Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1346740 | XP_003617132.2 | 96.800 | 500 | 13 | 3 | 1 | 500 | 1 | 497 | 0.0 | 962 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1346740 | sp|O80678|UBA2B_ARATH | 48.062 | 516 | 185 | 16 | 1 | 499 | 1 | 450 | 4.50e-129 | 385 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1346740 | G7K7P5 | 96.800 | 500 | 13 | 3 | 1 | 500 | 1 | 497 | 0.0 | 962 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0003220 | Msa1346740 | 0.806051 | 9.923325e-50 | -8.615850e-47 |
Msa0069330 | Msa1346740 | 0.811450 | 6.958664e-51 | -8.615850e-47 |
Msa0074750 | Msa1346740 | 0.801987 | 6.946978e-49 | -8.615850e-47 |
Msa0079920 | Msa1346740 | 0.813037 | 3.134725e-51 | -8.615850e-47 |
Msa0104550 | Msa1346740 | 0.809576 | 1.767020e-50 | -8.615850e-47 |
Msa1346740 | Msa1356610 | 0.842675 | 2.237273e-58 | -8.615850e-47 |
Msa1346740 | Msa1376650 | 0.812929 | 3.310249e-51 | -8.615850e-47 |
Msa1346740 | Msa1377800 | 0.812780 | 3.567904e-51 | -8.615850e-47 |
Msa1346740 | Msa1421560 | 0.802525 | 5.383927e-49 | -8.615850e-47 |
Msa1346740 | Msa1443300 | 0.803613 | 3.206749e-49 | -8.615850e-47 |
Msa1346740 | Msa1443310 | 0.803949 | 2.730470e-49 | -8.615850e-47 |
Msa1346740 | Msa1450720 | 0.830283 | 3.204146e-55 | -8.615850e-47 |
Msa1346740 | Msa1458810 | 0.821687 | 3.535962e-53 | -8.615850e-47 |
Msa0734960 | Msa1346740 | 0.812256 | 4.645658e-51 | -8.615850e-47 |
Msa0740500 | Msa1346740 | 0.814491 | 1.499739e-51 | -8.615850e-47 |
Msa0752460 | Msa1346740 | 0.826924 | 2.076756e-54 | -8.615850e-47 |
Msa0752700 | Msa1346740 | 0.806055 | 9.905177e-50 | -8.615850e-47 |
Msa0788120 | Msa1346740 | 0.815283 | 1.000813e-51 | -8.615850e-47 |
Msa0790400 | Msa1346740 | 0.806454 | 8.161325e-50 | -8.615850e-47 |
Msa0127040 | Msa1346740 | 0.812846 | 3.452006e-51 | -8.615850e-47 |
Msa0131700 | Msa1346740 | 0.827253 | 1.732720e-54 | -8.615850e-47 |
Msa0140300 | Msa1346740 | 0.811869 | 5.642987e-51 | -8.615850e-47 |
Msa0169610 | Msa1346740 | 0.835388 | 1.727822e-56 | -8.615850e-47 |
Msa1254620 | Msa1346740 | 0.802686 | 4.987117e-49 | -8.615850e-47 |
Msa1280560 | Msa1346740 | 0.817194 | 3.741841e-52 | -8.615850e-47 |
Msa0381000 | Msa1346740 | 0.805258 | 1.456184e-49 | -8.615850e-47 |
Msa0381080 | Msa1346740 | 0.801925 | 7.152816e-49 | -8.615850e-47 |
Msa1036740 | Msa1346740 | 0.805979 | 1.027445e-49 | -8.615850e-47 |
Msa1072600 | Msa1346740 | 0.809385 | 1.942402e-50 | -8.615850e-47 |
Msa1077070 | Msa1346740 | 0.805787 | 1.127879e-49 | -8.615850e-47 |
Msa0260620 | Msa1346740 | 0.807245 | 5.554550e-50 | -8.615850e-47 |
Msa0281360 | Msa1346740 | 0.803778 | 2.963616e-49 | -8.615850e-47 |
Msa0307850 | Msa1346740 | 0.808264 | 3.373229e-50 | -8.615850e-47 |
Msa0307860 | Msa1346740 | 0.821156 | 4.690265e-53 | -8.615850e-47 |
Msa1122780 | Msa1346740 | 0.819670 | 1.028286e-52 | -8.615850e-47 |
Msa1123350 | Msa1346740 | 0.802143 | 6.451860e-49 | -8.615850e-47 |
Msa1178050 | Msa1346740 | 0.812566 | 3.975042e-51 | -8.615850e-47 |
Msa1201640 | Msa1346740 | 0.830292 | 3.188295e-55 | -8.615850e-47 |
Msa0504780 | Msa1346740 | 0.811367 | 7.252623e-51 | -8.615850e-47 |
Msa0518960 | Msa1346740 | 0.804847 | 1.775153e-49 | -8.615850e-47 |
Msa0864420 | Msa1346740 | 0.800217 | 1.598235e-48 | -8.615850e-47 |
Msa0970530 | Msa1346740 | 0.818457 | 1.940964e-52 | -8.615850e-47 |
Msa0970600 | Msa1346740 | 0.818944 | 1.504489e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1346740 | MtrunA17_Chr5g0440831 | 96.800 | 500 | 13 | 3 | 1 | 500 | 1 | 497 | 0.0 | 962 |
Msa1346740 | MtrunA17_Chr7g0255011 | 52.357 | 403 | 145 | 9 | 121 | 494 | 82 | 466 | 1.67e-109 | 334 |
Msa1346740 | MtrunA17_Chr8g0360551 | 46.341 | 246 | 119 | 5 | 99 | 342 | 12 | 246 | 3.85e-60 | 204 |
Msa1346740 | MtrunA17_Chr4g0045921 | 43.049 | 223 | 118 | 1 | 120 | 342 | 30 | 243 | 1.13e-58 | 197 |
Msa1346740 | MtrunA17_Chr3g0144311 | 40.625 | 96 | 52 | 1 | 162 | 257 | 25 | 115 | 1.71e-18 | 85.9 |
Msa1346740 | MtrunA17_Chr1g0186351 | 24.265 | 272 | 184 | 5 | 161 | 415 | 1 | 267 | 2.02e-18 | 87.8 |
Msa1346740 | MtrunA17_Chr2g0290191 | 25.000 | 192 | 120 | 4 | 161 | 338 | 1 | 182 | 1.00e-16 | 82.8 |
Msa1346740 | MtrunA17_Chr5g0447761 | 25.532 | 282 | 158 | 10 | 167 | 420 | 7 | 264 | 1.80e-16 | 82.0 |
Msa1346740 | MtrunA17_Chr6g0449481 | 26.163 | 172 | 118 | 3 | 167 | 337 | 46 | 209 | 3.33e-16 | 80.5 |
Msa1346740 | MtrunA17_Chr5g0426311 | 40.741 | 81 | 48 | 0 | 162 | 242 | 12 | 92 | 8.47e-16 | 77.8 |
Msa1346740 | MtrunA17_Chr8g0346011 | 40.964 | 83 | 49 | 0 | 162 | 244 | 33 | 115 | 3.67e-15 | 76.3 |
Msa1346740 | MtrunA17_Chr3g0101061 | 24.590 | 183 | 120 | 3 | 167 | 338 | 41 | 216 | 1.11e-14 | 76.6 |
Msa1346740 | MtrunA17_Chr7g0276531 | 38.554 | 83 | 51 | 0 | 162 | 244 | 14 | 96 | 1.75e-14 | 73.6 |
Msa1346740 | MtrunA17_Chr3g0127751 | 37.931 | 87 | 54 | 0 | 162 | 248 | 22 | 108 | 2.47e-14 | 72.8 |
Msa1346740 | MtrunA17_Chr4g0017401 | 38.554 | 83 | 51 | 0 | 162 | 244 | 12 | 94 | 2.76e-14 | 73.2 |
Msa1346740 | MtrunA17_Chr5g0402191 | 24.224 | 161 | 114 | 3 | 166 | 326 | 4 | 156 | 4.82e-14 | 73.9 |
Msa1346740 | MtrunA17_Chr3g0120721 | 24.375 | 160 | 113 | 2 | 167 | 326 | 19 | 170 | 2.10e-13 | 71.6 |
Msa1346740 | MtrunA17_Chr8g0375101 | 23.602 | 161 | 115 | 4 | 166 | 326 | 4 | 156 | 3.57e-13 | 70.9 |
Msa1346740 | MtrunA17_Chr8g0383661 | 28.230 | 209 | 124 | 5 | 147 | 339 | 183 | 381 | 4.47e-13 | 71.6 |
Msa1346740 | MtrunA17_Chr1g0210241 | 38.158 | 76 | 46 | 1 | 167 | 241 | 8 | 83 | 4.82e-12 | 66.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1346740 | AT2G41060.1 | 48.062 | 516 | 185 | 16 | 1 | 499 | 1 | 450 | 4.57e-130 | 385 |
Msa1346740 | AT2G41060.3 | 48.062 | 516 | 185 | 16 | 1 | 499 | 1 | 450 | 4.57e-130 | 385 |
Msa1346740 | AT2G41060.2 | 48.062 | 516 | 185 | 16 | 1 | 499 | 1 | 450 | 4.57e-130 | 385 |
Msa1346740 | AT3G56860.9 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.11 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.8 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.5 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.7 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.2 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.6 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.10 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.3 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.1 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G56860.4 | 55.932 | 413 | 131 | 12 | 114 | 500 | 91 | 478 | 6.96e-129 | 384 |
Msa1346740 | AT3G15010.1 | 44.889 | 225 | 120 | 1 | 119 | 343 | 28 | 248 | 9.47e-61 | 205 |
Msa1346740 | AT3G15010.2 | 44.889 | 225 | 120 | 1 | 119 | 343 | 28 | 248 | 9.47e-61 | 205 |
Msa1346740 | AT2G22090.1 | 48.462 | 130 | 67 | 0 | 119 | 248 | 57 | 186 | 3.15e-35 | 135 |
Msa1346740 | AT2G22090.1 | 40.000 | 90 | 54 | 0 | 258 | 347 | 100 | 189 | 7.16e-13 | 70.1 |
Msa1346740 | AT2G22090.2 | 49.606 | 127 | 64 | 0 | 119 | 245 | 57 | 183 | 4.67e-35 | 134 |
Msa1346740 | AT2G22090.2 | 40.000 | 90 | 54 | 0 | 258 | 347 | 100 | 189 | 7.24e-13 | 70.5 |
Msa1346740 | AT2G22100.1 | 44.681 | 141 | 71 | 1 | 113 | 253 | 110 | 243 | 2.17e-33 | 130 |
Msa1346740 | AT2G19380.1 | 45.802 | 131 | 71 | 0 | 115 | 245 | 357 | 487 | 1.08e-31 | 129 |
Msa1346740 | AT1G76460.1 | 42.424 | 99 | 50 | 2 | 162 | 254 | 20 | 117 | 1.12e-17 | 84.0 |
Msa1346740 | AT1G20880.2 | 43.373 | 83 | 47 | 0 | 162 | 244 | 20 | 102 | 1.49e-17 | 83.2 |
Msa1346740 | AT1G20880.3 | 43.373 | 83 | 47 | 0 | 162 | 244 | 20 | 102 | 1.49e-17 | 83.2 |
Msa1346740 | AT1G20880.1 | 43.373 | 83 | 47 | 0 | 162 | 244 | 20 | 102 | 1.49e-17 | 83.2 |
Msa1346740 | AT5G40490.1 | 26.163 | 172 | 118 | 2 | 167 | 337 | 43 | 206 | 4.51e-17 | 84.0 |
Msa1346740 | AT1G22330.1 | 40.000 | 90 | 53 | 1 | 162 | 250 | 13 | 102 | 4.92e-16 | 79.0 |
Msa1346740 | AT1G22330.1 | 32.075 | 106 | 66 | 1 | 255 | 354 | 10 | 115 | 2.50e-11 | 65.1 |
Msa1346740 | AT3G07810.2 | 25.397 | 189 | 113 | 4 | 167 | 338 | 7 | 184 | 5.35e-16 | 80.9 |
Msa1346740 | AT3G07810.1 | 25.397 | 189 | 113 | 4 | 167 | 338 | 7 | 184 | 6.66e-16 | 80.5 |
Msa1346740 | AT1G17640.2 | 27.564 | 156 | 108 | 3 | 167 | 322 | 67 | 217 | 7.89e-16 | 79.7 |
Msa1346740 | AT1G17640.1 | 27.564 | 156 | 108 | 3 | 167 | 322 | 67 | 217 | 7.89e-16 | 79.7 |
Msa1346740 | AT1G17640.3 | 27.564 | 156 | 108 | 3 | 167 | 322 | 67 | 217 | 7.89e-16 | 79.7 |
Msa1346740 | AT4G26650.1 | 25.543 | 184 | 124 | 3 | 167 | 338 | 16 | 198 | 1.53e-15 | 79.3 |
Msa1346740 | AT2G46780.1 | 38.947 | 95 | 58 | 0 | 160 | 254 | 16 | 110 | 1.71e-15 | 78.2 |
Msa1346740 | AT2G46780.2 | 38.947 | 95 | 58 | 0 | 160 | 254 | 16 | 110 | 1.71e-15 | 78.2 |
Msa1346740 | AT4G26650.2 | 25.543 | 184 | 124 | 3 | 167 | 338 | 13 | 195 | 1.71e-15 | 79.3 |
Msa1346740 | AT1G78260.1 | 39.506 | 81 | 49 | 0 | 162 | 242 | 13 | 93 | 2.22e-15 | 77.0 |
Msa1346740 | AT5G55550.5 | 24.576 | 236 | 139 | 7 | 167 | 375 | 7 | 230 | 2.24e-15 | 79.0 |
Msa1346740 | AT5G55550.4 | 24.576 | 236 | 139 | 7 | 167 | 375 | 7 | 230 | 2.24e-15 | 79.0 |
Msa1346740 | AT5G55550.9 | 24.576 | 236 | 139 | 7 | 167 | 375 | 7 | 230 | 2.24e-15 | 79.0 |
Msa1346740 | AT5G55550.7 | 24.576 | 236 | 139 | 7 | 167 | 375 | 7 | 230 | 2.24e-15 | 79.0 |
Msa1346740 | AT5G55550.1 | 24.576 | 236 | 139 | 7 | 167 | 375 | 7 | 230 | 2.24e-15 | 79.0 |
Msa1346740 | AT5G55550.2 | 24.865 | 185 | 121 | 4 | 167 | 338 | 7 | 186 | 3.62e-15 | 78.2 |
Msa1346740 | AT5G55550.3 | 24.865 | 185 | 121 | 4 | 167 | 338 | 7 | 186 | 3.62e-15 | 78.2 |
Msa1346740 | AT5G55550.6 | 24.865 | 185 | 121 | 4 | 167 | 338 | 7 | 186 | 3.62e-15 | 78.2 |
Msa1346740 | AT5G55550.11 | 24.865 | 185 | 121 | 4 | 167 | 338 | 7 | 186 | 3.62e-15 | 78.2 |
Msa1346740 | AT1G78260.2 | 39.506 | 81 | 49 | 0 | 162 | 242 | 13 | 93 | 8.53e-15 | 75.1 |
Msa1346740 | AT5G47620.1 | 23.280 | 189 | 115 | 3 | 167 | 338 | 7 | 182 | 8.73e-15 | 77.0 |
Msa1346740 | AT5G47620.2 | 23.280 | 189 | 115 | 3 | 167 | 338 | 7 | 182 | 8.73e-15 | 77.0 |
Msa1346740 | AT5G47620.5 | 23.280 | 189 | 115 | 3 | 167 | 338 | 7 | 182 | 8.73e-15 | 77.0 |
Msa1346740 | AT4G36960.1 | 24.157 | 178 | 116 | 4 | 166 | 338 | 3 | 166 | 9.28e-15 | 76.3 |
Msa1346740 | AT4G36960.2 | 24.157 | 178 | 116 | 4 | 166 | 338 | 3 | 166 | 9.28e-15 | 76.3 |
Msa1346740 | AT3G06970.1 | 43.590 | 78 | 44 | 0 | 167 | 244 | 13 | 90 | 1.11e-14 | 75.5 |
Msa1346740 | AT1G22910.1 | 40.964 | 83 | 49 | 0 | 162 | 244 | 9 | 91 | 2.20e-14 | 73.6 |
Msa1346740 | AT1G22910.2 | 40.964 | 83 | 49 | 0 | 162 | 244 | 9 | 91 | 2.67e-14 | 73.2 |
Msa1346740 | AT1G22910.3 | 40.964 | 83 | 49 | 0 | 162 | 244 | 9 | 91 | 2.57e-13 | 71.6 |
Msa1346740 | AT5G53680.1 | 36.364 | 99 | 59 | 1 | 160 | 254 | 7 | 105 | 2.60e-13 | 68.6 |
Msa1346740 | AT4G14300.1 | 21.939 | 196 | 125 | 4 | 161 | 338 | 1 | 186 | 4.36e-13 | 71.6 |
Msa1346740 | AT4G14300.2 | 21.939 | 196 | 125 | 4 | 161 | 338 | 1 | 186 | 4.36e-13 | 71.6 |
Msa1346740 | AT2G33410.1 | 22.652 | 181 | 130 | 2 | 167 | 338 | 7 | 186 | 5.19e-13 | 71.2 |
Msa1346740 | AT1G33470.3 | 37.349 | 83 | 52 | 0 | 162 | 244 | 3 | 85 | 5.50e-13 | 69.3 |
Msa1346740 | AT1G33470.2 | 37.349 | 83 | 52 | 0 | 162 | 244 | 3 | 85 | 8.20e-13 | 68.6 |
Msa1346740 | AT1G33470.1 | 37.349 | 83 | 52 | 0 | 162 | 244 | 3 | 85 | 8.48e-13 | 68.6 |
Msa1346740 | AT3G13224.3 | 24.845 | 161 | 115 | 1 | 166 | 326 | 10 | 164 | 1.90e-12 | 68.9 |
Msa1346740 | AT5G40490.2 | 24.823 | 141 | 98 | 1 | 186 | 326 | 45 | 177 | 2.25e-12 | 69.3 |
Msa1346740 | AT3G54770.1 | 38.554 | 83 | 51 | 0 | 162 | 244 | 13 | 95 | 2.63e-12 | 67.4 |
Msa1346740 | AT3G13224.2 | 24.375 | 160 | 115 | 1 | 167 | 326 | 20 | 173 | 2.92e-12 | 68.6 |
Msa1346740 | AT3G54770.3 | 38.554 | 83 | 51 | 0 | 162 | 244 | 13 | 95 | 3.18e-12 | 67.4 |
Msa1346740 | AT5G11412.1 | 36.471 | 85 | 54 | 0 | 160 | 244 | 46 | 130 | 1.54e-11 | 63.5 |
Msa1346740 | AT1G60650.2 | 36.842 | 76 | 47 | 1 | 167 | 241 | 13 | 88 | 1.95e-11 | 65.5 |
Msa1346740 | AT1G60650.1 | 36.842 | 76 | 47 | 1 | 167 | 241 | 13 | 88 | 1.95e-11 | 65.5 |
Msa1346740 | AT5G53720.1 | 38.462 | 78 | 48 | 0 | 167 | 244 | 10 | 87 | 2.22e-11 | 60.8 |
Msa1346740 | AT4G24770.1 | 23.626 | 182 | 132 | 5 | 167 | 344 | 151 | 329 | 3.27e-11 | 65.1 |
Msa1346740 | AT4G24770.2 | 23.626 | 182 | 132 | 5 | 167 | 344 | 151 | 329 | 3.27e-11 | 65.1 |
Find 176 sgRNAs with CRISPR-Local
Find 380 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATCGAAGCTTTCGTTTCT+TGG | 0.186412 | tig0009218:-31151 | None:intergenic |
TCGGCTTGTTTGGTGGGTTC+AGG | 0.212017 | tig0009218:-31180 | None:intergenic |
TACTTCTTCTTGTTGGGGTT+CGG | 0.223272 | tig0009218:-31205 | None:intergenic |
GGGAATTTGCTTGGAGGTCT+TGG | 0.253466 | tig0009218:+32455 | Msa1346740:CDS |
TTCGGCTACTTCTTCTTGTT+GGG | 0.255517 | tig0009218:-31211 | None:intergenic |
CTTCGGCTACTTCTTCTTGT+TGG | 0.283404 | tig0009218:-31212 | None:intergenic |
ACTTCTTCTTGTTGGGGTTC+GGG | 0.291185 | tig0009218:-31204 | None:intergenic |
TCCCGGTGGCGCTCCTTACA+TGG | 0.295626 | tig0009218:+32619 | Msa1346740:CDS |
ATTTCTTCTTCTTGTGTTGT+TGG | 0.303042 | tig0009218:-31240 | None:intergenic |
GCTGTGACTGATAAGAATTC+TGG | 0.318324 | tig0009218:+31735 | Msa1346740:CDS |
TTCGGGTTCGGCTTGTTTGG+TGG | 0.320019 | tig0009218:-31187 | None:intergenic |
CTTGACCCAGCTGAGGATTC+TGG | 0.326079 | tig0009218:-32571 | None:intergenic |
TTCTTGTTGGGGTTCGGGTT+CGG | 0.334657 | tig0009218:-31199 | None:intergenic |
AAAATCTTTGTTCATGGTCT+TGG | 0.349785 | tig0009218:+31645 | Msa1346740:CDS |
TGCTGCTGCGTATGGTAATC+AGG | 0.354467 | tig0009218:+32508 | Msa1346740:CDS |
GAGGTGGATGATGGTCCATT+GGG | 0.357481 | tig0009218:+32005 | Msa1346740:CDS |
TGTCCCTCGAACACCTTATT+CGG | 0.360117 | tig0009218:-32113 | None:intergenic |
CAACGCCGGTGTGCCGGCTC+AGG | 0.360674 | tig0009218:+32364 | Msa1346740:CDS |
GCTATGGGATATGGCCAGCC+TGG | 0.363089 | tig0009218:+32533 | Msa1346740:CDS |
TGAGGTTGATCTTCTTCAAT+CGG | 0.376109 | tig0009218:-31267 | None:intergenic |
CACCGGAAAATCTTTGTTCA+TGG | 0.376446 | tig0009218:+31639 | Msa1346740:CDS |
GGCTTCGGCTGGACCTGTTC+CGG | 0.376743 | tig0009218:+31866 | Msa1346740:CDS |
CGGCTTGTTTGGTGGGTTCA+GGG | 0.376961 | tig0009218:-31179 | None:intergenic |
AATCAGGCTGCTATGGGATA+TGG | 0.385926 | tig0009218:+32524 | Msa1346740:CDS |
CTTTGTTCATGGTCTTGGTT+GGG | 0.386488 | tig0009218:+31650 | Msa1346740:CDS |
CAAGGAGCTGGATTGGGACT+TGG | 0.389500 | tig0009218:+32434 | Msa1346740:CDS |
GGGTTCGGGTTCGGCTTGTT+TGG | 0.394301 | tig0009218:-31190 | None:intergenic |
TTGGGACTTGGGAATTTGCT+TGG | 0.397145 | tig0009218:+32446 | Msa1346740:CDS |
TTGTGTTGTTGGTTCTTCTT+CGG | 0.397521 | tig0009218:-31229 | None:intergenic |
AAGCAGCCGCAGAAAGTGAT+TGG | 0.406418 | tig0009218:+31819 | Msa1346740:CDS |
ACAAGAGGAAGATCTTGAAT+TGG | 0.407627 | tig0009218:+31485 | Msa1346740:CDS |
CAGGGATTGAATCCGGCTCT+TGG | 0.407933 | tig0009218:+32383 | Msa1346740:CDS |
TTCGGTGGAGGAGCCGGAAC+AGG | 0.417847 | tig0009218:-31879 | None:intergenic |
TGCTAATCAAGGAGCTGGAT+TGG | 0.425869 | tig0009218:+32427 | Msa1346740:CDS |
GGACTTGGGAATTTGCTTGG+AGG | 0.433363 | tig0009218:+32449 | Msa1346740:CDS |
TCTGCTTTGCTTGCTAATCA+AGG | 0.433664 | tig0009218:+32416 | Msa1346740:CDS |
TATTGTCAGAAGGCTGTTGA+TGG | 0.441220 | tig0009218:+32143 | Msa1346740:CDS |
TCAGACACCGGTGGCGCATT+CGG | 0.442681 | tig0009218:-31897 | None:intergenic |
ATCACACGGTGGTCACTTGA+TGG | 0.443713 | tig0009218:+32313 | Msa1346740:CDS |
CGAACATTCTCAGACAGATC+TGG | 0.446657 | tig0009218:-31591 | None:intergenic |
TGGTATTGTGGCTGCAACCC+AGG | 0.451026 | tig0009218:-32551 | None:intergenic |
GGCGCATTCGGTGGAGGAGC+CGG | 0.453295 | tig0009218:-31885 | None:intergenic |
GAGGTTGATCTTCTTCAATC+GGG | 0.454540 | tig0009218:-31266 | None:intergenic |
TGGTTACAACGCCGGTGTGC+CGG | 0.455193 | tig0009218:+32358 | Msa1346740:CDS |
GCTAATCAAGGAGCTGGATT+GGG | 0.456434 | tig0009218:+32428 | Msa1346740:CDS |
CGGTGAAATTGAAGATTGTA+AGG | 0.458299 | tig0009218:+31713 | Msa1346740:CDS |
TCTTTGTTCATGGTCTTGGT+TGG | 0.459374 | tig0009218:+31649 | Msa1346740:CDS |
TGTAATTGCTCCTTCGTGAA+TGG | 0.461004 | tig0009218:-31537 | None:intergenic |
TAGGACTACATCGTGTCAAT+TGG | 0.462310 | tig0009218:+31845 | Msa1346740:CDS |
CGCAGAAAGTGATTGGGAAT+AGG | 0.466923 | tig0009218:+31826 | Msa1346740:CDS |
TGGTCCATTGGGGTTGGATA+AGG | 0.467413 | tig0009218:+32016 | Msa1346740:CDS |
GTATGGTAATCAGGCTGCTA+TGG | 0.467614 | tig0009218:+32517 | Msa1346740:CDS |
GGCGTTGGAAGAGCCGAATA+AGG | 0.467801 | tig0009218:+32100 | Msa1346740:CDS |
ATTGAATCCGGCTCTTGGAC+AGG | 0.468734 | tig0009218:+32388 | Msa1346740:CDS |
CCTCAGCTGGGTCAAGGTGG+TGG | 0.468825 | tig0009218:+32578 | Msa1346740:CDS |
AGCATCGGACTGGGTGTCGT+CGG | 0.471058 | tig0009218:+31790 | Msa1346740:CDS |
TCGGGTTCGGCTTGTTTGGT+GGG | 0.471504 | tig0009218:-31186 | None:intergenic |
GGAGGTTGCAGAAGATGAAG+AGG | 0.471827 | tig0009218:+31323 | Msa1346740:CDS |
ACCCATGTAAGGAGCGCCAC+CGG | 0.472419 | tig0009218:-32621 | None:intergenic |
TTGCTTGCTAATCAAGGAGC+TGG | 0.472566 | tig0009218:+32422 | Msa1346740:CDS |
GGTTCTAGAAGCTTCTCAAC+AGG | 0.476416 | tig0009218:-31516 | None:intergenic |
GCATCGGACTGGGTGTCGTC+GGG | 0.476975 | tig0009218:+31791 | Msa1346740:CDS |
TACATCGTGTCAATTGGCTT+CGG | 0.478390 | tig0009218:+31851 | Msa1346740:CDS |
GTCTGAGAATGTTCGTCAGC+TGG | 0.480431 | tig0009218:+31599 | Msa1346740:CDS |
GCCGGCTCAGGGATTGAATC+CGG | 0.480635 | tig0009218:+32376 | Msa1346740:CDS |
GAAGGCTGTTGATGGTCCTA+AGG | 0.480805 | tig0009218:+32151 | Msa1346740:CDS |
AGAGGTGGATGATGGTCCAT+TGG | 0.483246 | tig0009218:+32004 | Msa1346740:CDS |
CACCATCACGGTGGTGGTGG+TGG | 0.484347 | tig0009218:+32239 | Msa1346740:CDS |
AATTTGCTTGGAGGTCTTGG+TGG | 0.484936 | tig0009218:+32458 | Msa1346740:CDS |
CTGATGTGGACCCCGCTCAC+CGG | 0.485472 | tig0009218:+31622 | Msa1346740:CDS |
TCCTCCACCGAATGCGCCAC+CGG | 0.486406 | tig0009218:+31890 | Msa1346740:CDS |
AAGGAGCTGGATTGGGACTT+GGG | 0.487129 | tig0009218:+32435 | Msa1346740:CDS |
ATTGTGGCTGCAACCCAGGC+TGG | 0.487864 | tig0009218:-32547 | None:intergenic |
GGAGGACCAGCTTGATTCAC+CGG | 0.487882 | tig0009218:-32485 | None:intergenic |
GGTCACTTGATGGCTCCTAC+TGG | 0.489465 | tig0009218:+32323 | Msa1346740:CDS |
CGCTCCTTACATGGGTCACT+AGG | 0.492696 | tig0009218:+32628 | Msa1346740:CDS |
TCAAGTGACCACCGTGTGAT+GGG | 0.493869 | tig0009218:-32310 | None:intergenic |
ATGGCTCCTACTGGTCCTGC+TGG | 0.494184 | tig0009218:+32332 | Msa1346740:CDS |
TCGTGTCAATTGGCTTCGGC+TGG | 0.495359 | tig0009218:+31855 | Msa1346740:CDS |
GCGCCACCGGGACCAGGATG+AGG | 0.495486 | tig0009218:-32608 | None:intergenic |
ACCGGTGGCGCATTCGGTGG+AGG | 0.495710 | tig0009218:-31891 | None:intergenic |
AAGCTTTCGTTTCTTGGCCA+TGG | 0.498024 | tig0009218:-31145 | None:intergenic |
CTCACCTAGTGACCCATGTA+AGG | 0.500179 | tig0009218:-32632 | None:intergenic |
AAGTATTCACATGGTGGTGG+TGG | 0.503763 | tig0009218:+32287 | Msa1346740:CDS |
ACAATACCAGAATCCTCAGC+TGG | 0.504026 | tig0009218:+32565 | Msa1346740:CDS |
CTATGGGATATGGCCAGCCT+GGG | 0.505656 | tig0009218:+32534 | Msa1346740:CDS |
CCTACTGGTCCTGCTGGTGG+TGG | 0.506260 | tig0009218:+32338 | Msa1346740:CDS |
TGCGCTGTTTGTTTATAAGA+CGG | 0.506286 | tig0009218:+32061 | Msa1346740:CDS |
ATCAAGTGACCACCGTGTGA+TGG | 0.507458 | tig0009218:-32311 | None:intergenic |
GACGGTTGAGAGTGCTAAGA+AGG | 0.508593 | tig0009218:+32079 | Msa1346740:CDS |
GCCGGATTCAATCCCTGAGC+CGG | 0.510375 | tig0009218:-32377 | None:intergenic |
GACAAAGCCTGTCCAAGAGC+CGG | 0.512535 | tig0009218:-32395 | None:intergenic |
TAAGGAGCGCCACCGGGACC+AGG | 0.518273 | tig0009218:-32614 | None:intergenic |
TCGGCTACTTCTTCTTGTTG+GGG | 0.518576 | tig0009218:-31210 | None:intergenic |
GGATGATGGTCCATTGGGGT+TGG | 0.519268 | tig0009218:+32010 | Msa1346740:CDS |
TTGGGGTTGGATAAGGCGAC+TGG | 0.520918 | tig0009218:+32023 | Msa1346740:CDS |
AGCAGCCGCAGAAAGTGATT+GGG | 0.521007 | tig0009218:+31820 | Msa1346740:CDS |
TGATTACCATACGCAGCAGC+AGG | 0.524463 | tig0009218:-32506 | None:intergenic |
CCCGGTGGCGCTCCTTACAT+GGG | 0.525317 | tig0009218:+32620 | Msa1346740:CDS |
GTTAGACCTCATCCTGGTCC+CGG | 0.526551 | tig0009218:+32602 | Msa1346740:CDS |
AACGCCGGTGTGCCGGCTCA+GGG | 0.526695 | tig0009218:+32365 | Msa1346740:CDS |
CATCACCATCACGGTGGTGG+TGG | 0.527530 | tig0009218:+32236 | Msa1346740:CDS |
TTCAAACAACGCTGCCGTGT+CGG | 0.529293 | tig0009218:+31407 | Msa1346740:CDS |
TATGGTAATCAGGCTGCTAT+GGG | 0.529499 | tig0009218:+32518 | Msa1346740:CDS |
AGCTGAGGATTCTGGTATTG+TGG | 0.529596 | tig0009218:-32563 | None:intergenic |
GGTCCTCCTGCTGCTGCGTA+TGG | 0.531826 | tig0009218:+32500 | Msa1346740:CDS |
AGGTGAAGAAGAGCAAGAAG+AGG | 0.532986 | tig0009218:+31302 | Msa1346740:CDS |
TGGAGGTCTTGGTGGTGCGC+CGG | 0.533288 | tig0009218:+32466 | Msa1346740:CDS |
CTTTGAGTATACTCAGACAC+CGG | 0.535878 | tig0009218:-31909 | None:intergenic |
CAATAACAACGAAGAACAAG+AGG | 0.537174 | tig0009218:+31470 | Msa1346740:CDS |
TTTCAAGCAGTTTGGAGAGG+TGG | 0.539323 | tig0009218:+31989 | Msa1346740:CDS |
CCCATGTAAGGAGCGCCACC+GGG | 0.540286 | tig0009218:-32620 | None:intergenic |
CAGTTTGGAGAGGTGGATGA+TGG | 0.542414 | tig0009218:+31996 | Msa1346740:CDS |
TGTTCGTCAGCTGGCTGATG+TGG | 0.543983 | tig0009218:+31608 | Msa1346740:CDS |
TGAAGAAGAGCAAGAAGAGG+AGG | 0.546641 | tig0009218:+31305 | Msa1346740:CDS |
GACACCGGTGGCGCATTCGG+TGG | 0.554738 | tig0009218:-31894 | None:intergenic |
ACAAACAGCGCAAAACCCTT+CGG | 0.556538 | tig0009218:-32050 | None:intergenic |
CTATTCCCAATCACTTTCTG+CGG | 0.566327 | tig0009218:-31825 | None:intergenic |
TGAGAGTGCTAAGAAGGCGT+TGG | 0.568548 | tig0009218:+32085 | Msa1346740:CDS |
ACATACTTTGTATTGTCAGA+AGG | 0.571263 | tig0009218:+32133 | Msa1346740:CDS |
GCTCCTACTGGTCCTGCTGG+TGG | 0.571468 | tig0009218:+32335 | Msa1346740:CDS |
TGGTCCTAAGGGTTACAACA+AGG | 0.573830 | tig0009218:+32163 | Msa1346740:CDS |
CAGAATCCTCAGCTGGGTCA+AGG | 0.575625 | tig0009218:+32572 | Msa1346740:CDS |
GGTGGTGTTAGACCTCATCC+TGG | 0.576645 | tig0009218:+32596 | Msa1346740:CDS |
GGTGGTGGTGGCCCATCACA+CGG | 0.582405 | tig0009218:+32299 | Msa1346740:CDS |
GCGTTGTAACCACCACCAGC+AGG | 0.582900 | tig0009218:-32347 | None:intergenic |
CATCATCACCATCACGGTGG+TGG | 0.584236 | tig0009218:+32233 | Msa1346740:CDS |
AGAGCCGAATAAGGTGTTCG+AGG | 0.585996 | tig0009218:+32109 | Msa1346740:CDS |
AAGGCTGTTGATGGTCCTAA+GGG | 0.587938 | tig0009218:+32152 | Msa1346740:CDS |
GGTGCGCCGGTGAATCAAGC+TGG | 0.587980 | tig0009218:+32479 | Msa1346740:CDS |
AAGAATTCTGGAAAATCGAA+AGG | 0.589314 | tig0009218:+31747 | Msa1346740:CDS |
GTCGGATCAGACTGTGAAGG+TGG | 0.597030 | tig0009218:+31425 | Msa1346740:CDS |
GAGCCGAATAAGGTGTTCGA+GGG | 0.597871 | tig0009218:+32110 | Msa1346740:CDS |
GTCCTAAGGGTTACAACAAG+GGG | 0.599613 | tig0009218:+32165 | Msa1346740:CDS |
AGGTGGATGATGGTCCATTG+GGG | 0.599675 | tig0009218:+32006 | Msa1346740:CDS |
GGTCCTAAGGGTTACAACAA+GGG | 0.601882 | tig0009218:+32164 | Msa1346740:CDS |
AAGAAGTATTCACATGGTGG+TGG | 0.603956 | tig0009218:+32284 | Msa1346740:CDS |
CAATCCCTGAGCCGGCACAC+CGG | 0.607582 | tig0009218:-32369 | None:intergenic |
AGGTTGATCTTCTTCAATCG+GGG | 0.608027 | tig0009218:-31265 | None:intergenic |
TAAGGCGACTGGGAAGCCGA+AGG | 0.612001 | tig0009218:+32034 | Msa1346740:CDS |
TGGGGTTGGATAAGGCGACT+GGG | 0.613826 | tig0009218:+32024 | Msa1346740:CDS |
GTCGCCTTATCCAACCCCAA+TGG | 0.615111 | tig0009218:-32020 | None:intergenic |
CTAGAAAATCAACAACAAGA+AGG | 0.619400 | tig0009218:+31372 | Msa1346740:CDS |
ACACGTGCTTGTGAAGCAAG+CGG | 0.622021 | tig0009218:+31557 | Msa1346740:CDS |
CAACCTCAAAACGAAGGAGA+AGG | 0.623160 | tig0009218:+31282 | Msa1346740:CDS |
AAGGTGGAAGCTAACGGTGG+TGG | 0.624235 | tig0009218:+31441 | Msa1346740:CDS |
CCACCACCAGCAGGACCAGT+AGG | 0.625255 | tig0009218:-32338 | None:intergenic |
GTGGTGGTCACTACAATCCA+AGG | 0.627985 | tig0009218:+32255 | Msa1346740:CDS |
GCTGGTGGTGGTTACAACGC+CGG | 0.630397 | tig0009218:+32350 | Msa1346740:CDS |
AAGGCGACTGGGAAGCCGAA+GGG | 0.636030 | tig0009218:+32035 | Msa1346740:CDS |
AATCAACAACAAGAAGGTGG+CGG | 0.642566 | tig0009218:+31378 | Msa1346740:CDS |
GAAGATCAACCTCAAAACGA+AGG | 0.642987 | tig0009218:+31276 | Msa1346740:CDS |
TTCACCGTACTTCGAAAACG+TGG | 0.643668 | tig0009218:-31697 | None:intergenic |
GAAAATCAACAACAAGAAGG+TGG | 0.646149 | tig0009218:+31375 | Msa1346740:CDS |
CAATACCAGAATCCTCAGCT+GGG | 0.650944 | tig0009218:+32566 | Msa1346740:CDS |
CGGTGTCTGAGTATACTCAA+AGG | 0.652912 | tig0009218:+31910 | Msa1346740:CDS |
AGACCTCATCCTGGTCCCGG+TGG | 0.660243 | tig0009218:+32605 | Msa1346740:CDS |
CCACCACCTTGACCCAGCTG+AGG | 0.661990 | tig0009218:-32578 | None:intergenic |
CATTCGCATCATCACCATCA+CGG | 0.665008 | tig0009218:+32227 | Msa1346740:CDS |
GAAAAGAAGTATTCACATGG+TGG | 0.667361 | tig0009218:+32281 | Msa1346740:CDS |
ACCGTACTTCGAAAACGTGG+TGG | 0.667699 | tig0009218:-31694 | None:intergenic |
CGTGTCGGATCAGACTGTGA+AGG | 0.668144 | tig0009218:+31422 | Msa1346740:CDS |
ACTGTGAAGGTGGAAGCTAA+CGG | 0.668213 | tig0009218:+31435 | Msa1346740:CDS |
AATCCTCAGCTGGGTCAAGG+TGG | 0.672405 | tig0009218:+32575 | Msa1346740:CDS |
TTACCATACGCAGCAGCAGG+AGG | 0.677100 | tig0009218:-32503 | None:intergenic |
CTTCACAGTCTGATCCGACA+CGG | 0.679646 | tig0009218:-31421 | None:intergenic |
TGGTGATGATGCGAATGATG+CGG | 0.691685 | tig0009218:-32221 | None:intergenic |
GATGAAGAGGATGATCAACA+AGG | 0.691927 | tig0009218:+31336 | Msa1346740:CDS |
TGAGTATACTCAGACACCGG+TGG | 0.708396 | tig0009218:-31906 | None:intergenic |
AAAGAAAAGAAGTATTCACA+TGG | 0.713599 | tig0009218:+32278 | Msa1346740:CDS |
GCTTCTAGAACCATTCACGA+AGG | 0.714086 | tig0009218:+31527 | Msa1346740:CDS |
TCCTAAGGGTTACAACAAGG+GGG | 0.727464 | tig0009218:+32166 | Msa1346740:CDS |
CCTAAGGGTTACAACAAGGG+GGG | 0.736362 | tig0009218:+32167 | Msa1346740:CDS |
GGTGGTGGCCCATCACACGG+TGG | 0.744986 | tig0009218:+32302 | Msa1346740:CDS |
TCGCATCATCACCATCACGG+TGG | 0.781979 | tig0009218:+32230 | Msa1346740:CDS |
GTGAAGGTGGAAGCTAACGG+TGG | 0.792915 | tig0009218:+31438 | Msa1346740:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | CTTTTATTTTGTTTAAGCAT+CGG | + | tig0009218:31775-31794 | Msa1346740:CDS | 20.0% |
!!! | CTTTTATTTTGTTTAAGCAT+CGG | + | tig0009218:31775-31794 | Msa1346740:CDS | 20.0% |
!!! | TTCTTGTTGTTGATTTTCTA+GGG | - | tig0009218:31373-31392 | None:intergenic | 25.0% |
!!! | AAAGAAAAGAAGTATTCACA+TGG | + | tig0009218:32278-32297 | Msa1346740:CDS | 25.0% |
!!! | TTCTTGTTGTTGATTTTCTA+GGG | - | tig0009218:31373-31392 | None:intergenic | 25.0% |
!!! | AAAGAAAAGAAGTATTCACA+TGG | + | tig0009218:32278-32297 | Msa1346740:CDS | 25.0% |
ATTTCTTCTTCTTGTGTTGT+TGG | - | tig0009218:31243-31262 | None:intergenic | 30.0% | |
!!! | CTTCTTGTTGTTGATTTTCT+AGG | - | tig0009218:31374-31393 | None:intergenic | 30.0% |
CTAGAAAATCAACAACAAGA+AGG | + | tig0009218:31372-31391 | Msa1346740:CDS | 30.0% | |
AAAATCTTTGTTCATGGTCT+TGG | + | tig0009218:31645-31664 | Msa1346740:CDS | 30.0% | |
! | AAGAATTCTGGAAAATCGAA+AGG | + | tig0009218:31747-31766 | Msa1346740:CDS | 30.0% |
ACATACTTTGTATTGTCAGA+AGG | + | tig0009218:32133-32152 | Msa1346740:CDS | 30.0% | |
! | GAATACTTCTTTTCTTTCCT+TGG | - | tig0009218:32275-32294 | None:intergenic | 30.0% |
ATTTCTTCTTCTTGTGTTGT+TGG | - | tig0009218:31243-31262 | None:intergenic | 30.0% | |
!!! | CTTCTTGTTGTTGATTTTCT+AGG | - | tig0009218:31374-31393 | None:intergenic | 30.0% |
CTAGAAAATCAACAACAAGA+AGG | + | tig0009218:31372-31391 | Msa1346740:CDS | 30.0% | |
AAAATCTTTGTTCATGGTCT+TGG | + | tig0009218:31645-31664 | Msa1346740:CDS | 30.0% | |
! | AAGAATTCTGGAAAATCGAA+AGG | + | tig0009218:31747-31766 | Msa1346740:CDS | 30.0% |
ACATACTTTGTATTGTCAGA+AGG | + | tig0009218:32133-32152 | Msa1346740:CDS | 30.0% | |
! | GAATACTTCTTTTCTTTCCT+TGG | - | tig0009218:32275-32294 | None:intergenic | 30.0% |
!! | TTGTGTTGTTGGTTCTTCTT+CGG | - | tig0009218:31232-31251 | None:intergenic | 35.0% |
! | TGAGGTTGATCTTCTTCAAT+CGG | - | tig0009218:31270-31289 | None:intergenic | 35.0% |
GAAAATCAACAACAAGAAGG+TGG | + | tig0009218:31375-31394 | Msa1346740:CDS | 35.0% | |
CAATAACAACGAAGAACAAG+AGG | + | tig0009218:31470-31489 | Msa1346740:CDS | 35.0% | |
ACAAGAGGAAGATCTTGAAT+TGG | + | tig0009218:31485-31504 | Msa1346740:CDS | 35.0% | |
! | GACCATGAACAAAGATTTTC+CGG | - | tig0009218:31644-31663 | None:intergenic | 35.0% |
CGGTGAAATTGAAGATTGTA+AGG | + | tig0009218:31713-31732 | Msa1346740:CDS | 35.0% | |
!!! | ATTTTGTTTAAGCATCGGAC+TGG | + | tig0009218:31780-31799 | Msa1346740:CDS | 35.0% |
!!! | TTTTGTTTAAGCATCGGACT+GGG | + | tig0009218:31781-31800 | Msa1346740:CDS | 35.0% |
!!! | CTTGAGTTTTTCAAGCAGTT+TGG | + | tig0009218:31981-32000 | Msa1346740:CDS | 35.0% |
TGCGCTGTTTGTTTATAAGA+CGG | + | tig0009218:32061-32080 | Msa1346740:CDS | 35.0% | |
!! | GAAAAGAAGTATTCACATGG+TGG | + | tig0009218:32281-32300 | Msa1346740:CDS | 35.0% |
!! | TTGTGTTGTTGGTTCTTCTT+CGG | - | tig0009218:31232-31251 | None:intergenic | 35.0% |
! | TGAGGTTGATCTTCTTCAAT+CGG | - | tig0009218:31270-31289 | None:intergenic | 35.0% |
GAAAATCAACAACAAGAAGG+TGG | + | tig0009218:31375-31394 | Msa1346740:CDS | 35.0% | |
CAATAACAACGAAGAACAAG+AGG | + | tig0009218:31470-31489 | Msa1346740:CDS | 35.0% | |
ACAAGAGGAAGATCTTGAAT+TGG | + | tig0009218:31485-31504 | Msa1346740:CDS | 35.0% | |
! | GACCATGAACAAAGATTTTC+CGG | - | tig0009218:31644-31663 | None:intergenic | 35.0% |
CGGTGAAATTGAAGATTGTA+AGG | + | tig0009218:31713-31732 | Msa1346740:CDS | 35.0% | |
!!! | ATTTTGTTTAAGCATCGGAC+TGG | + | tig0009218:31780-31799 | Msa1346740:CDS | 35.0% |
!!! | TTTTGTTTAAGCATCGGACT+GGG | + | tig0009218:31781-31800 | Msa1346740:CDS | 35.0% |
!!! | CTTGAGTTTTTCAAGCAGTT+TGG | + | tig0009218:31981-32000 | Msa1346740:CDS | 35.0% |
TGCGCTGTTTGTTTATAAGA+CGG | + | tig0009218:32061-32080 | Msa1346740:CDS | 35.0% | |
!! | GAAAAGAAGTATTCACATGG+TGG | + | tig0009218:32281-32300 | Msa1346740:CDS | 35.0% |
AGATCGAAGCTTTCGTTTCT+TGG | - | tig0009218:31154-31173 | None:intergenic | 40.0% | |
TACTTCTTCTTGTTGGGGTT+CGG | - | tig0009218:31208-31227 | None:intergenic | 40.0% | |
TTCGGCTACTTCTTCTTGTT+GGG | - | tig0009218:31214-31233 | None:intergenic | 40.0% | |
! | AGGTTGATCTTCTTCAATCG+GGG | - | tig0009218:31268-31287 | None:intergenic | 40.0% |
! | GAGGTTGATCTTCTTCAATC+GGG | - | tig0009218:31269-31288 | None:intergenic | 40.0% |
GAAGATCAACCTCAAAACGA+AGG | + | tig0009218:31276-31295 | Msa1346740:CDS | 40.0% | |
GATGAAGAGGATGATCAACA+AGG | + | tig0009218:31336-31355 | Msa1346740:CDS | 40.0% | |
AATCAACAACAAGAAGGTGG+CGG | + | tig0009218:31378-31397 | Msa1346740:CDS | 40.0% | |
TGTAATTGCTCCTTCGTGAA+TGG | - | tig0009218:31540-31559 | None:intergenic | 40.0% | |
! | AACAAAGATTTTCCGGTGAG+CGG | - | tig0009218:31637-31656 | None:intergenic | 40.0% |
CACCGGAAAATCTTTGTTCA+TGG | + | tig0009218:31639-31658 | Msa1346740:CDS | 40.0% | |
! | TCTTTGTTCATGGTCTTGGT+TGG | + | tig0009218:31649-31668 | Msa1346740:CDS | 40.0% |
! | CTTTGTTCATGGTCTTGGTT+GGG | + | tig0009218:31650-31669 | Msa1346740:CDS | 40.0% |
GCTGTGACTGATAAGAATTC+TGG | + | tig0009218:31735-31754 | Msa1346740:CDS | 40.0% | |
CTATTCCCAATCACTTTCTG+CGG | - | tig0009218:31828-31847 | None:intergenic | 40.0% | |
TAGGACTACATCGTGTCAAT+TGG | + | tig0009218:31845-31864 | Msa1346740:CDS | 40.0% | |
! | TACATCGTGTCAATTGGCTT+CGG | + | tig0009218:31851-31870 | Msa1346740:CDS | 40.0% |
CTTTGAGTATACTCAGACAC+CGG | - | tig0009218:31912-31931 | None:intergenic | 40.0% | |
AAAAACTCAAGCAGCTTCTG+AGG | - | tig0009218:31972-31991 | None:intergenic | 40.0% | |
!!! | GTTTTTCAAGCAGTTTGGAG+AGG | + | tig0009218:31986-32005 | Msa1346740:CDS | 40.0% |
TATTGTCAGAAGGCTGTTGA+TGG | + | tig0009218:32143-32162 | Msa1346740:CDS | 40.0% | |
!! | AAGAAGTATTCACATGGTGG+TGG | + | tig0009218:32284-32303 | Msa1346740:CDS | 40.0% |
! | TCTGCTTTGCTTGCTAATCA+AGG | + | tig0009218:32416-32435 | Msa1346740:CDS | 40.0% |
TATGGTAATCAGGCTGCTAT+GGG | + | tig0009218:32518-32537 | Msa1346740:CDS | 40.0% | |
AGATCGAAGCTTTCGTTTCT+TGG | - | tig0009218:31154-31173 | None:intergenic | 40.0% | |
TACTTCTTCTTGTTGGGGTT+CGG | - | tig0009218:31208-31227 | None:intergenic | 40.0% | |
TTCGGCTACTTCTTCTTGTT+GGG | - | tig0009218:31214-31233 | None:intergenic | 40.0% | |
! | AGGTTGATCTTCTTCAATCG+GGG | - | tig0009218:31268-31287 | None:intergenic | 40.0% |
! | GAGGTTGATCTTCTTCAATC+GGG | - | tig0009218:31269-31288 | None:intergenic | 40.0% |
GAAGATCAACCTCAAAACGA+AGG | + | tig0009218:31276-31295 | Msa1346740:CDS | 40.0% | |
GATGAAGAGGATGATCAACA+AGG | + | tig0009218:31336-31355 | Msa1346740:CDS | 40.0% | |
AATCAACAACAAGAAGGTGG+CGG | + | tig0009218:31378-31397 | Msa1346740:CDS | 40.0% | |
TGTAATTGCTCCTTCGTGAA+TGG | - | tig0009218:31540-31559 | None:intergenic | 40.0% | |
! | AACAAAGATTTTCCGGTGAG+CGG | - | tig0009218:31637-31656 | None:intergenic | 40.0% |
CACCGGAAAATCTTTGTTCA+TGG | + | tig0009218:31639-31658 | Msa1346740:CDS | 40.0% | |
! | TCTTTGTTCATGGTCTTGGT+TGG | + | tig0009218:31649-31668 | Msa1346740:CDS | 40.0% |
! | CTTTGTTCATGGTCTTGGTT+GGG | + | tig0009218:31650-31669 | Msa1346740:CDS | 40.0% |
GCTGTGACTGATAAGAATTC+TGG | + | tig0009218:31735-31754 | Msa1346740:CDS | 40.0% | |
CTATTCCCAATCACTTTCTG+CGG | - | tig0009218:31828-31847 | None:intergenic | 40.0% | |
TAGGACTACATCGTGTCAAT+TGG | + | tig0009218:31845-31864 | Msa1346740:CDS | 40.0% | |
! | TACATCGTGTCAATTGGCTT+CGG | + | tig0009218:31851-31870 | Msa1346740:CDS | 40.0% |
CTTTGAGTATACTCAGACAC+CGG | - | tig0009218:31912-31931 | None:intergenic | 40.0% | |
AAAAACTCAAGCAGCTTCTG+AGG | - | tig0009218:31972-31991 | None:intergenic | 40.0% | |
!!! | GTTTTTCAAGCAGTTTGGAG+AGG | + | tig0009218:31986-32005 | Msa1346740:CDS | 40.0% |
TATTGTCAGAAGGCTGTTGA+TGG | + | tig0009218:32143-32162 | Msa1346740:CDS | 40.0% | |
!! | AAGAAGTATTCACATGGTGG+TGG | + | tig0009218:32284-32303 | Msa1346740:CDS | 40.0% |
! | TCTGCTTTGCTTGCTAATCA+AGG | + | tig0009218:32416-32435 | Msa1346740:CDS | 40.0% |
TATGGTAATCAGGCTGCTAT+GGG | + | tig0009218:32518-32537 | Msa1346740:CDS | 40.0% | |
ACTTCTTCTTGTTGGGGTTC+GGG | - | tig0009218:31207-31226 | None:intergenic | 45.0% | |
TCGGCTACTTCTTCTTGTTG+GGG | - | tig0009218:31213-31232 | None:intergenic | 45.0% | |
CTTCGGCTACTTCTTCTTGT+TGG | - | tig0009218:31215-31234 | None:intergenic | 45.0% | |
CAACCTCAAAACGAAGGAGA+AGG | + | tig0009218:31282-31301 | Msa1346740:CDS | 45.0% | |
! | TCACCTTCTCCTTCGTTTTG+AGG | - | tig0009218:31288-31307 | None:intergenic | 45.0% |
AGGTGAAGAAGAGCAAGAAG+AGG | + | tig0009218:31302-31321 | Msa1346740:CDS | 45.0% | |
TGAAGAAGAGCAAGAAGAGG+AGG | + | tig0009218:31305-31324 | Msa1346740:CDS | 45.0% | |
ACTGTGAAGGTGGAAGCTAA+CGG | + | tig0009218:31435-31454 | Msa1346740:CDS | 45.0% | |
!! | GGTTCTAGAAGCTTCTCAAC+AGG | - | tig0009218:31519-31538 | None:intergenic | 45.0% |
!! | GCTTCTAGAACCATTCACGA+AGG | + | tig0009218:31527-31546 | Msa1346740:CDS | 45.0% |
CGAACATTCTCAGACAGATC+TGG | - | tig0009218:31594-31613 | None:intergenic | 45.0% | |
! | ACAAAGATTTTCCGGTGAGC+GGG | - | tig0009218:31636-31655 | None:intergenic | 45.0% |
! | ACCACCACGTTTTCGAAGTA+CGG | + | tig0009218:31693-31712 | Msa1346740:CDS | 45.0% |
TTCACCGTACTTCGAAAACG+TGG | - | tig0009218:31700-31719 | None:intergenic | 45.0% | |
CGCAGAAAGTGATTGGGAAT+AGG | + | tig0009218:31826-31845 | Msa1346740:CDS | 45.0% | |
CGGTGTCTGAGTATACTCAA+AGG | + | tig0009218:31910-31929 | Msa1346740:CDS | 45.0% | |
TTTCAAGCAGTTTGGAGAGG+TGG | + | tig0009218:31989-32008 | Msa1346740:CDS | 45.0% | |
ACAAACAGCGCAAAACCCTT+CGG | - | tig0009218:32053-32072 | None:intergenic | 45.0% | |
TGTCCCTCGAACACCTTATT+CGG | - | tig0009218:32116-32135 | None:intergenic | 45.0% | |
!! | AAGGCTGTTGATGGTCCTAA+GGG | + | tig0009218:32152-32171 | Msa1346740:CDS | 45.0% |
TGGTCCTAAGGGTTACAACA+AGG | + | tig0009218:32163-32182 | Msa1346740:CDS | 45.0% | |
GGTCCTAAGGGTTACAACAA+GGG | + | tig0009218:32164-32183 | Msa1346740:CDS | 45.0% | |
GTCCTAAGGGTTACAACAAG+GGG | + | tig0009218:32165-32184 | Msa1346740:CDS | 45.0% | |
TCCTAAGGGTTACAACAAGG+GGG | + | tig0009218:32166-32185 | Msa1346740:CDS | 45.0% | |
! | TGGTGATGATGCGAATGATG+CGG | - | tig0009218:32224-32243 | None:intergenic | 45.0% |
CATTCGCATCATCACCATCA+CGG | + | tig0009218:32227-32246 | Msa1346740:CDS | 45.0% | |
!! | AAGTATTCACATGGTGGTGG+TGG | + | tig0009218:32287-32306 | Msa1346740:CDS | 45.0% |
! | TTGCTTGCTAATCAAGGAGC+TGG | + | tig0009218:32422-32441 | Msa1346740:CDS | 45.0% |
TGCTAATCAAGGAGCTGGAT+TGG | + | tig0009218:32427-32446 | Msa1346740:CDS | 45.0% | |
GCTAATCAAGGAGCTGGATT+GGG | + | tig0009218:32428-32447 | Msa1346740:CDS | 45.0% | |
! | TTGGGACTTGGGAATTTGCT+TGG | + | tig0009218:32446-32465 | Msa1346740:CDS | 45.0% |
! | AATTTGCTTGGAGGTCTTGG+TGG | + | tig0009218:32458-32477 | Msa1346740:CDS | 45.0% |
GTATGGTAATCAGGCTGCTA+TGG | + | tig0009218:32517-32536 | Msa1346740:CDS | 45.0% | |
AATCAGGCTGCTATGGGATA+TGG | + | tig0009218:32524-32543 | Msa1346740:CDS | 45.0% | |
AGCTGAGGATTCTGGTATTG+TGG | - | tig0009218:32566-32585 | None:intergenic | 45.0% | |
ACAATACCAGAATCCTCAGC+TGG | + | tig0009218:32565-32584 | Msa1346740:CDS | 45.0% | |
CAATACCAGAATCCTCAGCT+GGG | + | tig0009218:32566-32585 | Msa1346740:CDS | 45.0% | |
ACTTCTTCTTGTTGGGGTTC+GGG | - | tig0009218:31207-31226 | None:intergenic | 45.0% | |
TCGGCTACTTCTTCTTGTTG+GGG | - | tig0009218:31213-31232 | None:intergenic | 45.0% | |
CTTCGGCTACTTCTTCTTGT+TGG | - | tig0009218:31215-31234 | None:intergenic | 45.0% | |
CAACCTCAAAACGAAGGAGA+AGG | + | tig0009218:31282-31301 | Msa1346740:CDS | 45.0% | |
! | TCACCTTCTCCTTCGTTTTG+AGG | - | tig0009218:31288-31307 | None:intergenic | 45.0% |
AGGTGAAGAAGAGCAAGAAG+AGG | + | tig0009218:31302-31321 | Msa1346740:CDS | 45.0% | |
TGAAGAAGAGCAAGAAGAGG+AGG | + | tig0009218:31305-31324 | Msa1346740:CDS | 45.0% | |
ACTGTGAAGGTGGAAGCTAA+CGG | + | tig0009218:31435-31454 | Msa1346740:CDS | 45.0% | |
!! | GGTTCTAGAAGCTTCTCAAC+AGG | - | tig0009218:31519-31538 | None:intergenic | 45.0% |
!! | GCTTCTAGAACCATTCACGA+AGG | + | tig0009218:31527-31546 | Msa1346740:CDS | 45.0% |
CGAACATTCTCAGACAGATC+TGG | - | tig0009218:31594-31613 | None:intergenic | 45.0% | |
! | ACAAAGATTTTCCGGTGAGC+GGG | - | tig0009218:31636-31655 | None:intergenic | 45.0% |
! | ACCACCACGTTTTCGAAGTA+CGG | + | tig0009218:31693-31712 | Msa1346740:CDS | 45.0% |
TTCACCGTACTTCGAAAACG+TGG | - | tig0009218:31700-31719 | None:intergenic | 45.0% | |
CGCAGAAAGTGATTGGGAAT+AGG | + | tig0009218:31826-31845 | Msa1346740:CDS | 45.0% | |
CGGTGTCTGAGTATACTCAA+AGG | + | tig0009218:31910-31929 | Msa1346740:CDS | 45.0% | |
TTTCAAGCAGTTTGGAGAGG+TGG | + | tig0009218:31989-32008 | Msa1346740:CDS | 45.0% | |
ACAAACAGCGCAAAACCCTT+CGG | - | tig0009218:32053-32072 | None:intergenic | 45.0% | |
TGTCCCTCGAACACCTTATT+CGG | - | tig0009218:32116-32135 | None:intergenic | 45.0% | |
!! | AAGGCTGTTGATGGTCCTAA+GGG | + | tig0009218:32152-32171 | Msa1346740:CDS | 45.0% |
TGGTCCTAAGGGTTACAACA+AGG | + | tig0009218:32163-32182 | Msa1346740:CDS | 45.0% | |
GGTCCTAAGGGTTACAACAA+GGG | + | tig0009218:32164-32183 | Msa1346740:CDS | 45.0% | |
GTCCTAAGGGTTACAACAAG+GGG | + | tig0009218:32165-32184 | Msa1346740:CDS | 45.0% | |
TCCTAAGGGTTACAACAAGG+GGG | + | tig0009218:32166-32185 | Msa1346740:CDS | 45.0% | |
! | TGGTGATGATGCGAATGATG+CGG | - | tig0009218:32224-32243 | None:intergenic | 45.0% |
CATTCGCATCATCACCATCA+CGG | + | tig0009218:32227-32246 | Msa1346740:CDS | 45.0% | |
!! | AAGTATTCACATGGTGGTGG+TGG | + | tig0009218:32287-32306 | Msa1346740:CDS | 45.0% |
! | TTGCTTGCTAATCAAGGAGC+TGG | + | tig0009218:32422-32441 | Msa1346740:CDS | 45.0% |
TGCTAATCAAGGAGCTGGAT+TGG | + | tig0009218:32427-32446 | Msa1346740:CDS | 45.0% | |
GCTAATCAAGGAGCTGGATT+GGG | + | tig0009218:32428-32447 | Msa1346740:CDS | 45.0% | |
! | TTGGGACTTGGGAATTTGCT+TGG | + | tig0009218:32446-32465 | Msa1346740:CDS | 45.0% |
! | AATTTGCTTGGAGGTCTTGG+TGG | + | tig0009218:32458-32477 | Msa1346740:CDS | 45.0% |
GTATGGTAATCAGGCTGCTA+TGG | + | tig0009218:32517-32536 | Msa1346740:CDS | 45.0% | |
AATCAGGCTGCTATGGGATA+TGG | + | tig0009218:32524-32543 | Msa1346740:CDS | 45.0% | |
AGCTGAGGATTCTGGTATTG+TGG | - | tig0009218:32566-32585 | None:intergenic | 45.0% | |
ACAATACCAGAATCCTCAGC+TGG | + | tig0009218:32565-32584 | Msa1346740:CDS | 45.0% | |
CAATACCAGAATCCTCAGCT+GGG | + | tig0009218:32566-32585 | Msa1346740:CDS | 45.0% | |
! | TTCTTGTTGGGGTTCGGGTT+CGG | - | tig0009218:31202-31221 | None:intergenic | 50.0% |
GGAGGTTGCAGAAGATGAAG+AGG | + | tig0009218:31323-31342 | Msa1346740:CDS | 50.0% | |
TTCAAACAACGCTGCCGTGT+CGG | + | tig0009218:31407-31426 | Msa1346740:CDS | 50.0% | |
CTTCACAGTCTGATCCGACA+CGG | - | tig0009218:31424-31443 | None:intergenic | 50.0% | |
ACACGTGCTTGTGAAGCAAG+CGG | + | tig0009218:31557-31576 | Msa1346740:CDS | 50.0% | |
GTCTGAGAATGTTCGTCAGC+TGG | + | tig0009218:31599-31618 | Msa1346740:CDS | 50.0% | |
! | CAAAGATTTTCCGGTGAGCG+GGG | - | tig0009218:31635-31654 | None:intergenic | 50.0% |
ACCGTACTTCGAAAACGTGG+TGG | - | tig0009218:31697-31716 | None:intergenic | 50.0% | |
AAGCAGCCGCAGAAAGTGAT+TGG | + | tig0009218:31819-31838 | Msa1346740:CDS | 50.0% | |
AGCAGCCGCAGAAAGTGATT+GGG | + | tig0009218:31820-31839 | Msa1346740:CDS | 50.0% | |
TGAGTATACTCAGACACCGG+TGG | - | tig0009218:31909-31928 | None:intergenic | 50.0% | |
CAGTTTGGAGAGGTGGATGA+TGG | + | tig0009218:31996-32015 | Msa1346740:CDS | 50.0% | |
! | AGAGGTGGATGATGGTCCAT+TGG | + | tig0009218:32004-32023 | Msa1346740:CDS | 50.0% |
! | GAGGTGGATGATGGTCCATT+GGG | + | tig0009218:32005-32024 | Msa1346740:CDS | 50.0% |
! | AGGTGGATGATGGTCCATTG+GGG | + | tig0009218:32006-32025 | Msa1346740:CDS | 50.0% |
TGGTCCATTGGGGTTGGATA+AGG | + | tig0009218:32016-32035 | Msa1346740:CDS | 50.0% | |
!! | GACGGTTGAGAGTGCTAAGA+AGG | + | tig0009218:32079-32098 | Msa1346740:CDS | 50.0% |
!! | TGAGAGTGCTAAGAAGGCGT+TGG | + | tig0009218:32085-32104 | Msa1346740:CDS | 50.0% |
! | AGAGCCGAATAAGGTGTTCG+AGG | + | tig0009218:32109-32128 | Msa1346740:CDS | 50.0% |
! | GAGCCGAATAAGGTGTTCGA+GGG | + | tig0009218:32110-32129 | Msa1346740:CDS | 50.0% |
!! | GAAGGCTGTTGATGGTCCTA+AGG | + | tig0009218:32151-32170 | Msa1346740:CDS | 50.0% |
CCTAAGGGTTACAACAAGGG+GGG | + | tig0009218:32167-32186 | Msa1346740:CDS | 50.0% | |
GTGGTGGTCACTACAATCCA+AGG | + | tig0009218:32255-32274 | Msa1346740:CDS | 50.0% | |
TCAAGTGACCACCGTGTGAT+GGG | - | tig0009218:32313-32332 | None:intergenic | 50.0% | |
ATCAAGTGACCACCGTGTGA+TGG | - | tig0009218:32314-32333 | None:intergenic | 50.0% | |
ATCACACGGTGGTCACTTGA+TGG | + | tig0009218:32313-32332 | Msa1346740:CDS | 50.0% | |
ATTGAATCCGGCTCTTGGAC+AGG | + | tig0009218:32388-32407 | Msa1346740:CDS | 50.0% | |
! | AAGGAGCTGGATTGGGACTT+GGG | + | tig0009218:32435-32454 | Msa1346740:CDS | 50.0% |
! | GGACTTGGGAATTTGCTTGG+AGG | + | tig0009218:32449-32468 | Msa1346740:CDS | 50.0% |
! | GGGAATTTGCTTGGAGGTCT+TGG | + | tig0009218:32455-32474 | Msa1346740:CDS | 50.0% |
TGATTACCATACGCAGCAGC+AGG | - | tig0009218:32509-32528 | None:intergenic | 50.0% | |
TGCTGCTGCGTATGGTAATC+AGG | + | tig0009218:32508-32527 | Msa1346740:CDS | 50.0% | |
! | TTCTTGTTGGGGTTCGGGTT+CGG | - | tig0009218:31202-31221 | None:intergenic | 50.0% |
GGAGGTTGCAGAAGATGAAG+AGG | + | tig0009218:31323-31342 | Msa1346740:CDS | 50.0% | |
TTCAAACAACGCTGCCGTGT+CGG | + | tig0009218:31407-31426 | Msa1346740:CDS | 50.0% | |
CTTCACAGTCTGATCCGACA+CGG | - | tig0009218:31424-31443 | None:intergenic | 50.0% | |
ACACGTGCTTGTGAAGCAAG+CGG | + | tig0009218:31557-31576 | Msa1346740:CDS | 50.0% | |
GTCTGAGAATGTTCGTCAGC+TGG | + | tig0009218:31599-31618 | Msa1346740:CDS | 50.0% | |
! | CAAAGATTTTCCGGTGAGCG+GGG | - | tig0009218:31635-31654 | None:intergenic | 50.0% |
ACCGTACTTCGAAAACGTGG+TGG | - | tig0009218:31697-31716 | None:intergenic | 50.0% | |
AAGCAGCCGCAGAAAGTGAT+TGG | + | tig0009218:31819-31838 | Msa1346740:CDS | 50.0% | |
AGCAGCCGCAGAAAGTGATT+GGG | + | tig0009218:31820-31839 | Msa1346740:CDS | 50.0% | |
TGAGTATACTCAGACACCGG+TGG | - | tig0009218:31909-31928 | None:intergenic | 50.0% | |
CAGTTTGGAGAGGTGGATGA+TGG | + | tig0009218:31996-32015 | Msa1346740:CDS | 50.0% | |
! | AGAGGTGGATGATGGTCCAT+TGG | + | tig0009218:32004-32023 | Msa1346740:CDS | 50.0% |
! | GAGGTGGATGATGGTCCATT+GGG | + | tig0009218:32005-32024 | Msa1346740:CDS | 50.0% |
! | AGGTGGATGATGGTCCATTG+GGG | + | tig0009218:32006-32025 | Msa1346740:CDS | 50.0% |
TGGTCCATTGGGGTTGGATA+AGG | + | tig0009218:32016-32035 | Msa1346740:CDS | 50.0% | |
!! | GACGGTTGAGAGTGCTAAGA+AGG | + | tig0009218:32079-32098 | Msa1346740:CDS | 50.0% |
!! | TGAGAGTGCTAAGAAGGCGT+TGG | + | tig0009218:32085-32104 | Msa1346740:CDS | 50.0% |
! | AGAGCCGAATAAGGTGTTCG+AGG | + | tig0009218:32109-32128 | Msa1346740:CDS | 50.0% |
! | GAGCCGAATAAGGTGTTCGA+GGG | + | tig0009218:32110-32129 | Msa1346740:CDS | 50.0% |
!! | GAAGGCTGTTGATGGTCCTA+AGG | + | tig0009218:32151-32170 | Msa1346740:CDS | 50.0% |
CCTAAGGGTTACAACAAGGG+GGG | + | tig0009218:32167-32186 | Msa1346740:CDS | 50.0% | |
GTGGTGGTCACTACAATCCA+AGG | + | tig0009218:32255-32274 | Msa1346740:CDS | 50.0% | |
TCAAGTGACCACCGTGTGAT+GGG | - | tig0009218:32313-32332 | None:intergenic | 50.0% | |
ATCAAGTGACCACCGTGTGA+TGG | - | tig0009218:32314-32333 | None:intergenic | 50.0% | |
ATCACACGGTGGTCACTTGA+TGG | + | tig0009218:32313-32332 | Msa1346740:CDS | 50.0% | |
ATTGAATCCGGCTCTTGGAC+AGG | + | tig0009218:32388-32407 | Msa1346740:CDS | 50.0% | |
! | AAGGAGCTGGATTGGGACTT+GGG | + | tig0009218:32435-32454 | Msa1346740:CDS | 50.0% |
! | GGACTTGGGAATTTGCTTGG+AGG | + | tig0009218:32449-32468 | Msa1346740:CDS | 50.0% |
! | GGGAATTTGCTTGGAGGTCT+TGG | + | tig0009218:32455-32474 | Msa1346740:CDS | 50.0% |
TGATTACCATACGCAGCAGC+AGG | - | tig0009218:32509-32528 | None:intergenic | 50.0% | |
TGCTGCTGCGTATGGTAATC+AGG | + | tig0009218:32508-32527 | Msa1346740:CDS | 50.0% | |
!! | CGGCTTGTTTGGTGGGTTCA+GGG | - | tig0009218:31182-31201 | None:intergenic | 55.0% |
!! | TCGGCTTGTTTGGTGGGTTC+AGG | - | tig0009218:31183-31202 | None:intergenic | 55.0% |
! | TCGGGTTCGGCTTGTTTGGT+GGG | - | tig0009218:31189-31208 | None:intergenic | 55.0% |
! | TTCGGGTTCGGCTTGTTTGG+TGG | - | tig0009218:31190-31209 | None:intergenic | 55.0% |
CGTGTCGGATCAGACTGTGA+AGG | + | tig0009218:31422-31441 | Msa1346740:CDS | 55.0% | |
GTCGGATCAGACTGTGAAGG+TGG | + | tig0009218:31425-31444 | Msa1346740:CDS | 55.0% | |
GTGAAGGTGGAAGCTAACGG+TGG | + | tig0009218:31438-31457 | Msa1346740:CDS | 55.0% | |
AAGGTGGAAGCTAACGGTGG+TGG | + | tig0009218:31441-31460 | Msa1346740:CDS | 55.0% | |
TGTTCGTCAGCTGGCTGATG+TGG | + | tig0009218:31608-31627 | Msa1346740:CDS | 55.0% | |
! | TCGTGTCAATTGGCTTCGGC+TGG | + | tig0009218:31855-31874 | Msa1346740:CDS | 55.0% |
! | GGATGATGGTCCATTGGGGT+TGG | + | tig0009218:32010-32029 | Msa1346740:CDS | 55.0% |
GTCGCCTTATCCAACCCCAA+TGG | - | tig0009218:32023-32042 | None:intergenic | 55.0% | |
TTGGGGTTGGATAAGGCGAC+TGG | + | tig0009218:32023-32042 | Msa1346740:CDS | 55.0% | |
TGGGGTTGGATAAGGCGACT+GGG | + | tig0009218:32024-32043 | Msa1346740:CDS | 55.0% | |
! | GGCGTTGGAAGAGCCGAATA+AGG | + | tig0009218:32100-32119 | Msa1346740:CDS | 55.0% |
! | CCCCCCTTGTTGTAACCCTT+AGG | - | tig0009218:32170-32189 | None:intergenic | 55.0% |
TCGCATCATCACCATCACGG+TGG | + | tig0009218:32230-32249 | Msa1346740:CDS | 55.0% | |
CATCATCACCATCACGGTGG+TGG | + | tig0009218:32233-32252 | Msa1346740:CDS | 55.0% | |
! | GGTCACTTGATGGCTCCTAC+TGG | + | tig0009218:32323-32342 | Msa1346740:CDS | 55.0% |
CAGGGATTGAATCCGGCTCT+TGG | + | tig0009218:32383-32402 | Msa1346740:CDS | 55.0% | |
GACAAAGCCTGTCCAAGAGC+CGG | - | tig0009218:32398-32417 | None:intergenic | 55.0% | |
! | CAAGGAGCTGGATTGGGACT+TGG | + | tig0009218:32434-32453 | Msa1346740:CDS | 55.0% |
GGAGGACCAGCTTGATTCAC+CGG | - | tig0009218:32488-32507 | None:intergenic | 55.0% | |
TTACCATACGCAGCAGCAGG+AGG | - | tig0009218:32506-32525 | None:intergenic | 55.0% | |
CTATGGGATATGGCCAGCCT+GGG | + | tig0009218:32534-32553 | Msa1346740:CDS | 55.0% | |
TGGTATTGTGGCTGCAACCC+AGG | - | tig0009218:32554-32573 | None:intergenic | 55.0% | |
CTTGACCCAGCTGAGGATTC+TGG | - | tig0009218:32574-32593 | None:intergenic | 55.0% | |
CAGAATCCTCAGCTGGGTCA+AGG | + | tig0009218:32572-32591 | Msa1346740:CDS | 55.0% | |
AATCCTCAGCTGGGTCAAGG+TGG | + | tig0009218:32575-32594 | Msa1346740:CDS | 55.0% | |
! | GGTGGTGTTAGACCTCATCC+TGG | + | tig0009218:32596-32615 | Msa1346740:CDS | 55.0% |
GTTAGACCTCATCCTGGTCC+CGG | + | tig0009218:32602-32621 | Msa1346740:CDS | 55.0% | |
!! | CGGCTTGTTTGGTGGGTTCA+GGG | - | tig0009218:31182-31201 | None:intergenic | 55.0% |
!! | TCGGCTTGTTTGGTGGGTTC+AGG | - | tig0009218:31183-31202 | None:intergenic | 55.0% |
! | TCGGGTTCGGCTTGTTTGGT+GGG | - | tig0009218:31189-31208 | None:intergenic | 55.0% |
! | TTCGGGTTCGGCTTGTTTGG+TGG | - | tig0009218:31190-31209 | None:intergenic | 55.0% |
CGTGTCGGATCAGACTGTGA+AGG | + | tig0009218:31422-31441 | Msa1346740:CDS | 55.0% | |
GTCGGATCAGACTGTGAAGG+TGG | + | tig0009218:31425-31444 | Msa1346740:CDS | 55.0% | |
GTGAAGGTGGAAGCTAACGG+TGG | + | tig0009218:31438-31457 | Msa1346740:CDS | 55.0% | |
AAGGTGGAAGCTAACGGTGG+TGG | + | tig0009218:31441-31460 | Msa1346740:CDS | 55.0% | |
TGTTCGTCAGCTGGCTGATG+TGG | + | tig0009218:31608-31627 | Msa1346740:CDS | 55.0% | |
! | TCGTGTCAATTGGCTTCGGC+TGG | + | tig0009218:31855-31874 | Msa1346740:CDS | 55.0% |
! | GGATGATGGTCCATTGGGGT+TGG | + | tig0009218:32010-32029 | Msa1346740:CDS | 55.0% |
GTCGCCTTATCCAACCCCAA+TGG | - | tig0009218:32023-32042 | None:intergenic | 55.0% | |
TTGGGGTTGGATAAGGCGAC+TGG | + | tig0009218:32023-32042 | Msa1346740:CDS | 55.0% | |
TGGGGTTGGATAAGGCGACT+GGG | + | tig0009218:32024-32043 | Msa1346740:CDS | 55.0% | |
! | GGCGTTGGAAGAGCCGAATA+AGG | + | tig0009218:32100-32119 | Msa1346740:CDS | 55.0% |
! | CCCCCCTTGTTGTAACCCTT+AGG | - | tig0009218:32170-32189 | None:intergenic | 55.0% |
TCGCATCATCACCATCACGG+TGG | + | tig0009218:32230-32249 | Msa1346740:CDS | 55.0% | |
CATCATCACCATCACGGTGG+TGG | + | tig0009218:32233-32252 | Msa1346740:CDS | 55.0% | |
! | GGTCACTTGATGGCTCCTAC+TGG | + | tig0009218:32323-32342 | Msa1346740:CDS | 55.0% |
CAGGGATTGAATCCGGCTCT+TGG | + | tig0009218:32383-32402 | Msa1346740:CDS | 55.0% | |
GACAAAGCCTGTCCAAGAGC+CGG | - | tig0009218:32398-32417 | None:intergenic | 55.0% | |
! | CAAGGAGCTGGATTGGGACT+TGG | + | tig0009218:32434-32453 | Msa1346740:CDS | 55.0% |
GGAGGACCAGCTTGATTCAC+CGG | - | tig0009218:32488-32507 | None:intergenic | 55.0% | |
TTACCATACGCAGCAGCAGG+AGG | - | tig0009218:32506-32525 | None:intergenic | 55.0% | |
CTATGGGATATGGCCAGCCT+GGG | + | tig0009218:32534-32553 | Msa1346740:CDS | 55.0% | |
TGGTATTGTGGCTGCAACCC+AGG | - | tig0009218:32554-32573 | None:intergenic | 55.0% | |
CTTGACCCAGCTGAGGATTC+TGG | - | tig0009218:32574-32593 | None:intergenic | 55.0% | |
CAGAATCCTCAGCTGGGTCA+AGG | + | tig0009218:32572-32591 | Msa1346740:CDS | 55.0% | |
AATCCTCAGCTGGGTCAAGG+TGG | + | tig0009218:32575-32594 | Msa1346740:CDS | 55.0% | |
! | GGTGGTGTTAGACCTCATCC+TGG | + | tig0009218:32596-32615 | Msa1346740:CDS | 55.0% |
GTTAGACCTCATCCTGGTCC+CGG | + | tig0009218:32602-32621 | Msa1346740:CDS | 55.0% | |
! | GGGTTCGGGTTCGGCTTGTT+TGG | - | tig0009218:31193-31212 | None:intergenic | 60.0% |
! | AGCATCGGACTGGGTGTCGT+CGG | + | tig0009218:31790-31809 | Msa1346740:CDS | 60.0% |
TCAGACACCGGTGGCGCATT+CGG | - | tig0009218:31900-31919 | None:intergenic | 60.0% | |
TAAGGCGACTGGGAAGCCGA+AGG | + | tig0009218:32034-32053 | Msa1346740:CDS | 60.0% | |
AAGGCGACTGGGAAGCCGAA+GGG | + | tig0009218:32035-32054 | Msa1346740:CDS | 60.0% | |
! | CATCACCATCACGGTGGTGG+TGG | + | tig0009218:32236-32255 | Msa1346740:CDS | 60.0% |
ATGGCTCCTACTGGTCCTGC+TGG | + | tig0009218:32332-32351 | Msa1346740:CDS | 60.0% | |
GCGTTGTAACCACCACCAGC+AGG | - | tig0009218:32350-32369 | None:intergenic | 60.0% | |
!! | GCTGGTGGTGGTTACAACGC+CGG | + | tig0009218:32350-32369 | Msa1346740:CDS | 60.0% |
TGGTTACAACGCCGGTGTGC+CGG | + | tig0009218:32358-32377 | Msa1346740:CDS | 60.0% | |
! | GCCGGCTCAGGGATTGAATC+CGG | + | tig0009218:32376-32395 | Msa1346740:CDS | 60.0% |
GCCGGATTCAATCCCTGAGC+CGG | - | tig0009218:32380-32399 | None:intergenic | 60.0% | |
GCTATGGGATATGGCCAGCC+TGG | + | tig0009218:32533-32552 | Msa1346740:CDS | 60.0% | |
ATTGTGGCTGCAACCCAGGC+TGG | - | tig0009218:32550-32569 | None:intergenic | 60.0% | |
!! | ACCCATGTAAGGAGCGCCAC+CGG | - | tig0009218:32624-32643 | None:intergenic | 60.0% |
! | GGGTTCGGGTTCGGCTTGTT+TGG | - | tig0009218:31193-31212 | None:intergenic | 60.0% |
! | AGCATCGGACTGGGTGTCGT+CGG | + | tig0009218:31790-31809 | Msa1346740:CDS | 60.0% |
TCAGACACCGGTGGCGCATT+CGG | - | tig0009218:31900-31919 | None:intergenic | 60.0% | |
TAAGGCGACTGGGAAGCCGA+AGG | + | tig0009218:32034-32053 | Msa1346740:CDS | 60.0% | |
AAGGCGACTGGGAAGCCGAA+GGG | + | tig0009218:32035-32054 | Msa1346740:CDS | 60.0% | |
! | CATCACCATCACGGTGGTGG+TGG | + | tig0009218:32236-32255 | Msa1346740:CDS | 60.0% |
ATGGCTCCTACTGGTCCTGC+TGG | + | tig0009218:32332-32351 | Msa1346740:CDS | 60.0% | |
GCGTTGTAACCACCACCAGC+AGG | - | tig0009218:32350-32369 | None:intergenic | 60.0% | |
!! | GCTGGTGGTGGTTACAACGC+CGG | + | tig0009218:32350-32369 | Msa1346740:CDS | 60.0% |
TGGTTACAACGCCGGTGTGC+CGG | + | tig0009218:32358-32377 | Msa1346740:CDS | 60.0% | |
! | GCCGGCTCAGGGATTGAATC+CGG | + | tig0009218:32376-32395 | Msa1346740:CDS | 60.0% |
GCCGGATTCAATCCCTGAGC+CGG | - | tig0009218:32380-32399 | None:intergenic | 60.0% | |
GCTATGGGATATGGCCAGCC+TGG | + | tig0009218:32533-32552 | Msa1346740:CDS | 60.0% | |
ATTGTGGCTGCAACCCAGGC+TGG | - | tig0009218:32550-32569 | None:intergenic | 60.0% | |
!! | ACCCATGTAAGGAGCGCCAC+CGG | - | tig0009218:32624-32643 | None:intergenic | 60.0% |
CTGATGTGGACCCCGCTCAC+CGG | + | tig0009218:31622-31641 | Msa1346740:CDS | 65.0% | |
! | GCATCGGACTGGGTGTCGTC+GGG | + | tig0009218:31791-31810 | Msa1346740:CDS | 65.0% |
GGCTTCGGCTGGACCTGTTC+CGG | + | tig0009218:31866-31885 | Msa1346740:CDS | 65.0% | |
TTCGGTGGAGGAGCCGGAAC+AGG | - | tig0009218:31882-31901 | None:intergenic | 65.0% | |
TCCTCCACCGAATGCGCCAC+CGG | + | tig0009218:31890-31909 | Msa1346740:CDS | 65.0% | |
!! | CACCATCACGGTGGTGGTGG+TGG | + | tig0009218:32239-32258 | Msa1346740:CDS | 65.0% |
GACCACCACCACCACCGTGA+TGG | - | tig0009218:32244-32263 | None:intergenic | 65.0% | |
!! | GGTGGTGGTGGCCCATCACA+CGG | + | tig0009218:32299-32318 | Msa1346740:CDS | 65.0% |
GCTCCTACTGGTCCTGCTGG+TGG | + | tig0009218:32335-32354 | Msa1346740:CDS | 65.0% | |
CCACCACCAGCAGGACCAGT+AGG | - | tig0009218:32341-32360 | None:intergenic | 65.0% | |
CCTACTGGTCCTGCTGGTGG+TGG | + | tig0009218:32338-32357 | Msa1346740:CDS | 65.0% | |
CAATCCCTGAGCCGGCACAC+CGG | - | tig0009218:32372-32391 | None:intergenic | 65.0% | |
!! | TGGAGGTCTTGGTGGTGCGC+CGG | + | tig0009218:32466-32485 | Msa1346740:CDS | 65.0% |
! | GGTGCGCCGGTGAATCAAGC+TGG | + | tig0009218:32479-32498 | Msa1346740:CDS | 65.0% |
GGTCCTCCTGCTGCTGCGTA+TGG | + | tig0009218:32500-32519 | Msa1346740:CDS | 65.0% | |
CCACCACCTTGACCCAGCTG+AGG | - | tig0009218:32581-32600 | None:intergenic | 65.0% | |
CCTCAGCTGGGTCAAGGTGG+TGG | + | tig0009218:32578-32597 | Msa1346740:CDS | 65.0% | |
AGACCTCATCCTGGTCCCGG+TGG | + | tig0009218:32605-32624 | Msa1346740:CDS | 65.0% | |
TCCCGGTGGCGCTCCTTACA+TGG | + | tig0009218:32619-32638 | Msa1346740:CDS | 65.0% | |
!! | CCCATGTAAGGAGCGCCACC+GGG | - | tig0009218:32623-32642 | None:intergenic | 65.0% |
CCCGGTGGCGCTCCTTACAT+GGG | + | tig0009218:32620-32639 | Msa1346740:CDS | 65.0% | |
CTGATGTGGACCCCGCTCAC+CGG | + | tig0009218:31622-31641 | Msa1346740:CDS | 65.0% | |
! | GCATCGGACTGGGTGTCGTC+GGG | + | tig0009218:31791-31810 | Msa1346740:CDS | 65.0% |
GGCTTCGGCTGGACCTGTTC+CGG | + | tig0009218:31866-31885 | Msa1346740:CDS | 65.0% | |
TTCGGTGGAGGAGCCGGAAC+AGG | - | tig0009218:31882-31901 | None:intergenic | 65.0% | |
TCCTCCACCGAATGCGCCAC+CGG | + | tig0009218:31890-31909 | Msa1346740:CDS | 65.0% | |
!! | CACCATCACGGTGGTGGTGG+TGG | + | tig0009218:32239-32258 | Msa1346740:CDS | 65.0% |
GACCACCACCACCACCGTGA+TGG | - | tig0009218:32244-32263 | None:intergenic | 65.0% | |
!! | GGTGGTGGTGGCCCATCACA+CGG | + | tig0009218:32299-32318 | Msa1346740:CDS | 65.0% |
GCTCCTACTGGTCCTGCTGG+TGG | + | tig0009218:32335-32354 | Msa1346740:CDS | 65.0% | |
CCACCACCAGCAGGACCAGT+AGG | - | tig0009218:32341-32360 | None:intergenic | 65.0% | |
CCTACTGGTCCTGCTGGTGG+TGG | + | tig0009218:32338-32357 | Msa1346740:CDS | 65.0% | |
CAATCCCTGAGCCGGCACAC+CGG | - | tig0009218:32372-32391 | None:intergenic | 65.0% | |
!! | TGGAGGTCTTGGTGGTGCGC+CGG | + | tig0009218:32466-32485 | Msa1346740:CDS | 65.0% |
! | GGTGCGCCGGTGAATCAAGC+TGG | + | tig0009218:32479-32498 | Msa1346740:CDS | 65.0% |
GGTCCTCCTGCTGCTGCGTA+TGG | + | tig0009218:32500-32519 | Msa1346740:CDS | 65.0% | |
CCACCACCTTGACCCAGCTG+AGG | - | tig0009218:32581-32600 | None:intergenic | 65.0% | |
CCTCAGCTGGGTCAAGGTGG+TGG | + | tig0009218:32578-32597 | Msa1346740:CDS | 65.0% | |
AGACCTCATCCTGGTCCCGG+TGG | + | tig0009218:32605-32624 | Msa1346740:CDS | 65.0% | |
TCCCGGTGGCGCTCCTTACA+TGG | + | tig0009218:32619-32638 | Msa1346740:CDS | 65.0% | |
!! | CCCATGTAAGGAGCGCCACC+GGG | - | tig0009218:32623-32642 | None:intergenic | 65.0% |
CCCGGTGGCGCTCCTTACAT+GGG | + | tig0009218:32620-32639 | Msa1346740:CDS | 65.0% | |
! | GGCGCATTCGGTGGAGGAGC+CGG | - | tig0009218:31888-31907 | None:intergenic | 70.0% |
! | ACCGGTGGCGCATTCGGTGG+AGG | - | tig0009218:31894-31913 | None:intergenic | 70.0% |
GACACCGGTGGCGCATTCGG+TGG | - | tig0009218:31897-31916 | None:intergenic | 70.0% | |
! | GGTGGTGGCCCATCACACGG+TGG | + | tig0009218:32302-32321 | Msa1346740:CDS | 70.0% |
!! | AACGCCGGTGTGCCGGCTCA+GGG | + | tig0009218:32365-32384 | Msa1346740:CDS | 70.0% |
!! | TAAGGAGCGCCACCGGGACC+AGG | - | tig0009218:32617-32636 | None:intergenic | 70.0% |
! | GGCGCATTCGGTGGAGGAGC+CGG | - | tig0009218:31888-31907 | None:intergenic | 70.0% |
! | ACCGGTGGCGCATTCGGTGG+AGG | - | tig0009218:31894-31913 | None:intergenic | 70.0% |
GACACCGGTGGCGCATTCGG+TGG | - | tig0009218:31897-31916 | None:intergenic | 70.0% | |
! | GGTGGTGGCCCATCACACGG+TGG | + | tig0009218:32302-32321 | Msa1346740:CDS | 70.0% |
!! | AACGCCGGTGTGCCGGCTCA+GGG | + | tig0009218:32365-32384 | Msa1346740:CDS | 70.0% |
!! | TAAGGAGCGCCACCGGGACC+AGG | - | tig0009218:32617-32636 | None:intergenic | 70.0% |
!! | CAACGCCGGTGTGCCGGCTC+AGG | + | tig0009218:32364-32383 | Msa1346740:CDS | 75.0% |
GCGCCACCGGGACCAGGATG+AGG | - | tig0009218:32611-32630 | None:intergenic | 75.0% | |
!! | CAACGCCGGTGTGCCGGCTC+AGG | + | tig0009218:32364-32383 | Msa1346740:CDS | 75.0% |
GCGCCACCGGGACCAGGATG+AGG | - | tig0009218:32611-32630 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
tig0009218 | gene | 31147 | 32649 | 31147 | ID=Msa1346740;Name=Msa1346740 |
tig0009218 | mRNA | 31147 | 32649 | 31147 | ID=Msa1346740-mRNA-1;Parent=Msa1346740;Name=Msa1346740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|500 |
tig0009218 | exon | 31147 | 32649 | 31147 | ID=Msa1346740-mRNA-1:exon:5617;Parent=Msa1346740-mRNA-1 |
tig0009218 | CDS | 31147 | 32649 | 31147 | ID=Msa1346740-mRNA-1:cds;Parent=Msa1346740-mRNA-1 |
Gene Sequence |
Protein sequence |