 Msa0017390:intron 45.0%
ATACTAGCGCTATAGCCTAG+CGG - chr1_1:28785815-28785834 None:intergenic 45.0%
! TTGGCTTCCCTGTTCAGTTT+TGG + chr1_1:28785913-28785932 Msa0017390:intron 45.0%
AGAATTCTGAACAGTGCCAG+AGG - chr1_1:28786160-28786179 None:intergenic 45.0%
!!! AGGCTGTTTCTGATTTTGGC+TGG - chr1_1:28786187-28786206 None:intergenic 45.0%
!!! GCACAGGCTGTTTCTGATTT+TGG - chr1_1:28786191-28786210 None:intergenic 45.0%
GATGGAGTTACCACATCTGA+TGG + chr1_1:28786240-28786259 Msa0017390:CDS 45.0%
GTTACCACATCTGATGGCAT+TGG + chr1_1:28786246-28786265 Msa0017390:CDS 45.0%
TCCAGCCTTCATGGAATGAA+TGG + chr1_1:28786618-28786637 Msa0017390:CDS 45.0%
TCCATTCATTCCATGAAGGC+TGG - chr1_1:28786622-28786641 None:intergenic 45.0%
GGCTTCCATTCATTCCATGA+AGG - chr1_1:28786626-28786645 None:intergenic 45.0%
GCCGACAAATTCTAGCACTT+TGG + chr1_1:28786761-28786780 Msa0017390:CDS 45.0%
! TTGGATAGTGGCTCTTCACA+TGG + chr1_1:28786780-28786799 Msa0017390:CDS 45.0%
TAGTGGCTCTTCACATGGTT+CGG + chr1_1:28786785-28786804 Msa0017390:CDS 45.0%
!! TCTTCACATGGTTCGGTTTC+TGG + chr1_1:28786792-28786811 Msa0017390:CDS 45.0%
ATGTTGCTAGACCTTCTACG+GGG + chr1_1:28787131-28787150 Msa0017390:CDS 45.0%
TAAAATGGAGACCCCGTAGA+AGG - chr1_1:28787145-28787164 None:intergenic 45.0%
TCAAGCAGCAATGACACATC+AGG + chr1_1:28787205-28787224 Msa0017390:CDS 45.0%
CAAGCAGCAATGACACATCA+GGG + chr1_1:28787206-28787225 Msa0017390:CDS 45.0%
TAGTGTCTTCAGGTGGCTTA+TGG - chr1_1:28787243-28787262 None:intergenic 45.0%
!! CCCACAGTTTTAGTGTCTTC+AGG - chr1_1:28787253-28787272 None:intergenic 45.0%
CACACCGATGATAAGTGCTA+AGG + chr1_1:28787321-28787340 Msa0017390:CDS 45.0%
CAGGTGGTTTCCACTAGTTA+TGG + chr1_1:28787412-28787431 Msa0017390:intron 45.0%
TCCCCTGAATAGTTGACGTA+TGG - chr1_1:28787838-28787857 None:intergenic 45.0%
ACAACTTTACCGTTGCACCA+AGG - chr1_1:28787925-28787944 None:intergenic 45.0%
GCACGATACACCAAAATGGT+GGG + chr1_1:28788018-28788037 Msa0017390:intron 45.0%
!! AAAATGGTGGGACCTTTTCC+CGG + chr1_1:28788030-28788049 Msa0017390:intron 45.0%
TCGTCAATACCAATGGCAAG+TGG - chr1_1:28788695-28788714 None:intergenic 45.0%
GCAAGAGATCAAAGCACAAC+TGG + chr1_1:28788977-28788996 Msa0017390:CDS 45.0%
CAGATATCTACCGAAGACAG+AGG - chr1_1:28789239-28789258 None:intergenic 45.0%
! TTCACATCAACAGGTTGAGC+TGG + chr1_1:28789263-28789282 Msa0017390:intron 45.0%
TGATGAGCGTGCCAAGTTAT+TGG + chr1_1:28789335-28789354 Msa0017390:CDS 45.0%
GACTTCGGATGCCAATAACT+TGG - chr1_1:28789349-28789368 None:intergenic 45.0%
!! ATCCGAAGTCATTGGCTTAG+AGG + chr1_1:28789359-28789378 Msa0017390:CDS 45.0%
CTCCTCTAAGCCAATGACTT+CGG - chr1_1:28789364-28789383 None:intergenic 45.0%
!! AGTCATTGGCTTAGAGGAGA+AGG + chr1_1:28789365-28789384 Msa0017390:CDS 45.0%
! ATTGGCTTAGAGGAGAAGGT+AGG + chr1_1:28789369-28789388 Msa0017390:intron 45.0%
TTGGCTTAGAGGAGAAGGTA+GGG + chr1_1:28789370-28789389 Msa0017390:intron 45.0%
CAGTTATGTGGGGTTGTGTT+AGG - chr1_1:28789888-28789907 None:intergenic 45.0%
! AGCATGGACATTGCATTGGT+CGG - chr1_1:28790301-28790320 None:intergenic 45.0%
CTGAAGCATGGACATTGCAT+TGG - chr1_1:28790305-28790324 None:intergenic 45.0%
CTCTATATCACGGATGGAAG+TGG - chr1_1:28790412-28790431 None:intergenic 45.0%
GTGACACTTGTGTCTGTGTT+TGG - chr1_1:28790462-28790481 None:intergenic 45.0%
GTTAAAGCTTGAGAAGCAGC+TGG + chr1_1:28790616-28790635 Msa0017390:CDS 45.0%
!! CCATTTCTGGCAGAAACCAT+GGG - chr1_1:28790739-28790758 None:intergenic 45.0%
!! ACCATTTCTGGCAGAAACCA+TGG - chr1_1:28790740-28790759 None:intergenic 45.0%
ATGGTTTCTGCCAGAAATGG+TGG + chr1_1:28790739-28790758 Msa0017390:intron 45.0%
ACCGAGTGCATATCAGAGTT+AGG + chr1_1:28790963-28790982 Msa0017390:intron 45.0%
CCCTAACTCTGATATGCACT+CGG - chr1_1:28790967-28790986 None:intergenic 45.0%
CCGAGTGCATATCAGAGTTA+GGG + chr1_1:28790964-28790983 Msa0017390:intron 45.0%
!! AATCACGGCGGTCTTTTTCA+AGG - chr1_1:28791512-28791531 None:intergenic 45.0%
CTACCATCATCAGTCCACAT+TGG - chr1_1:28791664-28791683 None:intergenic 45.0%
!! CAATGTGGACTGATGATGGT+AGG + chr1_1:28791662-28791681 Msa0017390:intron 45.0%
!! GGAGGGTTGTTAACTTGCAA+TGG + chr1_1:28791744-28791763 Msa0017390:intron 45.0%
ATTGAACCCACACAAAGTGG+TGG + chr1_1:28791979-28791998 Msa0017390:intron 45.0%
TTGAACCCACACAAAGTGGT+GGG + chr1_1:28791980-28791999 Msa0017390:intron 45.0%
TATGTCCCACCACTTTGTGT+GGG - chr1_1:28791988-28792007 None:intergenic 45.0%
GTTCTGCGACACATTGTTGT+AGG + chr1_1:28792172-28792191 Msa0017390:intron 45.0%
ACATTCAGGACCTACACCAT+TGG + chr1_1:28792313-28792332 Msa0017390:intron 45.0%
!! ATCAGAAGCACCAATGGTGT+AGG - chr1_1:28792326-28792345 None:intergenic 45.0%
GTGCAAGCTCTCAGTTAGTT+AGG + chr1_1:28792601-28792620 Msa0017390:intron 45.0%
TAGGCTGTGCTTTGCAATTG+CGG + chr1_1:28792620-28792639 Msa0017390:intron 45.0%
! GTTGCTGTCTAAGGTACGAA+AGG + chr1_1:28792972-28792991 Msa0017390:CDS 45.0%
! TCTAAGGTACGAAAGGCTTC+AGG + chr1_1:28792979-28792998 Msa0017390:CDS 45.0%
GTACGAAAGGCTTCAGGATT+CGG + chr1_1:28792985-28793004 Msa0017390:CDS 45.0%
GTCACTCAAGCATGATTCTG+GGG + chr1_1:28793148-28793167 Msa0017390:intron 45.0%
TGTACAAGACATTCTGGGTC+TGG - chr1_1:28793372-28793391 None:intergenic 45.0%
! TCTGTGTTGGAGTTTGAAGC+AGG - chr1_1:28793605-28793624 None:intergenic 45.0%
AAACAGAGACGAAGCTGGAT+TGG + chr1_1:28793815-28793834 Msa0017390:intron 45.0%
AAAAGCAGGAGATAACGTGG+AGG - chr1_1:28794237-28794256 None:intergenic 45.0%
GAGACCAAAAATTGCAGCTG+TGG - chr1_1:28794718-28794737 None:intergenic 45.0%
GAACATTCCGTATGCAGATG+AGG + chr1_1:28795519-28795538 Msa0017390:CDS 45.0%
TCATCACCCTCATCTGCATA+CGG - chr1_1:28795529-28795548 None:intergenic 45.0%
!! TAGTGGAAAGAGTGTTGGGA+TGG + chr1_1:28795854-28795873 Msa0017390:CDS 45.0%
! GTTTTCCAGTATGCCAACCA+AGG + chr1_1:28796004-28796023 Msa0017390:three_prime_UTR 45.0%
CAACCCAGATCCATGAGTAA+CGG + chr1_1:28796045-28796064 Msa0017390:three_prime_UTR 45.0%
AACCCAGATCCATGAGTAAC+GGG + chr1_1:28796046-28796065 Msa0017390:three_prime_UTR 45.0%
! AGGCTACCAAGAAGCTTTGT+GGG + chr1_1:28796311-28796330 Msa0017390:three_prime_UTR 45.0%
! ACCAAGAAGCTTTGTGGGAA+CGG + chr1_1:28796316-28796335 Msa0017390:three_prime_UTR 45.0%
TGCATGCGTTACAGTCAATC+AGG - chr1_1:28796592-28796611 None:intergenic 45.0%
!! TTAATAAATGAATAATAATT+TGG - chr1_1:28784134-28784153 None:intergenic 5.0%
!!! ATTATTTTTTTTGAAAAATT+CGG + chr1_1:28789721-28789740 Msa0017390:intron 5.0%
!!! TATTTTTAATGTTTTTTTTA+GGG - chr1_1:28789798-28789817 None:intergenic 5.0%
!!! ATATTTTTAATGTTTTTTTT+AGG - chr1_1:28789799-28789818 None:intergenic 5.0%
!! TAAATAATCAAAATATTTAA+CGG + chr1_1:28792085-28792104 Msa0017390:intron 5.0%
!!! TTTTTTTTTTTTTATCTTTT+AGG + chr1_1:28794896-28794915 Msa0017390:intron 5.0%
CTCTCTCTCTCGATCAGATC+GGG + chr1_1:28784259-28784278 Msa0017390:five_prime_UTR 50.0%
ACGCCATTTGAGAAAAGGGG+AGG - chr1_1:28784467-28784486 None:intergenic 50.0%
CCGACGCCATTTGAGAAAAG+GGG - chr1_1:28784470-28784489 None:intergenic 50.0%
! CCCCTTTTCTCAAATGGCGT+CGG + chr1_1:28784467-28784486 Msa0017390:exon 50.0%
GCCGACGCCATTTGAGAAAA+GGG - chr1_1:28784471-28784490 None:intergenic 50.0%
AGCCGACGCCATTTGAGAAA+AGG - chr1_1:28784472-28784491 None:intergenic 50.0%
!! AAGCAAGAGCATCTCGAAGC+TGG + chr1_1:28784501-28784520 Msa0017390:CDS 50.0%
TCTCGAAGCTGGAAAACGTC+GGG + chr1_1:28784512-28784531 Msa0017390:CDS 50.0%
! TGGAGGGACCTTACTAGCTT+CGG + chr1_1:28785198-28785217 Msa0017390:intron 50.0%
TGTTGGAAGGAACTAGGCCT+AGG + chr1_1:28785550-28785569 Msa0017390:intron 50.0%
TATTTGGGTCTTGCAGCTGG+AGG + chr1_1:28786089-28786108 Msa0017390:intron 50.0%
! ACCACATCTGATGGCATTGG+CGG + chr1_1:28786249-28786268 Msa0017390:CDS 50.0%
TACATCTACCACTAGTCCGG+TGG + chr1_1:28786380-28786399 Msa0017390:CDS 50.0%
!! GGTGTTGGTGGATTTCCGTA+TGG + chr1_1:28786525-28786544 Msa0017390:CDS 50.0%
ACTAGTCAGTCCAGCCTTCA+TGG + chr1_1:28786609-28786628 Msa0017390:CDS 50.0%
!! TCACATGGTTCGGTTTCTGG+AGG + chr1_1:28786795-28786814 Msa0017390:CDS 50.0%
!! AACTTAGAGGCGTCTTGCTC+AGG - chr1_1:28787172-28787191 None:intergenic 50.0%
GCAATATTAAGGGGGAGCCT+TGG + chr1_1:28787905-28787924 Msa0017390:intron 50.0%
GTTGTTGTCGCGTGACTGAA+AGG + chr1_1:28787940-28787959 Msa0017390:intron 50.0%
CTGCGCACGATACACCAAAA+TGG + chr1_1:28788014-28788033 Msa0017390:intron 50.0%
CGCACGATACACCAAAATGG+TGG + chr1_1:28788017-28788036 Msa0017390:intron 50.0%
! GGGAAAAGGTCCCACCATTT+TGG - chr1_1:28788031-28788050 None:intergenic 50.0%
TTCTTTGCAACGCGCTCTTG+AGG + chr1_1:28788498-28788517 Msa0017390:intron 50.0%
! ACATCAACAGGTTGAGCTGG+AGG + chr1_1:28789266-28789285 Msa0017390:intron 50.0%
AACCTCTTCATCCGAAACCC+AGG + chr1_1:28789987-28790006 Msa0017390:intron 50.0%
TACCTGGGTTTCGGATGAAG+AGG - chr1_1:28789992-28790011 None:intergenic 50.0%
! TGGACATTGCATTGGTCGGA+TGG - chr1_1:28790297-28790316 None:intergenic 50.0%
CCCATGGTTTCTGCCAGAAA+TGG + chr1_1:28790736-28790755 Msa0017390:intron 50.0%
CGGTGTCCTTCAACACAATC+TGG + chr1_1:28791319-28791338 Msa0017390:intron 50.0%
TGGTTGACTGCAAATCACGG+CGG - chr1_1:28791524-28791543 None:intergenic 50.0%
GTATGTCCCACCACTTTGTG+TGG - chr1_1:28791989-28792008 None:intergenic 50.0%
TCTAGCACTCACTCTCTTCC+TGG - chr1_1:28792023-28792042 None:intergenic 50.0%
! AGATGGCTCTACATCTACCG+AGG + chr1_1:28793035-28793054 Msa0017390:CDS 50.0%
!! AGGTGTTGCTCCTTACTGCT+TGG + chr1_1:28793876-28793895 Msa0017390:intron 50.0%
TGACCAAGACAAACCAGCTC+TGG - chr1_1:28794392-28794411 None:intergenic 50.0%
CCTGAGCAAAGTAGCAACTG+AGG - chr1_1:28794461-28794480 None:intergenic 50.0%
!! CCTCAGTTGCTACTTTGCTC+AGG + chr1_1:28794458-28794477 Msa0017390:intron 50.0%
TCTCAGTTACCCTTTGGCAC+TGG + chr1_1:28794603-28794622 Msa0017390:intron 50.0%
TTGCAGCTGTGGCAAAAGCT+GGG - chr1_1:28794707-28794726 None:intergenic 50.0%
ATTGCAGCTGTGGCAAAAGC+TGG - chr1_1:28794708-28794727 None:intergenic 50.0%
GTATGCAGATGAGGGTGATG+AGG + chr1_1:28795528-28795547 Msa0017390:CDS 50.0%
CTTTGCCTTGGTTGGCATAC+TGG - chr1_1:28796012-28796031 None:intergenic 50.0%
!! AATGCGCTGGTTCTTTGCCT+TGG - chr1_1:28796024-28796043 None:intergenic 50.0%
GACCCGTTACTCATGGATCT+GGG - chr1_1:28796051-28796070 None:intergenic 50.0%
TGACCCGTTACTCATGGATC+TGG - chr1_1:28796052-28796071 None:intergenic 50.0%
CTTTGCTGACCCGTTACTCA+TGG - chr1_1:28796058-28796077 None:intergenic 50.0%
TGTTCGTTGCCTCAGTACAC+TGG + chr1_1:28796095-28796114 Msa0017390:three_prime_UTR 50.0%
GAGGCTACCAAGAAGCTTTG+TGG + chr1_1:28796310-28796329 Msa0017390:three_prime_UTR 50.0%
! CCAAGAAGCTTTGTGGGAAC+GGG + chr1_1:28796317-28796336 Msa0017390:three_prime_UTR 50.0%
! CAAGAAGCTTTGTGGGAACG+GGG + chr1_1:28796318-28796337 Msa0017390:three_prime_UTR 50.0%
GGCTCTCTCTCTTCTGTCTC+TGG - chr1_1:28784113-28784132 None:intergenic 55.0%
!! TTCTCAAATGGCGTCGGCTC+AGG + chr1_1:28784473-28784492 Msa0017390:exon 55.0%
GGATTGCACGCAGGGTATAC+CGG - chr1_1:28785027-28785046 None:intergenic 55.0%
AACTCGGAGGATTGCACGCA+GGG - chr1_1:28785035-28785054 None:intergenic 55.0%
TGCGTGCAATCCTCCGAGTT+GGG + chr1_1:28785035-28785054 Msa0017390:intron 55.0%
! TGCAATCCTCCGAGTTGGGT+GGG + chr1_1:28785039-28785058 Msa0017390:intron 55.0%
! GAGAGTTTTGCCACCCATCG+TGG - chr1_1:28785066-28785085 None:intergenic 55.0%
AGTCTTCTTGGCCCGCTCTT+CGG - chr1_1:28786133-28786152 None:intergenic 55.0%
GCCAAGAAGACTGCATCCTC+TGG + chr1_1:28786141-28786160 Msa0017390:CDS 55.0%
GCCAGAGGATGCAGTCTTCT+TGG - chr1_1:28786145-28786164 None:intergenic 55.0%
TCCGCCAATGCCATCAGATG+TGG - chr1_1:28786253-28786272 None:intergenic 55.0%
GCGGAGCTGTTACTGACACT+GGG + chr1_1:28786268-28786287 Msa0017390:CDS 55.0%
ATCTACCACTAGTCCGGTGG+AGG + chr1_1:28786383-28786402 Msa0017390:CDS 55.0%
! ATGTTCCTCCACCGGACTAG+TGG - chr1_1:28786391-28786410 None:intergenic 55.0%
GGAATTCACACCGGTGGTGT+TGG + chr1_1:28786510-28786529 Msa0017390:CDS 55.0%
! ATTCACACCGGTGGTGTTGG+TGG + chr1_1:28786513-28786532 Msa0017390:CDS 55.0%
CGGAAATCCACCAACACCAC+CGG - chr1_1:28786523-28786542 None:intergenic 55.0%
GTCGCGTGACTGAAAGGTCA+CGG + chr1_1:28787946-28787965 Msa0017390:intron 55.0%
TCGCGTGACTGAAAGGTCAC+GGG + chr1_1:28787947-28787966 Msa0017390:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG - chr1_1:28788057-28788076 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG - chr1_1:28788058-28788077 None:intergenic 55.0%
CTTCCCTCTGCCTCTGTCTT+CGG + chr1_1:28789226-28789245 Msa0017390:intron 55.0%
CTACCGAAGACAGAGGCAGA+GGG - chr1_1:28789232-28789251 None:intergenic 55.0%
TCTACCGAAGACAGAGGCAG+AGG - chr1_1:28789233-28789252 None:intergenic 55.0%
!!! ACGGCGGTCTTTTTCAAGGC+TGG - chr1_1:28791508-28791527 None:intergenic 55.0%
!! GGACTGATGATGGTAGGGCT+AGG + chr1_1:28791668-28791687 Msa0017390:intron 55.0%
TGGCGGTGTTCTGCCCATAT+TGG + chr1_1:28792119-28792138 Msa0017390:intron 55.0%
TAGTTGCTCTCTGCCAGAGC+TGG + chr1_1:28794376-28794395 Msa0017390:intron 55.0%
!! CTGCCAGAGCTGGTTTGTCT+TGG + chr1_1:28794386-28794405 Msa0017390:intron 55.0%
TGCAGCTGTGGCAAAAGCTG+GGG - chr1_1:28794706-28794725 None:intergenic 55.0%
GGAGTTGTCCCGGAAACTTG+AGG + chr1_1:28795396-28795415 Msa0017390:CDS 55.0%
GGTCTGGACCTCAAGTTTCC+GGG - chr1_1:28795407-28795426 None:intergenic 55.0%
GGGTCTGGACCTCAAGTTTC+CGG - chr1_1:28795408-28795427 None:intergenic 55.0%
!! CGCTGGTTCTTTGCCTTGGT+TGG - chr1_1:28796020-28796039 None:intergenic 55.0%
! GGATCTGGGTTGAAATGCGC+TGG - chr1_1:28796037-28796056 None:intergenic 55.0%
TCGTTGCCTCAGTACACTGG+AGG + chr1_1:28796098-28796117 Msa0017390:three_prime_UTR 55.0%
CGTTGCCTCAGTACACTGGA+GGG + chr1_1:28796099-28796118 Msa0017390:three_prime_UTR 55.0%
CCCGTTCCCACAAAGCTTCT+TGG - chr1_1:28796320-28796339 None:intergenic 55.0%
AACCTTGCTCATGCTGCGAG+AGG + chr1_1:28796526-28796545 Msa0017390:three_prime_UTR 55.0%
AACCTCTCGCAGCATGAGCA+AGG - chr1_1:28796531-28796550 None:intergenic 55.0%
!! AAATGGCGTCGGCTCAGGTG+AGG + chr1_1:28784478-28784497 Msa0017390:exon 60.0%
CAACTCGGAGGATTGCACGC+AGG - chr1_1:28785036-28785055 None:intergenic 60.0%
CTGCGTGCAATCCTCCGAGT+TGG + chr1_1:28785034-28785053 Msa0017390:intron 60.0%
! GTGCAATCCTCCGAGTTGGG+TGG + chr1_1:28785038-28785057 Msa0017390:intron 60.0%
CATCGTGGTCCCACCCAACT+CGG - chr1_1:28785051-28785070 None:intergenic 60.0%
GAGTTGGGTGGGACCACGAT+GGG + chr1_1:28785050-28785069 Msa0017390:intron 60.0%
GGCGGAGCTGTTACTGACAC+TGG + chr1_1:28786267-28786286 Msa0017390:CDS 60.0%
! AAGGGGGAGCCTTGGTGCAA+CGG + chr1_1:28787913-28787932 Msa0017390:intron 60.0%
CATACGCAGGGTCCGGGAAA+AGG - chr1_1:28788045-28788064 None:intergenic 60.0%
TTTCCCGGACCCTGCGTATG+CGG + chr1_1:28788045-28788064 Msa0017390:intron 60.0%
!! CTTCGTTTTGACGGCCCACC+AGG - chr1_1:28795895-28795914 None:intergenic 60.0%
TCACGCCCTCCAGTGTACTG+AGG - chr1_1:28796107-28796126 None:intergenic 60.0%
! CGAGTTGGGTGGGACCACGA+TGG + chr1_1:28785049-28785068 Msa0017390:intron 65.0%
TTGGGTGGGACCACGATGGG+TGG + chr1_1:28785053-28785072 Msa0017390:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG + chr1_1:28788046-28788065 Msa0017390:intron 65.0%
AGCTGGGGCCAGACCGCAAT+TGG - chr1_1:28794691-28794710 None:intergenic 65.0%
CGTGGTCCCACCCAACTCGG+AGG - chr1_1:28785048-28785067 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG - chr1_1:28788051-28788070 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG - chr1_1:28788052-28788071 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 28784095 28796613 28784095 ID=Msa0017390;Name=Msa0017390
chr1_1 mRNA 28784095 28796613 28784095 ID=Msa0017390-mRNA-1;Parent=Msa0017390;Name=Msa0017390-mRNA-1;_AED=0.12;_eAED=0.12;_QI=365|0.66|0.68|1|0.66|0.56|16|680|700
chr1_1 exon 28784095 28784230 28784095 ID=Msa0017390-mRNA-1:exon:9611;Parent=Msa0017390-mRNA-1
chr1_1 exon 28784251 28784533 28784251 ID=Msa0017390-mRNA-1:exon:9612;Parent=Msa0017390-mRNA-1
chr1_1 exon 28786105 28786327 28786105 ID=Msa0017390-mRNA-1:exon:9613;Parent=Msa0017390-mRNA-1
chr1_1 exon 28786337 28786564 28786337 ID=Msa0017390-mRNA-1:exon:9614;Parent=Msa0017390-mRNA-1
chr1_1 exon 28786586 28786816 28786586 ID=Msa0017390-mRNA-1:exon:9615;Parent=Msa0017390-mRNA-1
chr1_1 exon 28786963 28787193 28786963 ID=Msa0017390-mRNA-1:exon:9616;Parent=Msa0017390-mRNA-1
chr1_1 exon 28787203 28787414 28787203 ID=Msa0017390-mRNA-1:exon:9617;Parent=Msa0017390-mRNA-1
chr1_1 exon 28788933 28788998 28788933 ID=Msa0017390-mRNA-1:exon:9618;Parent=Msa0017390-mRNA-1
chr1_1 exon 28789276 28789386 28789276 ID=Msa0017390-mRNA-1:exon:9619;Parent=Msa0017390-mRNA-1
chr1_1 exon 28790593 28790669 28790593 ID=Msa0017390-mRNA-1:exon:9620;Parent=Msa0017390-mRNA-1
chr1_1 exon 28791494 28791561 28791494 ID=Msa0017390-mRNA-1:exon:9621;Parent=Msa0017390-mRNA-1
chr1_1 exon 28792962 28793063 28792962 ID=Msa0017390-mRNA-1:exon:9622;Parent=Msa0017390-mRNA-1
chr1_1 exon 28793591 28793775 28793591 ID=Msa0017390-mRNA-1:exon:9623;Parent=Msa0017390-mRNA-1
chr1_1 exon 28794003 28794071 28794003 ID=Msa0017390-mRNA-1:exon:9624;Parent=Msa0017390-mRNA-1
chr1_1 exon 28795385 28795549 28795385 ID=Msa0017390-mRNA-1:exon:9625;Parent=Msa0017390-mRNA-1
chr1_1 exon 28795853 28796613 28795853 ID=Msa0017390-mRNA-1:exon:9626;Parent=Msa0017390-mRNA-1
chr1_1 five_prime_UTR 28784095 28784230 28784095 ID=Msa0017390-mRNA-1:five_prime_utr;Parent=Msa0017390-mRNA-1
chr1_1 five_prime_UTR 28784251 28784479 28784251 ID=Msa0017390-mRNA-1:five_prime_utr;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28784480 28784533 28784480 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28786105 28786327 28786105 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28786337 28786564 28786337 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28786586 28786816 28786586 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28786963 28787193 28786963 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28787203 28787414 28787203 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28788933 28788998 28788933 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28789276 28789386 28789276 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28790593 28790669 28790593 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28791494 28791561 28791494 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28792962 28793063 28792962 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28793591 28793775 28793591 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28794003 28794071 28794003 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28795385 28795549 28795385 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 CDS 28795853 28795933 28795853 ID=Msa0017390-mRNA-1:cds;Parent=Msa0017390-mRNA-1
chr1_1 three_prime_UTR 28795934 28796613 28795934 ID=Msa0017390-mRNA-1:three_prime_utr;Parent=Msa0017390-mRNA-1
Gene Sequence

>Msa0017390

ATGGCGTCGGCTCAGGTGAGGAAGCAAGAGCATCTCGAAGCTGGAAAACGTCGGCTGGAGGAGTTTCGTAAAAAGAAAGCCGAAGAGCGGGCCAAGAAGACTGCATCCTCTGGCACTGTTCAGAATTCTAAAGCCAGCCAAAATCAGAAACAGCCTGTGCAAGTTGAAAATGTTCGAGTTAATGAGTTAGATGGAGTTACCACATCTGATGGCATTGGCGGAGCTGTTACTGACACTGGGACAAGTAGCCAGAATGTGAATTTGTTTAACCAAAGTAGGTCTTTAGCTGGTGCAAGTAGTCTTGTGAGAAATGATCTTAATACATCTACCACTAGTCCGGTGGAGGAACATTCAGATATTGATGAAGGTAAAAGATACAATGCTTCTACTTTTATTACATCTGAAGATGTTAGTCAAAATAGTGACGCAAATGAAACAAATGATATATATGGAATTCACACCGGTGGTGTTGGTGGATTTCCGTATGGAACAACAAACCACCAAAGAAGTCAAGAGTTTGATAACAGTACTAGTCAGTCCAGCCTTCATGGAATGAATGGAAGCCAGCCAAACAAGAGTAACAATTCTGTGAAGGATTATGCAGTTACTGATGGCTCTTCTCCTTACTTTCCGTCAAAAATCATACGTGAGAACTCTGTTGATTCACTACAGAAAGCTAAGCCGACAAATTCTAGCACTTTGGATAGTGGCTCTTCACATGGTTCGGTTTCTGGAGAGACCATTAGATCTGATAGTGATTTGCCTAGTCTTCATGGTGCAACTATACCTAAATATGATTCCATTGGTTATGAAGTGAGGAATTCCTCTAACCATTCACCAATAAATTCAACATCAACGGAATCAAGTTCTAGAAAGTCACGTCCATCTTTTCTTGATTCTCTAAATGTTGCTAGACCTTCTACGGGGTCTCCATTTTATCAACCTGAGCAAGACGCCTCTAAGTTTAAATCAAGCAGCAATGACACATCAGGGTCTACTTATTTCCATAAGCCACCTGAAGACACTAAAACTGTGGGACTTTTCTCAAATCATACAACTGCTCCAGTTTTTAGTAATAATCAGGACACACCGATGATAAGTGCTAAGGAAAATGGCATGGAGAAGAAGCACGACTTTTACTCATCTTCACATAATGAAGACTTTTCAACTTTAGAACAGAGAAGTGTTGTCAATCAATTGAAATCAGAAATGGAGAACTTACAGCAAGAGATCAAAGCACAACTGGTTGAGCTGGAGGCTATCAAGAGTGAATATACAAATGTGCAACTTGAGTGTAATGCAGCTGATGAGCGTGCCAAGTTATTGGCATCCGAAGTCATTGGCTTAGAGGAGAAGGCACTCAGACTAAGATCAAATGAGTTAAAGCTTGAGAAGCAGCTGGAAATTGAACAAGCAGAAATTTCTTCATACAGAAAGAAAATGTCCAGCCTTGAAAAAGACCGCCGTGATTTGCAGTCAACCATTGATGCTCTTCAAGAAGAAAAGAAGATGTTGCTGTCTAAGGTACGAAAGGCTTCAGGATTCGGAAAACCTGAGAATAAAACAAGTAAAAGAGATGGCTCTACATCTACCGAGGATTTAGTGAGTGAAGATCCTGCTTCAAACTCCAACACAGAAATCAATGACAATGCTGCTGTTCGTGATGCTGAAACATCTAGTTTGTCCATAGTTCCTGAAACTACACATTCATCTTTTGGAGTTTCTCCTGTGAATATTCCTCATGATCAGATGAGAGTGATTGAGAACATTAATGCACTTATTTCTGAGCTGGCATTGGAGAAAGAAGAATTGATGAAATCCTTGGCATTTGAATCATCTGAGAGTTCAAGAATGAAGGAGATAAACAAGGAGTTGTCCCGGAAACTTGAGGTCCAGACCCAAAGATTAGAGCTTTTGACTACTCAAAACATGGTTAATGGAAATATTGATAATATTTCGACAAAACAACCAGATTCTCGTGTTACGTATGAGAACATTCCGTATGCAGATGAGGGTGATGAGGTAGTGGAAAGAGTGTTGGGATGGATTATGAAGCTATTTCCTGGTGGGCCGTCAAAACGAAGAACTAGCAAGCTTCTCTGA
Protein sequence

>Msa0017390

MASAQVRKQEHLEAGKRRLEEFRKKKAEERAKKTASSGTVQNSKASQNQKQPVQVENVRVNELDGVTTSDGIGGAVTDTGTSSQNVNLFNQSRSLAGASSLVRNDLNTSTTSPVEEHSDIDEGKRYNASTFITSEDVSQNSDANETNDIYGIHTGGVGGFPYGTTNHQRSQEFDNSTSQSSLHGMNGSQPNKSNNSVKDYAVTDGSSPYFPSKIIRENSVDSLQKAKPTNSSTLDSGSSHGSVSGETIRSDSDLPSLHGATIPKYDSIGYEVRNSSNHSPINSTSTESSSRKSRPSFLDSLNVARPSTGSPFYQPEQDASKFKSSSNDTSGSTYFHKPPEDTKTVGLFSNHTTAPVFSNNQDTPMISAKENGMEKKHDFYSSSHNEDFSTLEQRSVVNQLKSEMENLQQEIKAQLVELEAIKSEYTNVQLECNAADERAKLLASEVIGLEEKALRLRSNELKLEKQLEIEQAEISSYRKKMSSLEKDRRDLQSTIDALQEEKKMLLSKVRKASGFGKPENKTSKRDGSTSTEDLVSEDPASNSNTEINDNAAVRDAETSSLSIVPETTHSSFGVSPVNIPHDQMRVIENINALISELALEKEELMKSLAFESSESSRMKEINKELSRKLEVQTQRLELLTTQNMVNGNIDNISTKQPDSRVTYENIPYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL*