AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0065550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0065550 MtrunA17_Chr1g0169181 89.312 814 37 3 1 812 1 766 0.0 1415
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0065550 AT3G23980.1 48.762 525 211 5 295 812 241 714 2.26e-145 445

Find 200 sgRNAs with CRISPR-Local

Find 738 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTCTTCTTGGTTCTGAATT+TGG 0.040687 1_2:+28057933 None:intergenic
TCTTCACATGGTTCGGTTTC+TGG 0.073450 1_2:-28055339 Msa0065550:CDS
CTCTTCTTGGTTCTGAATTT+GGG 0.092130 1_2:+28057934 None:intergenic
CTCTTCAAATTTCTTCAATT+TGG 0.103048 1_2:-28057762 Msa0065550:five_prime_UTR
GCACAGGCTGTTTCTGATTT+TGG 0.108677 1_2:+28055943 None:intergenic
TTCCATATATGCAATTATTT+TGG 0.155948 1_2:-28045922 Msa0065550:three_prime_UTR
TTAATAAATGAATAATAATT+TGG 0.168319 1_2:+28057997 None:intergenic
TGCAGATTTCTCTCTCTTCT+TGG 0.176182 1_2:+28057921 None:intergenic
ACTACTCAAAACATGGTTAA+TGG 0.192030 1_2:-28046686 Msa0065550:CDS
GGGTCTGGACCTCAAGTTTC+CGG 0.192845 1_2:+28046726 None:intergenic
TTGAAAATTGAAACGTTAAA+AGG 0.212207 1_2:+28057817 None:intergenic
TAACCAATGGAATCATATTT+AGG 0.224019 1_2:+28055118 None:intergenic
TTCCAAAATAATTGCATATA+TGG 0.228349 1_2:+28045920 None:intergenic
TCTACATCTACCGAGGATTT+AGG 0.246320 1_2:-28049089 Msa0065550:intron
AGTATTTCCTTTCAAATAAC+TGG 0.248186 1_2:+28045647 None:intergenic
ACGAAAATGTATAAAGCTAT+TGG 0.248791 1_2:-28046166 Msa0065550:three_prime_UTR
GAAACTACACATTCATCTTT+TGG 0.250935 1_2:-28048448 Msa0065550:CDS
GCAAAATTCTTCAAAAGAAA+TGG 0.265858 1_2:-28045977 Msa0065550:three_prime_UTR
AAAGATGAATGTGTAGTTTC+AGG 0.266863 1_2:+28048451 None:intergenic
TAGTGTCTTCAGGTGGCTTA+TGG 0.274534 1_2:+28054891 None:intergenic
TCCGTTGATGTTGAATTTAT+TGG 0.276314 1_2:+28055067 None:intergenic
ACAGAATTGTTACTCTTGTT+TGG 0.277700 1_2:+28055483 None:intergenic
CCCGTTCCCACAAAGCTTCT+TGG 0.279682 1_2:+28045814 None:intergenic
TGATGAGCGTGCCAAGTTAT+TGG 0.288852 1_2:-28052796 Msa0065550:CDS
GGTTAAACAAATTCACATTC+TGG 0.291107 1_2:+28055832 None:intergenic
AATGAAACAAATGATATATA+TGG 0.294067 1_2:-28055642 Msa0065550:CDS
CTTTGCCTTGGTTGGCATAC+TGG 0.297755 1_2:+28046122 None:intergenic
GGCTCTCTCTCTTCTGTCTC+TGG 0.305635 1_2:+28058018 None:intergenic
TAGTCAAAAGCTCTAATCTT+TGG 0.309700 1_2:+28046705 None:intergenic
GCCAGAGGATGCAGTCTTCT+TGG 0.312652 1_2:+28055989 None:intergenic
TTCAAATTGATTCTGCGATC+TGG 0.314491 1_2:-28057791 Msa0065550:five_prime_UTR
ACTAGTCAGTCCAGCCTTCA+TGG 0.315047 1_2:-28055522 Msa0065550:CDS
TTAATGAGACGTGGAACTTT+TGG 0.316337 1_2:-28045781 Msa0065550:three_prime_UTR
TCTTGCTCAGGTTGATAAAA+TGG 0.320209 1_2:+28054974 None:intergenic
CGCTGGTTCTTTGCCTTGGT+TGG 0.335802 1_2:+28046114 None:intergenic
AAAGAAGATGTTGCTGTCTA+AGG 0.339145 1_2:-28049168 Msa0065550:CDS
ATGATAAGTGCTAAGGAAAA+TGG 0.341352 1_2:-28054803 Msa0065550:CDS
AACTACTATTGCACAAAACT+TGG 0.341490 1_2:+28045854 None:intergenic
TTTGAAAGCTGTTTATTGAT+TGG 0.344259 1_2:-28045948 Msa0065550:three_prime_UTR
TGACCCGTTACTCATGGATC+TGG 0.350602 1_2:+28046082 None:intergenic
TTCTAAATGACTAAACTTAG+AGG 0.351500 1_2:+28054949 None:intergenic
TATTATAGTTTCATTATACT+TGG 0.354225 1_2:+28045672 None:intergenic
GTTCGAGTTAATGAGTTAGA+TGG 0.361536 1_2:-28055909 Msa0065550:CDS
GACTGAAAATTATAATCATC+AGG 0.365639 1_2:-28053564 Msa0065550:intron
TTCTCAAATGGCGTCGGCTC+AGG 0.367856 1_2:-28057657 Msa0065550:exon
GGTCTGGACCTCAAGTTTCC+GGG 0.375907 1_2:+28046727 None:intergenic
CTGCCAGAGCTGGTTTGTCT+TGG 0.381148 1_2:-28047745 Msa0065550:CDS
CCAAGAAGCTTTGTGGGAAC+GGG 0.381558 1_2:-28045814 Msa0065550:three_prime_UTR
CAAAATTCTTCAAAAGAAAT+GGG 0.386735 1_2:-28045976 Msa0065550:three_prime_UTR
TAGGTAGTGGAAAGAGTGTT+GGG 0.387141 1_2:-28046281 Msa0065550:CDS
TCTAAGGTACGAAAGGCTTC+AGG 0.388140 1_2:-28049152 Msa0065550:CDS
ATTTATTGGTGAATGGTTAG+AGG 0.390404 1_2:+28055081 None:intergenic
AACTTAGAGGCGTCTTGCTC+AGG 0.391985 1_2:+28054962 None:intergenic
CGAAAATGTATAAAGCTATT+GGG 0.393453 1_2:-28046165 Msa0065550:three_prime_UTR
TAGTGGCTCTTCACATGGTT+CGG 0.395243 1_2:-28055346 Msa0065550:CDS
AGTGATTTGCCTAGTCTTCA+TGG 0.398609 1_2:-28055151 Msa0065550:CDS
AGTCTTCTTGGCCCGCTCTT+CGG 0.399061 1_2:+28056001 None:intergenic
CAAATCACTATCAGATCTAA+TGG 0.399113 1_2:+28055165 None:intergenic
AAGACCCTTGATTACTACTT+TGG 0.399332 1_2:+28055811 None:intergenic
TTTAACCAAAGTAGTAATCA+AGG 0.399880 1_2:-28055816 Msa0065550:CDS
GTACGAAAGGCTTCAGGATT+CGG 0.402189 1_2:-28049146 Msa0065550:CDS
AATTGTTACTCTTGTTTGGC+TGG 0.402249 1_2:+28055487 None:intergenic
ATCCGAAGTCATTGGCTTAG+AGG 0.414659 1_2:-28052772 Msa0065550:CDS
CTCTCTCTCTCGATCAGATC+GGG 0.417054 1_2:-28057871 Msa0065550:five_prime_UTR
AATTCTAGCACTTTGGATAG+TGG 0.418051 1_2:-28055363 Msa0065550:CDS
AGTCAAAAGCTCTAATCTTT+GGG 0.418246 1_2:+28046706 None:intergenic
GCCAAGAAGACTGCATCCTC+TGG 0.420613 1_2:-28055990 Msa0065550:CDS
CAATCAATTGAAATCAGAAA+TGG 0.420675 1_2:-28053187 Msa0065550:CDS
CCTCAGTTGCTACTTTGCTC+AGG 0.423512 1_2:-28047673 Msa0065550:CDS
AAGCAGAAATTTCTTCATAC+AGG 0.424586 1_2:-28051483 Msa0065550:intron
TAGTTGCTCTCTGCCAGAGC+TGG 0.425201 1_2:-28047755 Msa0065550:CDS
TGGATTATGAAGCTATTTCC+TGG 0.428453 1_2:-28046257 Msa0065550:CDS
TCCATTCATTCCATGAAGGC+TGG 0.430594 1_2:+28055512 None:intergenic
ATGTGTAGTTTCAGGAACTA+TGG 0.430689 1_2:+28048459 None:intergenic
AATGCGCTGGTTCTTTGCCT+TGG 0.438881 1_2:+28046110 None:intergenic
ACCTTCTTGAAGAGCATCAA+TGG 0.439176 1_2:+28050590 None:intergenic
AGCCGACGCCATTTGAGAAA+AGG 0.440203 1_2:+28057661 None:intergenic
TCAAATTGATTCTGCGATCT+GGG 0.440785 1_2:-28057790 Msa0065550:five_prime_UTR
AAATGTTGCTAGACCTTCTA+CGG 0.445970 1_2:-28055002 Msa0065550:CDS
TGCATGCGTTACAGTCAATC+AGG 0.445988 1_2:+28045542 None:intergenic
AGAAGAATTGATGAAATCCT+TGG 0.447637 1_2:-28048114 Msa0065550:CDS
TCATACGTAACACGAGAATC+TGG 0.451777 1_2:+28046635 None:intergenic
AGGCTACCAAGAAGCTTTGT+GGG 0.452765 1_2:-28045820 Msa0065550:three_prime_UTR
GCCGACGCCATTTGAGAAAA+GGG 0.455781 1_2:+28057662 None:intergenic
TCAAGCAGCAATGACACATC+AGG 0.457870 1_2:-28054926 Msa0065550:CDS
GCCGACAAATTCTAGCACTT+TGG 0.465447 1_2:-28055370 Msa0065550:CDS
TCCAAAGTGCTAGAATTTGT+CGG 0.465999 1_2:+28055369 None:intergenic
TTAGGTAGTGGAAAGAGTGT+TGG 0.470028 1_2:-28046282 Msa0065550:intron
AAGCAAGAGCATCTCGAAGC+TGG 0.470034 1_2:-28057629 Msa0065550:CDS
TCCAGCCTTCATGGAATGAA+TGG 0.470214 1_2:-28055513 Msa0065550:CDS
AACCCAGATCCATGAGTAAC+GGG 0.470970 1_2:-28046085 Msa0065550:three_prime_UTR
ATTGTCATTGATTTCTGTGT+TGG 0.472642 1_2:+28048516 None:intergenic
ATGTTGAATTTATTGGTGAA+TGG 0.472862 1_2:+28055074 None:intergenic
ACCAAGAAGCTTTGTGGGAA+CGG 0.475945 1_2:-28045815 Msa0065550:three_prime_UTR
AAAGCTCTAATCTTTGGGTC+TGG 0.476751 1_2:+28046711 None:intergenic
GAGGCTACCAAGAAGCTTTG+TGG 0.481237 1_2:-28045821 Msa0065550:three_prime_UTR
CTTTGCTGACCCGTTACTCA+TGG 0.485656 1_2:+28046076 None:intergenic
TTTAGAGAATCAAGAAAAGA+TGG 0.488430 1_2:+28055022 None:intergenic
TTAAAAGGAATTGAAAGTGT+TGG 0.490509 1_2:+28057832 None:intergenic
TCTGTGTTGGAGTTTGAAGC+AGG 0.494362 1_2:+28048529 None:intergenic
TTCACATCAACAGGTTGAGC+TGG 0.494499 1_2:-28052868 Msa0065550:intron
TCTTCTTGGTTCTGAATTTG+GGG 0.498421 1_2:+28057935 None:intergenic
ATCTGAGAGTTCAAGAATGA+AGG 0.500940 1_2:-28048081 Msa0065550:intron
TTATTGGCATCCGAAGTCAT+TGG 0.502045 1_2:-28052780 Msa0065550:CDS
TAAAATGGAGACCCCGTAGA+AGG 0.504559 1_2:+28054989 None:intergenic
GGCTTCCATTCATTCCATGA+AGG 0.505970 1_2:+28055508 None:intergenic
GGCGGAGCTGTTACTGACAC+TGG 0.507273 1_2:-28055864 Msa0065550:CDS
GACTTCGGATGCCAATAACT+TGG 0.509815 1_2:+28052785 None:intergenic
GCAAGAGATCAAAGCACAAC+TGG 0.511320 1_2:-28053154 Msa0065550:intron
ACATCTAACTTTATTGCTTG+CGG 0.514316 1_2:+28045571 None:intergenic
TGGTGGTTTGTTGTTCCATA+CGG 0.515033 1_2:+28055591 None:intergenic
TTGGATAGTGGCTCTTCACA+TGG 0.515846 1_2:-28055351 Msa0065550:CDS
AGCGTAGAAAAGTACTTTGG+TGG 0.517565 1_2:+28055574 None:intergenic
TGTTCGTTGCCTCAGTACAC+TGG 0.520756 1_2:-28046036 Msa0065550:three_prime_UTR
AACTAGCAAGCTTCTCTGAT+CGG 0.521333 1_2:-28046216 Msa0065550:exon
ACCAATAAATTCAACATCAA+CGG 0.524156 1_2:-28055068 Msa0065550:CDS
ACCATTGATGCTCTTCAAGA+AGG 0.525225 1_2:-28050591 Msa0065550:intron
TGACCAAGACAAACCAGCTC+TGG 0.527388 1_2:+28047742 None:intergenic
ATAAGTTTATGTAAGAATCC+TGG 0.527746 1_2:-28046839 Msa0065550:intron
TGGATTCGTTGCAACGTGAA+TGG 0.527909 1_2:-28057742 Msa0065550:five_prime_UTR
TCTCGAAGCTGGAAAACGTC+GGG 0.531286 1_2:-28057618 Msa0065550:intron
AGTAATCAAGGGTCTTTAGC+TGG 0.532144 1_2:-28055804 Msa0065550:CDS
TTCTTTGCAACGCGCTCTTG+AGG 0.534950 1_2:-28053633 Msa0065550:CDS
ATACCTAAATATGATTCCAT+TGG 0.536353 1_2:-28055121 Msa0065550:CDS
ATTATAGTTTCATTATACTT+GGG 0.538337 1_2:+28045673 None:intergenic
TAATACATCTACCACTAGTC+CGG 0.541808 1_2:-28055754 Msa0065550:CDS
CTCCTCTAAGCCAATGACTT+CGG 0.545944 1_2:+28052770 None:intergenic
ACCACATCTGATGGCATTGG+CGG 0.547565 1_2:-28055882 Msa0065550:CDS
CTCAGATGATTCAAATGCCA+AGG 0.548162 1_2:+28048097 None:intergenic
TAGTGGAAAGAGTGTTGGGA+TGG 0.550235 1_2:-28046277 Msa0065550:CDS
GAGAGCGTAGAAAAGTACTT+TGG 0.551446 1_2:+28055571 None:intergenic
GACCCGTTACTCATGGATCT+GGG 0.556398 1_2:+28046083 None:intergenic
AGTCATTGGCTTAGAGGAGA+AGG 0.557070 1_2:-28052766 Msa0065550:intron
ATTCCTCACTTCATAACCAA+TGG 0.557880 1_2:+28055105 None:intergenic
AACCTCTCGCAGCATGAGCA+AGG 0.558469 1_2:+28045603 None:intergenic
ATAGTAGTTGGATATGAAAG+AGG 0.558602 1_2:-28045840 Msa0065550:three_prime_UTR
CATTAATGCACTTATTTCTG+AGG 0.561666 1_2:-28048377 Msa0065550:intron
ACCTGAAGACACTAAAACTG+TGG 0.561839 1_2:-28054882 Msa0065550:CDS
ATTCACACCGGTGGTGTTGG+TGG 0.562626 1_2:-28055618 Msa0065550:CDS
AGATAAACAAGGAGTTGTCC+CGG 0.563321 1_2:-28046745 Msa0065550:CDS
GTTAAAGCTTGAGAAGCAGC+TGG 0.563480 1_2:-28051515 Msa0065550:CDS
GAACATTCAGATATTGATGA+AGG 0.564471 1_2:-28055726 Msa0065550:CDS
GAACATTCCGTATGCAGATG+AGG 0.566725 1_2:-28046612 Msa0065550:CDS
ATCACTCTCATCTGATCATG+AGG 0.567360 1_2:+28048406 None:intergenic
ATCTACCACTAGTCCGGTGG+AGG 0.567627 1_2:-28055748 Msa0065550:CDS
TAATATACCAGTTATTTGAA+AGG 0.568653 1_2:-28045654 Msa0065550:three_prime_UTR
ATATCTGAATGTTCCTCCAC+CGG 0.568990 1_2:+28055735 None:intergenic
AATGTATAAAGCTATTGGGA+TGG 0.572003 1_2:-28046161 Msa0065550:three_prime_UTR
CGGAAATCCACCAACACCAC+CGG 0.572990 1_2:+28055611 None:intergenic
GTTACCACATCTGATGGCAT+TGG 0.573153 1_2:-28055885 Msa0065550:CDS
TTATGAAGCTATTTCCTGGT+GGG 0.573572 1_2:-28046253 Msa0065550:CDS
GGATCTGGGTTGAAATGCGC+TGG 0.574512 1_2:+28046097 None:intergenic
TCATCACCCTCATCTGCATA+CGG 0.574776 1_2:+28046605 None:intergenic
AATGTTGCTAGACCTTCTAC+GGG 0.575821 1_2:-28055001 Msa0065550:CDS
GGAATTCACACCGGTGGTGT+TGG 0.576102 1_2:-28055621 Msa0065550:CDS
AGGAAACAAACCTAAATCCT+CGG 0.580331 1_2:+28049079 None:intergenic
TGATCATGAGGAATATTCAC+AGG 0.581107 1_2:+28048418 None:intergenic
ATCTCGAAGCTGGAAAACGT+CGG 0.581971 1_2:-28057619 Msa0065550:CDS
TCGTTGCCTCAGTACACTGG+AGG 0.583111 1_2:-28046033 Msa0065550:three_prime_UTR
CAACCCAGATCCATGAGTAA+CGG 0.583336 1_2:-28046086 Msa0065550:three_prime_UTR
GATGGAGTTACCACATCTGA+TGG 0.584090 1_2:-28055891 Msa0065550:CDS
AAGTGCTAAGGAAAATGGCA+TGG 0.585974 1_2:-28054798 Msa0065550:CDS
AATAAAACAAGTAAAAGAGA+TGG 0.586995 1_2:-28049113 Msa0065550:CDS
CAATGGTTGACTGCAAATCA+CGG 0.587621 1_2:+28050607 None:intergenic
CAAGAGTAACAATTCTGTGA+AGG 0.588955 1_2:-28055478 Msa0065550:CDS
ATTCCATTGGTTATGAAGTG+AGG 0.589979 1_2:-28055108 Msa0065550:CDS
TCACATGGTTCGGTTTCTGG+AGG 0.590717 1_2:-28055336 Msa0065550:intron
GGTGTTGGTGGATTTCCGTA+TGG 0.595213 1_2:-28055606 Msa0065550:CDS
ATGTTCCTCCACCGGACTAG+TGG 0.595690 1_2:+28055743 None:intergenic
GTTGCTGTCTAAGGTACGAA+AGG 0.597821 1_2:-28049159 Msa0065550:CDS
TTAACCAAAGTAGTAATCAA+GGG 0.598551 1_2:-28055815 Msa0065550:CDS
AACATTCCGTATGCAGATGA+GGG 0.604691 1_2:-28046611 Msa0065550:CDS
AAATGGCGTCGGCTCAGGTG+AGG 0.606141 1_2:-28057652 Msa0065550:CDS
AACCTTGCTCATGCTGCGAG+AGG 0.608215 1_2:-28045605 Msa0065550:three_prime_UTR
CAAGAAGCTTTGTGGGAACG+GGG 0.608805 1_2:-28045813 Msa0065550:three_prime_UTR
ACATCAACAGGTTGAGCTGG+AGG 0.609822 1_2:-28052865 Msa0065550:intron
GCGGAGCTGTTACTGACACT+GGG 0.619830 1_2:-28055863 Msa0065550:CDS
ATAGTTGCACCATGAAGACT+AGG 0.621060 1_2:+28055142 None:intergenic
TACATCTACCACTAGTCCGG+TGG 0.624763 1_2:-28055751 Msa0065550:CDS
CCTGAGCAAAGTAGCAACTG+AGG 0.626800 1_2:+28047673 None:intergenic
TCCGCCAATGCCATCAGATG+TGG 0.629114 1_2:+28055881 None:intergenic
CGTTGCCTCAGTACACTGGA+GGG 0.631781 1_2:-28046032 Msa0065550:three_prime_UTR
ATTATTGAAGGAGATAAACA+AGG 0.637691 1_2:-28046756 Msa0065550:intron
CCGACGCCATTTGAGAAAAG+GGG 0.638515 1_2:+28057663 None:intergenic
AGAATTCTGAACAGTGCCAG+AGG 0.639352 1_2:+28055974 None:intergenic
AAGGATTATGCAGTTACTGA+TGG 0.642365 1_2:-28055459 Msa0065550:CDS
GATATATATGGAATTCACAC+CGG 0.642496 1_2:-28055630 Msa0065550:CDS
CCTGAAGACACTAAAACTGT+GGG 0.644563 1_2:-28054881 Msa0065550:CDS
CACACCGATGATAAGTGCTA+AGG 0.647322 1_2:-28054810 Msa0065550:CDS
GTATGCAGATGAGGGTGATG+AGG 0.658889 1_2:-28046603 Msa0065550:intron
CAAGCAGCAATGACACATCA+GGG 0.661156 1_2:-28054925 Msa0065550:CDS
ACGCCATTTGAGAAAAGGGG+AGG 0.669163 1_2:+28057666 None:intergenic
GGAGTTGTCCCGGAAACTTG+AGG 0.672278 1_2:-28046735 Msa0065550:CDS
ATATATGGAATTCACACCGG+TGG 0.680753 1_2:-28055627 Msa0065550:CDS
ATTATGAAGCTATTTCCTGG+TGG 0.680779 1_2:-28046254 Msa0065550:CDS
ATGGCAATAAATCTGTTCTG+CGG 0.681705 1_2:-28045896 Msa0065550:three_prime_UTR
AGATGGCTCTACATCTACCG+AGG 0.698883 1_2:-28049096 Msa0065550:CDS
TCACGCCCTCCAGTGTACTG+AGG 0.701339 1_2:+28046027 None:intergenic
TGGTTGACTGCAAATCACGG+CGG 0.815806 1_2:+28050610 None:intergenic
ATGTTGCTAGACCTTCTACG+GGG 0.831753 1_2:-28055000 Msa0065550:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAATAAAAATTGAAGAAATT+TGG + chr1_2:28045996-28046015 None:intergenic 10.0%
!! CCTAAAAAAAAAAAAAAAAA+CGG + chr1_2:28047045-28047064 None:intergenic 10.0%
!!! ATTTTTAATGTTTTTTTTAG+GGG + chr1_2:28051239-28051258 None:intergenic 10.0%
!!! ATTTTTAGTAGAAAAATTAT+TGG - chr1_2:28052701-28052720 Msa0065550:intron 10.0%
!!! ATATTTTGATTATTTACTTA+TGG + chr1_2:28053523-28053542 None:intergenic 10.0%
!! ATCTACAATTATTACAATTA+TGG - chr1_2:28046280-28046299 Msa0065550:CDS 15.0%
!! TCTACAATTATTACAATTAT+GGG - chr1_2:28046281-28046300 Msa0065550:CDS 15.0%
!!! ACAATATTTTGTACTAAATA+GGG - chr1_2:28046375-28046394 Msa0065550:intron 15.0%
!!! TTTTTTTTTTTTGTATGAAC+CGG - chr1_2:28046447-28046466 Msa0065550:intron 15.0%
!!! CCGTTTTTTTTTTTTTTTTT+AGG - chr1_2:28047042-28047061 Msa0065550:intron 15.0%
!!! ATTTTCCATTTTTTTTAGAA+CGG - chr1_2:28047391-28047410 Msa0065550:intron 15.0%
!! AATGAAACAAATGATATATA+TGG - chr1_2:28047931-28047950 Msa0065550:intron 15.0%
!! AATTTATATCCACAATATAT+TGG + chr1_2:28049169-28049188 None:intergenic 15.0%
!! ATTTATTTAGTGCAATATTA+AGG - chr1_2:28049336-28049355 Msa0065550:intron 15.0%
!! TTTATTTAGTGCAATATTAA+GGG - chr1_2:28049337-28049356 Msa0065550:intron 15.0%
!! ATTGAAATAAAAACAATAAC+TGG + chr1_2:28049577-28049596 None:intergenic 15.0%
!! ATATGATAAGAATTAAAAAC+TGG + chr1_2:28050090-28050109 None:intergenic 15.0%
!! TATTGCTAATTAATAGATTT+AGG - chr1_2:28051951-28051970 Msa0065550:intron 15.0%
!!! ATTTTTCTTTATAGTATTTG+CGG + chr1_2:28052138-28052157 None:intergenic 15.0%
!! TTATTTCATTCTACTTAATA+TGG + chr1_2:28052439-28052458 None:intergenic 15.0%
!! AATTCAATTAGAATTCTATT+TGG - chr1_2:28055516-28055535 Msa0065550:CDS 15.0%
!! AATAACCAAATACTATAATT+TGG + chr1_2:28056227-28056246 None:intergenic 15.0%
!!! TTGGTTATTTTTACTTTTAA+TGG - chr1_2:28056238-28056257 Msa0065550:intron 15.0%
!!! TGGTTATTTTTACTTTTAAT+GGG - chr1_2:28056239-28056258 Msa0065550:intron 15.0%
!! CATGATATAACAAATAATTA+TGG + chr1_2:28056393-28056412 None:intergenic 15.0%
!!! ATTTGTTTTCCTATTTAATT+AGG - chr1_2:28056413-28056432 Msa0065550:intron 15.0%
!! AGTATTTATTAGTATAAGAA+AGG - chr1_2:28056442-28056461 Msa0065550:intron 15.0%
!! CAAGTATATAAGAAAAAAAT+TGG - chr1_2:28057128-28057147 Msa0065550:intron 15.0%
!! ATTATAGTTTCATTATACTT+GGG + chr1_2:28057903-28057922 None:intergenic 15.0%
!! TATTATAGTTTCATTATACT+TGG + chr1_2:28057904-28057923 None:intergenic 15.0%
!! TTGAAAATTGAAACGTTAAA+AGG + chr1_2:28045759-28045778 None:intergenic 20.0%
!!! TTTTATTATTAGCTTCTTCA+AGG - chr1_2:28046008-28046027 Msa0065550:three_prime_UTR 20.0%
!!! TTTGTGTTTTTGTGTAATTT+TGG - chr1_2:28046080-28046099 Msa0065550:three_prime_UTR 20.0%
!!! TTGTGTTTTTGTGTAATTTT+GGG - chr1_2:28046081-28046100 Msa0065550:three_prime_UTR 20.0%
!!! CACAATATTTTGTACTAAAT+AGG - chr1_2:28046374-28046393 Msa0065550:intron 20.0%
!!! TACATCATTTTTCGTATTTT+TGG + chr1_2:28046693-28046712 None:intergenic 20.0%
!! TCCAATGTTAAAATATTGAA+GGG - chr1_2:28046768-28046787 Msa0065550:intron 20.0%
!!! TGAATTTTTGTTACTTTCTT+AGG - chr1_2:28047069-28047088 Msa0065550:intron 20.0%
!!! ATAAACCGTTCTAAAAAAAA+TGG + chr1_2:28047399-28047418 None:intergenic 20.0%
!! TCCCATCTTAAATAATTATT+TGG - chr1_2:28047515-28047534 Msa0065550:intron 20.0%
!!! CCCAAATAATTATTTAAGAT+GGG + chr1_2:28047519-28047538 None:intergenic 20.0%
!! CCCATCTTAAATAATTATTT+GGG - chr1_2:28047516-28047535 Msa0065550:intron 20.0%
!! ACCCAAATAATTATTTAAGA+TGG + chr1_2:28047520-28047539 None:intergenic 20.0%
!! CACATTCATTAAAAACAAAT+AGG + chr1_2:28048944-28048963 None:intergenic 20.0%
!!! ATATTGGTTTAAAATCGATA+AGG + chr1_2:28049153-28049172 None:intergenic 20.0%
!!! GATTTTAAACCAATATATTG+TGG - chr1_2:28049157-28049176 Msa0065550:CDS 20.0%
!! TTATTTAGTGCAATATTAAG+GGG - chr1_2:28049338-28049357 Msa0065550:intron 20.0%
!!! TTGTTGTTTATAATAGTTAG+AGG + chr1_2:28049548-28049567 None:intergenic 20.0%
!!! TAAGAATTATAAACTTTTGC+AGG + chr1_2:28049696-28049715 None:intergenic 20.0%
!! TACGTGTTAAAAATGAAAAA+CGG - chr1_2:28049714-28049733 Msa0065550:intron 20.0%
!! AGTAACTTTCTCTTATATAT+TGG + chr1_2:28050201-28050220 None:intergenic 20.0%
!! AAGATGACAAAAAATGTTTA+CGG + chr1_2:28050880-28050899 None:intergenic 20.0%
!!! TGATTAAGATTTTCATTCAT+AGG - chr1_2:28050977-28050996 Msa0065550:intron 20.0%
!!! ATAAAGTTTAGTTTTGCTTT+TGG - chr1_2:28051072-28051091 Msa0065550:intron 20.0%
!!! CTAAATTTTTCGTTAAAGAA+GGG + chr1_2:28051112-28051131 None:intergenic 20.0%
!!! ACTAAATTTTTCGTTAAAGA+AGG + chr1_2:28051113-28051132 None:intergenic 20.0%
!! TCTTTAACGAAAAATTTAGT+AGG - chr1_2:28051113-28051132 Msa0065550:intron 20.0%
!! TGACAATATGTTTATAAGTA+GGG + chr1_2:28051373-28051392 None:intergenic 20.0%
!! AGTATTTATCTTTGTATTAG+AGG + chr1_2:28051477-28051496 None:intergenic 20.0%
!!! TATTTTTAATAGTGACTAGA+GGG + chr1_2:28051500-28051519 None:intergenic 20.0%
!!! TTATTTTTAATAGTGACTAG+AGG + chr1_2:28051501-28051520 None:intergenic 20.0%
!! TATTCAATGAATCTAAAAAG+TGG + chr1_2:28051528-28051547 None:intergenic 20.0%
!! CATTGAATAATTGATGTATT+TGG + chr1_2:28051576-28051595 None:intergenic 20.0%
!! TATTCAATGAATTCAAAAAG+TGG - chr1_2:28051587-28051606 Msa0065550:intron 20.0%
!! ATTCAATGAATTCAAAAAGT+GGG - chr1_2:28051588-28051607 Msa0065550:intron 20.0%
!!! TTTTTGCTTATAATAGTTAC+CGG - chr1_2:28051611-28051630 Msa0065550:intron 20.0%
!!! ATTTTTGTCCTTAAGTTTTT+GGG + chr1_2:28051770-28051789 None:intergenic 20.0%
!! CAAAACAATAAATCAAAAGT+TGG + chr1_2:28051998-28052017 None:intergenic 20.0%
!!! TTTTGTTCAATTAACTTCTT+AGG - chr1_2:28052013-28052032 Msa0065550:intron 20.0%
!! AAAGAAAAATGAAGATTTAG+TGG - chr1_2:28052148-28052167 Msa0065550:intron 20.0%
!! AAAGAATGAAAGAAATACTA+AGG + chr1_2:28052479-28052498 None:intergenic 20.0%
!! AAAATTATTGGAAACCTAAT+TGG - chr1_2:28052713-28052732 Msa0065550:intron 20.0%
!! AAATTATTGGAAACCTAATT+GGG - chr1_2:28052714-28052733 Msa0065550:intron 20.0%
!! GTCATATTAATTCCTAATTT+AGG - chr1_2:28053275-28053294 Msa0065550:intron 20.0%
!!! TTTTGATTATTTACTTATGG+AGG + chr1_2:28053520-28053539 None:intergenic 20.0%
!! AAACAAAACTAAACCAATAT+GGG + chr1_2:28053577-28053596 None:intergenic 20.0%
!! AAAACAAAACTAAACCAATA+TGG + chr1_2:28053578-28053597 None:intergenic 20.0%
!!! ATATTGGTTTAGTTTTGTTT+TGG - chr1_2:28053577-28053596 Msa0065550:CDS 20.0%
!!! TGTTCTCTTTTGATATAATT+AGG - chr1_2:28053928-28053947 Msa0065550:intron 20.0%
!! TTTATGACGATACAAATATT+AGG - chr1_2:28053955-28053974 Msa0065550:intron 20.0%
!! TTATGACGATACAAATATTA+GGG - chr1_2:28053956-28053975 Msa0065550:intron 20.0%
!! TTAAGAAGCTATAAAAAAGT+TGG + chr1_2:28054008-28054027 None:intergenic 20.0%
!! AATAAAACAAGTAAAAGAGA+TGG - chr1_2:28054460-28054479 Msa0065550:intron 20.0%
!! AAAAATCTGATATCAGATAT+TGG + chr1_2:28054848-28054867 None:intergenic 20.0%
!!! GAACACATTTTTTTTAAAGT+AGG - chr1_2:28055605-28055624 Msa0065550:CDS 20.0%
!!! CATTTTTTTTAAAGTAGGAT+TGG - chr1_2:28055610-28055629 Msa0065550:CDS 20.0%
!!! TCTTTTATTTTTACCAATTG+CGG - chr1_2:28056117-28056136 Msa0065550:intron 20.0%
!! TTTCCTATTTAATTAGGATT+TGG - chr1_2:28056419-28056438 Msa0065550:intron 20.0%
!! ATAAAGGATATGTGATTATA+TGG + chr1_2:28056587-28056606 None:intergenic 20.0%
!! TTGTAATCATTAAGAATACT+AGG - chr1_2:28057223-28057242 Msa0065550:intron 20.0%
!! TGTAATCATTAAGAATACTA+GGG - chr1_2:28057224-28057243 Msa0065550:intron 20.0%
!! TAGAAACTTGAATTAAAAGA+AGG - chr1_2:28057248-28057267 Msa0065550:intron 20.0%
!! CAAAATTCTTCAAAAGAAAT+GGG - chr1_2:28057597-28057616 Msa0065550:intron 20.0%
!!! TTCCATATATGCAATTATTT+TGG - chr1_2:28057651-28057670 Msa0065550:CDS 20.0%
!! TTCCAAAATAATTGCATATA+TGG + chr1_2:28057656-28057675 None:intergenic 20.0%
!! TAATATACCAGTTATTTGAA+AGG - chr1_2:28057919-28057938 Msa0065550:intron 20.0%
!! TTAAAAGGAATTGAAAGTGT+TGG + chr1_2:28045744-28045763 None:intergenic 25.0%
! CTCTTCAAATTTCTTCAATT+TGG - chr1_2:28045811-28045830 Msa0065550:three_prime_UTR 25.0%
!! TTCTTCAAGGTTTAGAATTA+GGG - chr1_2:28046021-28046040 Msa0065550:three_prime_UTR 25.0%
!!! TTAGGGCATTGATTAATTAT+TGG - chr1_2:28046038-28046057 Msa0065550:three_prime_UTR 25.0%
!! TTGTTTAGCTGATTATGTTT+TGG - chr1_2:28046199-28046218 Msa0065550:three_prime_UTR 25.0%
! TTATTAATTGCGGAGAATAA+CGG - chr1_2:28046309-28046328 Msa0065550:intron 25.0%
! GTCCAATGTTAAAATATTGA+AGG - chr1_2:28046767-28046786 Msa0065550:intron 25.0%
!!! ACCCTTCAATATTTTAACAT+TGG + chr1_2:28046772-28046791 None:intergenic 25.0%
!!! AGATTCATTTTTGTGAAAAC+AGG + chr1_2:28046904-28046923 None:intergenic 25.0%
! TTACTTTCTTAGGTTATGTT+TGG - chr1_2:28047079-28047098 Msa0065550:intron 25.0%
!!! TTAGGTTATGTTTGGTTTTA+GGG - chr1_2:28047087-28047106 Msa0065550:intron 25.0%
! TACAAAATGTTGTCAAATAG+TGG + chr1_2:28047202-28047221 None:intergenic 25.0%
! GTATTAAATAGCAACAATAG+CGG - chr1_2:28047219-28047238 Msa0065550:intron 25.0%
!!! TTTTTTTCCAAAACTGAACA+GGG + chr1_2:28047365-28047384 None:intergenic 25.0%
!!! TTTTTTTTCCAAAACTGAAC+AGG + chr1_2:28047366-28047385 None:intergenic 25.0%
!! TTATTTAAGATGGGACAAAA+CGG + chr1_2:28047510-28047529 None:intergenic 25.0%
! TTTAACCAAAGTAGTAATCA+AGG - chr1_2:28047757-28047776 Msa0065550:intron 25.0%
! TTAACCAAAGTAGTAATCAA+GGG - chr1_2:28047758-28047777 Msa0065550:intron 25.0%
! ATACCTAAATATGATTCCAT+TGG - chr1_2:28048452-28048471 Msa0065550:CDS 25.0%
! TAACCAATGGAATCATATTT+AGG + chr1_2:28048458-28048477 None:intergenic 25.0%
! ATGTTGAATTTATTGGTGAA+TGG + chr1_2:28048502-28048521 None:intergenic 25.0%
! ACCAATAAATTCAACATCAA+CGG - chr1_2:28048505-28048524 Msa0065550:CDS 25.0%
! TTTAGAGAATCAAGAAAAGA+TGG + chr1_2:28048554-28048573 None:intergenic 25.0%
! TTCTAAATGACTAAACTTAG+AGG + chr1_2:28048627-28048646 None:intergenic 25.0%
!!! TCCAGTTTTTAGTAATAATC+AGG - chr1_2:28048739-28048758 Msa0065550:intron 25.0%
! TCCTGATTATTACTAAAAAC+TGG + chr1_2:28048743-28048762 None:intergenic 25.0%
! TATTTAGTGCAATATTAAGG+GGG - chr1_2:28049339-28049358 Msa0065550:intron 25.0%
!!! AACTATTTTCTAGAAAAGAG+AGG + chr1_2:28049605-28049624 None:intergenic 25.0%
!!! TCTCTTTTCTAGAAAATAGT+TGG - chr1_2:28049604-28049623 Msa0065550:intron 25.0%
! AGTTAAATGAAAGAACTGTT+GGG + chr1_2:28049662-28049681 None:intergenic 25.0%
! AAGTTAAATGAAAGAACTGT+TGG + chr1_2:28049663-28049682 None:intergenic 25.0%
!! AATGAAAAACGGAATCTTTT+TGG - chr1_2:28049725-28049744 Msa0065550:intron 25.0%
!!! GTTGTTTCACAATTTTCAAT+GGG - chr1_2:28049750-28049769 Msa0065550:intron 25.0%
!! TTGTTTCACAATTTTCAATG+GGG - chr1_2:28049751-28049770 Msa0065550:intron 25.0%
! ATATGCTGCATAAGAAAAAA+TGG + chr1_2:28049896-28049915 None:intergenic 25.0%
! GACTGAAAATTATAATCATC+AGG - chr1_2:28050009-28050028 Msa0065550:intron 25.0%
! GAAAATTATAATCATCAGGT+TGG - chr1_2:28050013-28050032 Msa0065550:intron 25.0%
!! TACTTTGTTCTTTGTTACTT+TGG - chr1_2:28050233-28050252 Msa0065550:intron 25.0%
! CAATCAATTGAAATCAGAAA+TGG - chr1_2:28050386-28050405 Msa0065550:intron 25.0%
! AAATGATTACGCAAATAGAT+AGG + chr1_2:28050460-28050479 None:intergenic 25.0%
!! ATCTATTTGCGTAATCATTT+TGG - chr1_2:28050460-28050479 Msa0065550:intron 25.0%
! GTGAAAATCTTAGATATATC+AGG + chr1_2:28050509-28050528 None:intergenic 25.0%
!!! ACAATGTTTTTGTTGGAAAA+AGG - chr1_2:28050600-28050619 Msa0065550:CDS 25.0%
! ATGATAACTCATAGAATTTG+TGG - chr1_2:28051299-28051318 Msa0065550:intron 25.0%
! GACAATATGTTTATAAGTAG+GGG + chr1_2:28051372-28051391 None:intergenic 25.0%
! CTGACAATATGTTTATAAGT+AGG + chr1_2:28051374-28051393 None:intergenic 25.0%
! CTACTTATAAACATATTGTC+AGG - chr1_2:28051372-28051391 Msa0065550:intron 25.0%
! CTAATTCATATATACTACCT+GGG + chr1_2:28051449-28051468 None:intergenic 25.0%
! TCTAATTCATATATACTACC+TGG + chr1_2:28051450-28051469 None:intergenic 25.0%
!! CATTTTTGTCCTTAAGTTTT+TGG + chr1_2:28051771-28051790 None:intergenic 25.0%
!!! ATTCTTTTGCTTTTGATTGA+AGG - chr1_2:28052492-28052511 Msa0065550:intron 25.0%
!!! AAAGAACGAGTTTTATGTTT+AGG - chr1_2:28052606-28052625 Msa0065550:intron 25.0%
! TATAATCAGCTTAAAATGTG+CGG + chr1_2:28052906-28052925 None:intergenic 25.0%
! AGATAGAAAAATAGCATCTT+CGG - chr1_2:28053216-28053235 Msa0065550:intron 25.0%
! AAACAAGATAGAAGAAAGAT+TGG + chr1_2:28053247-28053266 None:intergenic 25.0%
! AAACTAAAGGATCCTAAATT+AGG + chr1_2:28053290-28053309 None:intergenic 25.0%
!!! TCTCTTATTGGTTTAAATCA+TGG - chr1_2:28053380-28053399 Msa0065550:intron 25.0%
!!! TTAGTTTTGTTTTGGACAAA+TGG - chr1_2:28053585-28053604 Msa0065550:CDS 25.0%
! TTTAGATAGTCAAAGTTTAG+TGG + chr1_2:28054272-28054291 None:intergenic 25.0%
!!! CTTTTACTTGTTTTATTCTC+AGG + chr1_2:28054457-28054476 None:intergenic 25.0%
! ACAAAATAATAACCATACTG+AGG + chr1_2:28054517-28054536 None:intergenic 25.0%
!!! TGGTTATTATTTTGTCTGTT+AGG - chr1_2:28054522-28054541 Msa0065550:intron 25.0%
! TTCTTAAAAGTGAATAAGAG+AGG - chr1_2:28054621-28054640 Msa0065550:intron 25.0%
!!! TGAAGAGTTTTATTGTTATC+AGG - chr1_2:28054693-28054712 Msa0065550:intron 25.0%
! ACAGTATAAATTCAAATGCT+TGG + chr1_2:28054728-28054747 None:intergenic 25.0%
! AAACAAAATGAACCTAAACT+AGG + chr1_2:28054757-28054776 None:intergenic 25.0%
!! CGAGAAAATTTTATAAATGC+TGG + chr1_2:28054871-28054890 None:intergenic 25.0%
!!! ATTTTTTGCTGTAAATGTCT+CGG + chr1_2:28054896-28054915 None:intergenic 25.0%
! TTTAATCAGGTATTATTTGC+CGG + chr1_2:28054935-28054954 None:intergenic 25.0%
! CTAAAAATGTCCAAATGATT+GGG + chr1_2:28054963-28054982 None:intergenic 25.0%
!!! AATCATTTGGACATTTTTAG+CGG - chr1_2:28054963-28054982 Msa0065550:CDS 25.0%
!!! TCTATTATTTAACTTGCTAG+TGG - chr1_2:28055570-28055589 Msa0065550:CDS 25.0%
!!! TTTTAAAGTAGGATTGGATT+TGG - chr1_2:28055616-28055635 Msa0065550:CDS 25.0%
!! TTTAAAGTAGGATTGGATTT+GGG - chr1_2:28055617-28055636 Msa0065550:CDS 25.0%
! CGATACCAAATTATAGTATT+TGG - chr1_2:28056219-28056238 Msa0065550:intron 25.0%
! AAATCTTAAAGAGATAGTCT+AGG + chr1_2:28056366-28056385 None:intergenic 25.0%
! ACTCCAAATCCTAATTAAAT+AGG + chr1_2:28056425-28056444 None:intergenic 25.0%
! AACACTGATATACAATGATT+TGG + chr1_2:28056501-28056520 None:intergenic 25.0%
! ATTGTCGAGACTATAAATAA+AGG + chr1_2:28056603-28056622 None:intergenic 25.0%
! AGTTTATTGTGACCATTTAT+GGG + chr1_2:28056649-28056668 None:intergenic 25.0%
! AAGTTTATTGTGACCATTTA+TGG + chr1_2:28056650-28056669 None:intergenic 25.0%
! AATGGTCACAATAAACTTTA+TGG - chr1_2:28056652-28056671 Msa0065550:intron 25.0%
! ATAAGTTTATGTAAGAATCC+TGG - chr1_2:28056734-28056753 Msa0065550:intron 25.0%
! CAAGAATAAATCAAAATACC+AGG + chr1_2:28056755-28056774 None:intergenic 25.0%
! ATTATTGAAGGAGATAAACA+AGG - chr1_2:28056817-28056836 Msa0065550:intron 25.0%
! TTTCAGTTGCATAATATAAC+TGG + chr1_2:28057086-28057105 None:intergenic 25.0%
!!! TTGACATCTCTTTTTGTTTT+AGG - chr1_2:28057273-28057292 Msa0065550:intron 25.0%
! ACGAAAATGTATAAAGCTAT+TGG - chr1_2:28057407-28057426 Msa0065550:intron 25.0%
! CGAAAATGTATAAAGCTATT+GGG - chr1_2:28057408-28057427 Msa0065550:intron 25.0%
! GCAAAATTCTTCAAAAGAAA+TGG - chr1_2:28057596-28057615 Msa0065550:intron 25.0%
! TTTGAAAGCTGTTTATTGAT+TGG - chr1_2:28057625-28057644 Msa0065550:CDS 25.0%
!!! TATGCAATTATTTTGGAAGA+TGG - chr1_2:28057658-28057677 Msa0065550:exon 25.0%
! AGTATTTCCTTTCAAATAAC+TGG + chr1_2:28057929-28057948 None:intergenic 25.0%
! CTTCTTCAAGGTTTAGAATT+AGG - chr1_2:28046020-28046039 Msa0065550:three_prime_UTR 30.0%
! TTTTGGTATGAGGAAATTGA+GGG - chr1_2:28046216-28046235 Msa0065550:exon 30.0%
! ATGGGTAGTGTTATTAATTG+CGG - chr1_2:28046299-28046318 Msa0065550:intron 30.0%
TCAAACAAAATGCTATCGTT+CGG + chr1_2:28046406-28046425 None:intergenic 30.0%
TGAGAACTGAGAACTAAAAA+TGG + chr1_2:28046729-28046748 None:intergenic 30.0%
AAAGTAGTCTATTCTGTTGT+TGG - chr1_2:28046975-28046994 Msa0065550:intron 30.0%
!!! CTTAGGTTATGTTTGGTTTT+AGG - chr1_2:28047086-28047105 Msa0065550:intron 30.0%
! CTGCTATTTAACAACATTGA+AGG - chr1_2:28047293-28047312 Msa0065550:intron 30.0%
!! GTATAGAATTTTAGTGTGTC+TGG - chr1_2:28047326-28047345 Msa0065550:intron 30.0%
GGTTAAACAAATTCACATTC+TGG + chr1_2:28047744-28047763 None:intergenic 30.0%
GAACATTCAGATATTGATGA+AGG - chr1_2:28047847-28047866 Msa0065550:intron 30.0%
GATATATATGGAATTCACAC+CGG - chr1_2:28047943-28047962 Msa0065550:intron 30.0%
ACAGAATTGTTACTCTTGTT+TGG + chr1_2:28048093-28048112 None:intergenic 30.0%
! ATGATTTTTGACGGAAAGTA+AGG + chr1_2:28048147-28048166 None:intergenic 30.0%
! TTCTCACGTATGATTTTTGA+CGG + chr1_2:28048156-28048175 None:intergenic 30.0%
! CTGTAGAAGCACAAAAATAA+AGG + chr1_2:28048274-28048293 None:intergenic 30.0%
CACAATATATGATGTACTAC+AGG - chr1_2:28048350-28048369 Msa0065550:intron 30.0%
CAAATCACTATCAGATCTAA+TGG + chr1_2:28048411-28048430 None:intergenic 30.0%
ATTTATTGGTGAATGGTTAG+AGG + chr1_2:28048495-28048514 None:intergenic 30.0%
TCCGTTGATGTTGAATTTAT+TGG + chr1_2:28048509-28048528 None:intergenic 30.0%
! TTTTCCTTAGCACTTATCAT+CGG + chr1_2:28048770-28048789 None:intergenic 30.0%
ATGATAAGTGCTAAGGAAAA+TGG - chr1_2:28048770-28048789 Msa0065550:intron 30.0%
!!! AGACTTTTCAACTTTAGAAC+AGG - chr1_2:28048835-28048854 Msa0065550:intron 30.0%
TTTGTAGATGTTCAAGCATT+TGG - chr1_2:28048988-28049007 Msa0065550:intron 30.0%
TTTGCAACCAATGAAAAGTT+AGG + chr1_2:28049071-28049090 None:intergenic 30.0%
!! AACTTTTCATTGGTTGCAAA+AGG - chr1_2:28049071-28049090 Msa0065550:intron 30.0%
TCATACTGCATAAATCATGT+TGG + chr1_2:28049127-28049146 None:intergenic 30.0%
GGTTATGTATACCAATATTC+TGG + chr1_2:28049222-28049241 None:intergenic 30.0%
ACATAACCTCATTATTAAGC+AGG - chr1_2:28049234-28049253 Msa0065550:intron 30.0%
CATAACCTCATTATTAAGCA+GGG - chr1_2:28049235-28049254 Msa0065550:intron 30.0%
! ATTTTCCCTGCTTAATAATG+AGG + chr1_2:28049243-28049262 None:intergenic 30.0%
!!! TACCTTGTTTTTTACACAAG+AGG + chr1_2:28049433-28049452 None:intergenic 30.0%
CTTGTGTAAAAAACAAGGTA+AGG - chr1_2:28049433-28049452 Msa0065550:intron 30.0%
!! TATAAACTTTTGCAGGTTGA+TGG + chr1_2:28049689-28049708 None:intergenic 30.0%
!! CGTTGTTTCACAATTTTCAA+TGG - chr1_2:28049749-28049768 Msa0065550:intron 30.0%
! TGTTTCACAATTTTCAATGG+GGG - chr1_2:28049752-28049771 Msa0065550:intron 30.0%
CACACACATATATTTGATAG+TGG + chr1_2:28049825-28049844 None:intergenic 30.0%
AGAAAAATCGTCAATACCAA+TGG + chr1_2:28050144-28050163 None:intergenic 30.0%
CTTTCTCTTATATATTGGAC+TGG + chr1_2:28050196-28050215 None:intergenic 30.0%
!! ACTGTTGACAATGTTTTTGT+TGG - chr1_2:28050593-28050612 Msa0065550:CDS 30.0%
TAACTCATAGAATTTGTGGT+TGG - chr1_2:28051303-28051322 Msa0065550:intron 30.0%
AACTCATAGAATTTGTGGTT+GGG - chr1_2:28051304-28051323 Msa0065550:intron 30.0%
! AGGGAGTATATATCAATTGT+AGG - chr1_2:28051634-28051653 Msa0065550:intron 30.0%
AAAATTATATCTGCATTGCC+TGG - chr1_2:28051812-28051831 Msa0065550:intron 30.0%
! GGTGATGATTTTATTAAACC+AGG + chr1_2:28051833-28051852 None:intergenic 30.0%
AATCACATCACTCTATATCA+CGG + chr1_2:28051864-28051883 None:intergenic 30.0%
AAGCAGAAATTTCTTCATAC+AGG - chr1_2:28052090-28052109 Msa0065550:intron 30.0%
GAGTACTTCAATTCAAGTAA+AGG + chr1_2:28052527-28052546 None:intergenic 30.0%
AAACCTTAGTAAAAGAAAGC+TGG + chr1_2:28052551-28052570 None:intergenic 30.0%
AAATTAGCAAGCATTACTGT+AGG + chr1_2:28052640-28052659 None:intergenic 30.0%
! TACAGTAATGCTTGCTAATT+TGG - chr1_2:28052639-28052658 Msa0065550:intron 30.0%
! TTTTAACCAGATTGTGTTGA+AGG + chr1_2:28052770-28052789 None:intergenic 30.0%
TTTAATTATCCCAGCAGTTT+GGG - chr1_2:28053020-28053039 Msa0065550:intron 30.0%
! GAGTTGTTGAAATTTTCTCT+TGG - chr1_2:28053076-28053095 Msa0065550:intron 30.0%
TTTGAAAGAAGCAAAACATC+AGG - chr1_2:28053158-28053177 Msa0065550:CDS 30.0%
TCTAATACTCACTCTCTTAT+TGG - chr1_2:28053368-28053387 Msa0065550:intron 30.0%
!! CTTATTGGTTTAAATCATGG+TGG - chr1_2:28053383-28053402 Msa0065550:intron 30.0%
GACATACAATGAATTAAACC+AGG - chr1_2:28053444-28053463 Msa0065550:intron 30.0%
! ATTTAACGGTGCTTTTATGA+TGG - chr1_2:28053541-28053560 Msa0065550:intron 30.0%
ATGTCTGATATGATACATTC+AGG - chr1_2:28053741-28053760 Msa0065550:intron 30.0%
! GTACACATATCACTATTTTC+TGG - chr1_2:28053837-28053856 Msa0065550:intron 30.0%
CCAATTAAAAAAGAGCAAGA+AGG + chr1_2:28053887-28053906 None:intergenic 30.0%
!!! CCTTCTTGCTCTTTTTTAAT+TGG - chr1_2:28053884-28053903 Msa0065550:intron 30.0%
!!! TCTTGCTCTTTTTTAATTGG+TGG - chr1_2:28053887-28053906 Msa0065550:intron 30.0%
AAAAGTTGGAACTAGAGAAT+TGG + chr1_2:28053994-28054013 None:intergenic 30.0%
GCAATGACAAATAATGAACA+TGG + chr1_2:28054374-28054393 None:intergenic 30.0%
! AATTTTCCAGCATTCATAAC+CGG - chr1_2:28054913-28054932 Msa0065550:CDS 30.0%
! TTAAAGTACTCCCAATCATT+TGG - chr1_2:28054950-28054969 Msa0065550:CDS 30.0%
GCTAAAAATGTCCAAATGAT+TGG + chr1_2:28054964-28054983 None:intergenic 30.0%
!! ATTGTCATTGATTTCTGTGT+TGG + chr1_2:28055060-28055079 None:intergenic 30.0%
AAAGATGAATGTGTAGTTTC+AGG + chr1_2:28055125-28055144 None:intergenic 30.0%
! GAAACTACACATTCATCTTT+TGG - chr1_2:28055125-28055144 Msa0065550:CDS 30.0%
!! CATTAATGCACTTATTTCTG+AGG - chr1_2:28055196-28055215 Msa0065550:CDS 30.0%
TAGATGAGATAAAACAGGAT+GGG + chr1_2:28055364-28055383 None:intergenic 30.0%
TTAGATGAGATAAAACAGGA+TGG + chr1_2:28055365-28055384 None:intergenic 30.0%
CTACTTAGATGAGATAAAAC+AGG + chr1_2:28055369-28055388 None:intergenic 30.0%
AGCTACAGTAAAATGCTATA+CGG + chr1_2:28055427-28055446 None:intergenic 30.0%
AGAAGAATTGATGAAATCCT+TGG - chr1_2:28055459-28055478 Msa0065550:CDS 30.0%
! AGAAGTGTAAAACTATGACT+GGG + chr1_2:28055761-28055780 None:intergenic 30.0%
! TAGAAGTGTAAAACTATGAC+TGG + chr1_2:28055762-28055781 None:intergenic 30.0%
!!! GTTAGATTCTAGTTTTGTCT+TGG - chr1_2:28055856-28055875 Msa0065550:CDS 30.0%
!!! TTCTAGTTTTGTCTTGGTTT+CGG - chr1_2:28055862-28055881 Msa0065550:CDS 30.0%
! GTTTTATCTCAGCTATGTTT+TGG - chr1_2:28055958-28055977 Msa0065550:CDS 30.0%
! CATGATTTTTCTTTCAGTTG+TGG - chr1_2:28056006-28056025 Msa0065550:CDS 30.0%
! ATTTTTCTTTCAGTTGTGGT+TGG - chr1_2:28056010-28056029 Msa0065550:CDS 30.0%
! TTTTTCTTTCAGTTGTGGTT+GGG - chr1_2:28056011-28056030 Msa0065550:CDS 30.0%
! TATCTCAGTTAGTTTGAAAC+TGG - chr1_2:28056071-28056090 Msa0065550:intron 30.0%
GTGCTTTGTATTATACTCTA+TGG - chr1_2:28056558-28056577 Msa0065550:intron 30.0%
CTGTTTCGTTTCATTATTGA+AGG - chr1_2:28056805-28056824 Msa0065550:intron 30.0%
! AGTCAAAAGCTCTAATCTTT+GGG + chr1_2:28056870-28056889 None:intergenic 30.0%
! TAGTCAAAAGCTCTAATCTT+TGG + chr1_2:28056871-28056890 None:intergenic 30.0%
ACTACTCAAAACATGGTTAA+TGG - chr1_2:28056887-28056906 Msa0065550:intron 30.0%
GAATTTACTGACAATAGATG+AGG + chr1_2:28057064-28057083 None:intergenic 30.0%
!! AAACATCGATTTCATTGTCA+AGG - chr1_2:28057152-28057171 Msa0065550:intron 30.0%
!! AACATCGATTTCATTGTCAA+GGG - chr1_2:28057153-28057172 Msa0065550:intron 30.0%
!!! TCTCTTTTTGTTTTAGGTAG+TGG - chr1_2:28057279-28057298 Msa0065550:intron 30.0%
AATGTATAAAGCTATTGGGA+TGG - chr1_2:28057412-28057431 Msa0065550:intron 30.0%
AACTACTATTGCACAAAACT+TGG + chr1_2:28057722-28057741 None:intergenic 30.0%
!! AAGTTTTGTGCAATAGTAGT+TGG - chr1_2:28057721-28057740 Msa0065550:five_prime_UTR 30.0%
ATAGTAGTTGGATATGAAAG+AGG - chr1_2:28057733-28057752 Msa0065550:five_prime_UTR 30.0%
! CAATTTTCTTTAATGAGACG+TGG - chr1_2:28057783-28057802 Msa0065550:five_prime_UTR 30.0%
ACATCTAACTTTATTGCTTG+CGG + chr1_2:28058005-28058024 None:intergenic 30.0%
!! TCTTCTTGGTTCTGAATTTG+GGG + chr1_2:28045641-28045660 None:intergenic 35.0%
!! CTCTTCTTGGTTCTGAATTT+GGG + chr1_2:28045642-28045661 None:intergenic 35.0%
!! TCTCTTCTTGGTTCTGAATT+TGG + chr1_2:28045643-28045662 None:intergenic 35.0%
! TTCAAATTGATTCTGCGATC+TGG - chr1_2:28045782-28045801 Msa0065550:three_prime_UTR 35.0%
! TCAAATTGATTCTGCGATCT+GGG - chr1_2:28045783-28045802 Msa0065550:three_prime_UTR 35.0%
TTGTGTATGCTACAGTAATG+TGG - chr1_2:28046127-28046146 Msa0065550:three_prime_UTR 35.0%
TGTGTATGCTACAGTAATGT+GGG - chr1_2:28046128-28046147 Msa0065550:three_prime_UTR 35.0%
!!! GCTGATTATGTTTTGGTATG+AGG - chr1_2:28046206-28046225 Msa0065550:exon 35.0%
!! GTTTTGGTATGAGGAAATTG+AGG - chr1_2:28046215-28046234 Msa0065550:exon 35.0%
TAGGAAGTGATGAAAAGAAG+AGG - chr1_2:28046242-28046261 Msa0065550:CDS 35.0%
GATGCTGTTAAATCTCTTGA+TGG + chr1_2:28046530-28046549 None:intergenic 35.0%
AGAGATTTAACAGCATCTGA+AGG - chr1_2:28046533-28046552 Msa0065550:intron 35.0%
! TAGTCTAGACTTTTACTCTC+GGG + chr1_2:28046576-28046595 None:intergenic 35.0%
! CTAGTCTAGACTTTTACTCT+CGG + chr1_2:28046577-28046596 None:intergenic 35.0%
TAAAAGTCTAGACTAGAACC+TGG - chr1_2:28046581-28046600 Msa0065550:intron 35.0%
TTTGGATCAATAGAACTTCG+AGG - chr1_2:28046614-28046633 Msa0065550:CDS 35.0%
ATTCAACTAACTACATGCCA+TGG - chr1_2:28046843-28046862 Msa0065550:intron 35.0%
GACTACTTTCTTCATTCCAT+AGG + chr1_2:28046964-28046983 None:intergenic 35.0%
TAGTCTATTCTGTTGTTGGA+AGG - chr1_2:28046979-28046998 Msa0065550:intron 35.0%
GCTATAGAACTATTGCATAG+CGG + chr1_2:28047169-28047188 None:intergenic 35.0%
! TTAGTGTGTCTGGATTTTGT+TGG - chr1_2:28047336-28047355 Msa0065550:intron 35.0%
! GTTCGAGTTAATGAGTTAGA+TGG - chr1_2:28047664-28047683 Msa0065550:CDS 35.0%
AAGACCCTTGATTACTACTT+TGG + chr1_2:28047765-28047784 None:intergenic 35.0%
TAATACATCTACCACTAGTC+CGG - chr1_2:28047819-28047838 Msa0065550:intron 35.0%
! AATTGTTACTCTTGTTTGGC+TGG + chr1_2:28048089-28048108 None:intergenic 35.0%
CAAGAGTAACAATTCTGTGA+AGG - chr1_2:28048095-28048114 Msa0065550:CDS 35.0%
AAGGATTATGCAGTTACTGA+TGG - chr1_2:28048114-28048133 Msa0065550:CDS 35.0%
! TCCAAAGTGCTAGAATTTGT+CGG + chr1_2:28048207-28048226 None:intergenic 35.0%
AATTCTAGCACTTTGGATAG+TGG - chr1_2:28048210-28048229 Msa0065550:intron 35.0%
!! TAAGTCATTGTCAGGTTGAA+TGG + chr1_2:28048307-28048326 None:intergenic 35.0%
! ATTCCATTGGTTATGAAGTG+AGG - chr1_2:28048465-28048484 Msa0065550:CDS 35.0%
ATTCCTCACTTCATAACCAA+TGG + chr1_2:28048471-28048490 None:intergenic 35.0%
AAATGTTGCTAGACCTTCTA+CGG - chr1_2:28048571-28048590 Msa0065550:intron 35.0%
!! TCTTGCTCAGGTTGATAAAA+TGG + chr1_2:28048602-28048621 None:intergenic 35.0%
!!! CTTTTCAACTTTAGAACAGG+TGG - chr1_2:28048838-28048857 Msa0065550:intron 35.0%
! ATGCTGATTGTATGATGTTG+CGG - chr1_2:28048906-28048925 Msa0065550:intron 35.0%
TGTTCAAGCATTTGGTTGTT+AGG - chr1_2:28048996-28049015 Msa0065550:intron 35.0%
GTTCAAGCATTTGGTTGTTA+GGG - chr1_2:28048997-28049016 Msa0065550:intron 35.0%
TTCAAGCATTTGGTTGTTAG+GGG - chr1_2:28048998-28049017 Msa0065550:intron 35.0%
! AAACGCACCTAACTTTTCAT+TGG - chr1_2:28049061-28049080 Msa0065550:intron 35.0%
TTTCCATACGTCAACTATTC+AGG - chr1_2:28049274-28049293 Msa0065550:intron 35.0%
TTCCATACGTCAACTATTCA+GGG - chr1_2:28049275-28049294 Msa0065550:intron 35.0%
AGCCTCTTGTGTAAAAAACA+AGG - chr1_2:28049428-28049447 Msa0065550:intron 35.0%
AACTGTTGGGAAAACAACAT+AGG + chr1_2:28049649-28049668 None:intergenic 35.0%
! GTTTCACAATTTTCAATGGG+GGG - chr1_2:28049753-28049772 Msa0065550:intron 35.0%
! TATTTTCAACCACTTGCCAT+TGG - chr1_2:28050125-28050144 Msa0065550:intron 35.0%
! CTCTTATATATTGGACTGGA+GGG + chr1_2:28050192-28050211 None:intergenic 35.0%
! TCTCTTATATATTGGACTGG+AGG + chr1_2:28050193-28050212 None:intergenic 35.0%
GCGTTATTCGTACTCTAATT+TGG - chr1_2:28050255-28050274 Msa0065550:intron 35.0%
! TAGCTGCTTTGTGTTTGATT+TGG - chr1_2:28050285-28050304 Msa0065550:intron 35.0%
!! CTTTGTGTTTGATTTGGAGT+AGG - chr1_2:28050291-28050310 Msa0065550:intron 35.0%
TGATTACGCAAATAGATAGG+AGG + chr1_2:28050457-28050476 None:intergenic 35.0%
AACAAAGTAGAAAGCAACTG+CGG + chr1_2:28050645-28050664 None:intergenic 35.0%
ATCTCACAAGTCAGTTATGT+GGG + chr1_2:28051341-28051360 None:intergenic 35.0%
CATATATACTACCTGGGTTT+CGG + chr1_2:28051443-28051462 None:intergenic 35.0%
TTGCTTATAATAGTTACCGG+AGG - chr1_2:28051614-28051633 Msa0065550:intron 35.0%
TGCTTATAATAGTTACCGGA+GGG - chr1_2:28051615-28051634 Msa0065550:intron 35.0%
CAATTGATATATACTCCCTC+CGG + chr1_2:28051633-28051652 None:intergenic 35.0%
GTAGGATGTGCTTTCAAAAA+AGG - chr1_2:28051652-28051671 Msa0065550:intron 35.0%
! CTCTTTTAATGAGCATGTGT+AGG - chr1_2:28051923-28051942 Msa0065550:intron 35.0%
! ATTTAGTGGATATTCACCCA+TGG - chr1_2:28052162-28052181 Msa0065550:intron 35.0%
AAATGGTGGCACTTATTTGA+AGG - chr1_2:28052195-28052214 Msa0065550:intron 35.0%
AATGGTGGCACTTATTTGAA+GGG - chr1_2:28052196-28052215 Msa0065550:intron 35.0%
! AGACTTTTGTCTAATGTTGC+AGG - chr1_2:28052246-28052265 Msa0065550:intron 35.0%
AATGTTGCAGGTCAAGTTAT+AGG - chr1_2:28052258-28052277 Msa0065550:intron 35.0%
! TGAATGTGTTAAGAGAGTGT+TGG - chr1_2:28052304-28052323 Msa0065550:intron 35.0%
! TCACCAGCTTTCTTTTACTA+AGG - chr1_2:28052545-28052564 Msa0065550:intron 35.0%
ATTGGAAACCTAATTGGGTT+TGG - chr1_2:28052719-28052738 Msa0065550:intron 35.0%
AATTGTGACCAAACCCAATT+AGG + chr1_2:28052730-28052749 None:intergenic 35.0%
GTCACAATTACTTCTTGCAT+CGG - chr1_2:28052741-28052760 Msa0065550:intron 35.0%
CTTTAATTATCCCAGCAGTT+TGG - chr1_2:28053019-28053038 Msa0065550:intron 35.0%
GAAGCAAAACATCAGGATTA+AGG - chr1_2:28053165-28053184 Msa0065550:CDS 35.0%
CAAAACATCAGGATTAAGGA+GGG - chr1_2:28053169-28053188 Msa0065550:CDS 35.0%
TAAGCACGCTAACAAACTAA+AGG + chr1_2:28053303-28053322 None:intergenic 35.0%
AAGAGAGTGAGTATTAGAGA+GGG + chr1_2:28053366-28053385 None:intergenic 35.0%
TAAGAGAGTGAGTATTAGAG+AGG + chr1_2:28053367-28053386 None:intergenic 35.0%
AAAATTGAACCCACACAAAG+TGG - chr1_2:28053418-28053437 Msa0065550:intron 35.0%
ATGTCTGATATCAATGTGTC+TGG - chr1_2:28053698-28053717 Msa0065550:intron 35.0%
!! ACATATATCAGAAGCACCAA+TGG + chr1_2:28053774-28053793 None:intergenic 35.0%
! ATTGGTGCTTCTGATATATG+TGG - chr1_2:28053773-28053792 Msa0065550:intron 35.0%
CTGTTCTTAATCTGAAGATC+AGG + chr1_2:28054198-28054217 None:intergenic 35.0%
AAAGTTTAGTGGCCAACAAA+TGG + chr1_2:28054261-28054280 None:intergenic 35.0%
AAAGAAGATGTTGCTGTCTA+AGG - chr1_2:28054405-28054424 Msa0065550:intron 35.0%
AGGAAACAAACCTAAATCCT+CGG + chr1_2:28054497-28054516 None:intergenic 35.0%
! TTAGGTTTGTTTCCTCAGTA+TGG - chr1_2:28054502-28054521 Msa0065550:intron 35.0%
TCTGTTAGGTGTTCTTTCAT+GGG - chr1_2:28054536-28054555 Msa0065550:intron 35.0%
GTATCTATTAGCAAGATGCT+TGG - chr1_2:28054669-28054688 Msa0065550:intron 35.0%
TACTGTAGTGTACCTAGTTT+AGG - chr1_2:28054742-28054761 Msa0065550:CDS 35.0%
ACCTATGTACAAGACATTCT+GGG + chr1_2:28054819-28054838 None:intergenic 35.0%
TACCTATGTACAAGACATTC+TGG + chr1_2:28054820-28054839 None:intergenic 35.0%
!! TGATTGGGAGTACTTTAATC+AGG + chr1_2:28054948-28054967 None:intergenic 35.0%
ATGTGTAGTTTCAGGAACTA+TGG + chr1_2:28055117-28055136 None:intergenic 35.0%
TGATCATGAGGAATATTCAC+AGG + chr1_2:28055158-28055177 None:intergenic 35.0%
!! AATGCACTTATTTCTGAGGT+AGG - chr1_2:28055200-28055219 Msa0065550:CDS 35.0%
TATATAAACAGAGACGAAGC+TGG - chr1_2:28055252-28055271 Msa0065550:intron 35.0%
TCACGTTTCTCATTACTGTT+TGG + chr1_2:28055299-28055318 None:intergenic 35.0%
AAACAGTAATGAGAAACGTG+AGG - chr1_2:28055298-28055317 Msa0065550:intron 35.0%
AAGTAATTGTCCAAGCAGTA+AGG + chr1_2:28055331-28055350 None:intergenic 35.0%
GCTACAGTAAAATGCTATAC+GGG + chr1_2:28055426-28055445 None:intergenic 35.0%
! GTATAGCATTTTACTGTAGC+TGG - chr1_2:28055426-28055445 Msa0065550:CDS 35.0%
ATCTGAGAGTTCAAGAATGA+AGG - chr1_2:28055492-28055511 Msa0065550:CDS 35.0%
! CTTTTATCCGTCTTTCTGAT+CGG - chr1_2:28055694-28055713 Msa0065550:CDS 35.0%
! TTTCTGATCGGATCTAAGAT+TGG - chr1_2:28055706-28055725 Msa0065550:CDS 35.0%
! CTGGGATAAAACTAGTGTTT+TGG + chr1_2:28055743-28055762 None:intergenic 35.0%
!!! TATTTTCCGTAGCTGCTTTT+TGG - chr1_2:28055780-28055799 Msa0065550:CDS 35.0%
AAGTAGCAACTGAGGAAAAA+AGG + chr1_2:28055895-28055914 None:intergenic 35.0%
!! TATTTTTACCAATTGCGGTC+TGG - chr1_2:28056122-28056141 Msa0065550:intron 35.0%
AACTTGTCTTAGATGTGATC+TGG - chr1_2:28056180-28056199 Msa0065550:intron 35.0%
TCCTATCTAATGCCCATAAA+TGG - chr1_2:28056634-28056653 Msa0065550:intron 35.0%
ACCATTTATGGGCATTAGAT+AGG + chr1_2:28056638-28056657 None:intergenic 35.0%
!! GCTTTTGACTACTCAAAACA+TGG - chr1_2:28056880-28056899 Msa0065550:intron 35.0%
GACAGTTGTGCAATTTATGT+TGG - chr1_2:28056996-28057015 Msa0065550:intron 35.0%
! TGGATTATGAAGCTATTTCC+TGG - chr1_2:28057316-28057335 Msa0065550:intron 35.0%
! ATTATGAAGCTATTTCCTGG+TGG - chr1_2:28057319-28057338 Msa0065550:intron 35.0%
! TTATGAAGCTATTTCCTGGT+GGG - chr1_2:28057320-28057339 Msa0065550:intron 35.0%
!! TTGCTAGTTCTTCGTTTTGA+CGG + chr1_2:28057346-28057365 None:intergenic 35.0%
ATGGCAATAAATCTGTTCTG+CGG - chr1_2:28057677-28057696 Msa0065550:five_prime_UTR 35.0%
! TTAATGAGACGTGGAACTTT+TGG - chr1_2:28057792-28057811 Msa0065550:five_prime_UTR 35.0%
!! TTTTGGTGACTGTATATGCA+AGG - chr1_2:28057809-28057828 Msa0065550:five_prime_UTR 35.0%
TGCAGATTTCTCTCTCTTCT+TGG + chr1_2:28045655-28045674 None:intergenic 40.0%
GCTATATCACTGTTGCAAAG+CGG + chr1_2:28046346-28046365 None:intergenic 40.0%
GCTTTGCAACAGTGATATAG+CGG - chr1_2:28046345-28046364 Msa0065550:intron 40.0%
GATTTAACAGCATCTGAAGG+TGG - chr1_2:28046536-28046555 Msa0065550:intron 40.0%
GAACCTGGAGAGTAACAATT+TGG - chr1_2:28046596-28046615 Msa0065550:intron 40.0%
GATCCAAATTGTTACTCTCC+AGG + chr1_2:28046602-28046621 None:intergenic 40.0%
TCAATAGAACTTCGAGGCTT+TGG - chr1_2:28046620-28046639 Msa0065550:CDS 40.0%
ACTTATGTCCGAAGCTAGTA+AGG + chr1_2:28046651-28046670 None:intergenic 40.0%
TTGTTGTCACACAAGAACCA+TGG + chr1_2:28046863-28046882 None:intergenic 40.0%
! ATCTTTCAAGTCTGAGCCTA+TGG - chr1_2:28046945-28046964 Msa0065550:intron 40.0%
TTCTGTTGTTGGAAGGAACT+AGG - chr1_2:28046986-28047005 Msa0065550:intron 40.0%
AACTAGCAACAATATGGCCT+AGG + chr1_2:28047012-28047031 None:intergenic 40.0%
TCGTGCAACTAGCAACAATA+TGG + chr1_2:28047018-28047037 None:intergenic 40.0%
ATATTGTTGCTAGTTGCACG+AGG - chr1_2:28047017-28047036 Msa0065550:intron 40.0%
TCGTGGTTAGCAGAAAATAG+CGG - chr1_2:28047131-28047150 Msa0065550:intron 40.0%
TTGTCAAATAGTGGCTAGAG+TGG + chr1_2:28047193-28047212 None:intergenic 40.0%
AATTATTTGGGTCTTGCAGC+TGG - chr1_2:28047528-28047547 Msa0065550:intron 40.0%
GTAAAAAGAAAGCCGAAGAG+CGG - chr1_2:28047560-28047579 Msa0065550:intron 40.0%
TAAAAAGAAAGCCGAAGAGC+GGG - chr1_2:28047561-28047580 Msa0065550:intron 40.0%
! CGAACATTTTCAACTTGCAC+AGG + chr1_2:28047649-28047668 None:intergenic 40.0%
AGTAATCAAGGGTCTTTAGC+TGG - chr1_2:28047769-28047788 Msa0065550:intron 40.0%
ATATCTGAATGTTCCTCCAC+CGG + chr1_2:28047841-28047860 None:intergenic 40.0%
ATATATGGAATTCACACCGG+TGG - chr1_2:28047946-28047965 Msa0065550:intron 40.0%
!! TGGTGGTTTGTTGTTCCATA+CGG + chr1_2:28047985-28048004 None:intergenic 40.0%
!! AGCGTAGAAAAGTACTTTGG+TGG + chr1_2:28048002-28048021 None:intergenic 40.0%
!! GAGAGCGTAGAAAAGTACTT+TGG + chr1_2:28048005-28048024 None:intergenic 40.0%
! AGTACTTTTCTACGCTCTCA+AGG - chr1_2:28048006-28048025 Msa0065550:intron 40.0%
!! GAAAGCACTAAGTCATTGTC+AGG + chr1_2:28048315-28048334 None:intergenic 40.0%
! AGTGATTTGCCTAGTCTTCA+TGG - chr1_2:28048422-28048441 Msa0065550:CDS 40.0%
ATAGTTGCACCATGAAGACT+AGG + chr1_2:28048434-28048453 None:intergenic 40.0%
AATGTTGCTAGACCTTCTAC+GGG - chr1_2:28048572-28048591 Msa0065550:intron 40.0%
!! ACAGTTTTAGTGTCTTCAGG+TGG + chr1_2:28048692-28048711 None:intergenic 40.0%
ACCTGAAGACACTAAAACTG+TGG - chr1_2:28048691-28048710 Msa0065550:intron 40.0%
CCTGAAGACACTAAAACTGT+GGG - chr1_2:28048692-28048711 Msa0065550:intron 40.0%
AAGTGCTAAGGAAAATGGCA+TGG - chr1_2:28048775-28048794 Msa0065550:intron 40.0%
GTTTCCACTAGTTATGGTCA+AGG - chr1_2:28048860-28048879 Msa0065550:intron 40.0%
AATGCCTTGACCATAACTAG+TGG + chr1_2:28048867-28048886 None:intergenic 40.0%
CATATTCGTTTGCCAGTTTG+AGG - chr1_2:28049195-28049214 Msa0065550:intron 40.0%
CAATATTCTGGTCCTCAAAC+TGG + chr1_2:28049210-28049229 None:intergenic 40.0%
CAGTTTGAGGACCAGAATAT+TGG - chr1_2:28049208-28049227 Msa0065550:intron 40.0%
TCCATACGTCAACTATTCAG+GGG - chr1_2:28049276-28049295 Msa0065550:intron 40.0%
ACTATTCAGGGGAATCTCTA+TGG - chr1_2:28049287-28049306 Msa0065550:intron 40.0%
!! TTACACAAGAGGCTGTTTCT+AGG + chr1_2:28049422-28049441 None:intergenic 40.0%
GAGTAGGATAGTTGTCTGTA+AGG - chr1_2:28050307-28050326 Msa0065550:intron 40.0%
TGTCTGTAAGGATACAAGCT+TGG - chr1_2:28050319-28050338 Msa0065550:intron 40.0%
!!! ATTTTGGTTTCTGCGCAGTA+TGG - chr1_2:28050476-28050495 Msa0065550:intron 40.0%
TTGTCAACAGTCAATGCTGT+AGG + chr1_2:28050584-28050603 None:intergenic 40.0%
ATCTGACTCTTCACATCAAC+AGG - chr1_2:28050696-28050715 Msa0065550:intron 40.0%
TTATTGGCATCCGAAGTCAT+TGG - chr1_2:28050793-28050812 Msa0065550:intron 40.0%
! GAGAAGGTAGGGATTTTTCT+TGG - chr1_2:28050823-28050842 Msa0065550:intron 40.0%
TCTCACAAGTCAGTTATGTG+GGG + chr1_2:28051340-28051359 None:intergenic 40.0%
CATCTCACAAGTCAGTTATG+TGG + chr1_2:28051342-28051361 None:intergenic 40.0%
!! CATAACTGACTTGTGAGATG+AGG - chr1_2:28051342-28051361 Msa0065550:intron 40.0%
! AGGCCATCTCTTATTTGATG+TGG - chr1_2:28051392-28051411 Msa0065550:intron 40.0%
! GGCCATCTCTTATTTGATGT+GGG - chr1_2:28051393-28051412 Msa0065550:intron 40.0%
GTCCCACATCAAATAAGAGA+TGG + chr1_2:28051398-28051417 None:intergenic 40.0%
ATATGCAATGAGCTCCAACT+TGG - chr1_2:28051700-28051719 Msa0065550:intron 40.0%
GAGATGTGATTCATCCAAGT+TGG + chr1_2:28051717-28051736 None:intergenic 40.0%
!! TAAGTTTTTGGGCTGAAGCA+TGG + chr1_2:28051759-28051778 None:intergenic 40.0%
TGCTTCAGCCCAAAAACTTA+AGG - chr1_2:28051759-28051778 Msa0065550:intron 40.0%
ACATCACTCTATATCACGGA+TGG + chr1_2:28051860-28051879 None:intergenic 40.0%
CAAATAAGTGCCACCATTTC+TGG + chr1_2:28052194-28052213 None:intergenic 40.0%
! GTTGGACGAACATTTTCGTA+TGG - chr1_2:28052322-28052341 Msa0065550:intron 40.0%
TCTCTTCATTTCCTTCCATC+TGG - chr1_2:28052847-28052866 Msa0065550:CDS 40.0%
!! TATGAGAAGTACCAGATGGA+AGG + chr1_2:28052861-28052880 None:intergenic 40.0%
!! CAGTTATGAGAAGTACCAGA+TGG + chr1_2:28052865-28052884 None:intergenic 40.0%
CAATGGTTGACTGCAAATCA+CGG + chr1_2:28052969-28052988 None:intergenic 40.0%
ACCATTGATGCTCTTCAAGA+AGG - chr1_2:28052982-28053001 Msa0065550:intron 40.0%
!! ACCTTCTTGAAGAGCATCAA+TGG + chr1_2:28052986-28053005 None:intergenic 40.0%
CTATGAAAACCCAAACTGCT+GGG + chr1_2:28053032-28053051 None:intergenic 40.0%
TCTATGAAAACCCAAACTGC+TGG + chr1_2:28053033-28053052 None:intergenic 40.0%
TTTCTCTTGGCATTCCAATG+TGG - chr1_2:28053089-28053108 Msa0065550:intron 40.0%
! ATTCCAATGTGGACTGATGA+TGG - chr1_2:28053100-28053119 Msa0065550:intron 40.0%
!! AATGTGGACTGATGATGGTA+GGG - chr1_2:28053105-28053124 Msa0065550:intron 40.0%
GCAAAACATCAGGATTAAGG+AGG - chr1_2:28053168-28053187 Msa0065550:CDS 40.0%
! TAACGGTGCTTTTATGATGG+CGG - chr1_2:28053544-28053563 Msa0065550:intron 40.0%
TGAGTCAGCTACAGTTATGT+GGG + chr1_2:28054107-28054126 None:intergenic 40.0%
ATGAGTCAGCTACAGTTATG+TGG + chr1_2:28054108-28054127 None:intergenic 40.0%
ACTCATAGTATCAGCAGTGT+AGG - chr1_2:28054122-28054141 Msa0065550:intron 40.0%
CTCATAGTATCAGCAGTGTA+GGG - chr1_2:28054123-28054142 Msa0065550:intron 40.0%
GGTAAACCTCACAATAGTGT+AGG - chr1_2:28054144-28054163 Msa0065550:intron 40.0%
GCTTAACCTACACTATTGTG+AGG + chr1_2:28054153-28054172 None:intergenic 40.0%
AATGCTAGCTAGCCATTTGT+TGG - chr1_2:28054246-28054265 Msa0065550:intron 40.0%
TCTACATCTACCGAGGATTT+AGG - chr1_2:28054484-28054503 Msa0065550:intron 40.0%
GTCTGTTAGGTGTTCTTTCA+TGG - chr1_2:28054535-28054554 Msa0065550:intron 40.0%
TTGAGTGACTTTAGCATGCA+AGG + chr1_2:28054579-28054598 None:intergenic 40.0%
AAGTCACTCAAGCATGATTC+TGG - chr1_2:28054588-28054607 Msa0065550:intron 40.0%
AGTCACTCAAGCATGATTCT+GGG - chr1_2:28054589-28054608 Msa0065550:intron 40.0%
ACCCAGAATGTCTTGTACAT+AGG - chr1_2:28054815-28054834 Msa0065550:CDS 40.0%
! TATTTGCCGGTTATGAATGC+TGG + chr1_2:28054922-28054941 None:intergenic 40.0%
ATCACTCTCATCTGATCATG+AGG + chr1_2:28055170-28055189 None:intergenic 40.0%
!! CTTATTTCTGAGGTAGGAGT+TGG - chr1_2:28055206-28055225 Msa0065550:intron 40.0%
! CATTTTACTGTAGCTGGCAT+TGG - chr1_2:28055432-28055451 Msa0065550:CDS 40.0%
CTCAGATGATTCAAATGCCA+AGG + chr1_2:28055479-28055498 None:intergenic 40.0%
!! TTAACTTGCTAGTGGAGTTG+TGG - chr1_2:28055578-28055597 Msa0065550:CDS 40.0%
GATAAAAGCAGGAGATAACG+TGG + chr1_2:28055682-28055701 None:intergenic 40.0%
TCAGAAAGACGGATAAAAGC+AGG + chr1_2:28055693-28055712 None:intergenic 40.0%
CTTAGATCCGATCAGAAAGA+CGG + chr1_2:28055704-28055723 None:intergenic 40.0%
TTAGTGCCAAAAAGCAGCTA+CGG + chr1_2:28055789-28055808 None:intergenic 40.0%
! GTTTTGTCTTGGTTTCGGTT+TGG - chr1_2:28055867-28055886 Msa0065550:CDS 40.0%
! TCTCAATTGTGCTTTTGCTC+AGG - chr1_2:28055936-28055955 Msa0065550:CDS 40.0%
!! ATCTCAGCTATGTTTTGGAC+TGG - chr1_2:28055963-28055982 Msa0065550:CDS 40.0%
GTTTCTTCTCAGTTACCCTT+TGG - chr1_2:28056039-28056058 Msa0065550:intron 40.0%
GAGATAAATCCAGTGCCAAA+GGG + chr1_2:28056057-28056076 None:intergenic 40.0%
TGAGATAAATCCAGTGCCAA+AGG + chr1_2:28056058-28056077 None:intergenic 40.0%
! TTTGCCACAGCTGCAATTTT+TGG - chr1_2:28056153-28056172 Msa0065550:intron 40.0%
!! ATTTGGTATCGATGCTTGAC+TGG + chr1_2:28056210-28056229 None:intergenic 40.0%
ACTTTATGGCCAATGATGTG+TGG - chr1_2:28056666-28056685 Msa0065550:intron 40.0%
CAAACTCAACCACACATCAT+TGG + chr1_2:28056678-28056697 None:intergenic 40.0%
ACAGCAGAAATTGTGTGGTT+AGG + chr1_2:28056789-28056808 None:intergenic 40.0%
ACGAAACAGCAGAAATTGTG+TGG + chr1_2:28056794-28056813 None:intergenic 40.0%
AGATAAACAAGGAGTTGTCC+CGG - chr1_2:28056828-28056847 Msa0065550:intron 40.0%
! AAAGCTCTAATCTTTGGGTC+TGG + chr1_2:28056865-28056884 None:intergenic 40.0%
TCATACGTAACACGAGAATC+TGG + chr1_2:28056941-28056960 None:intergenic 40.0%
AACATTCCGTATGCAGATGA+GGG - chr1_2:28056962-28056981 Msa0065550:intron 40.0%
TATGCAACTGAAACGTTCAC+TGG - chr1_2:28057093-28057112 Msa0065550:intron 40.0%
! ATCGATTTCATTGTCAAGGG+TGG - chr1_2:28057156-28057175 Msa0065550:intron 40.0%
TTGTCAAGGGTGGAAATAGT+TGG - chr1_2:28057166-28057185 Msa0065550:intron 40.0%
! TGGAAATAGTTGGTCTATGC+AGG - chr1_2:28057176-28057195 Msa0065550:intron 40.0%
!! TTAGGTAGTGGAAAGAGTGT+TGG - chr1_2:28057291-28057310 Msa0065550:intron 40.0%
!! TAGGTAGTGGAAAGAGTGTT+GGG - chr1_2:28057292-28057311 Msa0065550:intron 40.0%
AACTAGCAAGCTTCTCTGAT+CGG - chr1_2:28057357-28057376 Msa0065550:intron 40.0%
TCTCTCTCTCTCGATCAGAT+CGG - chr1_2:28045701-28045720 Msa0065550:three_prime_UTR 45.0%
TGGATTCGTTGCAACGTGAA+TGG - chr1_2:28045831-28045850 Msa0065550:three_prime_UTR 45.0%
! GATCCTCCCCTTTTCTCAAA+TGG - chr1_2:28045904-28045923 Msa0065550:three_prime_UTR 45.0%
ATCTCGAAGCTGGAAAACGT+CGG - chr1_2:28045954-28045973 Msa0065550:three_prime_UTR 45.0%
TGGTATGAGGAAATTGAGGG+AGG - chr1_2:28046219-28046238 Msa0065550:exon 45.0%
ATGAGGAAATTGAGGGAGGT+AGG - chr1_2:28046223-28046242 Msa0065550:CDS 45.0%
TTAACAGCATCTGAAGGTGG+AGG - chr1_2:28046539-28046558 Msa0065550:intron 45.0%
! ATAGAACTTCGAGGCTTTGG+AGG - chr1_2:28046623-28046642 Msa0065550:CDS 45.0%
!! TAGAACTTCGAGGCTTTGGA+GGG - chr1_2:28046624-28046643 Msa0065550:CDS 45.0%
GAAACCAGTGTTGTCAATCG+TGG - chr1_2:28047114-28047133 Msa0065550:intron 45.0%
CTAACCACGATTGACAACAC+TGG + chr1_2:28047121-28047140 None:intergenic 45.0%
CGGTTTGTCAAAATTCCGCT+AGG - chr1_2:28047239-28047258 Msa0065550:intron 45.0%
ATACTAGCGCTATAGCCTAG+CGG + chr1_2:28047257-28047276 None:intergenic 45.0%
! TTGGCTTCCCTGTTCAGTTT+TGG - chr1_2:28047355-28047374 Msa0065550:intron 45.0%
AGAATTCTGAACAGTGCCAG+AGG + chr1_2:28047602-28047621 None:intergenic 45.0%
!!! AGGCTGTTTCTGATTTTGGC+TGG + chr1_2:28047629-28047648 None:intergenic 45.0%
!!! GCACAGGCTGTTTCTGATTT+TGG + chr1_2:28047633-28047652 None:intergenic 45.0%
GATGGAGTTACCACATCTGA+TGG - chr1_2:28047682-28047701 Msa0065550:CDS 45.0%
GTTACCACATCTGATGGCAT+TGG - chr1_2:28047688-28047707 Msa0065550:CDS 45.0%
TCCAGCCTTCATGGAATGAA+TGG - chr1_2:28048060-28048079 Msa0065550:intron 45.0%
TCCATTCATTCCATGAAGGC+TGG + chr1_2:28048064-28048083 None:intergenic 45.0%
GGCTTCCATTCATTCCATGA+AGG + chr1_2:28048068-28048087 None:intergenic 45.0%
GCCGACAAATTCTAGCACTT+TGG - chr1_2:28048203-28048222 Msa0065550:intron 45.0%
! TTGGATAGTGGCTCTTCACA+TGG - chr1_2:28048222-28048241 Msa0065550:intron 45.0%
TAGTGGCTCTTCACATGGTT+CGG - chr1_2:28048227-28048246 Msa0065550:intron 45.0%
!! TCTTCACATGGTTCGGTTTC+TGG - chr1_2:28048234-28048253 Msa0065550:intron 45.0%
ATGTTGCTAGACCTTCTACG+GGG - chr1_2:28048573-28048592 Msa0065550:intron 45.0%
TAAAATGGAGACCCCGTAGA+AGG + chr1_2:28048587-28048606 None:intergenic 45.0%
TCAAGCAGCAATGACACATC+AGG - chr1_2:28048647-28048666 Msa0065550:intron 45.0%
CAAGCAGCAATGACACATCA+GGG - chr1_2:28048648-28048667 Msa0065550:intron 45.0%
TAGTGTCTTCAGGTGGCTTA+TGG + chr1_2:28048685-28048704 None:intergenic 45.0%
!! CCCACAGTTTTAGTGTCTTC+AGG + chr1_2:28048695-28048714 None:intergenic 45.0%
CACACCGATGATAAGTGCTA+AGG - chr1_2:28048763-28048782 Msa0065550:intron 45.0%
CAGGTGGTTTCCACTAGTTA+TGG - chr1_2:28048854-28048873 Msa0065550:intron 45.0%
TCCCCTGAATAGTTGACGTA+TGG + chr1_2:28049280-28049299 None:intergenic 45.0%
ACAACTTTACCGTTGCACCA+AGG + chr1_2:28049367-28049386 None:intergenic 45.0%
GCACGATACACCAAAATGGT+GGG - chr1_2:28049460-28049479 Msa0065550:intron 45.0%
!! AAAATGGTGGGACCTTTTCC+CGG - chr1_2:28049472-28049491 Msa0065550:intron 45.0%
TCGTCAATACCAATGGCAAG+TGG + chr1_2:28050137-28050156 None:intergenic 45.0%
GCAAGAGATCAAAGCACAAC+TGG - chr1_2:28050419-28050438 Msa0065550:intron 45.0%
CAGATATCTACCGAAGACAG+AGG + chr1_2:28050681-28050700 None:intergenic 45.0%
! TTCACATCAACAGGTTGAGC+TGG - chr1_2:28050705-28050724 Msa0065550:intron 45.0%
TGATGAGCGTGCCAAGTTAT+TGG - chr1_2:28050777-28050796 Msa0065550:intron 45.0%
GACTTCGGATGCCAATAACT+TGG + chr1_2:28050791-28050810 None:intergenic 45.0%
!! ATCCGAAGTCATTGGCTTAG+AGG - chr1_2:28050801-28050820 Msa0065550:intron 45.0%
CTCCTCTAAGCCAATGACTT+CGG + chr1_2:28050806-28050825 None:intergenic 45.0%
!! AGTCATTGGCTTAGAGGAGA+AGG - chr1_2:28050807-28050826 Msa0065550:intron 45.0%
! ATTGGCTTAGAGGAGAAGGT+AGG - chr1_2:28050811-28050830 Msa0065550:intron 45.0%
TTGGCTTAGAGGAGAAGGTA+GGG - chr1_2:28050812-28050831 Msa0065550:intron 45.0%
CAGTTATGTGGGGTTGTGTT+AGG + chr1_2:28051330-28051349 None:intergenic 45.0%
! AGCATGGACATTGCATTGGT+CGG + chr1_2:28051743-28051762 None:intergenic 45.0%
CTGAAGCATGGACATTGCAT+TGG + chr1_2:28051747-28051766 None:intergenic 45.0%
CTCTATATCACGGATGGAAG+TGG + chr1_2:28051854-28051873 None:intergenic 45.0%
GTGACACTTGTGTCTGTGTT+TGG + chr1_2:28051904-28051923 None:intergenic 45.0%
GTTAAAGCTTGAGAAGCAGC+TGG - chr1_2:28052058-28052077 Msa0065550:intron 45.0%
!! CCATTTCTGGCAGAAACCAT+GGG + chr1_2:28052181-28052200 None:intergenic 45.0%
!! ACCATTTCTGGCAGAAACCA+TGG + chr1_2:28052182-28052201 None:intergenic 45.0%
ATGGTTTCTGCCAGAAATGG+TGG - chr1_2:28052181-28052200 Msa0065550:intron 45.0%
ACCGAGTGCATATCAGAGTT+AGG - chr1_2:28052405-28052424 Msa0065550:intron 45.0%
CCCTAACTCTGATATGCACT+CGG + chr1_2:28052409-28052428 None:intergenic 45.0%
CCGAGTGCATATCAGAGTTA+GGG - chr1_2:28052406-28052425 Msa0065550:intron 45.0%
!! AATCACGGCGGTCTTTTTCA+AGG + chr1_2:28052954-28052973 None:intergenic 45.0%
CTACCATCATCAGTCCACAT+TGG + chr1_2:28053106-28053125 None:intergenic 45.0%
!! CAATGTGGACTGATGATGGT+AGG - chr1_2:28053104-28053123 Msa0065550:intron 45.0%
!! GGAGGGTTGTTAACTTGCAA+TGG - chr1_2:28053186-28053205 Msa0065550:CDS 45.0%
ATTGAACCCACACAAAGTGG+TGG - chr1_2:28053421-28053440 Msa0065550:intron 45.0%
TTGAACCCACACAAAGTGGT+GGG - chr1_2:28053422-28053441 Msa0065550:intron 45.0%
TATGTCCCACCACTTTGTGT+GGG + chr1_2:28053430-28053449 None:intergenic 45.0%
GTTCTGCGACACATTGTTGT+AGG - chr1_2:28053614-28053633 Msa0065550:CDS 45.0%
ACATTCAGGACCTACACCAT+TGG - chr1_2:28053755-28053774 Msa0065550:intron 45.0%
!! ATCAGAAGCACCAATGGTGT+AGG + chr1_2:28053768-28053787 None:intergenic 45.0%
GTGCAAGCTCTCAGTTAGTT+AGG - chr1_2:28054043-28054062 Msa0065550:intron 45.0%
TAGGCTGTGCTTTGCAATTG+CGG - chr1_2:28054062-28054081 Msa0065550:intron 45.0%
! GTTGCTGTCTAAGGTACGAA+AGG - chr1_2:28054414-28054433 Msa0065550:intron 45.0%
! TCTAAGGTACGAAAGGCTTC+AGG - chr1_2:28054421-28054440 Msa0065550:intron 45.0%
GTACGAAAGGCTTCAGGATT+CGG - chr1_2:28054427-28054446 Msa0065550:intron 45.0%
GTCACTCAAGCATGATTCTG+GGG - chr1_2:28054590-28054609 Msa0065550:intron 45.0%
TGTACAAGACATTCTGGGTC+TGG + chr1_2:28054814-28054833 None:intergenic 45.0%
! TCTGTGTTGGAGTTTGAAGC+AGG + chr1_2:28055047-28055066 None:intergenic 45.0%
AAACAGAGACGAAGCTGGAT+TGG - chr1_2:28055257-28055276 Msa0065550:intron 45.0%
AAAAGCAGGAGATAACGTGG+AGG + chr1_2:28055679-28055698 None:intergenic 45.0%
GAGACCAAAAATTGCAGCTG+TGG + chr1_2:28056160-28056179 None:intergenic 45.0%
GAACATTCCGTATGCAGATG+AGG - chr1_2:28056961-28056980 Msa0065550:intron 45.0%
TCATCACCCTCATCTGCATA+CGG + chr1_2:28056971-28056990 None:intergenic 45.0%
!! TAGTGGAAAGAGTGTTGGGA+TGG - chr1_2:28057296-28057315 Msa0065550:intron 45.0%
! GTTTTCCAGTATGCCAACCA+AGG - chr1_2:28057446-28057465 Msa0065550:intron 45.0%
CAACCCAGATCCATGAGTAA+CGG - chr1_2:28057487-28057506 Msa0065550:intron 45.0%
AACCCAGATCCATGAGTAAC+GGG - chr1_2:28057488-28057507 Msa0065550:intron 45.0%
! AGGCTACCAAGAAGCTTTGT+GGG - chr1_2:28057753-28057772 Msa0065550:five_prime_UTR 45.0%
! ACCAAGAAGCTTTGTGGGAA+CGG - chr1_2:28057758-28057777 Msa0065550:five_prime_UTR 45.0%
TGCATGCGTTACAGTCAATC+AGG + chr1_2:28058034-28058053 None:intergenic 45.0%
!! TTAATAAATGAATAATAATT+TGG + chr1_2:28045579-28045598 None:intergenic 5.0%
!!! ATTATTTTTTTTGAAAAATT+CGG - chr1_2:28051163-28051182 Msa0065550:intron 5.0%
!!! TATTTTTAATGTTTTTTTTA+GGG + chr1_2:28051240-28051259 None:intergenic 5.0%
!!! ATATTTTTAATGTTTTTTTT+AGG + chr1_2:28051241-28051260 None:intergenic 5.0%
!! TAAATAATCAAAATATTTAA+CGG - chr1_2:28053527-28053546 Msa0065550:intron 5.0%
!!! TTTTTTTTTTTTTATCTTTT+AGG - chr1_2:28056338-28056357 Msa0065550:intron 5.0%
CTCTCTCTCTCGATCAGATC+GGG - chr1_2:28045702-28045721 Msa0065550:three_prime_UTR 50.0%
ACGCCATTTGAGAAAAGGGG+AGG + chr1_2:28045910-28045929 None:intergenic 50.0%
CCGACGCCATTTGAGAAAAG+GGG + chr1_2:28045913-28045932 None:intergenic 50.0%
! CCCCTTTTCTCAAATGGCGT+CGG - chr1_2:28045910-28045929 Msa0065550:three_prime_UTR 50.0%
GCCGACGCCATTTGAGAAAA+GGG + chr1_2:28045914-28045933 None:intergenic 50.0%
AGCCGACGCCATTTGAGAAA+AGG + chr1_2:28045915-28045934 None:intergenic 50.0%
!! AAGCAAGAGCATCTCGAAGC+TGG - chr1_2:28045944-28045963 Msa0065550:three_prime_UTR 50.0%
TCTCGAAGCTGGAAAACGTC+GGG - chr1_2:28045955-28045974 Msa0065550:three_prime_UTR 50.0%
! TGGAGGGACCTTACTAGCTT+CGG - chr1_2:28046640-28046659 Msa0065550:CDS 50.0%
TGTTGGAAGGAACTAGGCCT+AGG - chr1_2:28046992-28047011 Msa0065550:intron 50.0%
TATTTGGGTCTTGCAGCTGG+AGG - chr1_2:28047531-28047550 Msa0065550:intron 50.0%
! ACCACATCTGATGGCATTGG+CGG - chr1_2:28047691-28047710 Msa0065550:CDS 50.0%
TACATCTACCACTAGTCCGG+TGG - chr1_2:28047822-28047841 Msa0065550:intron 50.0%
!! GGTGTTGGTGGATTTCCGTA+TGG - chr1_2:28047967-28047986 Msa0065550:intron 50.0%
ACTAGTCAGTCCAGCCTTCA+TGG - chr1_2:28048051-28048070 Msa0065550:intron 50.0%
!! TCACATGGTTCGGTTTCTGG+AGG - chr1_2:28048237-28048256 Msa0065550:intron 50.0%
!! AACTTAGAGGCGTCTTGCTC+AGG + chr1_2:28048614-28048633 None:intergenic 50.0%
GCAATATTAAGGGGGAGCCT+TGG - chr1_2:28049347-28049366 Msa0065550:intron 50.0%
GTTGTTGTCGCGTGACTGAA+AGG - chr1_2:28049382-28049401 Msa0065550:intron 50.0%
CTGCGCACGATACACCAAAA+TGG - chr1_2:28049456-28049475 Msa0065550:intron 50.0%
CGCACGATACACCAAAATGG+TGG - chr1_2:28049459-28049478 Msa0065550:intron 50.0%
! GGGAAAAGGTCCCACCATTT+TGG + chr1_2:28049473-28049492 None:intergenic 50.0%
TTCTTTGCAACGCGCTCTTG+AGG - chr1_2:28049940-28049959 Msa0065550:intron 50.0%
! ACATCAACAGGTTGAGCTGG+AGG - chr1_2:28050708-28050727 Msa0065550:intron 50.0%
AACCTCTTCATCCGAAACCC+AGG - chr1_2:28051429-28051448 Msa0065550:intron 50.0%
TACCTGGGTTTCGGATGAAG+AGG + chr1_2:28051434-28051453 None:intergenic 50.0%
! TGGACATTGCATTGGTCGGA+TGG + chr1_2:28051739-28051758 None:intergenic 50.0%
CCCATGGTTTCTGCCAGAAA+TGG - chr1_2:28052178-28052197 Msa0065550:intron 50.0%
CGGTGTCCTTCAACACAATC+TGG - chr1_2:28052761-28052780 Msa0065550:intron 50.0%
TGGTTGACTGCAAATCACGG+CGG + chr1_2:28052966-28052985 None:intergenic 50.0%
GTATGTCCCACCACTTTGTG+TGG + chr1_2:28053431-28053450 None:intergenic 50.0%
TCTAGCACTCACTCTCTTCC+TGG + chr1_2:28053465-28053484 None:intergenic 50.0%
! AGATGGCTCTACATCTACCG+AGG - chr1_2:28054477-28054496 Msa0065550:intron 50.0%
!! AGGTGTTGCTCCTTACTGCT+TGG - chr1_2:28055318-28055337 Msa0065550:intron 50.0%
TGACCAAGACAAACCAGCTC+TGG + chr1_2:28055834-28055853 None:intergenic 50.0%
CCTGAGCAAAGTAGCAACTG+AGG + chr1_2:28055903-28055922 None:intergenic 50.0%
!! CCTCAGTTGCTACTTTGCTC+AGG - chr1_2:28055900-28055919 Msa0065550:CDS 50.0%
TCTCAGTTACCCTTTGGCAC+TGG - chr1_2:28056045-28056064 Msa0065550:intron 50.0%
TTGCAGCTGTGGCAAAAGCT+GGG + chr1_2:28056149-28056168 None:intergenic 50.0%
ATTGCAGCTGTGGCAAAAGC+TGG + chr1_2:28056150-28056169 None:intergenic 50.0%
GTATGCAGATGAGGGTGATG+AGG - chr1_2:28056970-28056989 Msa0065550:intron 50.0%
CTTTGCCTTGGTTGGCATAC+TGG + chr1_2:28057454-28057473 None:intergenic 50.0%
!! AATGCGCTGGTTCTTTGCCT+TGG + chr1_2:28057466-28057485 None:intergenic 50.0%
GACCCGTTACTCATGGATCT+GGG + chr1_2:28057493-28057512 None:intergenic 50.0%
TGACCCGTTACTCATGGATC+TGG + chr1_2:28057494-28057513 None:intergenic 50.0%
CTTTGCTGACCCGTTACTCA+TGG + chr1_2:28057500-28057519 None:intergenic 50.0%
TGTTCGTTGCCTCAGTACAC+TGG - chr1_2:28057537-28057556 Msa0065550:intron 50.0%
GAGGCTACCAAGAAGCTTTG+TGG - chr1_2:28057752-28057771 Msa0065550:five_prime_UTR 50.0%
! CCAAGAAGCTTTGTGGGAAC+GGG - chr1_2:28057759-28057778 Msa0065550:five_prime_UTR 50.0%
! CAAGAAGCTTTGTGGGAACG+GGG - chr1_2:28057760-28057779 Msa0065550:five_prime_UTR 50.0%
GGCTCTCTCTCTTCTGTCTC+TGG + chr1_2:28045558-28045577 None:intergenic 55.0%
!! TTCTCAAATGGCGTCGGCTC+AGG - chr1_2:28045916-28045935 Msa0065550:three_prime_UTR 55.0%
GGATTGCACGCAGGGTATAC+CGG + chr1_2:28046469-28046488 None:intergenic 55.0%
AACTCGGAGGATTGCACGCA+GGG + chr1_2:28046477-28046496 None:intergenic 55.0%
TGCGTGCAATCCTCCGAGTT+GGG - chr1_2:28046477-28046496 Msa0065550:intron 55.0%
! TGCAATCCTCCGAGTTGGGT+GGG - chr1_2:28046481-28046500 Msa0065550:intron 55.0%
! GAGAGTTTTGCCACCCATCG+TGG + chr1_2:28046508-28046527 None:intergenic 55.0%
AGTCTTCTTGGCCCGCTCTT+CGG + chr1_2:28047575-28047594 None:intergenic 55.0%
GCCAAGAAGACTGCATCCTC+TGG - chr1_2:28047583-28047602 Msa0065550:intron 55.0%
GCCAGAGGATGCAGTCTTCT+TGG + chr1_2:28047587-28047606 None:intergenic 55.0%
TCCGCCAATGCCATCAGATG+TGG + chr1_2:28047695-28047714 None:intergenic 55.0%
GCGGAGCTGTTACTGACACT+GGG - chr1_2:28047710-28047729 Msa0065550:CDS 55.0%
ATCTACCACTAGTCCGGTGG+AGG - chr1_2:28047825-28047844 Msa0065550:intron 55.0%
! ATGTTCCTCCACCGGACTAG+TGG + chr1_2:28047833-28047852 None:intergenic 55.0%
GGAATTCACACCGGTGGTGT+TGG - chr1_2:28047952-28047971 Msa0065550:intron 55.0%
! ATTCACACCGGTGGTGTTGG+TGG - chr1_2:28047955-28047974 Msa0065550:intron 55.0%
CGGAAATCCACCAACACCAC+CGG + chr1_2:28047965-28047984 None:intergenic 55.0%
GTCGCGTGACTGAAAGGTCA+CGG - chr1_2:28049388-28049407 Msa0065550:intron 55.0%
TCGCGTGACTGAAAGGTCAC+GGG - chr1_2:28049389-28049408 Msa0065550:intron 55.0%
CTAAAGCTCCCGCATACGCA+GGG + chr1_2:28049499-28049518 None:intergenic 55.0%
ACTAAAGCTCCCGCATACGC+AGG + chr1_2:28049500-28049519 None:intergenic 55.0%
CTTCCCTCTGCCTCTGTCTT+CGG - chr1_2:28050668-28050687 Msa0065550:intron 55.0%
CTACCGAAGACAGAGGCAGA+GGG + chr1_2:28050674-28050693 None:intergenic 55.0%
TCTACCGAAGACAGAGGCAG+AGG + chr1_2:28050675-28050694 None:intergenic 55.0%
!!! ACGGCGGTCTTTTTCAAGGC+TGG + chr1_2:28052950-28052969 None:intergenic 55.0%
!! GGACTGATGATGGTAGGGCT+AGG - chr1_2:28053110-28053129 Msa0065550:intron 55.0%
TGGCGGTGTTCTGCCCATAT+TGG - chr1_2:28053561-28053580 Msa0065550:intron 55.0%
TAGTTGCTCTCTGCCAGAGC+TGG - chr1_2:28055818-28055837 Msa0065550:CDS 55.0%
!! CTGCCAGAGCTGGTTTGTCT+TGG - chr1_2:28055828-28055847 Msa0065550:CDS 55.0%
TGCAGCTGTGGCAAAAGCTG+GGG + chr1_2:28056148-28056167 None:intergenic 55.0%
GGAGTTGTCCCGGAAACTTG+AGG - chr1_2:28056838-28056857 Msa0065550:intron 55.0%
GGTCTGGACCTCAAGTTTCC+GGG + chr1_2:28056849-28056868 None:intergenic 55.0%
GGGTCTGGACCTCAAGTTTC+CGG + chr1_2:28056850-28056869 None:intergenic 55.0%
!! CGCTGGTTCTTTGCCTTGGT+TGG + chr1_2:28057462-28057481 None:intergenic 55.0%
! GGATCTGGGTTGAAATGCGC+TGG + chr1_2:28057479-28057498 None:intergenic 55.0%
TCGTTGCCTCAGTACACTGG+AGG - chr1_2:28057540-28057559 Msa0065550:intron 55.0%
CGTTGCCTCAGTACACTGGA+GGG - chr1_2:28057541-28057560 Msa0065550:intron 55.0%
CCCGTTCCCACAAAGCTTCT+TGG + chr1_2:28057762-28057781 None:intergenic 55.0%
AACCTTGCTCATGCTGCGAG+AGG - chr1_2:28057968-28057987 Msa0065550:five_prime_UTR 55.0%
AACCTCTCGCAGCATGAGCA+AGG + chr1_2:28057973-28057992 None:intergenic 55.0%
!! AAATGGCGTCGGCTCAGGTG+AGG - chr1_2:28045921-28045940 Msa0065550:three_prime_UTR 60.0%
CAACTCGGAGGATTGCACGC+AGG + chr1_2:28046478-28046497 None:intergenic 60.0%
CTGCGTGCAATCCTCCGAGT+TGG - chr1_2:28046476-28046495 Msa0065550:intron 60.0%
! GTGCAATCCTCCGAGTTGGG+TGG - chr1_2:28046480-28046499 Msa0065550:intron 60.0%
CATCGTGGTCCCACCCAACT+CGG + chr1_2:28046493-28046512 None:intergenic 60.0%
GAGTTGGGTGGGACCACGAT+GGG - chr1_2:28046492-28046511 Msa0065550:intron 60.0%
GGCGGAGCTGTTACTGACAC+TGG - chr1_2:28047709-28047728 Msa0065550:CDS 60.0%
! AAGGGGGAGCCTTGGTGCAA+CGG - chr1_2:28049355-28049374 Msa0065550:intron 60.0%
CATACGCAGGGTCCGGGAAA+AGG + chr1_2:28049487-28049506 None:intergenic 60.0%
TTTCCCGGACCCTGCGTATG+CGG - chr1_2:28049487-28049506 Msa0065550:intron 60.0%
!! CTTCGTTTTGACGGCCCACC+AGG + chr1_2:28057337-28057356 None:intergenic 60.0%
TCACGCCCTCCAGTGTACTG+AGG + chr1_2:28057549-28057568 None:intergenic 60.0%
! CGAGTTGGGTGGGACCACGA+TGG - chr1_2:28046491-28046510 Msa0065550:intron 65.0%
TTGGGTGGGACCACGATGGG+TGG - chr1_2:28046495-28046514 Msa0065550:intron 65.0%
TTCCCGGACCCTGCGTATGC+GGG - chr1_2:28049488-28049507 Msa0065550:intron 65.0%
AGCTGGGGCCAGACCGCAAT+TGG + chr1_2:28056133-28056152 None:intergenic 65.0%
CGTGGTCCCACCCAACTCGG+AGG + chr1_2:28046490-28046509 None:intergenic 70.0%
CTCCCGCATACGCAGGGTCC+GGG + chr1_2:28049493-28049512 None:intergenic 70.0%
GCTCCCGCATACGCAGGGTC+CGG + chr1_2:28049494-28049513 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 28045540 28058055 28045540 ID=Msa0065550;Name=Msa0065550
chr1_2 mRNA 28045540 28058055 28045540 ID=Msa0065550-mRNA-1;Parent=Msa0065550;Name=Msa0065550-mRNA-1;_AED=0.11;_eAED=0.11;_QI=363|0.8|0.87|0.87|0.8|0.75|16|680|812
chr1_2 exon 28045540 28046300 28045540 ID=Msa0065550-mRNA-1:exon:9658;Parent=Msa0065550-mRNA-1
chr1_2 exon 28046604 28046768 28046604 ID=Msa0065550-mRNA-1:exon:9657;Parent=Msa0065550-mRNA-1
chr1_2 exon 28046840 28046846 28046840 ID=Msa0065550-mRNA-1:exon:9656;Parent=Msa0065550-mRNA-1
chr1_2 exon 28047638 28047774 28047638 ID=Msa0065550-mRNA-1:exon:9655;Parent=Msa0065550-mRNA-1
chr1_2 exon 28048082 28048150 28048082 ID=Msa0065550-mRNA-1:exon:9654;Parent=Msa0065550-mRNA-1
chr1_2 exon 28048378 28048562 28048378 ID=Msa0065550-mRNA-1:exon:9653;Parent=Msa0065550-mRNA-1
chr1_2 exon 28049090 28049191 28049090 ID=Msa0065550-mRNA-1:exon:9652;Parent=Msa0065550-mRNA-1
chr1_2 exon 28050592 28050659 28050592 ID=Msa0065550-mRNA-1:exon:9651;Parent=Msa0065550-mRNA-1
chr1_2 exon 28051484 28051560 28051484 ID=Msa0065550-mRNA-1:exon:9650;Parent=Msa0065550-mRNA-1
chr1_2 exon 28052767 28052877 28052767 ID=Msa0065550-mRNA-1:exon:9649;Parent=Msa0065550-mRNA-1
chr1_2 exon 28053155 28053220 28053155 ID=Msa0065550-mRNA-1:exon:9648;Parent=Msa0065550-mRNA-1
chr1_2 exon 28053565 28053684 28053565 ID=Msa0065550-mRNA-1:exon:9647;Parent=Msa0065550-mRNA-1
chr1_2 exon 28054739 28055223 28054739 ID=Msa0065550-mRNA-1:exon:9646;Parent=Msa0065550-mRNA-1
chr1_2 exon 28055337 28056048 28055337 ID=Msa0065550-mRNA-1:exon:9645;Parent=Msa0065550-mRNA-1
chr1_2 exon 28057619 28057899 28057619 ID=Msa0065550-mRNA-1:exon:9644;Parent=Msa0065550-mRNA-1
chr1_2 exon 28057920 28058055 28057920 ID=Msa0065550-mRNA-1:exon:9643;Parent=Msa0065550-mRNA-1
chr1_2 five_prime_UTR 28057920 28058055 28057920 ID=Msa0065550-mRNA-1:five_prime_utr;Parent=Msa0065550-mRNA-1
chr1_2 five_prime_UTR 28057673 28057899 28057673 ID=Msa0065550-mRNA-1:five_prime_utr;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28057619 28057672 28057619 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28055337 28056048 28055337 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28054739 28055223 28054739 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28053565 28053684 28053565 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28053155 28053220 28053155 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28052767 28052877 28052767 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28051484 28051560 28051484 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28050592 28050659 28050592 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28049090 28049191 28049090 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28048378 28048562 28048378 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28048082 28048150 28048082 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28047638 28047774 28047638 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28046840 28046846 28046840 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28046604 28046768 28046604 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 CDS 28046220 28046300 28046220 ID=Msa0065550-mRNA-1:cds;Parent=Msa0065550-mRNA-1
chr1_2 three_prime_UTR 28045540 28046219 28045540 ID=Msa0065550-mRNA-1:three_prime_utr;Parent=Msa0065550-mRNA-1
Gene Sequence

>Msa0065550

ATGGCGTCGGCTCAGGTGAGGAAGCAAGAGCATCTCGAAGCTGGAAAACGTCGGCTGGAGGAGTTTCGTAAAAAGAAAGCCGAAGAGCGGGCCAAGAAGACTGCATCCTCTGGCACTGTTCAGAATTCTAAAGCCAGCCAAAATCAGAAACAGCCTGTGCAAGTTGAAAATGTTCGAGTTAATGAGTTAGATGGAGTTACCACATCTGATGGCATTGGCGGAGCTGTTACTGACACTGGGACAAGTAGCCAGAATGTGAATTTGTTTAACCAAAGTAGTAATCAAGGGTCTTTAGCTGGTGCAAGTAGTCTTGTGAGAAATGATCTTAATACATCTACCACTAGTCCGGTGGAGGAACATTCAGATATTGATGAAGGTAAAAGATACAATGCTTCTACTTTTATTACATCTGAAGATGTTAGTCAAAATAGTGACGCAAATGAAACAAATGATATATATGGAATTCACACCGGTGGTGTTGGTGGATTTCCGTATGGAACAACAAACCACCAAAGTACTTTTCTACGCTCTCAAGGAAGTCAAGAGTTTGATAACAGTACTAGTCAGTCCAGCCTTCATGGAATGAATGGAAGCCAGCCAAACAAGAGTAACAATTCTGTGAAGGATTATGCAGTTACTGATGGCTCTTCTCCTTACTTTCCGTCAAAAATCATACGTGAGAACTCTGTTGATTCACTACAGAAAGCTAAGCCGACAAATTCTAGCACTTTGGATAGTGGCTCTTCACATGGTTCGGTTTCTGGAGGCTTCAGTGATTCTATAAGTTCTATGTTTAGAGAGACCATTAGATCTGATAGTGATTTGCCTAGTCTTCATGGTGCAACTATACCTAAATATGATTCCATTGGTTATGAAGTGAGGAATTCCTCTAACCATTCACCAATAAATTCAACATCAACGGAATCAAGTTCTAGAAAGTCACGTCCATCTTTTCTTGATTCTCTAAATGTTGCTAGACCTTCTACGGGGTCTCCATTTTATCAACCTGAGCAAGACGCCTCTAAGTTTAGTCATTTAGAATCAAGCAGCAATGACACATCAGGGTCTACTTATTTCCATAAGCCACCTGAAGACACTAAAACTGTGGGACTTTTCTCAAATCATACAACTGCTCCAGTTTTTAGTAATAATCAGGACACACCGATGATAAGTGCTAAGGAAAATGGCATGGAGAAGAAGCACGACTTTTACTCATCTTCACATAATGAAGACTTTTCAACTTTAGAACAGCATATTGAAGATCTAACACAAGAAAAATTTTCTTTGCAACGCGCTCTTGAGGCTTCTCGAGTTTTAGCTGAGTCACTAGCTACTGAAAATTCATCTTTGACTGAAAATTATAATCATCAGAGAAGTGTTGTCAATCAATTGAAATCAGAAATGGAGAACTTACAGCAAGAGATCAAAGCACAACTGGTTGAGCTGGAGGCTATCAAGAGTGAATATACAAATGTGCAACTTGAGTGTAATGCAGCTGATGAGCGTGCCAAGTTATTGGCATCCGAAGTCATTGGCTTAGAGGAGAAGGCACTCAGACTAAGATCAAATGAGTTAAAGCTTGAGAAGCAGCTGGAAATTGAACAAGCAGAAATTTCTTCATACAGAAAGAAAATGTCCAGCCTTGAAAAAGACCGCCGTGATTTGCAGTCAACCATTGATGCTCTTCAAGAAGAAAAGAAGATGTTGCTGTCTAAGGTACGAAAGGCTTCAGGATTCGGAAAACCTGAGAATAAAACAAGTAAAAGAGATGGCTCTACATCTACCGAGGATTTAGTGAGTGAAGATCCTGCTTCAAACTCCAACACAGAAATCAATGACAATGCTGCTGTTCGTGATGCTGAAACATCTAGTTTGTCCATAGTTCCTGAAACTACACATTCATCTTTTGGAGTTTCTCCTGTGAATATTCCTCATGATCAGATGAGAGTGATTGAGAACATTAATGCACTTATTTCTGAGCTGGCATTGGAGAAAGAAGAATTGATGAAATCCTTGGCATTTGAATCATCTGAGAGTTCAAGAATGAAGTTGCTCTCTGCCAGAGCTGGTTTGTCTTGGTCATTGTTAGATTCTAGTTTTGTCTTGGTTTCGGTTTGGCACCTTTTTTCCTCAGTTGCTACTTTGCTCAGGTTTAATCTCTCTGTCTCAATTGTGCTTTTGCTCAGAATCCTGGAGATAAACAAGGAGTTGTCCCGGAAACTTGAGGTCCAGACCCAAAGATTAGAGCTTTTGACTACTCAAAACATGGTTAATGGAAATATTGATAATATTTCGACAAAACAACCAGATTCTCGTGTTACGTATGAGAACATTCCGTATGCAGATGAGGGTGATGAGGTAGTGGAAAGAGTGTTGGGATGGATTATGAAGCTATTTCCTGGTGGGCCGTCAAAACGAAGAACTAGCAAGCTTCTCTGA
Protein sequence

>Msa0065550

MASAQVRKQEHLEAGKRRLEEFRKKKAEERAKKTASSGTVQNSKASQNQKQPVQVENVRVNELDGVTTSDGIGGAVTDTGTSSQNVNLFNQSSNQGSLAGASSLVRNDLNTSTTSPVEEHSDIDEGKRYNASTFITSEDVSQNSDANETNDIYGIHTGGVGGFPYGTTNHQSTFLRSQGSQEFDNSTSQSSLHGMNGSQPNKSNNSVKDYAVTDGSSPYFPSKIIRENSVDSLQKAKPTNSSTLDSGSSHGSVSGGFSDSISSMFRETIRSDSDLPSLHGATIPKYDSIGYEVRNSSNHSPINSTSTESSSRKSRPSFLDSLNVARPSTGSPFYQPEQDASKFSHLESSSNDTSGSTYFHKPPEDTKTVGLFSNHTTAPVFSNNQDTPMISAKENGMEKKHDFYSSSHNEDFSTLEQHIEDLTQEKFSLQRALEASRVLAESLATENSSLTENYNHQRSVVNQLKSEMENLQQEIKAQLVELEAIKSEYTNVQLECNAADERAKLLASEVIGLEEKALRLRSNELKLEKQLEIEQAEISSYRKKMSSLEKDRRDLQSTIDALQEEKKMLLSKVRKASGFGKPENKTSKRDGSTSTEDLVSEDPASNSNTEINDNAAVRDAETSSLSIVPETTHSSFGVSPVNIPHDQMRVIENINALISELALEKEELMKSLAFESSESSRMKLLSARAGLSWSLLDSSFVLVSVWHLFSSVATLLRFNLSVSIVLLLRILEINKELSRKLEVQTQRLELLTTQNMVNGNIDNISTKQPDSRVTYENIPYADEGDEVVERVLGWIMKLFPGGPSKRRTSKLL*