AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0079110


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079110 MtrunA17_Chr1g0190001 97.599 708 8 1 1 708 1 699 0.0 1415
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0079110 AT1G71270.1 81.727 695 117 2 14 708 23 707 0.0 1184
Msa0079110 AT1G71300.2 76.252 699 150 3 16 708 13 701 0.0 1107
Msa0079110 AT1G71300.1 73.370 736 152 6 16 708 13 747 0.0 1097

Find 153 sgRNAs with CRISPR-Local

Find 624 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGACACTTTGTTGAAGTATT+TGG 0.142382 1_2:-56851005 None:intergenic
AAAACATACATTGGATATTA+TGG 0.143109 1_2:-56857355 None:intergenic
AAACTCACTTGTACTTTAAA+AGG 0.194550 1_2:-56851026 None:intergenic
AACTAAAACAGATTGTAATT+TGG 0.200162 1_2:-56847559 None:intergenic
GCAACATCCTATGATTTAAT+TGG 0.226169 1_2:+56852400 Msa0079110:CDS
AAGTATTTGGATATTTGTTT+TGG 0.230134 1_2:-56850992 None:intergenic
ATTCCAGCAACTAAGATCTT+AGG 0.236093 1_2:+56857618 Msa0079110:three_prime_UTR
TACATTGGATATTATGGATT+TGG 0.243421 1_2:-56857349 None:intergenic
AGAAACACCGTTTGTAGTTT+TGG 0.244653 1_2:-56855972 None:intergenic
AACTCTGCTAAGTGGATTTC+AGG 0.248051 1_2:+56848943 Msa0079110:CDS
ATCCACTTAAACTCTGAGTT+TGG 0.250844 1_2:+56855787 Msa0079110:CDS
TATTATCACAATCATGAATT+TGG 0.261483 1_2:-56848904 None:intergenic
GCCATTGACGTGATGAGATT+TGG 0.261744 1_2:-56847179 None:intergenic
CTCATACATGATTGAAGATA+TGG 0.264600 1_2:-56857261 None:intergenic
GCAAGAGAAGTCTATGGATA+TGG 0.265601 1_2:+56849445 Msa0079110:CDS
CACAATTTAATAAATTGATT+TGG 0.280183 1_2:+56857684 Msa0079110:three_prime_UTR
GCAACAGTTATAGGTTTATC+AGG 0.284406 1_2:-56857026 None:intergenic
CGCTTTATACTTACAGGCTT+TGG 0.287857 1_2:-56856880 None:intergenic
TCCACTTCCGCAACAGTTAT+AGG 0.293677 1_2:-56857035 None:intergenic
TTAGTATAATCTCTAAGTTT+TGG 0.301178 1_2:-56848604 None:intergenic
TCCACTTAAACTCTGAGTTT+GGG 0.308316 1_2:+56855788 Msa0079110:CDS
AGTGGAGTTGGATTCAATTC+AGG 0.310032 1_2:+56848651 Msa0079110:CDS
TTGCATTTCGCAAACTGTTC+AGG 0.341180 1_2:-56855687 None:intergenic
TTGGTTTATACAGGTCCTTT+TGG 0.364770 1_2:+56854092 Msa0079110:intron
GAGCTTGCAGAAGCTGCTTA+TGG 0.365008 1_2:+56853262 Msa0079110:CDS
CCATTGACGTGATGAGATTT+GGG 0.371241 1_2:-56847178 None:intergenic
CCTTCTAGTGCATTTGATCT+AGG 0.372542 1_2:+56847464 Msa0079110:CDS
GCTGGAATGCCATGCTCAAC+AGG 0.375148 1_2:-56857603 None:intergenic
ATTGCAGCTTGAACTGAATC+TGG 0.380544 1_2:+56855890 Msa0079110:intron
TTAAATCATTAAAATGCTCT+TGG 0.392587 1_2:-56856842 None:intergenic
TGATAATATCTTGTCACATA+TGG 0.393000 1_2:+56848919 Msa0079110:CDS
CTCTGAGTTTGGGGATGGTC+AGG 0.393038 1_2:+56855798 Msa0079110:CDS
ACCTATAACTGTTGCGGAAG+TGG 0.396596 1_2:+56857034 Msa0079110:CDS
CTTCAATCATGTATGAGATT+AGG 0.397107 1_2:+56857267 Msa0079110:CDS
TCGGAGGCGGATTCCATGCT+TGG 0.397429 1_2:+56854638 Msa0079110:CDS
TTTAATAAATTGATTTGGAT+TGG 0.397531 1_2:+56857689 Msa0079110:three_prime_UTR
CCCACCAGGGATCCTCTTGA+TGG 0.398438 1_2:-56857213 None:intergenic
ATTTCAGGAAATTGATGAAC+CGG 0.399043 1_2:+56853178 Msa0079110:intron
ATCCCTAAGATCTTAGTTGC+TGG 0.401540 1_2:-56857621 None:intergenic
ATCCATATGAAGTTCTGTTC+AGG 0.405654 1_2:+56853240 Msa0079110:CDS
TTTATTTACCAGGCTGAGAT+TGG 0.409163 1_2:+56849395 Msa0079110:intron
AATTCTGCAAGAGAAGTCTA+TGG 0.414810 1_2:+56849439 Msa0079110:CDS
TACATCTATAGTTACCGAAT+TGG 0.416199 1_2:+56857424 Msa0079110:three_prime_UTR
TCGTATAGTAAAGTAGCAAT+TGG 0.417834 1_2:-56857178 None:intergenic
CCTATAGCATCATAGCAGTT+TGG 0.418595 1_2:-56854146 None:intergenic
CTCCTGAACAGAACTTCATA+TGG 0.421045 1_2:-56853242 None:intergenic
CTCTACACCAATTAAATCAT+AGG 0.428333 1_2:-56852407 None:intergenic
TTCCACAAACTTAGCCAGCT+TGG 0.428764 1_2:-56849803 None:intergenic
AATTATACAGAATGCAAATA+CGG 0.434615 1_2:+56857514 Msa0079110:three_prime_UTR
ACCATTGAAGAAGATCTAAA+CGG 0.434766 1_2:+56847506 Msa0079110:CDS
CCCCAAACTCAGAGTTTAAG+TGG 0.436616 1_2:-56855789 None:intergenic
CCCGTTTAGATCTTCTTCAA+TGG 0.437299 1_2:-56847507 None:intergenic
CAAAATTCAAATGCACTTTG+AGG 0.439404 1_2:+56856254 Msa0079110:CDS
CATGTGATTTGAAGAAGAAA+AGG 0.439416 1_2:-56847241 None:intergenic
ATTCTTCAACAATGCCAATT+CGG 0.448022 1_2:-56857438 None:intergenic
GAAACTGAAGTTTGTAGAAG+TGG 0.448325 1_2:+56850710 Msa0079110:CDS
TATGTTAGATGGACTTCAAC+AGG 0.449594 1_2:+56847652 Msa0079110:intron
CCTAGATCAAATGCACTAGA+AGG 0.458119 1_2:-56847464 None:intergenic
CCAAACTGCTATGATGCTAT+AGG 0.459765 1_2:+56854146 Msa0079110:CDS
TGATTTGCGCAAAGTGGAGT+TGG 0.463004 1_2:+56848639 Msa0079110:CDS
CAAATCAATTTATTAAATTG+TGG 0.466205 1_2:-56857683 None:intergenic
TCAATATTTCCCTATGGCCT+CGG 0.467395 1_2:+56855641 Msa0079110:CDS
AGCATTGGAGAAACTGCAAT+TGG 0.468009 1_2:+56852372 Msa0079110:CDS
TGCTCATCCATGACACCAAA+AGG 0.473405 1_2:-56854107 None:intergenic
ATATGGATATTTAATAGAGC+TGG 0.474130 1_2:-56853225 None:intergenic
GGCAGGTCAATATTTCCCTA+TGG 0.475047 1_2:+56855635 Msa0079110:intron
GTTTATCAGGACTCGATGTT+GGG 0.475291 1_2:-56857013 None:intergenic
CCGTGCTTACATACAAGCAT+TGG 0.475768 1_2:+56852357 Msa0079110:CDS
GGTTTATCAGGACTCGATGT+TGG 0.478071 1_2:-56857014 None:intergenic
TTCCAGCAACTAAGATCTTA+GGG 0.478658 1_2:+56857619 Msa0079110:three_prime_UTR
ATCCAAGCTGGCTAAGTTTG+TGG 0.479760 1_2:+56849801 Msa0079110:CDS
CATTATTATCCCTCCGAGAA+TGG 0.482423 1_2:+56849828 Msa0079110:CDS
CCTATGGCCTCGGTTTAAGA+TGG 0.482544 1_2:+56855651 Msa0079110:CDS
AAGAAGTCATAGTTATCTGT+TGG 0.483385 1_2:+56857318 Msa0079110:three_prime_UTR
TATATGTACCATTGTGTTTG+AGG 0.486517 1_2:-56847338 None:intergenic
TTGCATTCTGTATAATTCCA+TGG 0.489937 1_2:-56857508 None:intergenic
GAGCAATACAGCATTATTTG+TGG 0.490021 1_2:+56856287 Msa0079110:CDS
AACCTGAGCTTGAAAAGCTC+AGG 0.490108 1_2:+56850772 Msa0079110:CDS
CCCAAATCTCATCACGTCAA+TGG 0.498059 1_2:+56847178 Msa0079110:five_prime_UTR
CCATTGAAGAAGATCTAAAC+GGG 0.498176 1_2:+56847507 Msa0079110:CDS
ATGGTGGACATCCTTGTTGA+TGG 0.498798 1_2:+56849847 Msa0079110:CDS
ACAAGGATGTCCACCATTCT+CGG 0.499451 1_2:-56849841 None:intergenic
AGCTCATTATGTCTCGGAGG+CGG 0.500639 1_2:+56854625 Msa0079110:intron
TCGCATAATACACCAGCATC+AGG 0.502459 1_2:+56854184 Msa0079110:CDS
CACAAAGCCAAAACTACAAA+CGG 0.504050 1_2:+56855965 Msa0079110:CDS
CAGGAAGCAGGTCCTGAAGC+TGG 0.508420 1_2:+56856231 Msa0079110:intron
CTTGATAAGTAAATCATCAA+TGG 0.510022 1_2:-56855928 None:intergenic
CAAGAGAAGTCTATGGATAT+GGG 0.510930 1_2:+56849446 Msa0079110:CDS
AGTCTATGGATATGGGTTTG+AGG 0.513380 1_2:+56849453 Msa0079110:CDS
ACAGCAGATCGATTCTTTAG+CGG 0.514662 1_2:-56852469 None:intergenic
TATTTCAGCTCATTATGTCT+CGG 0.517780 1_2:+56854619 Msa0079110:intron
GGATAGGATTAATATATTGA+AGG 0.519305 1_2:+56852504 Msa0079110:CDS
AAAACTTAGAGATTATACTA+AGG 0.519810 1_2:+56848606 Msa0079110:CDS
GAATCTGGAACGACTTAGAA+TGG 0.521290 1_2:+56855905 Msa0079110:CDS
GATTCCATCAAGAGGATCCC+TGG 0.522126 1_2:+56857209 Msa0079110:CDS
TGCAACAAATATCAAGTCCA+TGG 0.523909 1_2:+56857491 Msa0079110:three_prime_UTR
GTTGCAAATATACTATCTAA+AGG 0.530234 1_2:+56848580 Msa0079110:CDS
CATCTTAAACCGAGGCCATA+GGG 0.530347 1_2:-56855650 None:intergenic
TTGTTCAATGCAGACCCACC+AGG 0.531672 1_2:-56857227 None:intergenic
CGTATAGTAAAGTAGCAATT+GGG 0.531794 1_2:-56857177 None:intergenic
GAGCTGGCTTCAGCTATATG+AGG 0.536113 1_2:-56853209 None:intergenic
CCACTTAAACTCTGAGTTTG+GGG 0.538247 1_2:+56855789 Msa0079110:CDS
CCATCTTAAACCGAGGCCAT+AGG 0.544335 1_2:-56855651 None:intergenic
CAGGCAGAAAGCAGTCTCAA+AGG 0.545719 1_2:+56850791 Msa0079110:CDS
CATGCTTGATTCCAGGAAGC+AGG 0.549332 1_2:+56856219 Msa0079110:intron
GACTCTCTGATTCCATCAAG+AGG 0.549335 1_2:+56857201 Msa0079110:CDS
ATTATACAGAATGCAAATAC+GGG 0.550875 1_2:+56857515 Msa0079110:three_prime_UTR
AAACTTAGAGATTATACTAA+GGG 0.553199 1_2:+56848607 Msa0079110:CDS
GAATTGGCATTGTTGAAGAA+TGG 0.553471 1_2:+56857440 Msa0079110:three_prime_UTR
TGAGAATGATTTGCGCAAAG+TGG 0.554547 1_2:+56848633 Msa0079110:CDS
CTTGGATTCTTATTTAGACA+AGG 0.558627 1_2:+56854656 Msa0079110:CDS
GGAAGTGGAGCCACTGGTGA+AGG 0.561875 1_2:+56857049 Msa0079110:CDS
TAACGCCTCATGACATAATG+AGG 0.563593 1_2:-56855742 None:intergenic
GTATGTTGTTAACTTTCTCA+AGG 0.565046 1_2:+56851589 Msa0079110:CDS
GTTAACTTTCTCAAGGAACA+TGG 0.568981 1_2:+56851596 Msa0079110:CDS
TCTAAATAAGAATCCAAGCA+TGG 0.575363 1_2:-56854651 None:intergenic
TTAAACTCTGAGTTTGGGGA+TGG 0.578938 1_2:+56855793 Msa0079110:CDS
CCAATGCTTGTATGTAAGCA+CGG 0.580622 1_2:-56852357 None:intergenic
TGATTTAATCAAGTTTGTCA+AGG 0.581810 1_2:+56856857 Msa0079110:CDS
TGGTGGGTCTGCATTGAACA+AGG 0.583690 1_2:+56857229 Msa0079110:CDS
GTCAGAATGTTACCTGATGC+TGG 0.583853 1_2:-56854196 None:intergenic
TGATAAACCTATAACTGTTG+CGG 0.590582 1_2:+56857028 Msa0079110:CDS
CATATGGAAACTCTGCTAAG+TGG 0.592668 1_2:+56848935 Msa0079110:CDS
CAATTTCTACACAAACAAGA+TGG 0.602918 1_2:+56847306 Msa0079110:exon
GCTATATGAGGAATCAAAGC+CGG 0.605953 1_2:-56853197 None:intergenic
ATAGGTGGCTGAATCCAAGC+TGG 0.607893 1_2:+56849789 Msa0079110:intron
TTCATCCTCATTATGTCATG+AGG 0.609555 1_2:+56855737 Msa0079110:CDS
TGTTGCGGAAGTGGAGCCAC+TGG 0.613209 1_2:+56857043 Msa0079110:CDS
ATGCAAATGTGAAGACATTG+TGG 0.614201 1_2:+56855704 Msa0079110:CDS
TGGACTTCAACAGGAGCTTG+AGG 0.615166 1_2:+56847661 Msa0079110:CDS
ATGAGATTTGGGAGACACGT+CGG 0.618823 1_2:-56847167 None:intergenic
TTTGATCTAGGAGCATTCGT+TGG 0.622940 1_2:+56847476 Msa0079110:CDS
TATTATCCCTCCGAGAATGG+TGG 0.631865 1_2:+56849831 Msa0079110:CDS
TGCAAATGTGAAGACATTGT+GGG 0.634645 1_2:+56855705 Msa0079110:CDS
TCGAATACCATCTTAAACCG+AGG 0.634683 1_2:-56855658 None:intergenic
GTTTGTAGAAGTGGACACAA+TGG 0.634918 1_2:+56850719 Msa0079110:CDS
TTATGTCATGAGGCGTTATG+CGG 0.635931 1_2:+56855747 Msa0079110:CDS
GGATGTCCACCATTCTCGGA+GGG 0.636579 1_2:-56849837 None:intergenic
TTTGAGGCTTAAGAATCGCA+AGG 0.639267 1_2:+56849469 Msa0079110:CDS
TTCAGCTCATTATGTCTCGG+AGG 0.639985 1_2:+56854622 Msa0079110:intron
CCATCAAGAGGATCCCTGGT+GGG 0.646372 1_2:+56857213 Msa0079110:CDS
ATGAGATTAGGAAATATTCG+AGG 0.647688 1_2:+56857279 Msa0079110:CDS
TTTGAAGAAGAAAAGGTGTG+AGG 0.650533 1_2:-56847234 None:intergenic
GGACATCCTTGTTGATGGAG+AGG 0.650934 1_2:+56849852 Msa0079110:CDS
TCCATCAAGAGGATCCCTGG+TGG 0.661975 1_2:+56857212 Msa0079110:CDS
CTTGCAAAATCCTTCACCAG+TGG 0.665825 1_2:-56857059 None:intergenic
TTATATTGATACAATGAACA+AGG 0.679968 1_2:+56851649 Msa0079110:CDS
TGTTCAATGCAGACCCACCA+GGG 0.681342 1_2:-56857226 None:intergenic
ATAATACCTCTCCATCAACA+AGG 0.682669 1_2:-56849858 None:intergenic
TGATGTCGCCTCAAACACAA+TGG 0.699806 1_2:+56847330 Msa0079110:CDS
AGGATGTCCACCATTCTCGG+AGG 0.702552 1_2:-56849838 None:intergenic
CTGCAGATATAATTTCTGTG+AGG 0.705047 1_2:+56853399 Msa0079110:intron
GTAGAGACAAGAAGCAACAG+CGG 0.747225 1_2:+56852424 Msa0079110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATGTTTTATATCAATATTTT+CGG + chr1_2:56847786-56847805 Msa0079110:intron 10.0%
!!! AAATTTTAATTTTATTTACC+AGG + chr1_2:56849385-56849404 Msa0079110:intron 10.0%
!! AGAAATTAATAAAACATTAT+TGG - chr1_2:56849913-56849932 None:intergenic 10.0%
!!! ATATATATTTTCTAATACTT+TGG + chr1_2:56850178-56850197 Msa0079110:intron 10.0%
!! TTGATCAATAAAAATATTAA+TGG - chr1_2:56851698-56851717 None:intergenic 10.0%
!! TGTTATATTATTCAATTATT+TGG - chr1_2:56854439-56854458 None:intergenic 10.0%
!!! TTTGTAAAAAAAAACATTTT+TGG + chr1_2:56857375-56857394 Msa0079110:three_prime_UTR 10.0%
!!! TTGTAATGTAATTTTTAATT+TGG + chr1_2:56857555-56857574 Msa0079110:three_prime_UTR 10.0%
!!! TGTAATGTAATTTTTAATTT+GGG + chr1_2:56857556-56857575 Msa0079110:three_prime_UTR 10.0%
!!! TAATAATCATTTTGGTAAAT+AGG - chr1_2:56848182-56848201 None:intergenic 15.0%
!!! TTTTTTTATATTCTTCTGAT+TGG + chr1_2:56848387-56848406 Msa0079110:intron 15.0%
!!! TCAATAATATCCTTTAAAAA+TGG + chr1_2:56849057-56849076 Msa0079110:intron 15.0%
!!! TAATGAAAGTATTTTACATT+TGG + chr1_2:56849117-56849136 Msa0079110:intron 15.0%
!! GTTCATTAATATTTCTTTAA+TGG + chr1_2:56849634-56849653 Msa0079110:intron 15.0%
!! ATTAATATTTCTTTAATGGT+TGG + chr1_2:56849638-56849657 Msa0079110:intron 15.0%
!!! GTTTTATTAATTTCTTTTTG+TGG + chr1_2:56849918-56849937 Msa0079110:intron 15.0%
!!! AAAAATTGATAATTGTAACA+TGG - chr1_2:56852201-56852220 None:intergenic 15.0%
!! ATATCTATATGTCTAAATAT+TGG - chr1_2:56852234-56852253 None:intergenic 15.0%
!! AGATAGTATTATAAAACAAA+AGG - chr1_2:56852572-56852591 None:intergenic 15.0%
!!! AAATAAAAAGTATATAGCAA+AGG - chr1_2:56852825-56852844 None:intergenic 15.0%
!! AAAGAAATTCTTTAATCTAT+TGG - chr1_2:56853515-56853534 None:intergenic 15.0%
!! GCATTTAATATAATCAATAA+TGG + chr1_2:56853726-56853745 Msa0079110:intron 15.0%
!!! ATTTTCAGCAATTTTTTATT+GGG + chr1_2:56853765-56853784 Msa0079110:intron 15.0%
!!! AACTTTTTAAATAAATGCAT+TGG + chr1_2:56853886-56853905 Msa0079110:intron 15.0%
!!! AAAGGTACAAAAATAAAAAA+GGG - chr1_2:56853975-56853994 None:intergenic 15.0%
!!! AAAAGGTACAAAAATAAAAA+AGG - chr1_2:56853976-56853995 None:intergenic 15.0%
!!! TTTTTATTTTTGTACCTTTT+TGG + chr1_2:56853976-56853995 Msa0079110:intron 15.0%
!! AATAAAATATATTAGACCAA+GGG - chr1_2:56855526-56855545 None:intergenic 15.0%
!! AAATAAAATATATTAGACCA+AGG - chr1_2:56855527-56855546 None:intergenic 15.0%
!!! TTTTTTTACAAAACATACAT+TGG - chr1_2:56857367-56857386 None:intergenic 15.0%
!! CAAATCAATTTATTAAATTG+TGG - chr1_2:56857686-56857705 None:intergenic 15.0%
!! CACAATTTAATAAATTGATT+TGG + chr1_2:56857684-56857703 Msa0079110:three_prime_UTR 15.0%
!!! TTTAATAAATTGATTTGGAT+TGG + chr1_2:56857689-56857708 Msa0079110:three_prime_UTR 15.0%
!! AACTAAAACAGATTGTAATT+TGG - chr1_2:56847562-56847581 None:intergenic 20.0%
!! TCTATTAACTACAACTAATA+AGG - chr1_2:56847921-56847940 None:intergenic 20.0%
!!! AATGAATAAGAGTATATTAG+TGG + chr1_2:56847963-56847982 Msa0079110:intron 20.0%
!! ACAAATAATCAATGTTTCAT+TGG + chr1_2:56847988-56848007 Msa0079110:intron 20.0%
!! GATATAATCCAATAATCAAT+AGG + chr1_2:56848224-56848243 Msa0079110:intron 20.0%
!! ACTCAAAATAATTCTTCAAT+TGG + chr1_2:56848324-56848343 Msa0079110:intron 20.0%
!! ATGCTTAAAGTGAAATTAAT+TGG - chr1_2:56848361-56848380 None:intergenic 20.0%
!!! TTAGTATAATCTCTAAGTTT+TGG - chr1_2:56848607-56848626 None:intergenic 20.0%
!! AAAACTTAGAGATTATACTA+AGG + chr1_2:56848606-56848625 Msa0079110:CDS 20.0%
!! AAACTTAGAGATTATACTAA+GGG + chr1_2:56848607-56848626 Msa0079110:CDS 20.0%
!! TAATATAATCCTGCAATAAA+TGG - chr1_2:56848853-56848872 None:intergenic 20.0%
!! TATTATCACAATCATGAATT+TGG - chr1_2:56848907-56848926 None:intergenic 20.0%
!!! ATAATATCCTTTAAAAATGG+TGG + chr1_2:56849060-56849079 Msa0079110:intron 20.0%
!!! AATTTTAATGTCTGAACTTA+TGG - chr1_2:56849423-56849442 None:intergenic 20.0%
!! CTTAGATCGTTTATATAAAA+TGG - chr1_2:56849500-56849519 None:intergenic 20.0%
!! TATGTAGTATGTAGTATAAT+TGG + chr1_2:56849749-56849768 Msa0079110:intron 20.0%
!! TTAATAAAACATTATTGGAG+AGG - chr1_2:56849908-56849927 None:intergenic 20.0%
!!! TCATTTATTATCTAAGATCA+TGG + chr1_2:56850298-56850317 Msa0079110:intron 20.0%
!!! CAGAAATTTTCTTTTATTCT+GGG + chr1_2:56850871-56850890 Msa0079110:intron 20.0%
!!! AGTATTTGGATATTTGTTTT+GGG - chr1_2:56850994-56851013 None:intergenic 20.0%
!!! AAGTATTTGGATATTTGTTT+TGG - chr1_2:56850995-56851014 None:intergenic 20.0%
!! TAGATAAAATTGTACATTCA+AGG - chr1_2:56851310-56851329 None:intergenic 20.0%
!!! AAAACGTTTTCACAATTTAA+AGG - chr1_2:56851509-56851528 None:intergenic 20.0%
!!! TTTCGTTATTTTTGTAACTT+TGG + chr1_2:56851526-56851545 Msa0079110:intron 20.0%
!!! TTCGTTATTTTTGTAACTTT+GGG + chr1_2:56851527-56851546 Msa0079110:intron 20.0%
!!! AAATAGAAATGTAAAAGTGT+AGG + chr1_2:56851567-56851586 Msa0079110:intron 20.0%
!! TTATATTGATACAATGAACA+AGG + chr1_2:56851649-56851668 Msa0079110:CDS 20.0%
!! ATATAGATATTGAGTGAAAT+GGG + chr1_2:56852244-56852263 Msa0079110:intron 20.0%
!! TACTTTGAATTATTTGCTTT+AGG + chr1_2:56852775-56852794 Msa0079110:intron 20.0%
!!! TTTGTGAAAGTTATATTTTG+TGG + chr1_2:56852842-56852861 Msa0079110:intron 20.0%
!!! TTAAACTTTTATCCTCTAAA+GGG - chr1_2:56852919-56852938 None:intergenic 20.0%
!!! TTTAAACTTTTATCCTCTAA+AGG - chr1_2:56852920-56852939 None:intergenic 20.0%
!! AATTATAAACGATGATTGAT+AGG + chr1_2:56852938-56852957 Msa0079110:intron 20.0%
!!! GTATAAATTTTGATTGAGTT+TGG - chr1_2:56853090-56853109 None:intergenic 20.0%
!! TGAAATAATGTCAAATCTTA+AGG - chr1_2:56853164-56853183 None:intergenic 20.0%
!! TTAAGATTTGACATTATTTC+AGG + chr1_2:56853163-56853182 Msa0079110:intron 20.0%
!!! ATGTTCTATGAAATTTTTTC+AGG + chr1_2:56853442-56853461 Msa0079110:CDS 20.0%
!! AAAATGAACTTTGTTAGATT+CGG + chr1_2:56853550-56853569 Msa0079110:intron 20.0%
!! TAATATAATCAATAATGGCA+TGG + chr1_2:56853731-56853750 Msa0079110:intron 20.0%
!! CAATAAAAAATTGCTGAAAA+TGG - chr1_2:56853766-56853785 None:intergenic 20.0%
!!! CATTTTCAGCAATTTTTTAT+TGG + chr1_2:56853764-56853783 Msa0079110:intron 20.0%
!! TGTTTGTTTATATACCAAAA+AGG - chr1_2:56853993-56854012 None:intergenic 20.0%
!!! AAGTTTTTCATTTTCAGATA+TGG + chr1_2:56854034-56854053 Msa0079110:intron 20.0%
!!! AGTTTTTCATTTTCAGATAT+GGG + chr1_2:56854035-56854054 Msa0079110:intron 20.0%
!! AGTTATAACATTGAAATTTC+TGG + chr1_2:56854831-56854850 Msa0079110:intron 20.0%
!! GTTATAACATTGAAATTTCT+GGG + chr1_2:56854832-56854851 Msa0079110:intron 20.0%
!! TTATAACATTGAAATTTCTG+GGG + chr1_2:56854833-56854852 Msa0079110:intron 20.0%
!! TTAAAGCTAATTCATAACTT+TGG + chr1_2:56855614-56855633 Msa0079110:intron 20.0%
!! TGCATTAGAAATTTACAAAA+AGG - chr1_2:56855854-56855873 None:intergenic 20.0%
!! AAATTAAAGTTCGTGTTTAA+TGG + chr1_2:56856347-56856366 Msa0079110:intron 20.0%
!!! TGTAATTTTCAAAAAGAAGA+TGG + chr1_2:56856697-56856716 Msa0079110:intron 20.0%
!!! GTAATTTTCAAAAAGAAGAT+GGG + chr1_2:56856698-56856717 Msa0079110:intron 20.0%
!!! TGTATTCATTGATTATTTAG+TGG + chr1_2:56856725-56856744 Msa0079110:intron 20.0%
!! TTAAATCATTAAAATGCTCT+TGG - chr1_2:56856845-56856864 None:intergenic 20.0%
!!! CGTTTTTTTTTTTTAACAAG+TGG - chr1_2:56856912-56856931 None:intergenic 20.0%
!!! ATTCAATATTTGCTAAACTA+TGG + chr1_2:56856959-56856978 Msa0079110:intron 20.0%
!!! TTCAATATTTGCTAAACTAT+GGG + chr1_2:56856960-56856979 Msa0079110:intron 20.0%
!! AAAACATACATTGGATATTA+TGG - chr1_2:56857358-56857377 None:intergenic 20.0%
!! AATTATACAGAATGCAAATA+CGG + chr1_2:56857514-56857533 Msa0079110:three_prime_UTR 20.0%
! AATTTCAGTGTAACAGAAAA+CGG - chr1_2:56847375-56847394 None:intergenic 25.0%
!!! ATTAGTTGTGTTGATTTCAA+CGG + chr1_2:56847868-56847887 Msa0079110:intron 25.0%
! CAAAATAATTCTTCAATTGG+AGG + chr1_2:56848327-56848346 Msa0079110:intron 25.0%
!! TAGCTAGAAGTATAATTGAA+AGG - chr1_2:56848508-56848527 None:intergenic 25.0%
! CTTAATAACTTACATATGTG+TGG - chr1_2:56848539-56848558 None:intergenic 25.0%
! GTTGCAAATATACTATCTAA+AGG + chr1_2:56848580-56848599 Msa0079110:CDS 25.0%
! TGATAATATCTTGTCACATA+TGG + chr1_2:56848919-56848938 Msa0079110:CDS 25.0%
!! ATTATTGACTAACTAAGAAC+TGG - chr1_2:56849045-56849064 None:intergenic 25.0%
!!! ACATTTACCACCATTTTTAA+AGG - chr1_2:56849070-56849089 None:intergenic 25.0%
!! AAATGTGTTTTCCTGATTTT+CGG + chr1_2:56849084-56849103 Msa0079110:intron 25.0%
!!! AAAGTATTTTACATTTGGAG+TGG + chr1_2:56849122-56849141 Msa0079110:intron 25.0%
! TTGTTTATTCGATCATTTGA+AGG + chr1_2:56849306-56849325 Msa0079110:intron 25.0%
! TCAATTAATATTACGCCAAA+AGG - chr1_2:56849550-56849569 None:intergenic 25.0%
!! AATTGATTATCAGTTTGTTC+TGG + chr1_2:56849564-56849583 Msa0079110:intron 25.0%
!!! TCTCTTGTTTGATTTTGTTT+AGG + chr1_2:56850412-56850431 Msa0079110:intron 25.0%
! GTTTAGGCATAATAATAGTA+TGG + chr1_2:56850428-56850447 Msa0079110:intron 25.0%
! AGAAAGAAATCTAACTAGAA+GGG - chr1_2:56850630-56850649 None:intergenic 25.0%
! CATCAATAACAGTATTAGTA+TGG + chr1_2:56850821-56850840 Msa0079110:intron 25.0%
!! GCAGAAATTTTCTTTTATTC+TGG + chr1_2:56850870-56850889 Msa0079110:intron 25.0%
! AAACTCACTTGTACTTTAAA+AGG - chr1_2:56851029-56851048 None:intergenic 25.0%
! ATTCTGAATTCCTATTGATA+AGG + chr1_2:56851098-56851117 Msa0079110:intron 25.0%
! TAGATAAAACTAATTGCTAG+AGG - chr1_2:56851126-56851145 None:intergenic 25.0%
! TGTTATTGAACTACTATTGA+AGG + chr1_2:56851375-56851394 Msa0079110:intron 25.0%
! TTATCCTAAATAATGCTATG+AGG + chr1_2:56851722-56851741 Msa0079110:intron 25.0%
!!! TTTTTTGAAAACAACTTTGC+TGG - chr1_2:56851846-56851865 None:intergenic 25.0%
! TAAGCTTACTATAAAAGACT+TGG + chr1_2:56851894-56851913 Msa0079110:intron 25.0%
! TATGTATTCAATCAAAGTGT+AGG + chr1_2:56851949-56851968 Msa0079110:intron 25.0%
!!! TGGTAGCATTTTAAAATCTT+TGG + chr1_2:56852041-56852060 Msa0079110:intron 25.0%
!!! TTCATTCTATGTTAATTTGC+TGG + chr1_2:56852089-56852108 Msa0079110:intron 25.0%
! CATATAGATATTGAGTGAAA+TGG + chr1_2:56852243-56852262 Msa0079110:intron 25.0%
! GGATAGGATTAATATATTGA+AGG + chr1_2:56852504-56852523 Msa0079110:CDS 25.0%
! ATATGGATATTTAATAGAGC+TGG - chr1_2:56853228-56853247 None:intergenic 25.0%
! TGTCAACATGTATTTAACTA+GGG - chr1_2:56853365-56853384 None:intergenic 25.0%
! ATGTCAACATGTATTTAACT+AGG - chr1_2:56853366-56853385 None:intergenic 25.0%
!! AATTTCTGTGAGGATTTTTA+TGG + chr1_2:56853409-56853428 Msa0079110:CDS 25.0%
!! ATTTCTGTGAGGATTTTTAT+GGG + chr1_2:56853410-56853429 Msa0079110:CDS 25.0%
!!! AATTTTTTCAGGTATTGTGA+TGG + chr1_2:56853453-56853472 Msa0079110:intron 25.0%
! AAATTTAAACTATGCCAACA+TGG + chr1_2:56853600-56853619 Msa0079110:intron 25.0%
! AATTTAAACTATGCCAACAT+GGG + chr1_2:56853601-56853620 Msa0079110:intron 25.0%
! TTAAAGACAAAATGATACAG+TGG - chr1_2:56854016-56854035 None:intergenic 25.0%
!! TTTTCATTGGAATTTCAAGA+GGG - chr1_2:56854369-56854388 None:intergenic 25.0%
! TCAGTTTCAAATTGTTTGAA+AGG - chr1_2:56854589-56854608 None:intergenic 25.0%
!!! AAAATGAGGAGATATTTTTG+GGG - chr1_2:56855157-56855176 None:intergenic 25.0%
!! CAAAATGAGGAGATATTTTT+GGG - chr1_2:56855158-56855177 None:intergenic 25.0%
! AATGTTCTCATAAAAAGTTG+AGG - chr1_2:56855251-56855270 None:intergenic 25.0%
!! TCAACTTTTTATGAGAACAT+TGG + chr1_2:56855250-56855269 Msa0079110:intron 25.0%
!!! TTAGCTTTAAATATGACTCA+AGG - chr1_2:56855604-56855623 None:intergenic 25.0%
! TAGAAATTTACAAAAAGGAG+TGG - chr1_2:56855849-56855868 None:intergenic 25.0%
! CTTGATAAGTAAATCATCAA+TGG - chr1_2:56855931-56855950 None:intergenic 25.0%
!!! TATCAATTTTGGAATATCCA+GGG + chr1_2:56856177-56856196 Msa0079110:intron 25.0%
!! TTAAGACTGAAACTCTTTTT+CGG + chr1_2:56856503-56856522 Msa0079110:intron 25.0%
! AGTTCTGTGTTAAATTAAGT+GGG + chr1_2:56856590-56856609 Msa0079110:intron 25.0%
! TGATTTAATCAAGTTTGTCA+AGG + chr1_2:56856857-56856876 Msa0079110:CDS 25.0%
! TACATTGGATATTATGGATT+TGG - chr1_2:56857352-56857371 None:intergenic 25.0%
!!! TAAGATTTTTTTGCTCGTTT+TGG + chr1_2:56857400-56857419 Msa0079110:three_prime_UTR 25.0%
!!! AAGATTTTTTTGCTCGTTTT+GGG + chr1_2:56857401-56857420 Msa0079110:three_prime_UTR 25.0%
! ATTATACAGAATGCAAATAC+GGG + chr1_2:56857515-56857534 Msa0079110:three_prime_UTR 25.0%
CATGTGATTTGAAGAAGAAA+AGG - chr1_2:56847244-56847263 None:intergenic 30.0%
CAATTTCTACACAAACAAGA+TGG + chr1_2:56847306-56847325 Msa0079110:exon 30.0%
TATATGTACCATTGTGTTTG+AGG - chr1_2:56847341-56847360 None:intergenic 30.0%
ACCATTGAAGAAGATCTAAA+CGG + chr1_2:56847506-56847525 Msa0079110:CDS 30.0%
CAGTGATGATATATGTTAGA+TGG + chr1_2:56847641-56847660 Msa0079110:intron 30.0%
ATGTTTCATTGGTATTAACC+TGG + chr1_2:56847999-56848018 Msa0079110:intron 30.0%
! AATTCATTGGTATTCTGAAG+TGG + chr1_2:56848095-56848114 Msa0079110:intron 30.0%
AGACACTTATAATGAGATGA+GGG + chr1_2:56848152-56848171 Msa0079110:intron 30.0%
! TACGCGGTTAATAATCATTT+TGG - chr1_2:56848190-56848209 None:intergenic 30.0%
TGTTTCTCAATTGAAGAGTT+TGG + chr1_2:56848266-56848285 Msa0079110:intron 30.0%
TTCTTTATGTGCATAGTCAA+AGG + chr1_2:56848446-56848465 Msa0079110:intron 30.0%
! AGAAGTATAATTGAAAGGCA+GGG - chr1_2:56848503-56848522 None:intergenic 30.0%
! TAGAAGTATAATTGAAAGGC+AGG - chr1_2:56848504-56848523 None:intergenic 30.0%
CTAGCAAAGAAGAAACAAAA+TGG - chr1_2:56848712-56848731 None:intergenic 30.0%
AACAAAAATTGTCGAGATTG+TGG - chr1_2:56849150-56849169 None:intergenic 30.0%
ATATACTAACAGATCCTCAA+AGG - chr1_2:56849262-56849281 None:intergenic 30.0%
! TTCATAATTGTAGCACCTTT+TGG + chr1_2:56849532-56849551 Msa0079110:intron 30.0%
GGAAATCAAATTGCATCAAA+AGG + chr1_2:56849585-56849604 Msa0079110:intron 30.0%
TTCTATTCATGTTTGGATGA+GGG + chr1_2:56849663-56849682 Msa0079110:intron 30.0%
ACAGAAAAACTTAATTCGCT+GGG - chr1_2:56849710-56849729 None:intergenic 30.0%
ATACTACATATAACACATGC+AGG - chr1_2:56849739-56849758 None:intergenic 30.0%
!!! GTCTTGTTTTTTCTCTCAAT+AGG + chr1_2:56849771-56849790 Msa0079110:intron 30.0%
!!! TTGTTTTTTCTCTCAATAGG+TGG + chr1_2:56849774-56849793 Msa0079110:intron 30.0%
TTTGTTGAGATTTGAGAGTT+CGG + chr1_2:56849973-56849992 Msa0079110:intron 30.0%
AAACCTTATAAGTACTACCT+AGG - chr1_2:56850017-56850036 None:intergenic 30.0%
TAGGTAGTACTTATAAGGTT+TGG + chr1_2:56850016-56850035 Msa0079110:intron 30.0%
!! ACCTTATAAGTCAGTTTTGT+GGG + chr1_2:56850048-56850067 Msa0079110:intron 30.0%
TACCTTAAATTCAGGACTTA+GGG - chr1_2:56850084-56850103 None:intergenic 30.0%
ATACCTTAAATTCAGGACTT+AGG - chr1_2:56850085-56850104 None:intergenic 30.0%
GCAAACAATACCTTAAATTC+AGG - chr1_2:56850092-56850111 None:intergenic 30.0%
TCCTTAGAGAATCAACTAAA+AGG + chr1_2:56850349-56850368 Msa0079110:intron 30.0%
!! TCCTTTTAGTTGATTCTCTA+AGG - chr1_2:56850353-56850372 None:intergenic 30.0%
!!! ATTGACAGTTTTATTGTTGC+TGG + chr1_2:56850458-56850477 Msa0079110:intron 30.0%
GAGAAAGAAATCTAACTAGA+AGG - chr1_2:56850631-56850650 None:intergenic 30.0%
GTTAGATTTCTTTCTCACTT+TGG + chr1_2:56850635-56850654 Msa0079110:intron 30.0%
! TTTAGAATGCTATAGCTTGA+TGG + chr1_2:56851060-56851079 Msa0079110:intron 30.0%
!!! CTATTCATTGCTATTTTGAC+TGG + chr1_2:56851243-56851262 Msa0079110:intron 30.0%
! ACGTTTTCACAATTTAAAGG+TGG - chr1_2:56851506-56851525 None:intergenic 30.0%
GTATGTTGTTAACTTTCTCA+AGG + chr1_2:56851589-56851608 Msa0079110:CDS 30.0%
!!! AAAACTAGCTTTTTGTCAAC+AGG - chr1_2:56851922-56851941 None:intergenic 30.0%
ACATAGAATGAAAGTAAGTC+AGG - chr1_2:56852081-56852100 None:intergenic 30.0%
! AATGGGTATAATGATTTTGC+AGG + chr1_2:56852261-56852280 Msa0079110:intron 30.0%
! ATGGGTATAATGATTTTGCA+GGG + chr1_2:56852262-56852281 Msa0079110:intron 30.0%
GCAACATCCTATGATTTAAT+TGG + chr1_2:56852400-56852419 Msa0079110:CDS 30.0%
CTCTACACCAATTAAATCAT+AGG - chr1_2:56852410-56852429 None:intergenic 30.0%
! ATAGTTTTTCCCTTTTTCCT+AGG - chr1_2:56852540-56852559 None:intergenic 30.0%
! AAGTTATATTTTGTGGTCCT+TGG + chr1_2:56852849-56852868 Msa0079110:intron 30.0%
!! TTCAACTGTTGATTCTTCAA+TGG + chr1_2:56853031-56853050 Msa0079110:intron 30.0%
ATTTCAGGAAATTGATGAAC+CGG + chr1_2:56853178-56853197 Msa0079110:intron 30.0%
AAATTATATCTGCAGATGCA+AGG - chr1_2:56853394-56853413 None:intergenic 30.0%
! TTTCTGTGAGGATTTTTATG+GGG + chr1_2:56853411-56853430 Msa0079110:CDS 30.0%
!!! TATGCCTTTTTGGTTTATAC+AGG + chr1_2:56854083-56854102 Msa0079110:intron 30.0%
AATTCTTGGAACAAGATGAT+GGG - chr1_2:56854333-56854352 None:intergenic 30.0%
AAATTCTTGGAACAAGATGA+TGG - chr1_2:56854334-56854353 None:intergenic 30.0%
! GTTTTCATTGGAATTTCAAG+AGG - chr1_2:56854370-56854389 None:intergenic 30.0%
CTGAAACATAAAATGCAGAT+TGG - chr1_2:56854502-56854521 None:intergenic 30.0%
TATTTCAGCTCATTATGTCT+CGG + chr1_2:56854619-56854638 Msa0079110:intron 30.0%
TCTAAATAAGAATCCAAGCA+TGG - chr1_2:56854654-56854673 None:intergenic 30.0%
! CTTGGATTCTTATTTAGACA+AGG + chr1_2:56854656-56854675 Msa0079110:CDS 30.0%
ATAGTTAGAATCCTCAAGAT+TGG + chr1_2:56854977-56854996 Msa0079110:intron 30.0%
TAGTTAGAATCCTCAAGATT+GGG + chr1_2:56854978-56854997 Msa0079110:intron 30.0%
! CCAAAATGAGGAGATATTTT+TGG - chr1_2:56855159-56855178 None:intergenic 30.0%
! CCAAAAATATCTCCTCATTT+TGG + chr1_2:56855156-56855175 Msa0079110:intron 30.0%
! AGAATTTGATGACCAAAATG+AGG - chr1_2:56855171-56855190 None:intergenic 30.0%
! AAGTTGAGGTTAGTCATATT+GGG - chr1_2:56855237-56855256 None:intergenic 30.0%
! AAAGTTGAGGTTAGTCATAT+TGG - chr1_2:56855238-56855257 None:intergenic 30.0%
TATGACTTCTATAGGTAGAA+CGG - chr1_2:56855396-56855415 None:intergenic 30.0%
TAGTCATCTATGACTTCTAT+AGG - chr1_2:56855404-56855423 None:intergenic 30.0%
TATAGAAGTCATAGATGACT+AGG + chr1_2:56855403-56855422 Msa0079110:intron 30.0%
TTTCGTCATTGAACAATAGA+AGG - chr1_2:56855567-56855586 None:intergenic 30.0%
CTATTGTTCAATGACGAAAA+TGG + chr1_2:56855568-56855587 Msa0079110:intron 30.0%
!! GTTTTGTTCAAGTACTTTCT+AGG - chr1_2:56856102-56856121 None:intergenic 30.0%
AAAACTCCATTTCAAATTGC+TGG + chr1_2:56856117-56856136 Msa0079110:intron 30.0%
!!! ATAGCTTGCTCTATCAATTT+TGG + chr1_2:56856166-56856185 Msa0079110:intron 30.0%
!!! CTATCAATTTTGGAATATCC+AGG + chr1_2:56856176-56856195 Msa0079110:intron 30.0%
CAAAATTCAAATGCACTTTG+AGG + chr1_2:56856254-56856273 Msa0079110:CDS 30.0%
!! CTTTAATTTGCAACAAAACC+AGG - chr1_2:56856336-56856355 None:intergenic 30.0%
!! TTGCTATTTCTTCACATTGT+TGG + chr1_2:56856406-56856425 Msa0079110:intron 30.0%
GAAACTAAATTTCGACTAAG+TGG - chr1_2:56856455-56856474 None:intergenic 30.0%
TAATTCATTTCCTTCAGATC+AGG - chr1_2:56856548-56856567 None:intergenic 30.0%
GAATTAGAAATAAGACTAGC+TGG + chr1_2:56856562-56856581 Msa0079110:intron 30.0%
GAGTTCTGTGTTAAATTAAG+TGG + chr1_2:56856589-56856608 Msa0079110:intron 30.0%
GTTCTGTGTTAAATTAAGTG+GGG + chr1_2:56856591-56856610 Msa0079110:intron 30.0%
TTCTGTGTTAAATTAAGTGG+GGG + chr1_2:56856592-56856611 Msa0079110:intron 30.0%
!! AATAGTTTGTTATCAGCAAG+TGG - chr1_2:56856631-56856650 None:intergenic 30.0%
ATTCACTTGTTTCCTTTAGA+TGG - chr1_2:56856668-56856687 None:intergenic 30.0%
! ATTTTTCTTTCAATCCTTGC+AGG + chr1_2:56856809-56856828 Msa0079110:intron 30.0%
ATGTAAATAAGATGCGACAT+TGG - chr1_2:56856941-56856960 None:intergenic 30.0%
TGATAAACCTATAACTGTTG+CGG + chr1_2:56857028-56857047 Msa0079110:CDS 30.0%
!!! TCTTTCAGCAATTTTTTGTG+CGG + chr1_2:56857128-56857147 Msa0079110:CDS 30.0%
CGTATAGTAAAGTAGCAATT+GGG - chr1_2:56857180-56857199 None:intergenic 30.0%
TCGTATAGTAAAGTAGCAAT+TGG - chr1_2:56857181-56857200 None:intergenic 30.0%
CTCATACATGATTGAAGATA+TGG - chr1_2:56857264-56857283 None:intergenic 30.0%
CTTCAATCATGTATGAGATT+AGG + chr1_2:56857267-56857286 Msa0079110:CDS 30.0%
ATGAGATTAGGAAATATTCG+AGG + chr1_2:56857279-56857298 Msa0079110:CDS 30.0%
AAGAAGTCATAGTTATCTGT+TGG + chr1_2:56857318-56857337 Msa0079110:three_prime_UTR 30.0%
TACATCTATAGTTACCGAAT+TGG + chr1_2:56857424-56857443 Msa0079110:three_prime_UTR 30.0%
ATTCTTCAACAATGCCAATT+CGG - chr1_2:56857441-56857460 None:intergenic 30.0%
TTGCATTCTGTATAATTCCA+TGG - chr1_2:56857511-56857530 None:intergenic 30.0%
! TTTGAAGAAGAAAAGGTGTG+AGG - chr1_2:56847237-56847256 None:intergenic 35.0%
AGTGTAACAGAAAACGGTTA+TGG - chr1_2:56847369-56847388 None:intergenic 35.0%
CCATTGAAGAAGATCTAAAC+GGG + chr1_2:56847507-56847526 Msa0079110:CDS 35.0%
! TATGTTAGATGGACTTCAAC+AGG + chr1_2:56847652-56847671 Msa0079110:intron 35.0%
!!! TTTTCGGTTGTAGCTTTGTA+AGG + chr1_2:56847802-56847821 Msa0079110:intron 35.0%
TTTCATTGGTATTAACCTGG+TGG + chr1_2:56848002-56848021 Msa0079110:intron 35.0%
!! TTCTGAAGTGGCAATTAACT+TGG + chr1_2:56848107-56848126 Msa0079110:intron 35.0%
GAGACACTTATAATGAGATG+AGG + chr1_2:56848151-56848170 Msa0079110:intron 35.0%
TCGAATTGTTCTCATATACG+CGG - chr1_2:56848206-56848225 None:intergenic 35.0%
! CAAGGTCTCCTATTGATTAT+TGG - chr1_2:56848235-56848254 None:intergenic 35.0%
!! AATTGAAGAGTTTGGTGTAC+TGG + chr1_2:56848274-56848293 Msa0079110:intron 35.0%
!! ATTGAAGAGTTTGGTGTACT+GGG + chr1_2:56848275-56848294 Msa0079110:intron 35.0%
!! CTTCTGATTGGCTTCATTTA+AGG + chr1_2:56848399-56848418 Msa0079110:intron 35.0%
! TAAGTTGTTGTTCTCTGTGT+AGG + chr1_2:56848555-56848574 Msa0079110:intron 35.0%
AAAGAAGAAACAAAATGGCG+TGG - chr1_2:56848707-56848726 None:intergenic 35.0%
! TAAGTGGATTTCAGGTATGT+TGG + chr1_2:56848951-56848970 Msa0079110:intron 35.0%
TGACTAACTAAGAACTGGTT+GGG - chr1_2:56849040-56849059 None:intergenic 35.0%
TTGACTAACTAAGAACTGGT+TGG - chr1_2:56849041-56849060 None:intergenic 35.0%
TAGACACTTCATTGTTGCAA+GGG - chr1_2:56849232-56849251 None:intergenic 35.0%
ATAGACACTTCATTGTTGCA+AGG - chr1_2:56849233-56849252 None:intergenic 35.0%
TTTATTTACCAGGCTGAGAT+TGG + chr1_2:56849395-56849414 Msa0079110:intron 35.0%
AATTCTGCAAGAGAAGTCTA+TGG + chr1_2:56849439-56849458 Msa0079110:CDS 35.0%
CAAGAGAAGTCTATGGATAT+GGG + chr1_2:56849446-56849465 Msa0079110:CDS 35.0%
GTTGGACTTCTATTCATGTT+TGG + chr1_2:56849656-56849675 Msa0079110:intron 35.0%
CTTCTATTCATGTTTGGATG+AGG + chr1_2:56849662-56849681 Msa0079110:intron 35.0%
TCTATTCATGTTTGGATGAG+GGG + chr1_2:56849664-56849683 Msa0079110:intron 35.0%
GACAGAAAAACTTAATTCGC+TGG - chr1_2:56849711-56849730 None:intergenic 35.0%
ATAATACCTCTCCATCAACA+AGG - chr1_2:56849861-56849880 None:intergenic 35.0%
! CACCTTATAAGTCAGTTTTG+TGG + chr1_2:56850047-56850066 Msa0079110:intron 35.0%
! ACCCACAAAACTGACTTATA+AGG - chr1_2:56850052-56850071 None:intergenic 35.0%
CATAACAAATATTGCAGTGC+CGG + chr1_2:56850231-56850250 Msa0079110:intron 35.0%
GTGTTTATAATGTTGTGTGC+AGG - chr1_2:56850275-56850294 None:intergenic 35.0%
GCACACAACATTATAAACAC+TGG + chr1_2:56850275-56850294 Msa0079110:intron 35.0%
GCATTTGTAAACTAGTGTCT+TGG + chr1_2:56850320-56850339 Msa0079110:intron 35.0%
!! TTGGTCTTCTTTGGCATTTT+AGG + chr1_2:56850495-56850514 Msa0079110:intron 35.0%
CTAGAAGGGAATATACTAGT+AGG - chr1_2:56850616-56850635 None:intergenic 35.0%
GAAACTGAAGTTTGTAGAAG+TGG + chr1_2:56850710-56850729 Msa0079110:CDS 35.0%
TGGATGGATAACAGATGATA+TGG - chr1_2:56850922-56850941 None:intergenic 35.0%
! GGACACTTTGTTGAAGTATT+TGG - chr1_2:56851008-56851027 None:intergenic 35.0%
ATTTAAAGGTGGTTAACGCA+AGG - chr1_2:56851495-56851514 None:intergenic 35.0%
GTTAACTTTCTCAAGGAACA+TGG + chr1_2:56851596-56851615 Msa0079110:CDS 35.0%
CCATCCTCATAGCATTATTT+AGG - chr1_2:56851729-56851748 None:intergenic 35.0%
CCTAAATAATGCTATGAGGA+TGG + chr1_2:56851726-56851745 Msa0079110:intron 35.0%
AAACAACTTTGCTGGCATAT+GGG - chr1_2:56851838-56851857 None:intergenic 35.0%
AAAACAACTTTGCTGGCATA+TGG - chr1_2:56851839-56851858 None:intergenic 35.0%
!! AATCTTTGGTAGCTTTGAGT+TGG + chr1_2:56852055-56852074 Msa0079110:intron 35.0%
!! TGTTAATTTGCTGGCTTTCA+CGG + chr1_2:56852098-56852117 Msa0079110:intron 35.0%
GAAAATAGAAGTCTTCCATG+TGG - chr1_2:56852135-56852154 None:intergenic 35.0%
TGTAATATGTATGAGCTGAG+TGG + chr1_2:56852157-56852176 Msa0079110:intron 35.0%
GTAATATGTATGAGCTGAGT+GGG + chr1_2:56852158-56852177 Msa0079110:intron 35.0%
TTGTAACATGGATCAGTGAT+TGG - chr1_2:56852189-56852208 None:intergenic 35.0%
TATGACTCAACCTAGGAAAA+AGG + chr1_2:56852527-56852546 Msa0079110:intron 35.0%
ATGACTCAACCTAGGAAAAA+GGG + chr1_2:56852528-56852547 Msa0079110:intron 35.0%
AATACTATCTGAATTGACCG+AGG + chr1_2:56852582-56852601 Msa0079110:intron 35.0%
AAAGAAATACATGGACTCCT+CGG - chr1_2:56852602-56852621 None:intergenic 35.0%
GTCCATGTATTTCTTTCCAT+TGG + chr1_2:56852606-56852625 Msa0079110:intron 35.0%
CACCAATGGAAAGAAATACA+TGG - chr1_2:56852611-56852630 None:intergenic 35.0%
AAATGAACTACTGACACCAA+TGG - chr1_2:56852625-56852644 None:intergenic 35.0%
! TAGTTCATTTTGAGCAGTGA+AGG + chr1_2:56852635-56852654 Msa0079110:intron 35.0%
AATTATATTTCCTGCCCCTA+GGG + chr1_2:56852716-56852735 Msa0079110:intron 35.0%
CAGTCACATTAACAATACCA+AGG - chr1_2:56852869-56852888 None:intergenic 35.0%
CTTGGTATTGTTAATGTGAC+TGG + chr1_2:56852867-56852886 Msa0079110:intron 35.0%
!! ACTGTTGATTCTTCAATGGA+AGG + chr1_2:56853035-56853054 Msa0079110:intron 35.0%
! TTTTACACTCTTTACTTGCG+AGG + chr1_2:56853062-56853081 Msa0079110:intron 35.0%
ATTGTGTAGTCATTGGGTTA+TGG + chr1_2:56853138-56853157 Msa0079110:intron 35.0%
ATCCATATGAAGTTCTGTTC+AGG + chr1_2:56853240-56853259 Msa0079110:CDS 35.0%
CTGCAGATATAATTTCTGTG+AGG + chr1_2:56853399-56853418 Msa0079110:intron 35.0%
!!! ACCATTTTTTGTTCCCATGT+TGG - chr1_2:56853617-56853636 None:intergenic 35.0%
AAATGCTAATGAGTTCCCTA+AGG + chr1_2:56853788-56853807 Msa0079110:intron 35.0%
AATGCTAATGAGTTCCCTAA+GGG + chr1_2:56853789-56853808 Msa0079110:intron 35.0%
AATATGCGTATTCAGTGCAT+TGG + chr1_2:56853849-56853868 Msa0079110:intron 35.0%
! TCATTTTCAGATATGGGTTC+AGG + chr1_2:56854041-56854060 Msa0079110:intron 35.0%
!! TATGGGTTCAGGTTTTGTAT+AGG + chr1_2:56854052-56854071 Msa0079110:intron 35.0%
! GGTCAATTGATATGCCTTTT+TGG + chr1_2:56854073-56854092 Msa0079110:intron 35.0%
AGGACCTGTATAAACCAAAA+AGG - chr1_2:56854090-56854109 None:intergenic 35.0%
! TTGGTTTATACAGGTCCTTT+TGG + chr1_2:56854092-56854111 Msa0079110:intron 35.0%
! AACATTCTGACTTGTAAGAG+TGG + chr1_2:56854208-56854227 Msa0079110:intron 35.0%
AAACCACATTGATGCTATTG+CGG + chr1_2:56854267-56854286 Msa0079110:intron 35.0%
GTTTGCATTACACCTTCTTT+AGG - chr1_2:56854293-56854312 None:intergenic 35.0%
GTGGCTATGAATCAAATTCT+TGG - chr1_2:56854347-56854366 None:intergenic 35.0%
GGTAATTGCTTCTCAAGAAA+TGG - chr1_2:56854418-56854437 None:intergenic 35.0%
CCAACATTCACATTACTGTT+TGG - chr1_2:56854537-56854556 None:intergenic 35.0%
CCAAACAGTAATGTGAATGT+TGG + chr1_2:56854534-56854553 Msa0079110:intron 35.0%
AGAACCCTACAAGAATTGTA+GGG - chr1_2:56854801-56854820 None:intergenic 35.0%
!! CATTGAAATTTCTGGGGTAT+CGG + chr1_2:56854839-56854858 Msa0079110:intron 35.0%
ATCTGTACAACCAACATACA+TGG + chr1_2:56854949-56854968 Msa0079110:intron 35.0%
TCTGTACAACCAACATACAT+GGG + chr1_2:56854950-56854969 Msa0079110:intron 35.0%
ACTATGTTTCCCATGTATGT+TGG - chr1_2:56854962-56854981 None:intergenic 35.0%
GATGCTTATTCACTAGTTCA+TGG - chr1_2:56855090-56855109 None:intergenic 35.0%
GAAAAATGAAACCCGTAATG+AGG - chr1_2:56855213-56855232 None:intergenic 35.0%
! TTTTTATGAGAACATTGGCG+AGG + chr1_2:56855255-56855274 Msa0079110:intron 35.0%
! TTTTATGAGAACATTGGCGA+GGG + chr1_2:56855256-56855275 Msa0079110:intron 35.0%
!! TTTAACATGTCAGGTGTTGA+TGG - chr1_2:56855330-56855349 None:intergenic 35.0%
GACTAGACATTTAACATGTC+AGG - chr1_2:56855339-56855358 None:intergenic 35.0%
GAATTTCCATGGAGCAAAAA+TGG - chr1_2:56855361-56855380 None:intergenic 35.0%
CAATTCTCTTACATTTCCCT+TGG + chr1_2:56855507-56855526 Msa0079110:intron 35.0%
AGCTAATTCATAACTTTGGC+AGG + chr1_2:56855618-56855637 Msa0079110:intron 35.0%
ATGCAAATGTGAAGACATTG+TGG + chr1_2:56855704-56855723 Msa0079110:CDS 35.0%
TGCAAATGTGAAGACATTGT+GGG + chr1_2:56855705-56855724 Msa0079110:CDS 35.0%
TTCATCCTCATTATGTCATG+AGG + chr1_2:56855737-56855756 Msa0079110:CDS 35.0%
ATCCACTTAAACTCTGAGTT+TGG + chr1_2:56855787-56855806 Msa0079110:CDS 35.0%
TCCACTTAAACTCTGAGTTT+GGG + chr1_2:56855788-56855807 Msa0079110:CDS 35.0%
AAAAGGAGTGGATGATTGAT+AGG - chr1_2:56855837-56855856 None:intergenic 35.0%
AGCTGCAATTAGTAAACAGA+TGG - chr1_2:56855879-56855898 None:intergenic 35.0%
!!! TTTTGGCTTTGTGAAGTTCT+TGG - chr1_2:56855958-56855977 None:intergenic 35.0%
CACAAAGCCAAAACTACAAA+CGG + chr1_2:56855965-56855984 Msa0079110:CDS 35.0%
! AGAAACACCGTTTGTAGTTT+TGG - chr1_2:56855975-56855994 None:intergenic 35.0%
!! TATGACAATCGCTGTTTTGA+AGG + chr1_2:56856010-56856029 Msa0079110:CDS 35.0%
AGCAAAAATTGAAGTTACCC+TGG - chr1_2:56856197-56856216 None:intergenic 35.0%
! ATTTGAATTTTGCCAGCTTC+AGG - chr1_2:56856246-56856265 None:intergenic 35.0%
GAGCAATACAGCATTATTTG+TGG + chr1_2:56856287-56856306 Msa0079110:CDS 35.0%
ATGACAATCACAACGCAAAT+TGG - chr1_2:56856483-56856502 None:intergenic 35.0%
!! TTCGGAAATTTTAGTGCTGT+CGG + chr1_2:56856521-56856540 Msa0079110:intron 35.0%
GAACTATGATCTCCATCTAA+AGG + chr1_2:56856653-56856672 Msa0079110:intron 35.0%
TGTCATCGCTTTATACTTAC+AGG - chr1_2:56856889-56856908 None:intergenic 35.0%
TGCATGAAATTTATCAGCTG+AGG + chr1_2:56856989-56857008 Msa0079110:intron 35.0%
GCAACAGTTATAGGTTTATC+AGG - chr1_2:56857029-56857048 None:intergenic 35.0%
GAATTGGCATTGTTGAAGAA+TGG + chr1_2:56857440-56857459 Msa0079110:three_prime_UTR 35.0%
TGCAACAAATATCAAGTCCA+TGG + chr1_2:56857491-56857510 Msa0079110:three_prime_UTR 35.0%
!!! TACTTTTTTCCTGTTGAGCA+TGG + chr1_2:56857594-56857613 Msa0079110:three_prime_UTR 35.0%
ATTCCAGCAACTAAGATCTT+AGG + chr1_2:56857618-56857637 Msa0079110:three_prime_UTR 35.0%
TTCCAGCAACTAAGATCTTA+GGG + chr1_2:56857619-56857638 Msa0079110:three_prime_UTR 35.0%
CCATTGACGTGATGAGATTT+GGG - chr1_2:56847181-56847200 None:intergenic 40.0%
CCTAGATCAAATGCACTAGA+AGG - chr1_2:56847467-56847486 None:intergenic 40.0%
CCTTCTAGTGCATTTGATCT+AGG + chr1_2:56847464-56847483 Msa0079110:CDS 40.0%
!! TTTGATCTAGGAGCATTCGT+TGG + chr1_2:56847476-56847495 Msa0079110:CDS 40.0%
CCCGTTTAGATCTTCTTCAA+TGG - chr1_2:56847510-56847529 None:intergenic 40.0%
TGTGCGCGATTCTTAAGAAA+AGG + chr1_2:56847845-56847864 Msa0079110:intron 40.0%
AGAAACAAAACCGACAAGCA+AGG - chr1_2:56848253-56848272 None:intergenic 40.0%
! TGAGAATGATTTGCGCAAAG+TGG + chr1_2:56848633-56848652 Msa0079110:CDS 40.0%
AGTGGAGTTGGATTCAATTC+AGG + chr1_2:56848651-56848670 Msa0079110:CDS 40.0%
GTAGCGATGATCTTACATGT+AGG + chr1_2:56848771-56848790 Msa0079110:intron 40.0%
! ACAACTCTGCCATTTATTGC+AGG + chr1_2:56848841-56848860 Msa0079110:intron 40.0%
CATATGGAAACTCTGCTAAG+TGG + chr1_2:56848935-56848954 Msa0079110:CDS 40.0%
! AACTCTGCTAAGTGGATTTC+AGG + chr1_2:56848943-56848962 Msa0079110:CDS 40.0%
ATCTGTCTTGTCCGAAAATC+AGG - chr1_2:56849098-56849117 None:intergenic 40.0%
AGACACTTCATTGTTGCAAG+GGG - chr1_2:56849231-56849250 None:intergenic 40.0%
GTGTCTATTTACCACCTTTG+AGG + chr1_2:56849245-56849264 Msa0079110:intron 40.0%
TACTAACAGATCCTCAAAGG+TGG - chr1_2:56849259-56849278 None:intergenic 40.0%
GCAAGAGAAGTCTATGGATA+TGG + chr1_2:56849445-56849464 Msa0079110:CDS 40.0%
AGTCTATGGATATGGGTTTG+AGG + chr1_2:56849453-56849472 Msa0079110:CDS 40.0%
! TTTGAGGCTTAAGAATCGCA+AGG + chr1_2:56849469-56849488 Msa0079110:CDS 40.0%
CATTATTATCCCTCCGAGAA+TGG + chr1_2:56849828-56849847 Msa0079110:CDS 40.0%
!! TTCGGCATTGACTAGAGATA+GGG + chr1_2:56849991-56850010 Msa0079110:intron 40.0%
GTCCCTAAGTCCTGAATTTA+AGG + chr1_2:56850079-56850098 Msa0079110:intron 40.0%
! TTTGAAACAAGGGTCTGATC+TGG + chr1_2:56850147-56850166 Msa0079110:intron 40.0%
TGTAAACTAGTGTCTTGGCT+TGG + chr1_2:56850325-56850344 Msa0079110:intron 40.0%
GTAAACTAGTGTCTTGGCTT+GGG + chr1_2:56850326-56850345 Msa0079110:intron 40.0%
!! TAAAAGGAGTCTAGCTCTTC+TGG + chr1_2:56850365-56850384 Msa0079110:intron 40.0%
! TGTCTCTTCTTGGTCTTCTT+TGG + chr1_2:56850486-56850505 Msa0079110:intron 40.0%
! GTTGACATGCTTTTACATCG+AGG + chr1_2:56850523-56850542 Msa0079110:intron 40.0%
CAGCATGCATGTCAAGTATT+GGG - chr1_2:56850576-56850595 None:intergenic 40.0%
! TCTCACTTTGGATGCTTTTC+AGG + chr1_2:56850647-56850666 Msa0079110:intron 40.0%
GTTTGTAGAAGTGGACACAA+TGG + chr1_2:56850719-56850738 Msa0079110:CDS 40.0%
TGAAGTCAAATACCTGCAGA+TGG - chr1_2:56850942-56850961 None:intergenic 40.0%
GCTAGAGGAACCTTATCAAT+AGG - chr1_2:56851111-56851130 None:intergenic 40.0%
AACTCAACACCAGCAAACAT+GGG - chr1_2:56851161-56851180 None:intergenic 40.0%
AAACTCAACACCAGCAAACA+TGG - chr1_2:56851162-56851181 None:intergenic 40.0%
GCTAACAAGAGAACTAGTGA+AGG + chr1_2:56851444-56851463 Msa0079110:intron 40.0%
! TAACGCAAGGAGGTATACAA+TGG - chr1_2:56851482-56851501 None:intergenic 40.0%
!!! GGGAAATGCATTTTTAGTGG+GGG - chr1_2:56851992-56852011 None:intergenic 40.0%
!!! GGGGAAATGCATTTTTAGTG+GGG - chr1_2:56851993-56852012 None:intergenic 40.0%
!!! GGGGGAAATGCATTTTTAGT+GGG - chr1_2:56851994-56852013 None:intergenic 40.0%
TCGCTATAAACTTCACTTCG+GGG - chr1_2:56852013-56852032 None:intergenic 40.0%
CTCGCTATAAACTTCACTTC+GGG - chr1_2:56852014-56852033 None:intergenic 40.0%
CCTCGCTATAAACTTCACTT+CGG - chr1_2:56852015-56852034 None:intergenic 40.0%
AGTTTATAGCGAGGTGTGAA+TGG + chr1_2:56852021-56852040 Msa0079110:intron 40.0%
ACGGTTAATGATGAACCACA+TGG + chr1_2:56852117-56852136 Msa0079110:intron 40.0%
! TGCACATATAGAGGAGCATA+AGG - chr1_2:56852319-56852338 None:intergenic 40.0%
TTATGCTCCTCTATATGTGC+AGG + chr1_2:56852318-56852337 Msa0079110:intron 40.0%
CTAAGAACCTGCACATATAG+AGG - chr1_2:56852328-56852347 None:intergenic 40.0%
CCAATGCTTGTATGTAAGCA+CGG - chr1_2:56852360-56852379 None:intergenic 40.0%
! AGCATTGGAGAAACTGCAAT+TGG + chr1_2:56852372-56852391 Msa0079110:CDS 40.0%
! ACAGCAGATCGATTCTTTAG+CGG - chr1_2:56852472-56852491 None:intergenic 40.0%
!!! GATCTGCTGTTTTTGCTCTT+GGG + chr1_2:56852482-56852501 Msa0079110:CDS 40.0%
!!! ATCTGCTGTTTTTGCTCTTG+GGG + chr1_2:56852483-56852502 Msa0079110:CDS 40.0%
! TTGAAGGTATGACTCAACCT+AGG + chr1_2:56852520-56852539 Msa0079110:intron 40.0%
! AGTGAAGGTTAGTCAAGACT+AGG + chr1_2:56852650-56852669 Msa0079110:intron 40.0%
GAATTATATTTCCTGCCCCT+AGG + chr1_2:56852715-56852734 Msa0079110:intron 40.0%
!! AAGGGCATCTCTTTCTTTAG+AGG - chr1_2:56852901-56852920 None:intergenic 40.0%
AAGAAAGAGATGCCCTTTAG+AGG + chr1_2:56852904-56852923 Msa0079110:intron 40.0%
TGCAGAGATTGTGTAGTCAT+TGG + chr1_2:56853131-56853150 Msa0079110:intron 40.0%
GCAGAGATTGTGTAGTCATT+GGG + chr1_2:56853132-56853151 Msa0079110:intron 40.0%
GCTATATGAGGAATCAAAGC+CGG - chr1_2:56853200-56853219 None:intergenic 40.0%
CTCCTGAACAGAACTTCATA+TGG - chr1_2:56853245-56853264 None:intergenic 40.0%
TATTAAGTGCCATAGCAAGC+TGG - chr1_2:56853311-56853330 None:intergenic 40.0%
! CTAGGGTTTTTATGCACAGA+AGG - chr1_2:56853348-56853367 None:intergenic 40.0%
GCCAACATGGGAACAAAAAA+TGG + chr1_2:56853613-56853632 Msa0079110:intron 40.0%
!! ACTCTTAAAGAGTGCCCTTA+GGG - chr1_2:56853806-56853825 None:intergenic 40.0%
!! AACTCTTAAAGAGTGCCCTT+AGG - chr1_2:56853807-56853826 None:intergenic 40.0%
CCTATAGCATCATAGCAGTT+TGG - chr1_2:56854149-56854168 None:intergenic 40.0%
CCAAACTGCTATGATGCTAT+AGG + chr1_2:56854146-56854165 Msa0079110:CDS 40.0%
GGTTTCAGTCTTCAGTAAGA+AGG + chr1_2:56854229-56854248 Msa0079110:intron 40.0%
TCATTGGAATTTCAAGAGGG+TGG - chr1_2:56854366-56854385 None:intergenic 40.0%
!!! AAAACTGACCCGTTGGTTTT+GGG + chr1_2:56854385-56854404 Msa0079110:intron 40.0%
GTTTGTATCCCAAAACCAAC+GGG - chr1_2:56854396-56854415 None:intergenic 40.0%
GGTTTGTATCCCAAAACCAA+CGG - chr1_2:56854397-56854416 None:intergenic 40.0%
CTTGACAGTGTGTTTATTGC+TGG + chr1_2:56854724-56854743 Msa0079110:intron 40.0%
AGTAGCCCTACAATTCTTGT+AGG + chr1_2:56854793-56854812 Msa0079110:intron 40.0%
GTAGCCCTACAATTCTTGTA+GGG + chr1_2:56854794-56854813 Msa0079110:intron 40.0%
CAGAACCCTACAAGAATTGT+AGG - chr1_2:56854802-56854821 None:intergenic 40.0%
GAACTATTTGACTGCTTAGC+TGG + chr1_2:56854867-56854886 Msa0079110:intron 40.0%
GTGAATAAGCATCTGCTACT+CGG + chr1_2:56855097-56855116 Msa0079110:intron 40.0%
AATGAAACCCGTAATGAGGA+AGG - chr1_2:56855209-56855228 None:intergenic 40.0%
TTTATGAGAACATTGGCGAG+GGG + chr1_2:56855257-56855276 Msa0079110:intron 40.0%
!! TCTAGTCCATTTTTGCTCCA+TGG + chr1_2:56855352-56855371 Msa0079110:intron 40.0%
GGGAAAACGTTGAATTTCCA+TGG - chr1_2:56855372-56855391 None:intergenic 40.0%
ACTTCTATAGGTAGAACGGA+GGG - chr1_2:56855392-56855411 None:intergenic 40.0%
! CCATCTAGAAAGTCTTGTCT+AGG - chr1_2:56855440-56855459 None:intergenic 40.0%
CCTAGACAAGACTTTCTAGA+TGG + chr1_2:56855437-56855456 Msa0079110:intron 40.0%
AGACAAGACTTTCTAGATGG+CGG + chr1_2:56855440-56855459 Msa0079110:intron 40.0%
TCAATATTTCCCTATGGCCT+CGG + chr1_2:56855641-56855660 Msa0079110:CDS 40.0%
TCGAATACCATCTTAAACCG+AGG - chr1_2:56855661-56855680 None:intergenic 40.0%
TTGCATTTCGCAAACTGTTC+AGG - chr1_2:56855690-56855709 None:intergenic 40.0%
TAACGCCTCATGACATAATG+AGG - chr1_2:56855745-56855764 None:intergenic 40.0%
! TTATGTCATGAGGCGTTATG+CGG + chr1_2:56855747-56855766 Msa0079110:CDS 40.0%
CCACTTAAACTCTGAGTTTG+GGG + chr1_2:56855789-56855808 Msa0079110:CDS 40.0%
TTAAACTCTGAGTTTGGGGA+TGG + chr1_2:56855793-56855812 Msa0079110:CDS 40.0%
ATTGCAGCTTGAACTGAATC+TGG + chr1_2:56855890-56855909 Msa0079110:intron 40.0%
! GAATCTGGAACGACTTAGAA+TGG + chr1_2:56855905-56855924 Msa0079110:CDS 40.0%
TCCATTTCAAATTGCTGGTG+TGG + chr1_2:56856122-56856141 Msa0079110:intron 40.0%
ACCACACCAGCAATTTGAAA+TGG - chr1_2:56856126-56856145 None:intergenic 40.0%
GCTTTCAATCCTTTCATACC+TGG + chr1_2:56856315-56856334 Msa0079110:intron 40.0%
GCAACAAAACCAGGTATGAA+AGG - chr1_2:56856327-56856346 None:intergenic 40.0%
CGCTTTATACTTACAGGCTT+TGG - chr1_2:56856883-56856902 None:intergenic 40.0%
GTTTATCAGGACTCGATGTT+GGG - chr1_2:56857016-56857035 None:intergenic 40.0%
! TGGTGAAGGATTTTGCAAGT+AGG + chr1_2:56857063-56857082 Msa0079110:CDS 40.0%
! TGAAGGATTTTGCAAGTAGG+TGG + chr1_2:56857066-56857085 Msa0079110:CDS 40.0%
!!! CAGCAATTTTTTGTGCGGTA+TGG + chr1_2:56857133-56857152 Msa0079110:CDS 40.0%
ATCCCTAAGATCTTAGTTGC+TGG - chr1_2:56857624-56857643 None:intergenic 40.0%
ATGAGATTTGGGAGACACGT+CGG - chr1_2:56847170-56847189 None:intergenic 45.0%
CCCAAATCTCATCACGTCAA+TGG + chr1_2:56847178-56847197 Msa0079110:five_prime_UTR 45.0%
GCCATTGACGTGATGAGATT+TGG - chr1_2:56847182-56847201 None:intergenic 45.0%
TGATGTCGCCTCAAACACAA+TGG + chr1_2:56847330-56847349 Msa0079110:CDS 45.0%
GCACAACTCGTAAGAGACAT+CGG - chr1_2:56847830-56847849 None:intergenic 45.0%
! TGGTATTAACCTGGTGGTGT+TGG + chr1_2:56848008-56848027 Msa0079110:intron 45.0%
CAATAGGAGACCTTGCTTGT+CGG + chr1_2:56848240-56848259 Msa0079110:intron 45.0%
AGGCAGGGACAACAAAAAGA+TGG - chr1_2:56848488-56848507 None:intergenic 45.0%
! TGATTTGCGCAAAGTGGAGT+TGG + chr1_2:56848639-56848658 Msa0079110:CDS 45.0%
!! TGGGTGGTTCTGCTTTTGAT+CGG - chr1_2:56849021-56849040 None:intergenic 45.0%
CTAACTAAGAACTGGTTGGG+TGG - chr1_2:56849037-56849056 None:intergenic 45.0%
TTATGGAACCAATCTCAGCC+TGG - chr1_2:56849406-56849425 None:intergenic 45.0%
ACTTAATTCGCTGGGTAGCA+GGG - chr1_2:56849702-56849721 None:intergenic 45.0%
AACTTAATTCGCTGGGTAGC+AGG - chr1_2:56849703-56849722 None:intergenic 45.0%
ATCCAAGCTGGCTAAGTTTG+TGG + chr1_2:56849801-56849820 Msa0079110:CDS 45.0%
TTCCACAAACTTAGCCAGCT+TGG - chr1_2:56849806-56849825 None:intergenic 45.0%
TATTATCCCTCCGAGAATGG+TGG + chr1_2:56849831-56849850 Msa0079110:CDS 45.0%
ACAAGGATGTCCACCATTCT+CGG - chr1_2:56849844-56849863 None:intergenic 45.0%
!! ATGGTGGACATCCTTGTTGA+TGG + chr1_2:56849847-56849866 Msa0079110:CDS 45.0%
!! GTTCGGCATTGACTAGAGAT+AGG + chr1_2:56849990-56850009 Msa0079110:intron 45.0%
ATTGACTAGAGATAGGGCCT+AGG + chr1_2:56849997-56850016 Msa0079110:intron 45.0%
GGGCCTAGGTAGTACTTATA+AGG + chr1_2:56850011-56850030 Msa0079110:intron 45.0%
! TACATTTTTGCCAGCTGTCC+AGG + chr1_2:56850123-56850142 Msa0079110:intron 45.0%
!! CTGTCCAGGCTTTGAAACAA+GGG + chr1_2:56850137-56850156 Msa0079110:intron 45.0%
!! GCTGGTTTGATGTCTCTTCT+TGG + chr1_2:56850476-56850495 Msa0079110:intron 45.0%
!! CATGCATGTCAAGTATTGGG+TGG - chr1_2:56850573-56850592 None:intergenic 45.0%
GCAGCATGCATGTCAAGTAT+TGG - chr1_2:56850577-56850596 None:intergenic 45.0%
!!! GGATGCTTTTCAGGTCAATG+AGG + chr1_2:56850656-56850675 Msa0079110:intron 45.0%
AACCTGAGCTTGAAAAGCTC+AGG + chr1_2:56850772-56850791 Msa0079110:CDS 45.0%
TCTGTTATCCATCCATCTGC+AGG + chr1_2:56850927-56850946 Msa0079110:intron 45.0%
GTCAAATACCTGCAGATGGA+TGG - chr1_2:56850938-56850957 None:intergenic 45.0%
TAAAGGTGGTTAACGCAAGG+AGG - chr1_2:56851492-56851511 None:intergenic 45.0%
!! CGGGGGAAATGCATTTTTAG+TGG - chr1_2:56851995-56852014 None:intergenic 45.0%
CGCTATAAACTTCACTTCGG+GGG - chr1_2:56852012-56852031 None:intergenic 45.0%
CCGAAGTGAAGTTTATAGCG+AGG + chr1_2:56852012-56852031 Msa0079110:intron 45.0%
CCGTGCTTACATACAAGCAT+TGG + chr1_2:56852357-56852376 Msa0079110:CDS 45.0%
GTAGAGACAAGAAGCAACAG+CGG + chr1_2:56852424-56852443 Msa0079110:CDS 45.0%
!!! CGATCTGCTGTTTTTGCTCT+TGG + chr1_2:56852481-56852500 Msa0079110:CDS 45.0%
!!! CTGTTTTTGCTCTTGGGGAT+AGG + chr1_2:56852488-56852507 Msa0079110:CDS 45.0%
AAACCAGCAACAGATCCCTA+GGG - chr1_2:56852734-56852753 None:intergenic 45.0%
TAAACCAGCAACAGATCCCT+AGG - chr1_2:56852735-56852754 None:intergenic 45.0%
!! GCACTTAAGGGCACTCTTTA+AGG - chr1_2:56853929-56853948 None:intergenic 45.0%
!!! TACAGGTCCTTTTGGTGTCA+TGG + chr1_2:56854100-56854119 Msa0079110:intron 45.0%
TGCTCATCCATGACACCAAA+AGG - chr1_2:56854110-56854129 None:intergenic 45.0%
TCGCATAATACACCAGCATC+AGG + chr1_2:56854184-56854203 Msa0079110:CDS 45.0%
GTCAGAATGTTACCTGATGC+TGG - chr1_2:56854199-56854218 None:intergenic 45.0%
ATGCTATTGCGGCCTAAAGA+AGG + chr1_2:56854278-56854297 Msa0079110:intron 45.0%
TCCAATGAAAACTGACCCGT+TGG + chr1_2:56854378-56854397 Msa0079110:intron 45.0%
! ACCAACGGGTCAGTTTTCAT+TGG - chr1_2:56854382-56854401 None:intergenic 45.0%
!!! GAAAACTGACCCGTTGGTTT+TGG + chr1_2:56854384-56854403 Msa0079110:intron 45.0%
TTCAGCTCATTATGTCTCGG+AGG + chr1_2:56854622-56854641 Msa0079110:intron 45.0%
TTTAGACAAGGTCAGCTTCC+TGG + chr1_2:56854668-56854687 Msa0079110:intron 45.0%
TTAGACAAGGTCAGCTTCCT+GGG + chr1_2:56854669-56854688 Msa0079110:intron 45.0%
TAATGAGGAAGGAGAGGGAA+CGG - chr1_2:56855198-56855217 None:intergenic 45.0%
TTCCCTCTCCTTCCTCATTA+CGG + chr1_2:56855198-56855217 Msa0079110:intron 45.0%
GACTTCTATAGGTAGAACGG+AGG - chr1_2:56855393-56855412 None:intergenic 45.0%
GACAAGACTTTCTAGATGGC+GGG + chr1_2:56855441-56855460 Msa0079110:intron 45.0%
TGACAAAACTTCAGACACCC+AGG - chr1_2:56855477-56855496 None:intergenic 45.0%
GGCAGGTCAATATTTCCCTA+TGG + chr1_2:56855635-56855654 Msa0079110:intron 45.0%
CATCTTAAACCGAGGCCATA+GGG - chr1_2:56855653-56855672 None:intergenic 45.0%
CCCCAAACTCAGAGTTTAAG+TGG - chr1_2:56855792-56855811 None:intergenic 45.0%
GAAGGTAAGAATCTGCAAGC+TGG + chr1_2:56856028-56856047 Msa0079110:intron 45.0%
TTGGAGAAGTTCTTCCTGCA+AGG - chr1_2:56856826-56856845 None:intergenic 45.0%
GGTTTATCAGGACTCGATGT+TGG - chr1_2:56857017-56857036 None:intergenic 45.0%
ACCTATAACTGTTGCGGAAG+TGG + chr1_2:56857034-56857053 Msa0079110:CDS 45.0%
TCCACTTCCGCAACAGTTAT+AGG - chr1_2:56857038-56857057 None:intergenic 45.0%
CTTGCAAAATCCTTCACCAG+TGG - chr1_2:56857062-56857081 None:intergenic 45.0%
! GGATTTTGCAAGTAGGTGGA+AGG + chr1_2:56857070-56857089 Msa0079110:CDS 45.0%
! TTTTGCAAGTAGGTGGAAGG+CGG + chr1_2:56857073-56857092 Msa0079110:CDS 45.0%
GACTCTCTGATTCCATCAAG+AGG + chr1_2:56857201-56857220 Msa0079110:CDS 45.0%
!! AAAAAAAAAAAAAAATTCAT+TGG + chr1_2:56848082-56848101 Msa0079110:intron 5.0%
TGGACTTCAACAGGAGCTTG+AGG + chr1_2:56847661-56847680 Msa0079110:CDS 50.0%
!! TTAACCTGGTGGTGTTGGCT+TGG + chr1_2:56848013-56848032 Msa0079110:intron 50.0%
!! TAACCTGGTGGTGTTGGCTT+GGG + chr1_2:56848014-56848033 Msa0079110:intron 50.0%
! TTGAGTAGGAGCACACTCCA+AGG - chr1_2:56848041-56848060 None:intergenic 50.0%
TTGGAGTGTGCTCCTACTCA+AGG + chr1_2:56848040-56848059 Msa0079110:intron 50.0%
GCTAAACTGCCACCTTGAGT+AGG - chr1_2:56848055-56848074 None:intergenic 50.0%
CTTAATTCGCTGGGTAGCAG+GGG - chr1_2:56849701-56849720 None:intergenic 50.0%
ATAGGTGGCTGAATCCAAGC+TGG + chr1_2:56849789-56849808 Msa0079110:intron 50.0%
! GGACATCCTTGTTGATGGAG+AGG + chr1_2:56849852-56849871 Msa0079110:CDS 50.0%
TGTTTCAAAGCCTGGACAGC+TGG - chr1_2:56850136-56850155 None:intergenic 50.0%
!! GCTGTCCAGGCTTTGAAACA+AGG + chr1_2:56850136-56850155 Msa0079110:intron 50.0%
! CAGACCCTTGTTTCAAAGCC+TGG - chr1_2:56850144-56850163 None:intergenic 50.0%
!! TGCCTGAGCTTTTCAAGCTC+AGG - chr1_2:56850777-56850796 None:intergenic 50.0%
CAGGCAGAAAGCAGTCTCAA+AGG + chr1_2:56850791-56850810 Msa0079110:CDS 50.0%
GACAACATGCCCATGTTTGC+TGG + chr1_2:56851149-56851168 Msa0079110:intron 50.0%
TATGTATGAGCTGAGTGGGC+TGG + chr1_2:56852162-56852181 Msa0079110:intron 50.0%
! ATGTATGAGCTGAGTGGGCT+GGG + chr1_2:56852163-56852182 Msa0079110:intron 50.0%
AACCAGCAACAGATCCCTAG+GGG - chr1_2:56852733-56852752 None:intergenic 50.0%
! GAGCTGGCTTCAGCTATATG+AGG - chr1_2:56853212-56853231 None:intergenic 50.0%
GAGCTTGCAGAAGCTGCTTA+TGG + chr1_2:56853262-56853281 Msa0079110:CDS 50.0%
!! GAGTACACTCCAGCTTGCTA+TGG + chr1_2:56853299-56853318 Msa0079110:intron 50.0%
AGTGCCCTTAAGTGCCCTAA+GGG + chr1_2:56853934-56853953 Msa0079110:intron 50.0%
! AGTGCCCTTAGGGCACTTAA+GGG - chr1_2:56853941-56853960 None:intergenic 50.0%
CTTGCTAACGAGTGCCCTTA+GGG - chr1_2:56853951-56853970 None:intergenic 50.0%
TCTTGCTAACGAGTGCCCTT+AGG - chr1_2:56853952-56853971 None:intergenic 50.0%
AGGCCGCAATAGCATCAATG+TGG - chr1_2:56854273-56854292 None:intergenic 50.0%
AGCTCATTATGTCTCGGAGG+CGG + chr1_2:56854625-56854644 Msa0079110:intron 50.0%
TTAAGCAGAACGCATTGCCC+AGG - chr1_2:56854689-56854708 None:intergenic 50.0%
TTCTTCACCTAGCTCCTAGC+TGG - chr1_2:56855043-56855062 None:intergenic 50.0%
! GATTAGCTCCGTATAGCTGC+AGG + chr1_2:56855130-56855149 Msa0079110:intron 50.0%
! TTTGGGGTCCTGCAGCTATA+CGG - chr1_2:56855141-56855160 None:intergenic 50.0%
TCCCTCTCCTTCCTCATTAC+GGG + chr1_2:56855199-56855218 Msa0079110:intron 50.0%
ACCCGTAATGAGGAAGGAGA+GGG - chr1_2:56855203-56855222 None:intergenic 50.0%
AACCCGTAATGAGGAAGGAG+AGG - chr1_2:56855204-56855223 None:intergenic 50.0%
TGATGGCAAGAAGGACTCGA+GGG - chr1_2:56855313-56855332 None:intergenic 50.0%
! TTGATGGCAAGAAGGACTCG+AGG - chr1_2:56855314-56855333 None:intergenic 50.0%
!! GTCAGGTGTTGATGGCAAGA+AGG - chr1_2:56855322-56855341 None:intergenic 50.0%
CCATCTTAAACCGAGGCCAT+AGG - chr1_2:56855654-56855673 None:intergenic 50.0%
CCTATGGCCTCGGTTTAAGA+TGG + chr1_2:56855651-56855670 Msa0079110:CDS 50.0%
TTGCTCGCATGCTTGATTCC+AGG + chr1_2:56856212-56856231 Msa0079110:intron 50.0%
CATGCTTGATTCCAGGAAGC+AGG + chr1_2:56856219-56856238 Msa0079110:intron 50.0%
GATTCCATCAAGAGGATCCC+TGG + chr1_2:56857209-56857228 Msa0079110:CDS 50.0%
TGTTCAATGCAGACCCACCA+GGG - chr1_2:56857229-56857248 None:intergenic 50.0%
TTGTTCAATGCAGACCCACC+AGG - chr1_2:56857230-56857249 None:intergenic 50.0%
! TGGTGGGTCTGCATTGAACA+AGG + chr1_2:56857229-56857248 Msa0079110:CDS 50.0%
GAGTGTGCTCCTACTCAAGG+TGG + chr1_2:56848043-56848062 Msa0079110:intron 55.0%
GGATGTCCACCATTCTCGGA+GGG - chr1_2:56849840-56849859 None:intergenic 55.0%
AGGATGTCCACCATTCTCGG+AGG - chr1_2:56849841-56849860 None:intergenic 55.0%
!! TTGCAGTGCCGGTGTTGAGA+AGG + chr1_2:56850242-56850261 Msa0079110:intron 55.0%
GCTGCAGACCTTCTCAACAC+CGG - chr1_2:56850253-56850272 None:intergenic 55.0%
GAGTGCCCTTAAGTGCCCTA+AGG + chr1_2:56853933-56853952 Msa0079110:intron 55.0%
! GAGTGCCCTTAGGGCACTTA+AGG - chr1_2:56853942-56853961 None:intergenic 55.0%
GCTAGCTGCTCCCAATCTTG+AGG - chr1_2:56854991-56855010 None:intergenic 55.0%
CTAGCTCCTAGCTGGTTGCA+GGG - chr1_2:56855035-56855054 None:intergenic 55.0%
!! TCTAGATGGCGGGACTCTCT+TGG + chr1_2:56855451-56855470 Msa0079110:intron 55.0%
CTCTGAGTTTGGGGATGGTC+AGG + chr1_2:56855798-56855817 Msa0079110:CDS 55.0%
TGCTGTCGGTCCTGATCTGA+AGG + chr1_2:56856535-56856554 Msa0079110:intron 55.0%
TCCATCAAGAGGATCCCTGG+TGG + chr1_2:56857212-56857231 Msa0079110:CDS 55.0%
CCATCAAGAGGATCCCTGGT+GGG + chr1_2:56857213-56857232 Msa0079110:CDS 55.0%
GCTGGAATGCCATGCTCAAC+AGG - chr1_2:56857606-56857625 None:intergenic 55.0%
!! GTGGTGTTGGCTTGGGACCT+TGG + chr1_2:56848021-56848040 Msa0079110:intron 60.0%
AGCAACAGATCCCTAGGGGC+AGG - chr1_2:56852729-56852748 None:intergenic 60.0%
TGCCCCTAGGGATCTGTTGC+TGG + chr1_2:56852728-56852747 Msa0079110:intron 60.0%
! TCGGAGGCGGATTCCATGCT+TGG + chr1_2:56854638-56854657 Msa0079110:CDS 60.0%
TCTCGACCCTGCAACCAGCT+AGG + chr1_2:56855026-56855045 Msa0079110:intron 60.0%
CCTAGCTCCTAGCTGGTTGC+AGG - chr1_2:56855036-56855055 None:intergenic 60.0%
CCTGCAACCAGCTAGGAGCT+AGG + chr1_2:56855033-56855052 Msa0079110:intron 60.0%
CAGCTTCAGGACCTGCTTCC+TGG - chr1_2:56856233-56856252 None:intergenic 60.0%
CAGGAAGCAGGTCCTGAAGC+TGG + chr1_2:56856231-56856250 Msa0079110:intron 60.0%
TGTTGCGGAAGTGGAGCCAC+TGG + chr1_2:56857043-56857062 Msa0079110:CDS 60.0%
GGAAGTGGAGCCACTGGTGA+AGG + chr1_2:56857049-56857068 Msa0079110:CDS 60.0%
CCCACCAGGGATCCTCTTGA+TGG - chr1_2:56857216-56857235 None:intergenic 60.0%
GGTCCCAAGCCAACACCACC+AGG - chr1_2:56848020-56848039 None:intergenic 65.0%
! ATGGCGGGACTCTCTTGGCC+TGG + chr1_2:56855456-56855475 Msa0079110:intron 65.0%
TGGCGGGACTCTCTTGGCCT+GGG + chr1_2:56855457-56855476 Msa0079110:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 56847151 56857720 56847151 ID=Msa0079110;Name=Msa0079110
chr1_2 mRNA 56847151 56857720 56847151 ID=Msa0079110-mRNA-1;Parent=Msa0079110;Name=Msa0079110-mRNA-1;_AED=0.06;_eAED=0.07;_QI=174|0.94|0.9|1|0.94|0.95|20|410|708
chr1_2 exon 56847151 56847351 56847151 ID=Msa0079110-mRNA-1:exon:17870;Parent=Msa0079110-mRNA-1
chr1_2 exon 56847461 56847572 56847461 ID=Msa0079110-mRNA-1:exon:17871;Parent=Msa0079110-mRNA-1
chr1_2 exon 56847660 56847700 56847660 ID=Msa0079110-mRNA-1:exon:17872;Parent=Msa0079110-mRNA-1
chr1_2 exon 56848577 56848672 56848577 ID=Msa0079110-mRNA-1:exon:17873;Parent=Msa0079110-mRNA-1
chr1_2 exon 56848863 56848964 56848863 ID=Msa0079110-mRNA-1:exon:17874;Parent=Msa0079110-mRNA-1
chr1_2 exon 56849407 56849490 56849407 ID=Msa0079110-mRNA-1:exon:17875;Parent=Msa0079110-mRNA-1
chr1_2 exon 56849793 56849873 56849793 ID=Msa0079110-mRNA-1:exon:17876;Parent=Msa0079110-mRNA-1
chr1_2 exon 56850669 56850812 56850669 ID=Msa0079110-mRNA-1:exon:17877;Parent=Msa0079110-mRNA-1
chr1_2 exon 56850949 56851040 56850949 ID=Msa0079110-mRNA-1:exon:17878;Parent=Msa0079110-mRNA-1
chr1_2 exon 56851589 56851670 56851589 ID=Msa0079110-mRNA-1:exon:17879;Parent=Msa0079110-mRNA-1
chr1_2 exon 56852340 56852525 56852340 ID=Msa0079110-mRNA-1:exon:17880;Parent=Msa0079110-mRNA-1
chr1_2 exon 56853185 56853300 56853185 ID=Msa0079110-mRNA-1:exon:17881;Parent=Msa0079110-mRNA-1
chr1_2 exon 56853405 56853463 56853405 ID=Msa0079110-mRNA-1:exon:17882;Parent=Msa0079110-mRNA-1
chr1_2 exon 56854105 56854205 56854105 ID=Msa0079110-mRNA-1:exon:17883;Parent=Msa0079110-mRNA-1
chr1_2 exon 56854627 56854677 56854627 ID=Msa0079110-mRNA-1:exon:17884;Parent=Msa0079110-mRNA-1
chr1_2 exon 56855640 56855819 56855640 ID=Msa0079110-mRNA-1:exon:17885;Parent=Msa0079110-mRNA-1
chr1_2 exon 56855897 56856031 56855897 ID=Msa0079110-mRNA-1:exon:17886;Parent=Msa0079110-mRNA-1
chr1_2 exon 56856234 56856308 56856234 ID=Msa0079110-mRNA-1:exon:17887;Parent=Msa0079110-mRNA-1
chr1_2 exon 56856831 56856888 56856831 ID=Msa0079110-mRNA-1:exon:17888;Parent=Msa0079110-mRNA-1
chr1_2 exon 56857006 56857720 56857006 ID=Msa0079110-mRNA-1:exon:17889;Parent=Msa0079110-mRNA-1
chr1_2 five_prime_UTR 56847151 56847324 56847151 ID=Msa0079110-mRNA-1:five_prime_utr;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56847325 56847351 56847325 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56847461 56847572 56847461 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56847660 56847700 56847660 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56848577 56848672 56848577 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56848863 56848964 56848863 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56849407 56849490 56849407 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56849793 56849873 56849793 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56850669 56850812 56850669 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56850949 56851040 56850949 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56851589 56851670 56851589 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56852340 56852525 56852340 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56853185 56853300 56853185 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56853405 56853463 56853405 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56854105 56854205 56854105 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56854627 56854677 56854627 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56855640 56855819 56855640 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56855897 56856031 56855897 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56856234 56856308 56856234 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56856831 56856888 56856831 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 CDS 56857006 56857310 56857006 ID=Msa0079110-mRNA-1:cds;Parent=Msa0079110-mRNA-1
chr1_2 three_prime_UTR 56857311 56857720 56857311 ID=Msa0079110-mRNA-1:three_prime_utr;Parent=Msa0079110-mRNA-1
Gene Sequence

>Msa0079110

ATGGCTGATGTCGCCTCAAACACAATGAGTCCTTCTAGTGCATTTGATCTAGGAGCATTCGTTGGTGATTTAACCATTGAAGAAGATCTAAACGGGTTAATATACTCTCTTCTATTATTGCAGTTCCAAATTACAATCTATGGACTTCAACAGGAGCTTGAGGAATGTAAGAATGATGAAGTTGTTGCAAATATACTATCTAAAGGTCCAAAACTTAGAGATTATACTAAGGGAGTTGAGAATGATTTGCGCAAAGTGGAGTTGGATTCAATTCAGGATTATATTAAAGAGAGTGATAATCTAGTCTCTCTTCATGACCAAATTCATGATTGTGATAATATCTTGTCACATATGGAAACTCTGCTAAGTGGATTTCAGGCTGAGATTGGTTCCATAAGTTCAGACATTAAAATTCTGCAAGAGAAGTCTATGGATATGGGTTTGAGGCTTAAGAATCGCAAGGTGGCTGAATCCAAGCTGGCTAAGTTTGTGGAAGACATTATTATCCCTCCGAGAATGGTGGACATCCTTGTTGATGGAGAGGTCAATGAGGAATACATGAGAACTCTTGAGATTCTAAGTAAGAAACTGAAGTTTGTAGAAGTGGACACAATGGTTAAAGCTTCAAAAGCTCTAAAAGATGTTCAACCTGAGCTTGAAAAGCTCAGGCAGAAAGCAGTCTCAAAGGTATTTGACTTCATTGTTCAGAAACTATATGCATTGAGAAAACCCAAAACAAATATCCAAATACTTCAACAAAGTGTCCTTTTAAAGTACAAGTATGTTGTTAACTTTCTCAAGGAACATGGCAAAGAAGTATATAATGAAGTTCGTGCAGCTTATATTGATACAATGAACAAGGTTCTTAGTGCTCATTTCCGTGCTTACATACAAGCATTGGAGAAACTGCAATTGGATATAGCAACATCCTATGATTTAATTGGTGTAGAGACAAGAAGCAACAGCGGTCTTTTTGCAACAGCATGGCAACCGCTAAAGAATCGATCTGCTGTTTTTGCTCTTGGGGATAGGATTAATATATTGAAGGAAATTGATGAACCGGCTTTGATTCCTCATATAGCTGAAGCCAGCTCTATTAAATATCCATATGAAGTTCTGTTCAGGAGCTTGCAGAAGCTGCTTATGGATACTGCTACTTCAGAATATAATTTCTGTGAGGATTTTTATGGGGAACAACATATGTTCTATGAAATTTTTTCAGGTCCTTTTGGTGTCATGGATGAGCATTTCAGTACAATACTTCCAAACTGCTATGATGCTATAGGTCTAATGCTTATGATTCGCATAATACACCAGCATCAGCTCATTATGTCTCGGAGGCGGATTCCATGCTTGGATTCTTATTTAGACAAGGTCAATATTTCCCTATGGCCTCGGTTTAAGATGGTATTCGACATGCACCTGAACAGTTTGCGAAATGCAAATGTGAAGACATTGTGGGAAGATGATGTTCATCCTCATTATGTCATGAGGCGTTATGCGGAGTTTACTGCTTCACTTATCCACTTAAACTCTGAGTTTGGGGATGGTCAGCTTGAACTGAATCTGGAACGACTTAGAATGGCCATTGATGATTTACTTATCAAGCTTGCCAAGAACTTCACAAAGCCAAAACTACAAACGGTGTTTCTTATAAACAATTATGATATGACAATCGCTGTTTTGAAGGAAGCAGGTCCTGAAGCTGGCAAAATTCAAATGCACTTTGAGGAACTACTGAAGAGCAATACAGCATTATTTGTGGAAGAACTTCTCCAAGAGCATTTTAATGATTTAATCAAGTTTGTCAAGGCCAAAGCCTCTGAGGACCCAACATCGAGTCCTGATAAACCTATAACTGTTGCGGAAGTGGAGCCACTGGTGAAGGATTTTGCAAGTAGGTGGAAGGCGGCAATAGAGTTGATGCACAAAGATGTCATCACATCTTTCAGCAATTTTTTGTGCGGTATGGAGATCTTAAGAGCTGCATTGACCCAATTGCTACTTTACTATACGAGACTCTCTGATTCCATCAAGAGGATCCCTGGTGGGTCTGCATTGAACAAGGATCTTGTTTCCATATCTTCAATCATGTATGAGATTAGGAAATATTCGAGGACTTTCTAA

Protein sequence

>Msa0079110

MADVASNTMSPSSAFDLGAFVGDLTIEEDLNGLIYSLLLLQFQITIYGLQQELEECKNDEVVANILSKGPKLRDYTKGVENDLRKVELDSIQDYIKESDNLVSLHDQIHDCDNILSHMETLLSGFQAEIGSISSDIKILQEKSMDMGLRLKNRKVAESKLAKFVEDIIIPPRMVDILVDGEVNEEYMRTLEILSKKLKFVEVDTMVKASKALKDVQPELEKLRQKAVSKVFDFIVQKLYALRKPKTNIQILQQSVLLKYKYVVNFLKEHGKEVYNEVRAAYIDTMNKVLSAHFRAYIQALEKLQLDIATSYDLIGVETRSNSGLFATAWQPLKNRSAVFALGDRINILKEIDEPALIPHIAEASSIKYPYEVLFRSLQKLLMDTATSEYNFCEDFYGEQHMFYEIFSGPFGVMDEHFSTILPNCYDAIGLMLMIRIIHQHQLIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNANVKTLWEDDVHPHYVMRRYAEFTASLIHLNSEFGDGQLELNLERLRMAIDDLLIKLAKNFTKPKLQTVFLINNYDMTIAVLKEAGPEAGKIQMHFEELLKSNTALFVEELLQEHFNDLIKFVKAKASEDPTSSPDKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMEILRAALTQLLLYYTRLSDSIKRIPGGSALNKDLVSISSIMYEIRKYSRTF*