AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1346740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346740 MtrunA17_Chr5g0440831 96.800 500 13 3 1 500 1 497 0.0 962
Msa1346740 MtrunA17_Chr7g0255011 52.357 403 145 9 121 494 82 466 1.67e-109 334
Msa1346740 MtrunA17_Chr8g0360551 46.341 246 119 5 99 342 12 246 3.85e-60 204
Msa1346740 MtrunA17_Chr4g0045921 43.049 223 118 1 120 342 30 243 1.13e-58 197
Msa1346740 MtrunA17_Chr3g0144311 40.625 96 52 1 162 257 25 115 1.71e-18 85.9
Msa1346740 MtrunA17_Chr1g0186351 24.265 272 184 5 161 415 1 267 2.02e-18 87.8
Msa1346740 MtrunA17_Chr2g0290191 25.000 192 120 4 161 338 1 182 1.00e-16 82.8
Msa1346740 MtrunA17_Chr5g0447761 25.532 282 158 10 167 420 7 264 1.80e-16 82.0
Msa1346740 MtrunA17_Chr6g0449481 26.163 172 118 3 167 337 46 209 3.33e-16 80.5
Msa1346740 MtrunA17_Chr5g0426311 40.741 81 48 0 162 242 12 92 8.47e-16 77.8
Msa1346740 MtrunA17_Chr8g0346011 40.964 83 49 0 162 244 33 115 3.67e-15 76.3
Msa1346740 MtrunA17_Chr3g0101061 24.590 183 120 3 167 338 41 216 1.11e-14 76.6
Msa1346740 MtrunA17_Chr7g0276531 38.554 83 51 0 162 244 14 96 1.75e-14 73.6
Msa1346740 MtrunA17_Chr3g0127751 37.931 87 54 0 162 248 22 108 2.47e-14 72.8
Msa1346740 MtrunA17_Chr4g0017401 38.554 83 51 0 162 244 12 94 2.76e-14 73.2
Msa1346740 MtrunA17_Chr5g0402191 24.224 161 114 3 166 326 4 156 4.82e-14 73.9
Msa1346740 MtrunA17_Chr3g0120721 24.375 160 113 2 167 326 19 170 2.10e-13 71.6
Msa1346740 MtrunA17_Chr8g0375101 23.602 161 115 4 166 326 4 156 3.57e-13 70.9
Msa1346740 MtrunA17_Chr8g0383661 28.230 209 124 5 147 339 183 381 4.47e-13 71.6
Msa1346740 MtrunA17_Chr1g0210241 38.158 76 46 1 167 241 8 83 4.82e-12 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1346740 AT2G41060.1 48.062 516 185 16 1 499 1 450 4.57e-130 385
Msa1346740 AT2G41060.3 48.062 516 185 16 1 499 1 450 4.57e-130 385
Msa1346740 AT2G41060.2 48.062 516 185 16 1 499 1 450 4.57e-130 385
Msa1346740 AT3G56860.9 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.11 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.8 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.5 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.7 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.2 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.6 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.10 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.3 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.1 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G56860.4 55.932 413 131 12 114 500 91 478 6.96e-129 384
Msa1346740 AT3G15010.1 44.889 225 120 1 119 343 28 248 9.47e-61 205
Msa1346740 AT3G15010.2 44.889 225 120 1 119 343 28 248 9.47e-61 205
Msa1346740 AT2G22090.1 48.462 130 67 0 119 248 57 186 3.15e-35 135
Msa1346740 AT2G22090.1 40.000 90 54 0 258 347 100 189 7.16e-13 70.1
Msa1346740 AT2G22090.2 49.606 127 64 0 119 245 57 183 4.67e-35 134
Msa1346740 AT2G22090.2 40.000 90 54 0 258 347 100 189 7.24e-13 70.5
Msa1346740 AT2G22100.1 44.681 141 71 1 113 253 110 243 2.17e-33 130
Msa1346740 AT2G19380.1 45.802 131 71 0 115 245 357 487 1.08e-31 129
Msa1346740 AT1G76460.1 42.424 99 50 2 162 254 20 117 1.12e-17 84.0
Msa1346740 AT1G20880.2 43.373 83 47 0 162 244 20 102 1.49e-17 83.2
Msa1346740 AT1G20880.3 43.373 83 47 0 162 244 20 102 1.49e-17 83.2
Msa1346740 AT1G20880.1 43.373 83 47 0 162 244 20 102 1.49e-17 83.2
Msa1346740 AT5G40490.1 26.163 172 118 2 167 337 43 206 4.51e-17 84.0
Msa1346740 AT1G22330.1 40.000 90 53 1 162 250 13 102 4.92e-16 79.0
Msa1346740 AT1G22330.1 32.075 106 66 1 255 354 10 115 2.50e-11 65.1
Msa1346740 AT3G07810.2 25.397 189 113 4 167 338 7 184 5.35e-16 80.9
Msa1346740 AT3G07810.1 25.397 189 113 4 167 338 7 184 6.66e-16 80.5
Msa1346740 AT1G17640.2 27.564 156 108 3 167 322 67 217 7.89e-16 79.7
Msa1346740 AT1G17640.1 27.564 156 108 3 167 322 67 217 7.89e-16 79.7
Msa1346740 AT1G17640.3 27.564 156 108 3 167 322 67 217 7.89e-16 79.7
Msa1346740 AT4G26650.1 25.543 184 124 3 167 338 16 198 1.53e-15 79.3
Msa1346740 AT2G46780.1 38.947 95 58 0 160 254 16 110 1.71e-15 78.2
Msa1346740 AT2G46780.2 38.947 95 58 0 160 254 16 110 1.71e-15 78.2
Msa1346740 AT4G26650.2 25.543 184 124 3 167 338 13 195 1.71e-15 79.3
Msa1346740 AT1G78260.1 39.506 81 49 0 162 242 13 93 2.22e-15 77.0
Msa1346740 AT5G55550.5 24.576 236 139 7 167 375 7 230 2.24e-15 79.0
Msa1346740 AT5G55550.4 24.576 236 139 7 167 375 7 230 2.24e-15 79.0
Msa1346740 AT5G55550.9 24.576 236 139 7 167 375 7 230 2.24e-15 79.0
Msa1346740 AT5G55550.7 24.576 236 139 7 167 375 7 230 2.24e-15 79.0
Msa1346740 AT5G55550.1 24.576 236 139 7 167 375 7 230 2.24e-15 79.0
Msa1346740 AT5G55550.2 24.865 185 121 4 167 338 7 186 3.62e-15 78.2
Msa1346740 AT5G55550.3 24.865 185 121 4 167 338 7 186 3.62e-15 78.2
Msa1346740 AT5G55550.6 24.865 185 121 4 167 338 7 186 3.62e-15 78.2
Msa1346740 AT5G55550.11 24.865 185 121 4 167 338 7 186 3.62e-15 78.2
Msa1346740 AT1G78260.2 39.506 81 49 0 162 242 13 93 8.53e-15 75.1
Msa1346740 AT5G47620.1 23.280 189 115 3 167 338 7 182 8.73e-15 77.0
Msa1346740 AT5G47620.2 23.280 189 115 3 167 338 7 182 8.73e-15 77.0
Msa1346740 AT5G47620.5 23.280 189 115 3 167 338 7 182 8.73e-15 77.0
Msa1346740 AT4G36960.1 24.157 178 116 4 166 338 3 166 9.28e-15 76.3
Msa1346740 AT4G36960.2 24.157 178 116 4 166 338 3 166 9.28e-15 76.3
Msa1346740 AT3G06970.1 43.590 78 44 0 167 244 13 90 1.11e-14 75.5
Msa1346740 AT1G22910.1 40.964 83 49 0 162 244 9 91 2.20e-14 73.6
Msa1346740 AT1G22910.2 40.964 83 49 0 162 244 9 91 2.67e-14 73.2
Msa1346740 AT1G22910.3 40.964 83 49 0 162 244 9 91 2.57e-13 71.6
Msa1346740 AT5G53680.1 36.364 99 59 1 160 254 7 105 2.60e-13 68.6
Msa1346740 AT4G14300.1 21.939 196 125 4 161 338 1 186 4.36e-13 71.6
Msa1346740 AT4G14300.2 21.939 196 125 4 161 338 1 186 4.36e-13 71.6
Msa1346740 AT2G33410.1 22.652 181 130 2 167 338 7 186 5.19e-13 71.2
Msa1346740 AT1G33470.3 37.349 83 52 0 162 244 3 85 5.50e-13 69.3
Msa1346740 AT1G33470.2 37.349 83 52 0 162 244 3 85 8.20e-13 68.6
Msa1346740 AT1G33470.1 37.349 83 52 0 162 244 3 85 8.48e-13 68.6
Msa1346740 AT3G13224.3 24.845 161 115 1 166 326 10 164 1.90e-12 68.9
Msa1346740 AT5G40490.2 24.823 141 98 1 186 326 45 177 2.25e-12 69.3
Msa1346740 AT3G54770.1 38.554 83 51 0 162 244 13 95 2.63e-12 67.4
Msa1346740 AT3G13224.2 24.375 160 115 1 167 326 20 173 2.92e-12 68.6
Msa1346740 AT3G54770.3 38.554 83 51 0 162 244 13 95 3.18e-12 67.4
Msa1346740 AT5G11412.1 36.471 85 54 0 160 244 46 130 1.54e-11 63.5
Msa1346740 AT1G60650.2 36.842 76 47 1 167 241 13 88 1.95e-11 65.5
Msa1346740 AT1G60650.1 36.842 76 47 1 167 241 13 88 1.95e-11 65.5
Msa1346740 AT5G53720.1 38.462 78 48 0 167 244 10 87 2.22e-11 60.8
Msa1346740 AT4G24770.1 23.626 182 132 5 167 344 151 329 3.27e-11 65.1
Msa1346740 AT4G24770.2 23.626 182 132 5 167 344 151 329 3.27e-11 65.1

Find 176 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATCGAAGCTTTCGTTTCT+TGG 0.186412 tig0009218:-31151 None:intergenic
TCGGCTTGTTTGGTGGGTTC+AGG 0.212017 tig0009218:-31180 None:intergenic
TACTTCTTCTTGTTGGGGTT+CGG 0.223272 tig0009218:-31205 None:intergenic
GGGAATTTGCTTGGAGGTCT+TGG 0.253466 tig0009218:+32455 Msa1346740:CDS
TTCGGCTACTTCTTCTTGTT+GGG 0.255517 tig0009218:-31211 None:intergenic
CTTCGGCTACTTCTTCTTGT+TGG 0.283404 tig0009218:-31212 None:intergenic
ACTTCTTCTTGTTGGGGTTC+GGG 0.291185 tig0009218:-31204 None:intergenic
TCCCGGTGGCGCTCCTTACA+TGG 0.295626 tig0009218:+32619 Msa1346740:CDS
ATTTCTTCTTCTTGTGTTGT+TGG 0.303042 tig0009218:-31240 None:intergenic
GCTGTGACTGATAAGAATTC+TGG 0.318324 tig0009218:+31735 Msa1346740:CDS
TTCGGGTTCGGCTTGTTTGG+TGG 0.320019 tig0009218:-31187 None:intergenic
CTTGACCCAGCTGAGGATTC+TGG 0.326079 tig0009218:-32571 None:intergenic
TTCTTGTTGGGGTTCGGGTT+CGG 0.334657 tig0009218:-31199 None:intergenic
AAAATCTTTGTTCATGGTCT+TGG 0.349785 tig0009218:+31645 Msa1346740:CDS
TGCTGCTGCGTATGGTAATC+AGG 0.354467 tig0009218:+32508 Msa1346740:CDS
GAGGTGGATGATGGTCCATT+GGG 0.357481 tig0009218:+32005 Msa1346740:CDS
TGTCCCTCGAACACCTTATT+CGG 0.360117 tig0009218:-32113 None:intergenic
CAACGCCGGTGTGCCGGCTC+AGG 0.360674 tig0009218:+32364 Msa1346740:CDS
GCTATGGGATATGGCCAGCC+TGG 0.363089 tig0009218:+32533 Msa1346740:CDS
TGAGGTTGATCTTCTTCAAT+CGG 0.376109 tig0009218:-31267 None:intergenic
CACCGGAAAATCTTTGTTCA+TGG 0.376446 tig0009218:+31639 Msa1346740:CDS
GGCTTCGGCTGGACCTGTTC+CGG 0.376743 tig0009218:+31866 Msa1346740:CDS
CGGCTTGTTTGGTGGGTTCA+GGG 0.376961 tig0009218:-31179 None:intergenic
AATCAGGCTGCTATGGGATA+TGG 0.385926 tig0009218:+32524 Msa1346740:CDS
CTTTGTTCATGGTCTTGGTT+GGG 0.386488 tig0009218:+31650 Msa1346740:CDS
CAAGGAGCTGGATTGGGACT+TGG 0.389500 tig0009218:+32434 Msa1346740:CDS
GGGTTCGGGTTCGGCTTGTT+TGG 0.394301 tig0009218:-31190 None:intergenic
TTGGGACTTGGGAATTTGCT+TGG 0.397145 tig0009218:+32446 Msa1346740:CDS
TTGTGTTGTTGGTTCTTCTT+CGG 0.397521 tig0009218:-31229 None:intergenic
AAGCAGCCGCAGAAAGTGAT+TGG 0.406418 tig0009218:+31819 Msa1346740:CDS
ACAAGAGGAAGATCTTGAAT+TGG 0.407627 tig0009218:+31485 Msa1346740:CDS
CAGGGATTGAATCCGGCTCT+TGG 0.407933 tig0009218:+32383 Msa1346740:CDS
TTCGGTGGAGGAGCCGGAAC+AGG 0.417847 tig0009218:-31879 None:intergenic
TGCTAATCAAGGAGCTGGAT+TGG 0.425869 tig0009218:+32427 Msa1346740:CDS
GGACTTGGGAATTTGCTTGG+AGG 0.433363 tig0009218:+32449 Msa1346740:CDS
TCTGCTTTGCTTGCTAATCA+AGG 0.433664 tig0009218:+32416 Msa1346740:CDS
TATTGTCAGAAGGCTGTTGA+TGG 0.441220 tig0009218:+32143 Msa1346740:CDS
TCAGACACCGGTGGCGCATT+CGG 0.442681 tig0009218:-31897 None:intergenic
ATCACACGGTGGTCACTTGA+TGG 0.443713 tig0009218:+32313 Msa1346740:CDS
CGAACATTCTCAGACAGATC+TGG 0.446657 tig0009218:-31591 None:intergenic
TGGTATTGTGGCTGCAACCC+AGG 0.451026 tig0009218:-32551 None:intergenic
GGCGCATTCGGTGGAGGAGC+CGG 0.453295 tig0009218:-31885 None:intergenic
GAGGTTGATCTTCTTCAATC+GGG 0.454540 tig0009218:-31266 None:intergenic
TGGTTACAACGCCGGTGTGC+CGG 0.455193 tig0009218:+32358 Msa1346740:CDS
GCTAATCAAGGAGCTGGATT+GGG 0.456434 tig0009218:+32428 Msa1346740:CDS
CGGTGAAATTGAAGATTGTA+AGG 0.458299 tig0009218:+31713 Msa1346740:CDS
TCTTTGTTCATGGTCTTGGT+TGG 0.459374 tig0009218:+31649 Msa1346740:CDS
TGTAATTGCTCCTTCGTGAA+TGG 0.461004 tig0009218:-31537 None:intergenic
TAGGACTACATCGTGTCAAT+TGG 0.462310 tig0009218:+31845 Msa1346740:CDS
CGCAGAAAGTGATTGGGAAT+AGG 0.466923 tig0009218:+31826 Msa1346740:CDS
TGGTCCATTGGGGTTGGATA+AGG 0.467413 tig0009218:+32016 Msa1346740:CDS
GTATGGTAATCAGGCTGCTA+TGG 0.467614 tig0009218:+32517 Msa1346740:CDS
GGCGTTGGAAGAGCCGAATA+AGG 0.467801 tig0009218:+32100 Msa1346740:CDS
ATTGAATCCGGCTCTTGGAC+AGG 0.468734 tig0009218:+32388 Msa1346740:CDS
CCTCAGCTGGGTCAAGGTGG+TGG 0.468825 tig0009218:+32578 Msa1346740:CDS
AGCATCGGACTGGGTGTCGT+CGG 0.471058 tig0009218:+31790 Msa1346740:CDS
TCGGGTTCGGCTTGTTTGGT+GGG 0.471504 tig0009218:-31186 None:intergenic
GGAGGTTGCAGAAGATGAAG+AGG 0.471827 tig0009218:+31323 Msa1346740:CDS
ACCCATGTAAGGAGCGCCAC+CGG 0.472419 tig0009218:-32621 None:intergenic
TTGCTTGCTAATCAAGGAGC+TGG 0.472566 tig0009218:+32422 Msa1346740:CDS
GGTTCTAGAAGCTTCTCAAC+AGG 0.476416 tig0009218:-31516 None:intergenic
GCATCGGACTGGGTGTCGTC+GGG 0.476975 tig0009218:+31791 Msa1346740:CDS
TACATCGTGTCAATTGGCTT+CGG 0.478390 tig0009218:+31851 Msa1346740:CDS
GTCTGAGAATGTTCGTCAGC+TGG 0.480431 tig0009218:+31599 Msa1346740:CDS
GCCGGCTCAGGGATTGAATC+CGG 0.480635 tig0009218:+32376 Msa1346740:CDS
GAAGGCTGTTGATGGTCCTA+AGG 0.480805 tig0009218:+32151 Msa1346740:CDS
AGAGGTGGATGATGGTCCAT+TGG 0.483246 tig0009218:+32004 Msa1346740:CDS
CACCATCACGGTGGTGGTGG+TGG 0.484347 tig0009218:+32239 Msa1346740:CDS
AATTTGCTTGGAGGTCTTGG+TGG 0.484936 tig0009218:+32458 Msa1346740:CDS
CTGATGTGGACCCCGCTCAC+CGG 0.485472 tig0009218:+31622 Msa1346740:CDS
TCCTCCACCGAATGCGCCAC+CGG 0.486406 tig0009218:+31890 Msa1346740:CDS
AAGGAGCTGGATTGGGACTT+GGG 0.487129 tig0009218:+32435 Msa1346740:CDS
ATTGTGGCTGCAACCCAGGC+TGG 0.487864 tig0009218:-32547 None:intergenic
GGAGGACCAGCTTGATTCAC+CGG 0.487882 tig0009218:-32485 None:intergenic
GGTCACTTGATGGCTCCTAC+TGG 0.489465 tig0009218:+32323 Msa1346740:CDS
CGCTCCTTACATGGGTCACT+AGG 0.492696 tig0009218:+32628 Msa1346740:CDS
TCAAGTGACCACCGTGTGAT+GGG 0.493869 tig0009218:-32310 None:intergenic
ATGGCTCCTACTGGTCCTGC+TGG 0.494184 tig0009218:+32332 Msa1346740:CDS
TCGTGTCAATTGGCTTCGGC+TGG 0.495359 tig0009218:+31855 Msa1346740:CDS
GCGCCACCGGGACCAGGATG+AGG 0.495486 tig0009218:-32608 None:intergenic
ACCGGTGGCGCATTCGGTGG+AGG 0.495710 tig0009218:-31891 None:intergenic
AAGCTTTCGTTTCTTGGCCA+TGG 0.498024 tig0009218:-31145 None:intergenic
CTCACCTAGTGACCCATGTA+AGG 0.500179 tig0009218:-32632 None:intergenic
AAGTATTCACATGGTGGTGG+TGG 0.503763 tig0009218:+32287 Msa1346740:CDS
ACAATACCAGAATCCTCAGC+TGG 0.504026 tig0009218:+32565 Msa1346740:CDS
CTATGGGATATGGCCAGCCT+GGG 0.505656 tig0009218:+32534 Msa1346740:CDS
CCTACTGGTCCTGCTGGTGG+TGG 0.506260 tig0009218:+32338 Msa1346740:CDS
TGCGCTGTTTGTTTATAAGA+CGG 0.506286 tig0009218:+32061 Msa1346740:CDS
ATCAAGTGACCACCGTGTGA+TGG 0.507458 tig0009218:-32311 None:intergenic
GACGGTTGAGAGTGCTAAGA+AGG 0.508593 tig0009218:+32079 Msa1346740:CDS
GCCGGATTCAATCCCTGAGC+CGG 0.510375 tig0009218:-32377 None:intergenic
GACAAAGCCTGTCCAAGAGC+CGG 0.512535 tig0009218:-32395 None:intergenic
TAAGGAGCGCCACCGGGACC+AGG 0.518273 tig0009218:-32614 None:intergenic
TCGGCTACTTCTTCTTGTTG+GGG 0.518576 tig0009218:-31210 None:intergenic
GGATGATGGTCCATTGGGGT+TGG 0.519268 tig0009218:+32010 Msa1346740:CDS
TTGGGGTTGGATAAGGCGAC+TGG 0.520918 tig0009218:+32023 Msa1346740:CDS
AGCAGCCGCAGAAAGTGATT+GGG 0.521007 tig0009218:+31820 Msa1346740:CDS
TGATTACCATACGCAGCAGC+AGG 0.524463 tig0009218:-32506 None:intergenic
CCCGGTGGCGCTCCTTACAT+GGG 0.525317 tig0009218:+32620 Msa1346740:CDS
GTTAGACCTCATCCTGGTCC+CGG 0.526551 tig0009218:+32602 Msa1346740:CDS
AACGCCGGTGTGCCGGCTCA+GGG 0.526695 tig0009218:+32365 Msa1346740:CDS
CATCACCATCACGGTGGTGG+TGG 0.527530 tig0009218:+32236 Msa1346740:CDS
TTCAAACAACGCTGCCGTGT+CGG 0.529293 tig0009218:+31407 Msa1346740:CDS
TATGGTAATCAGGCTGCTAT+GGG 0.529499 tig0009218:+32518 Msa1346740:CDS
AGCTGAGGATTCTGGTATTG+TGG 0.529596 tig0009218:-32563 None:intergenic
GGTCCTCCTGCTGCTGCGTA+TGG 0.531826 tig0009218:+32500 Msa1346740:CDS
AGGTGAAGAAGAGCAAGAAG+AGG 0.532986 tig0009218:+31302 Msa1346740:CDS
TGGAGGTCTTGGTGGTGCGC+CGG 0.533288 tig0009218:+32466 Msa1346740:CDS
CTTTGAGTATACTCAGACAC+CGG 0.535878 tig0009218:-31909 None:intergenic
CAATAACAACGAAGAACAAG+AGG 0.537174 tig0009218:+31470 Msa1346740:CDS
TTTCAAGCAGTTTGGAGAGG+TGG 0.539323 tig0009218:+31989 Msa1346740:CDS
CCCATGTAAGGAGCGCCACC+GGG 0.540286 tig0009218:-32620 None:intergenic
CAGTTTGGAGAGGTGGATGA+TGG 0.542414 tig0009218:+31996 Msa1346740:CDS
TGTTCGTCAGCTGGCTGATG+TGG 0.543983 tig0009218:+31608 Msa1346740:CDS
TGAAGAAGAGCAAGAAGAGG+AGG 0.546641 tig0009218:+31305 Msa1346740:CDS
GACACCGGTGGCGCATTCGG+TGG 0.554738 tig0009218:-31894 None:intergenic
ACAAACAGCGCAAAACCCTT+CGG 0.556538 tig0009218:-32050 None:intergenic
CTATTCCCAATCACTTTCTG+CGG 0.566327 tig0009218:-31825 None:intergenic
TGAGAGTGCTAAGAAGGCGT+TGG 0.568548 tig0009218:+32085 Msa1346740:CDS
ACATACTTTGTATTGTCAGA+AGG 0.571263 tig0009218:+32133 Msa1346740:CDS
GCTCCTACTGGTCCTGCTGG+TGG 0.571468 tig0009218:+32335 Msa1346740:CDS
TGGTCCTAAGGGTTACAACA+AGG 0.573830 tig0009218:+32163 Msa1346740:CDS
CAGAATCCTCAGCTGGGTCA+AGG 0.575625 tig0009218:+32572 Msa1346740:CDS
GGTGGTGTTAGACCTCATCC+TGG 0.576645 tig0009218:+32596 Msa1346740:CDS
GGTGGTGGTGGCCCATCACA+CGG 0.582405 tig0009218:+32299 Msa1346740:CDS
GCGTTGTAACCACCACCAGC+AGG 0.582900 tig0009218:-32347 None:intergenic
CATCATCACCATCACGGTGG+TGG 0.584236 tig0009218:+32233 Msa1346740:CDS
AGAGCCGAATAAGGTGTTCG+AGG 0.585996 tig0009218:+32109 Msa1346740:CDS
AAGGCTGTTGATGGTCCTAA+GGG 0.587938 tig0009218:+32152 Msa1346740:CDS
GGTGCGCCGGTGAATCAAGC+TGG 0.587980 tig0009218:+32479 Msa1346740:CDS
AAGAATTCTGGAAAATCGAA+AGG 0.589314 tig0009218:+31747 Msa1346740:CDS
GTCGGATCAGACTGTGAAGG+TGG 0.597030 tig0009218:+31425 Msa1346740:CDS
GAGCCGAATAAGGTGTTCGA+GGG 0.597871 tig0009218:+32110 Msa1346740:CDS
GTCCTAAGGGTTACAACAAG+GGG 0.599613 tig0009218:+32165 Msa1346740:CDS
AGGTGGATGATGGTCCATTG+GGG 0.599675 tig0009218:+32006 Msa1346740:CDS
GGTCCTAAGGGTTACAACAA+GGG 0.601882 tig0009218:+32164 Msa1346740:CDS
AAGAAGTATTCACATGGTGG+TGG 0.603956 tig0009218:+32284 Msa1346740:CDS
CAATCCCTGAGCCGGCACAC+CGG 0.607582 tig0009218:-32369 None:intergenic
AGGTTGATCTTCTTCAATCG+GGG 0.608027 tig0009218:-31265 None:intergenic
TAAGGCGACTGGGAAGCCGA+AGG 0.612001 tig0009218:+32034 Msa1346740:CDS
TGGGGTTGGATAAGGCGACT+GGG 0.613826 tig0009218:+32024 Msa1346740:CDS
GTCGCCTTATCCAACCCCAA+TGG 0.615111 tig0009218:-32020 None:intergenic
CTAGAAAATCAACAACAAGA+AGG 0.619400 tig0009218:+31372 Msa1346740:CDS
ACACGTGCTTGTGAAGCAAG+CGG 0.622021 tig0009218:+31557 Msa1346740:CDS
CAACCTCAAAACGAAGGAGA+AGG 0.623160 tig0009218:+31282 Msa1346740:CDS
AAGGTGGAAGCTAACGGTGG+TGG 0.624235 tig0009218:+31441 Msa1346740:CDS
CCACCACCAGCAGGACCAGT+AGG 0.625255 tig0009218:-32338 None:intergenic
GTGGTGGTCACTACAATCCA+AGG 0.627985 tig0009218:+32255 Msa1346740:CDS
GCTGGTGGTGGTTACAACGC+CGG 0.630397 tig0009218:+32350 Msa1346740:CDS
AAGGCGACTGGGAAGCCGAA+GGG 0.636030 tig0009218:+32035 Msa1346740:CDS
AATCAACAACAAGAAGGTGG+CGG 0.642566 tig0009218:+31378 Msa1346740:CDS
GAAGATCAACCTCAAAACGA+AGG 0.642987 tig0009218:+31276 Msa1346740:CDS
TTCACCGTACTTCGAAAACG+TGG 0.643668 tig0009218:-31697 None:intergenic
GAAAATCAACAACAAGAAGG+TGG 0.646149 tig0009218:+31375 Msa1346740:CDS
CAATACCAGAATCCTCAGCT+GGG 0.650944 tig0009218:+32566 Msa1346740:CDS
CGGTGTCTGAGTATACTCAA+AGG 0.652912 tig0009218:+31910 Msa1346740:CDS
AGACCTCATCCTGGTCCCGG+TGG 0.660243 tig0009218:+32605 Msa1346740:CDS
CCACCACCTTGACCCAGCTG+AGG 0.661990 tig0009218:-32578 None:intergenic
CATTCGCATCATCACCATCA+CGG 0.665008 tig0009218:+32227 Msa1346740:CDS
GAAAAGAAGTATTCACATGG+TGG 0.667361 tig0009218:+32281 Msa1346740:CDS
ACCGTACTTCGAAAACGTGG+TGG 0.667699 tig0009218:-31694 None:intergenic
CGTGTCGGATCAGACTGTGA+AGG 0.668144 tig0009218:+31422 Msa1346740:CDS
ACTGTGAAGGTGGAAGCTAA+CGG 0.668213 tig0009218:+31435 Msa1346740:CDS
AATCCTCAGCTGGGTCAAGG+TGG 0.672405 tig0009218:+32575 Msa1346740:CDS
TTACCATACGCAGCAGCAGG+AGG 0.677100 tig0009218:-32503 None:intergenic
CTTCACAGTCTGATCCGACA+CGG 0.679646 tig0009218:-31421 None:intergenic
TGGTGATGATGCGAATGATG+CGG 0.691685 tig0009218:-32221 None:intergenic
GATGAAGAGGATGATCAACA+AGG 0.691927 tig0009218:+31336 Msa1346740:CDS
TGAGTATACTCAGACACCGG+TGG 0.708396 tig0009218:-31906 None:intergenic
AAAGAAAAGAAGTATTCACA+TGG 0.713599 tig0009218:+32278 Msa1346740:CDS
GCTTCTAGAACCATTCACGA+AGG 0.714086 tig0009218:+31527 Msa1346740:CDS
TCCTAAGGGTTACAACAAGG+GGG 0.727464 tig0009218:+32166 Msa1346740:CDS
CCTAAGGGTTACAACAAGGG+GGG 0.736362 tig0009218:+32167 Msa1346740:CDS
GGTGGTGGCCCATCACACGG+TGG 0.744986 tig0009218:+32302 Msa1346740:CDS
TCGCATCATCACCATCACGG+TGG 0.781979 tig0009218:+32230 Msa1346740:CDS
GTGAAGGTGGAAGCTAACGG+TGG 0.792915 tig0009218:+31438 Msa1346740:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! CTTTTATTTTGTTTAAGCAT+CGG + tig0009218:31775-31794 Msa1346740:CDS 20.0%
!!! CTTTTATTTTGTTTAAGCAT+CGG + tig0009218:31775-31794 Msa1346740:CDS 20.0%
!!! TTCTTGTTGTTGATTTTCTA+GGG - tig0009218:31373-31392 None:intergenic 25.0%
!!! AAAGAAAAGAAGTATTCACA+TGG + tig0009218:32278-32297 Msa1346740:CDS 25.0%
!!! TTCTTGTTGTTGATTTTCTA+GGG - tig0009218:31373-31392 None:intergenic 25.0%
!!! AAAGAAAAGAAGTATTCACA+TGG + tig0009218:32278-32297 Msa1346740:CDS 25.0%
ATTTCTTCTTCTTGTGTTGT+TGG - tig0009218:31243-31262 None:intergenic 30.0%
!!! CTTCTTGTTGTTGATTTTCT+AGG - tig0009218:31374-31393 None:intergenic 30.0%
CTAGAAAATCAACAACAAGA+AGG + tig0009218:31372-31391 Msa1346740:CDS 30.0%
AAAATCTTTGTTCATGGTCT+TGG + tig0009218:31645-31664 Msa1346740:CDS 30.0%
! AAGAATTCTGGAAAATCGAA+AGG + tig0009218:31747-31766 Msa1346740:CDS 30.0%
ACATACTTTGTATTGTCAGA+AGG + tig0009218:32133-32152 Msa1346740:CDS 30.0%
! GAATACTTCTTTTCTTTCCT+TGG - tig0009218:32275-32294 None:intergenic 30.0%
ATTTCTTCTTCTTGTGTTGT+TGG - tig0009218:31243-31262 None:intergenic 30.0%
!!! CTTCTTGTTGTTGATTTTCT+AGG - tig0009218:31374-31393 None:intergenic 30.0%
CTAGAAAATCAACAACAAGA+AGG + tig0009218:31372-31391 Msa1346740:CDS 30.0%
AAAATCTTTGTTCATGGTCT+TGG + tig0009218:31645-31664 Msa1346740:CDS 30.0%
! AAGAATTCTGGAAAATCGAA+AGG + tig0009218:31747-31766 Msa1346740:CDS 30.0%
ACATACTTTGTATTGTCAGA+AGG + tig0009218:32133-32152 Msa1346740:CDS 30.0%
! GAATACTTCTTTTCTTTCCT+TGG - tig0009218:32275-32294 None:intergenic 30.0%
!! TTGTGTTGTTGGTTCTTCTT+CGG - tig0009218:31232-31251 None:intergenic 35.0%
! TGAGGTTGATCTTCTTCAAT+CGG - tig0009218:31270-31289 None:intergenic 35.0%
GAAAATCAACAACAAGAAGG+TGG + tig0009218:31375-31394 Msa1346740:CDS 35.0%
CAATAACAACGAAGAACAAG+AGG + tig0009218:31470-31489 Msa1346740:CDS 35.0%
ACAAGAGGAAGATCTTGAAT+TGG + tig0009218:31485-31504 Msa1346740:CDS 35.0%
! GACCATGAACAAAGATTTTC+CGG - tig0009218:31644-31663 None:intergenic 35.0%
CGGTGAAATTGAAGATTGTA+AGG + tig0009218:31713-31732 Msa1346740:CDS 35.0%
!!! ATTTTGTTTAAGCATCGGAC+TGG + tig0009218:31780-31799 Msa1346740:CDS 35.0%
!!! TTTTGTTTAAGCATCGGACT+GGG + tig0009218:31781-31800 Msa1346740:CDS 35.0%
!!! CTTGAGTTTTTCAAGCAGTT+TGG + tig0009218:31981-32000 Msa1346740:CDS 35.0%
TGCGCTGTTTGTTTATAAGA+CGG + tig0009218:32061-32080 Msa1346740:CDS 35.0%
!! GAAAAGAAGTATTCACATGG+TGG + tig0009218:32281-32300 Msa1346740:CDS 35.0%
!! TTGTGTTGTTGGTTCTTCTT+CGG - tig0009218:31232-31251 None:intergenic 35.0%
! TGAGGTTGATCTTCTTCAAT+CGG - tig0009218:31270-31289 None:intergenic 35.0%
GAAAATCAACAACAAGAAGG+TGG + tig0009218:31375-31394 Msa1346740:CDS 35.0%
CAATAACAACGAAGAACAAG+AGG + tig0009218:31470-31489 Msa1346740:CDS 35.0%
ACAAGAGGAAGATCTTGAAT+TGG + tig0009218:31485-31504 Msa1346740:CDS 35.0%
! GACCATGAACAAAGATTTTC+CGG - tig0009218:31644-31663 None:intergenic 35.0%
CGGTGAAATTGAAGATTGTA+AGG + tig0009218:31713-31732 Msa1346740:CDS 35.0%
!!! ATTTTGTTTAAGCATCGGAC+TGG + tig0009218:31780-31799 Msa1346740:CDS 35.0%
!!! TTTTGTTTAAGCATCGGACT+GGG + tig0009218:31781-31800 Msa1346740:CDS 35.0%
!!! CTTGAGTTTTTCAAGCAGTT+TGG + tig0009218:31981-32000 Msa1346740:CDS 35.0%
TGCGCTGTTTGTTTATAAGA+CGG + tig0009218:32061-32080 Msa1346740:CDS 35.0%
!! GAAAAGAAGTATTCACATGG+TGG + tig0009218:32281-32300 Msa1346740:CDS 35.0%
AGATCGAAGCTTTCGTTTCT+TGG - tig0009218:31154-31173 None:intergenic 40.0%
TACTTCTTCTTGTTGGGGTT+CGG - tig0009218:31208-31227 None:intergenic 40.0%
TTCGGCTACTTCTTCTTGTT+GGG - tig0009218:31214-31233 None:intergenic 40.0%
! AGGTTGATCTTCTTCAATCG+GGG - tig0009218:31268-31287 None:intergenic 40.0%
! GAGGTTGATCTTCTTCAATC+GGG - tig0009218:31269-31288 None:intergenic 40.0%
GAAGATCAACCTCAAAACGA+AGG + tig0009218:31276-31295 Msa1346740:CDS 40.0%
GATGAAGAGGATGATCAACA+AGG + tig0009218:31336-31355 Msa1346740:CDS 40.0%
AATCAACAACAAGAAGGTGG+CGG + tig0009218:31378-31397 Msa1346740:CDS 40.0%
TGTAATTGCTCCTTCGTGAA+TGG - tig0009218:31540-31559 None:intergenic 40.0%
! AACAAAGATTTTCCGGTGAG+CGG - tig0009218:31637-31656 None:intergenic 40.0%
CACCGGAAAATCTTTGTTCA+TGG + tig0009218:31639-31658 Msa1346740:CDS 40.0%
! TCTTTGTTCATGGTCTTGGT+TGG + tig0009218:31649-31668 Msa1346740:CDS 40.0%
! CTTTGTTCATGGTCTTGGTT+GGG + tig0009218:31650-31669 Msa1346740:CDS 40.0%
GCTGTGACTGATAAGAATTC+TGG + tig0009218:31735-31754 Msa1346740:CDS 40.0%
CTATTCCCAATCACTTTCTG+CGG - tig0009218:31828-31847 None:intergenic 40.0%
TAGGACTACATCGTGTCAAT+TGG + tig0009218:31845-31864 Msa1346740:CDS 40.0%
! TACATCGTGTCAATTGGCTT+CGG + tig0009218:31851-31870 Msa1346740:CDS 40.0%
CTTTGAGTATACTCAGACAC+CGG - tig0009218:31912-31931 None:intergenic 40.0%
AAAAACTCAAGCAGCTTCTG+AGG - tig0009218:31972-31991 None:intergenic 40.0%
!!! GTTTTTCAAGCAGTTTGGAG+AGG + tig0009218:31986-32005 Msa1346740:CDS 40.0%
TATTGTCAGAAGGCTGTTGA+TGG + tig0009218:32143-32162 Msa1346740:CDS 40.0%
!! AAGAAGTATTCACATGGTGG+TGG + tig0009218:32284-32303 Msa1346740:CDS 40.0%
! TCTGCTTTGCTTGCTAATCA+AGG + tig0009218:32416-32435 Msa1346740:CDS 40.0%
TATGGTAATCAGGCTGCTAT+GGG + tig0009218:32518-32537 Msa1346740:CDS 40.0%
AGATCGAAGCTTTCGTTTCT+TGG - tig0009218:31154-31173 None:intergenic 40.0%
TACTTCTTCTTGTTGGGGTT+CGG - tig0009218:31208-31227 None:intergenic 40.0%
TTCGGCTACTTCTTCTTGTT+GGG - tig0009218:31214-31233 None:intergenic 40.0%
! AGGTTGATCTTCTTCAATCG+GGG - tig0009218:31268-31287 None:intergenic 40.0%
! GAGGTTGATCTTCTTCAATC+GGG - tig0009218:31269-31288 None:intergenic 40.0%
GAAGATCAACCTCAAAACGA+AGG + tig0009218:31276-31295 Msa1346740:CDS 40.0%
GATGAAGAGGATGATCAACA+AGG + tig0009218:31336-31355 Msa1346740:CDS 40.0%
AATCAACAACAAGAAGGTGG+CGG + tig0009218:31378-31397 Msa1346740:CDS 40.0%
TGTAATTGCTCCTTCGTGAA+TGG - tig0009218:31540-31559 None:intergenic 40.0%
! AACAAAGATTTTCCGGTGAG+CGG - tig0009218:31637-31656 None:intergenic 40.0%
CACCGGAAAATCTTTGTTCA+TGG + tig0009218:31639-31658 Msa1346740:CDS 40.0%
! TCTTTGTTCATGGTCTTGGT+TGG + tig0009218:31649-31668 Msa1346740:CDS 40.0%
! CTTTGTTCATGGTCTTGGTT+GGG + tig0009218:31650-31669 Msa1346740:CDS 40.0%
GCTGTGACTGATAAGAATTC+TGG + tig0009218:31735-31754 Msa1346740:CDS 40.0%
CTATTCCCAATCACTTTCTG+CGG - tig0009218:31828-31847 None:intergenic 40.0%
TAGGACTACATCGTGTCAAT+TGG + tig0009218:31845-31864 Msa1346740:CDS 40.0%
! TACATCGTGTCAATTGGCTT+CGG + tig0009218:31851-31870 Msa1346740:CDS 40.0%
CTTTGAGTATACTCAGACAC+CGG - tig0009218:31912-31931 None:intergenic 40.0%
AAAAACTCAAGCAGCTTCTG+AGG - tig0009218:31972-31991 None:intergenic 40.0%
!!! GTTTTTCAAGCAGTTTGGAG+AGG + tig0009218:31986-32005 Msa1346740:CDS 40.0%
TATTGTCAGAAGGCTGTTGA+TGG + tig0009218:32143-32162 Msa1346740:CDS 40.0%
!! AAGAAGTATTCACATGGTGG+TGG + tig0009218:32284-32303 Msa1346740:CDS 40.0%
! TCTGCTTTGCTTGCTAATCA+AGG + tig0009218:32416-32435 Msa1346740:CDS 40.0%
TATGGTAATCAGGCTGCTAT+GGG + tig0009218:32518-32537 Msa1346740:CDS 40.0%
ACTTCTTCTTGTTGGGGTTC+GGG - tig0009218:31207-31226 None:intergenic 45.0%
TCGGCTACTTCTTCTTGTTG+GGG - tig0009218:31213-31232 None:intergenic 45.0%
CTTCGGCTACTTCTTCTTGT+TGG - tig0009218:31215-31234 None:intergenic 45.0%
CAACCTCAAAACGAAGGAGA+AGG + tig0009218:31282-31301 Msa1346740:CDS 45.0%
! TCACCTTCTCCTTCGTTTTG+AGG - tig0009218:31288-31307 None:intergenic 45.0%
AGGTGAAGAAGAGCAAGAAG+AGG + tig0009218:31302-31321 Msa1346740:CDS 45.0%
TGAAGAAGAGCAAGAAGAGG+AGG + tig0009218:31305-31324 Msa1346740:CDS 45.0%
ACTGTGAAGGTGGAAGCTAA+CGG + tig0009218:31435-31454 Msa1346740:CDS 45.0%
!! GGTTCTAGAAGCTTCTCAAC+AGG - tig0009218:31519-31538 None:intergenic 45.0%
!! GCTTCTAGAACCATTCACGA+AGG + tig0009218:31527-31546 Msa1346740:CDS 45.0%
CGAACATTCTCAGACAGATC+TGG - tig0009218:31594-31613 None:intergenic 45.0%
! ACAAAGATTTTCCGGTGAGC+GGG - tig0009218:31636-31655 None:intergenic 45.0%
! ACCACCACGTTTTCGAAGTA+CGG + tig0009218:31693-31712 Msa1346740:CDS 45.0%
TTCACCGTACTTCGAAAACG+TGG - tig0009218:31700-31719 None:intergenic 45.0%
CGCAGAAAGTGATTGGGAAT+AGG + tig0009218:31826-31845 Msa1346740:CDS 45.0%
CGGTGTCTGAGTATACTCAA+AGG + tig0009218:31910-31929 Msa1346740:CDS 45.0%
TTTCAAGCAGTTTGGAGAGG+TGG + tig0009218:31989-32008 Msa1346740:CDS 45.0%
ACAAACAGCGCAAAACCCTT+CGG - tig0009218:32053-32072 None:intergenic 45.0%
TGTCCCTCGAACACCTTATT+CGG - tig0009218:32116-32135 None:intergenic 45.0%
!! AAGGCTGTTGATGGTCCTAA+GGG + tig0009218:32152-32171 Msa1346740:CDS 45.0%
TGGTCCTAAGGGTTACAACA+AGG + tig0009218:32163-32182 Msa1346740:CDS 45.0%
GGTCCTAAGGGTTACAACAA+GGG + tig0009218:32164-32183 Msa1346740:CDS 45.0%
GTCCTAAGGGTTACAACAAG+GGG + tig0009218:32165-32184 Msa1346740:CDS 45.0%
TCCTAAGGGTTACAACAAGG+GGG + tig0009218:32166-32185 Msa1346740:CDS 45.0%
! TGGTGATGATGCGAATGATG+CGG - tig0009218:32224-32243 None:intergenic 45.0%
CATTCGCATCATCACCATCA+CGG + tig0009218:32227-32246 Msa1346740:CDS 45.0%
!! AAGTATTCACATGGTGGTGG+TGG + tig0009218:32287-32306 Msa1346740:CDS 45.0%
! TTGCTTGCTAATCAAGGAGC+TGG + tig0009218:32422-32441 Msa1346740:CDS 45.0%
TGCTAATCAAGGAGCTGGAT+TGG + tig0009218:32427-32446 Msa1346740:CDS 45.0%
GCTAATCAAGGAGCTGGATT+GGG + tig0009218:32428-32447 Msa1346740:CDS 45.0%
! TTGGGACTTGGGAATTTGCT+TGG + tig0009218:32446-32465 Msa1346740:CDS 45.0%
! AATTTGCTTGGAGGTCTTGG+TGG + tig0009218:32458-32477 Msa1346740:CDS 45.0%
GTATGGTAATCAGGCTGCTA+TGG + tig0009218:32517-32536 Msa1346740:CDS 45.0%
AATCAGGCTGCTATGGGATA+TGG + tig0009218:32524-32543 Msa1346740:CDS 45.0%
AGCTGAGGATTCTGGTATTG+TGG - tig0009218:32566-32585 None:intergenic 45.0%
ACAATACCAGAATCCTCAGC+TGG + tig0009218:32565-32584 Msa1346740:CDS 45.0%
CAATACCAGAATCCTCAGCT+GGG + tig0009218:32566-32585 Msa1346740:CDS 45.0%
ACTTCTTCTTGTTGGGGTTC+GGG - tig0009218:31207-31226 None:intergenic 45.0%
TCGGCTACTTCTTCTTGTTG+GGG - tig0009218:31213-31232 None:intergenic 45.0%
CTTCGGCTACTTCTTCTTGT+TGG - tig0009218:31215-31234 None:intergenic 45.0%
CAACCTCAAAACGAAGGAGA+AGG + tig0009218:31282-31301 Msa1346740:CDS 45.0%
! TCACCTTCTCCTTCGTTTTG+AGG - tig0009218:31288-31307 None:intergenic 45.0%
AGGTGAAGAAGAGCAAGAAG+AGG + tig0009218:31302-31321 Msa1346740:CDS 45.0%
TGAAGAAGAGCAAGAAGAGG+AGG + tig0009218:31305-31324 Msa1346740:CDS 45.0%
ACTGTGAAGGTGGAAGCTAA+CGG + tig0009218:31435-31454 Msa1346740:CDS 45.0%
!! GGTTCTAGAAGCTTCTCAAC+AGG - tig0009218:31519-31538 None:intergenic 45.0%
!! GCTTCTAGAACCATTCACGA+AGG + tig0009218:31527-31546 Msa1346740:CDS 45.0%
CGAACATTCTCAGACAGATC+TGG - tig0009218:31594-31613 None:intergenic 45.0%
! ACAAAGATTTTCCGGTGAGC+GGG - tig0009218:31636-31655 None:intergenic 45.0%
! ACCACCACGTTTTCGAAGTA+CGG + tig0009218:31693-31712 Msa1346740:CDS 45.0%
TTCACCGTACTTCGAAAACG+TGG - tig0009218:31700-31719 None:intergenic 45.0%
CGCAGAAAGTGATTGGGAAT+AGG + tig0009218:31826-31845 Msa1346740:CDS 45.0%
CGGTGTCTGAGTATACTCAA+AGG + tig0009218:31910-31929 Msa1346740:CDS 45.0%
TTTCAAGCAGTTTGGAGAGG+TGG + tig0009218:31989-32008 Msa1346740:CDS 45.0%
ACAAACAGCGCAAAACCCTT+CGG - tig0009218:32053-32072 None:intergenic 45.0%
TGTCCCTCGAACACCTTATT+CGG - tig0009218:32116-32135 None:intergenic 45.0%
!! AAGGCTGTTGATGGTCCTAA+GGG + tig0009218:32152-32171 Msa1346740:CDS 45.0%
TGGTCCTAAGGGTTACAACA+AGG + tig0009218:32163-32182 Msa1346740:CDS 45.0%
GGTCCTAAGGGTTACAACAA+GGG + tig0009218:32164-32183 Msa1346740:CDS 45.0%
GTCCTAAGGGTTACAACAAG+GGG + tig0009218:32165-32184 Msa1346740:CDS 45.0%
TCCTAAGGGTTACAACAAGG+GGG + tig0009218:32166-32185 Msa1346740:CDS 45.0%
! TGGTGATGATGCGAATGATG+CGG - tig0009218:32224-32243 None:intergenic 45.0%
CATTCGCATCATCACCATCA+CGG + tig0009218:32227-32246 Msa1346740:CDS 45.0%
!! AAGTATTCACATGGTGGTGG+TGG + tig0009218:32287-32306 Msa1346740:CDS 45.0%
! TTGCTTGCTAATCAAGGAGC+TGG + tig0009218:32422-32441 Msa1346740:CDS 45.0%
TGCTAATCAAGGAGCTGGAT+TGG + tig0009218:32427-32446 Msa1346740:CDS 45.0%
GCTAATCAAGGAGCTGGATT+GGG + tig0009218:32428-32447 Msa1346740:CDS 45.0%
! TTGGGACTTGGGAATTTGCT+TGG + tig0009218:32446-32465 Msa1346740:CDS 45.0%
! AATTTGCTTGGAGGTCTTGG+TGG + tig0009218:32458-32477 Msa1346740:CDS 45.0%
GTATGGTAATCAGGCTGCTA+TGG + tig0009218:32517-32536 Msa1346740:CDS 45.0%
AATCAGGCTGCTATGGGATA+TGG + tig0009218:32524-32543 Msa1346740:CDS 45.0%
AGCTGAGGATTCTGGTATTG+TGG - tig0009218:32566-32585 None:intergenic 45.0%
ACAATACCAGAATCCTCAGC+TGG + tig0009218:32565-32584 Msa1346740:CDS 45.0%
CAATACCAGAATCCTCAGCT+GGG + tig0009218:32566-32585 Msa1346740:CDS 45.0%
! TTCTTGTTGGGGTTCGGGTT+CGG - tig0009218:31202-31221 None:intergenic 50.0%
GGAGGTTGCAGAAGATGAAG+AGG + tig0009218:31323-31342 Msa1346740:CDS 50.0%
TTCAAACAACGCTGCCGTGT+CGG + tig0009218:31407-31426 Msa1346740:CDS 50.0%
CTTCACAGTCTGATCCGACA+CGG - tig0009218:31424-31443 None:intergenic 50.0%
ACACGTGCTTGTGAAGCAAG+CGG + tig0009218:31557-31576 Msa1346740:CDS 50.0%
GTCTGAGAATGTTCGTCAGC+TGG + tig0009218:31599-31618 Msa1346740:CDS 50.0%
! CAAAGATTTTCCGGTGAGCG+GGG - tig0009218:31635-31654 None:intergenic 50.0%
ACCGTACTTCGAAAACGTGG+TGG - tig0009218:31697-31716 None:intergenic 50.0%
AAGCAGCCGCAGAAAGTGAT+TGG + tig0009218:31819-31838 Msa1346740:CDS 50.0%
AGCAGCCGCAGAAAGTGATT+GGG + tig0009218:31820-31839 Msa1346740:CDS 50.0%
TGAGTATACTCAGACACCGG+TGG - tig0009218:31909-31928 None:intergenic 50.0%
CAGTTTGGAGAGGTGGATGA+TGG + tig0009218:31996-32015 Msa1346740:CDS 50.0%
! AGAGGTGGATGATGGTCCAT+TGG + tig0009218:32004-32023 Msa1346740:CDS 50.0%
! GAGGTGGATGATGGTCCATT+GGG + tig0009218:32005-32024 Msa1346740:CDS 50.0%
! AGGTGGATGATGGTCCATTG+GGG + tig0009218:32006-32025 Msa1346740:CDS 50.0%
TGGTCCATTGGGGTTGGATA+AGG + tig0009218:32016-32035 Msa1346740:CDS 50.0%
!! GACGGTTGAGAGTGCTAAGA+AGG + tig0009218:32079-32098 Msa1346740:CDS 50.0%
!! TGAGAGTGCTAAGAAGGCGT+TGG + tig0009218:32085-32104 Msa1346740:CDS 50.0%
! AGAGCCGAATAAGGTGTTCG+AGG + tig0009218:32109-32128 Msa1346740:CDS 50.0%
! GAGCCGAATAAGGTGTTCGA+GGG + tig0009218:32110-32129 Msa1346740:CDS 50.0%
!! GAAGGCTGTTGATGGTCCTA+AGG + tig0009218:32151-32170 Msa1346740:CDS 50.0%
CCTAAGGGTTACAACAAGGG+GGG + tig0009218:32167-32186 Msa1346740:CDS 50.0%
GTGGTGGTCACTACAATCCA+AGG + tig0009218:32255-32274 Msa1346740:CDS 50.0%
TCAAGTGACCACCGTGTGAT+GGG - tig0009218:32313-32332 None:intergenic 50.0%
ATCAAGTGACCACCGTGTGA+TGG - tig0009218:32314-32333 None:intergenic 50.0%
ATCACACGGTGGTCACTTGA+TGG + tig0009218:32313-32332 Msa1346740:CDS 50.0%
ATTGAATCCGGCTCTTGGAC+AGG + tig0009218:32388-32407 Msa1346740:CDS 50.0%
! AAGGAGCTGGATTGGGACTT+GGG + tig0009218:32435-32454 Msa1346740:CDS 50.0%
! GGACTTGGGAATTTGCTTGG+AGG + tig0009218:32449-32468 Msa1346740:CDS 50.0%
! GGGAATTTGCTTGGAGGTCT+TGG + tig0009218:32455-32474 Msa1346740:CDS 50.0%
TGATTACCATACGCAGCAGC+AGG - tig0009218:32509-32528 None:intergenic 50.0%
TGCTGCTGCGTATGGTAATC+AGG + tig0009218:32508-32527 Msa1346740:CDS 50.0%
! TTCTTGTTGGGGTTCGGGTT+CGG - tig0009218:31202-31221 None:intergenic 50.0%
GGAGGTTGCAGAAGATGAAG+AGG + tig0009218:31323-31342 Msa1346740:CDS 50.0%
TTCAAACAACGCTGCCGTGT+CGG + tig0009218:31407-31426 Msa1346740:CDS 50.0%
CTTCACAGTCTGATCCGACA+CGG - tig0009218:31424-31443 None:intergenic 50.0%
ACACGTGCTTGTGAAGCAAG+CGG + tig0009218:31557-31576 Msa1346740:CDS 50.0%
GTCTGAGAATGTTCGTCAGC+TGG + tig0009218:31599-31618 Msa1346740:CDS 50.0%
! CAAAGATTTTCCGGTGAGCG+GGG - tig0009218:31635-31654 None:intergenic 50.0%
ACCGTACTTCGAAAACGTGG+TGG - tig0009218:31697-31716 None:intergenic 50.0%
AAGCAGCCGCAGAAAGTGAT+TGG + tig0009218:31819-31838 Msa1346740:CDS 50.0%
AGCAGCCGCAGAAAGTGATT+GGG + tig0009218:31820-31839 Msa1346740:CDS 50.0%
TGAGTATACTCAGACACCGG+TGG - tig0009218:31909-31928 None:intergenic 50.0%
CAGTTTGGAGAGGTGGATGA+TGG + tig0009218:31996-32015 Msa1346740:CDS 50.0%
! AGAGGTGGATGATGGTCCAT+TGG + tig0009218:32004-32023 Msa1346740:CDS 50.0%
! GAGGTGGATGATGGTCCATT+GGG + tig0009218:32005-32024 Msa1346740:CDS 50.0%
! AGGTGGATGATGGTCCATTG+GGG + tig0009218:32006-32025 Msa1346740:CDS 50.0%
TGGTCCATTGGGGTTGGATA+AGG + tig0009218:32016-32035 Msa1346740:CDS 50.0%
!! GACGGTTGAGAGTGCTAAGA+AGG + tig0009218:32079-32098 Msa1346740:CDS 50.0%
!! TGAGAGTGCTAAGAAGGCGT+TGG + tig0009218:32085-32104 Msa1346740:CDS 50.0%
! AGAGCCGAATAAGGTGTTCG+AGG + tig0009218:32109-32128 Msa1346740:CDS 50.0%
! GAGCCGAATAAGGTGTTCGA+GGG + tig0009218:32110-32129 Msa1346740:CDS 50.0%
!! GAAGGCTGTTGATGGTCCTA+AGG + tig0009218:32151-32170 Msa1346740:CDS 50.0%
CCTAAGGGTTACAACAAGGG+GGG + tig0009218:32167-32186 Msa1346740:CDS 50.0%
GTGGTGGTCACTACAATCCA+AGG + tig0009218:32255-32274 Msa1346740:CDS 50.0%
TCAAGTGACCACCGTGTGAT+GGG - tig0009218:32313-32332 None:intergenic 50.0%
ATCAAGTGACCACCGTGTGA+TGG - tig0009218:32314-32333 None:intergenic 50.0%
ATCACACGGTGGTCACTTGA+TGG + tig0009218:32313-32332 Msa1346740:CDS 50.0%
ATTGAATCCGGCTCTTGGAC+AGG + tig0009218:32388-32407 Msa1346740:CDS 50.0%
! AAGGAGCTGGATTGGGACTT+GGG + tig0009218:32435-32454 Msa1346740:CDS 50.0%
! GGACTTGGGAATTTGCTTGG+AGG + tig0009218:32449-32468 Msa1346740:CDS 50.0%
! GGGAATTTGCTTGGAGGTCT+TGG + tig0009218:32455-32474 Msa1346740:CDS 50.0%
TGATTACCATACGCAGCAGC+AGG - tig0009218:32509-32528 None:intergenic 50.0%
TGCTGCTGCGTATGGTAATC+AGG + tig0009218:32508-32527 Msa1346740:CDS 50.0%
!! CGGCTTGTTTGGTGGGTTCA+GGG - tig0009218:31182-31201 None:intergenic 55.0%
!! TCGGCTTGTTTGGTGGGTTC+AGG - tig0009218:31183-31202 None:intergenic 55.0%
! TCGGGTTCGGCTTGTTTGGT+GGG - tig0009218:31189-31208 None:intergenic 55.0%
! TTCGGGTTCGGCTTGTTTGG+TGG - tig0009218:31190-31209 None:intergenic 55.0%
CGTGTCGGATCAGACTGTGA+AGG + tig0009218:31422-31441 Msa1346740:CDS 55.0%
GTCGGATCAGACTGTGAAGG+TGG + tig0009218:31425-31444 Msa1346740:CDS 55.0%
GTGAAGGTGGAAGCTAACGG+TGG + tig0009218:31438-31457 Msa1346740:CDS 55.0%
AAGGTGGAAGCTAACGGTGG+TGG + tig0009218:31441-31460 Msa1346740:CDS 55.0%
TGTTCGTCAGCTGGCTGATG+TGG + tig0009218:31608-31627 Msa1346740:CDS 55.0%
! TCGTGTCAATTGGCTTCGGC+TGG + tig0009218:31855-31874 Msa1346740:CDS 55.0%
! GGATGATGGTCCATTGGGGT+TGG + tig0009218:32010-32029 Msa1346740:CDS 55.0%
GTCGCCTTATCCAACCCCAA+TGG - tig0009218:32023-32042 None:intergenic 55.0%
TTGGGGTTGGATAAGGCGAC+TGG + tig0009218:32023-32042 Msa1346740:CDS 55.0%
TGGGGTTGGATAAGGCGACT+GGG + tig0009218:32024-32043 Msa1346740:CDS 55.0%
! GGCGTTGGAAGAGCCGAATA+AGG + tig0009218:32100-32119 Msa1346740:CDS 55.0%
! CCCCCCTTGTTGTAACCCTT+AGG - tig0009218:32170-32189 None:intergenic 55.0%
TCGCATCATCACCATCACGG+TGG + tig0009218:32230-32249 Msa1346740:CDS 55.0%
CATCATCACCATCACGGTGG+TGG + tig0009218:32233-32252 Msa1346740:CDS 55.0%
! GGTCACTTGATGGCTCCTAC+TGG + tig0009218:32323-32342 Msa1346740:CDS 55.0%
CAGGGATTGAATCCGGCTCT+TGG + tig0009218:32383-32402 Msa1346740:CDS 55.0%
GACAAAGCCTGTCCAAGAGC+CGG - tig0009218:32398-32417 None:intergenic 55.0%
! CAAGGAGCTGGATTGGGACT+TGG + tig0009218:32434-32453 Msa1346740:CDS 55.0%
GGAGGACCAGCTTGATTCAC+CGG - tig0009218:32488-32507 None:intergenic 55.0%
TTACCATACGCAGCAGCAGG+AGG - tig0009218:32506-32525 None:intergenic 55.0%
CTATGGGATATGGCCAGCCT+GGG + tig0009218:32534-32553 Msa1346740:CDS 55.0%
TGGTATTGTGGCTGCAACCC+AGG - tig0009218:32554-32573 None:intergenic 55.0%
CTTGACCCAGCTGAGGATTC+TGG - tig0009218:32574-32593 None:intergenic 55.0%
CAGAATCCTCAGCTGGGTCA+AGG + tig0009218:32572-32591 Msa1346740:CDS 55.0%
AATCCTCAGCTGGGTCAAGG+TGG + tig0009218:32575-32594 Msa1346740:CDS 55.0%
! GGTGGTGTTAGACCTCATCC+TGG + tig0009218:32596-32615 Msa1346740:CDS 55.0%
GTTAGACCTCATCCTGGTCC+CGG + tig0009218:32602-32621 Msa1346740:CDS 55.0%
!! CGGCTTGTTTGGTGGGTTCA+GGG - tig0009218:31182-31201 None:intergenic 55.0%
!! TCGGCTTGTTTGGTGGGTTC+AGG - tig0009218:31183-31202 None:intergenic 55.0%
! TCGGGTTCGGCTTGTTTGGT+GGG - tig0009218:31189-31208 None:intergenic 55.0%
! TTCGGGTTCGGCTTGTTTGG+TGG - tig0009218:31190-31209 None:intergenic 55.0%
CGTGTCGGATCAGACTGTGA+AGG + tig0009218:31422-31441 Msa1346740:CDS 55.0%
GTCGGATCAGACTGTGAAGG+TGG + tig0009218:31425-31444 Msa1346740:CDS 55.0%
GTGAAGGTGGAAGCTAACGG+TGG + tig0009218:31438-31457 Msa1346740:CDS 55.0%
AAGGTGGAAGCTAACGGTGG+TGG + tig0009218:31441-31460 Msa1346740:CDS 55.0%
TGTTCGTCAGCTGGCTGATG+TGG + tig0009218:31608-31627 Msa1346740:CDS 55.0%
! TCGTGTCAATTGGCTTCGGC+TGG + tig0009218:31855-31874 Msa1346740:CDS 55.0%
! GGATGATGGTCCATTGGGGT+TGG + tig0009218:32010-32029 Msa1346740:CDS 55.0%
GTCGCCTTATCCAACCCCAA+TGG - tig0009218:32023-32042 None:intergenic 55.0%
TTGGGGTTGGATAAGGCGAC+TGG + tig0009218:32023-32042 Msa1346740:CDS 55.0%
TGGGGTTGGATAAGGCGACT+GGG + tig0009218:32024-32043 Msa1346740:CDS 55.0%
! GGCGTTGGAAGAGCCGAATA+AGG + tig0009218:32100-32119 Msa1346740:CDS 55.0%
! CCCCCCTTGTTGTAACCCTT+AGG - tig0009218:32170-32189 None:intergenic 55.0%
TCGCATCATCACCATCACGG+TGG + tig0009218:32230-32249 Msa1346740:CDS 55.0%
CATCATCACCATCACGGTGG+TGG + tig0009218:32233-32252 Msa1346740:CDS 55.0%
! GGTCACTTGATGGCTCCTAC+TGG + tig0009218:32323-32342 Msa1346740:CDS 55.0%
CAGGGATTGAATCCGGCTCT+TGG + tig0009218:32383-32402 Msa1346740:CDS 55.0%
GACAAAGCCTGTCCAAGAGC+CGG - tig0009218:32398-32417 None:intergenic 55.0%
! CAAGGAGCTGGATTGGGACT+TGG + tig0009218:32434-32453 Msa1346740:CDS 55.0%
GGAGGACCAGCTTGATTCAC+CGG - tig0009218:32488-32507 None:intergenic 55.0%
TTACCATACGCAGCAGCAGG+AGG - tig0009218:32506-32525 None:intergenic 55.0%
CTATGGGATATGGCCAGCCT+GGG + tig0009218:32534-32553 Msa1346740:CDS 55.0%
TGGTATTGTGGCTGCAACCC+AGG - tig0009218:32554-32573 None:intergenic 55.0%
CTTGACCCAGCTGAGGATTC+TGG - tig0009218:32574-32593 None:intergenic 55.0%
CAGAATCCTCAGCTGGGTCA+AGG + tig0009218:32572-32591 Msa1346740:CDS 55.0%
AATCCTCAGCTGGGTCAAGG+TGG + tig0009218:32575-32594 Msa1346740:CDS 55.0%
! GGTGGTGTTAGACCTCATCC+TGG + tig0009218:32596-32615 Msa1346740:CDS 55.0%
GTTAGACCTCATCCTGGTCC+CGG + tig0009218:32602-32621 Msa1346740:CDS 55.0%
! GGGTTCGGGTTCGGCTTGTT+TGG - tig0009218:31193-31212 None:intergenic 60.0%
! AGCATCGGACTGGGTGTCGT+CGG + tig0009218:31790-31809 Msa1346740:CDS 60.0%
TCAGACACCGGTGGCGCATT+CGG - tig0009218:31900-31919 None:intergenic 60.0%
TAAGGCGACTGGGAAGCCGA+AGG + tig0009218:32034-32053 Msa1346740:CDS 60.0%
AAGGCGACTGGGAAGCCGAA+GGG + tig0009218:32035-32054 Msa1346740:CDS 60.0%
! CATCACCATCACGGTGGTGG+TGG + tig0009218:32236-32255 Msa1346740:CDS 60.0%
ATGGCTCCTACTGGTCCTGC+TGG + tig0009218:32332-32351 Msa1346740:CDS 60.0%
GCGTTGTAACCACCACCAGC+AGG - tig0009218:32350-32369 None:intergenic 60.0%
!! GCTGGTGGTGGTTACAACGC+CGG + tig0009218:32350-32369 Msa1346740:CDS 60.0%
TGGTTACAACGCCGGTGTGC+CGG + tig0009218:32358-32377 Msa1346740:CDS 60.0%
! GCCGGCTCAGGGATTGAATC+CGG + tig0009218:32376-32395 Msa1346740:CDS 60.0%
GCCGGATTCAATCCCTGAGC+CGG - tig0009218:32380-32399 None:intergenic 60.0%
GCTATGGGATATGGCCAGCC+TGG + tig0009218:32533-32552 Msa1346740:CDS 60.0%
ATTGTGGCTGCAACCCAGGC+TGG - tig0009218:32550-32569 None:intergenic 60.0%
!! ACCCATGTAAGGAGCGCCAC+CGG - tig0009218:32624-32643 None:intergenic 60.0%
! GGGTTCGGGTTCGGCTTGTT+TGG - tig0009218:31193-31212 None:intergenic 60.0%
! AGCATCGGACTGGGTGTCGT+CGG + tig0009218:31790-31809 Msa1346740:CDS 60.0%
TCAGACACCGGTGGCGCATT+CGG - tig0009218:31900-31919 None:intergenic 60.0%
TAAGGCGACTGGGAAGCCGA+AGG + tig0009218:32034-32053 Msa1346740:CDS 60.0%
AAGGCGACTGGGAAGCCGAA+GGG + tig0009218:32035-32054 Msa1346740:CDS 60.0%
! CATCACCATCACGGTGGTGG+TGG + tig0009218:32236-32255 Msa1346740:CDS 60.0%
ATGGCTCCTACTGGTCCTGC+TGG + tig0009218:32332-32351 Msa1346740:CDS 60.0%
GCGTTGTAACCACCACCAGC+AGG - tig0009218:32350-32369 None:intergenic 60.0%
!! GCTGGTGGTGGTTACAACGC+CGG + tig0009218:32350-32369 Msa1346740:CDS 60.0%
TGGTTACAACGCCGGTGTGC+CGG + tig0009218:32358-32377 Msa1346740:CDS 60.0%
! GCCGGCTCAGGGATTGAATC+CGG + tig0009218:32376-32395 Msa1346740:CDS 60.0%
GCCGGATTCAATCCCTGAGC+CGG - tig0009218:32380-32399 None:intergenic 60.0%
GCTATGGGATATGGCCAGCC+TGG + tig0009218:32533-32552 Msa1346740:CDS 60.0%
ATTGTGGCTGCAACCCAGGC+TGG - tig0009218:32550-32569 None:intergenic 60.0%
!! ACCCATGTAAGGAGCGCCAC+CGG - tig0009218:32624-32643 None:intergenic 60.0%
CTGATGTGGACCCCGCTCAC+CGG + tig0009218:31622-31641 Msa1346740:CDS 65.0%
! GCATCGGACTGGGTGTCGTC+GGG + tig0009218:31791-31810 Msa1346740:CDS 65.0%
GGCTTCGGCTGGACCTGTTC+CGG + tig0009218:31866-31885 Msa1346740:CDS 65.0%
TTCGGTGGAGGAGCCGGAAC+AGG - tig0009218:31882-31901 None:intergenic 65.0%
TCCTCCACCGAATGCGCCAC+CGG + tig0009218:31890-31909 Msa1346740:CDS 65.0%
!! CACCATCACGGTGGTGGTGG+TGG + tig0009218:32239-32258 Msa1346740:CDS 65.0%
GACCACCACCACCACCGTGA+TGG - tig0009218:32244-32263 None:intergenic 65.0%
!! GGTGGTGGTGGCCCATCACA+CGG + tig0009218:32299-32318 Msa1346740:CDS 65.0%
GCTCCTACTGGTCCTGCTGG+TGG + tig0009218:32335-32354 Msa1346740:CDS 65.0%
CCACCACCAGCAGGACCAGT+AGG - tig0009218:32341-32360 None:intergenic 65.0%
CCTACTGGTCCTGCTGGTGG+TGG + tig0009218:32338-32357 Msa1346740:CDS 65.0%
CAATCCCTGAGCCGGCACAC+CGG - tig0009218:32372-32391 None:intergenic 65.0%
!! TGGAGGTCTTGGTGGTGCGC+CGG + tig0009218:32466-32485 Msa1346740:CDS 65.0%
! GGTGCGCCGGTGAATCAAGC+TGG + tig0009218:32479-32498 Msa1346740:CDS 65.0%
GGTCCTCCTGCTGCTGCGTA+TGG + tig0009218:32500-32519 Msa1346740:CDS 65.0%
CCACCACCTTGACCCAGCTG+AGG - tig0009218:32581-32600 None:intergenic 65.0%
CCTCAGCTGGGTCAAGGTGG+TGG + tig0009218:32578-32597 Msa1346740:CDS 65.0%
AGACCTCATCCTGGTCCCGG+TGG + tig0009218:32605-32624 Msa1346740:CDS 65.0%
TCCCGGTGGCGCTCCTTACA+TGG + tig0009218:32619-32638 Msa1346740:CDS 65.0%
!! CCCATGTAAGGAGCGCCACC+GGG - tig0009218:32623-32642 None:intergenic 65.0%
CCCGGTGGCGCTCCTTACAT+GGG + tig0009218:32620-32639 Msa1346740:CDS 65.0%
CTGATGTGGACCCCGCTCAC+CGG + tig0009218:31622-31641 Msa1346740:CDS 65.0%
! GCATCGGACTGGGTGTCGTC+GGG + tig0009218:31791-31810 Msa1346740:CDS 65.0%
GGCTTCGGCTGGACCTGTTC+CGG + tig0009218:31866-31885 Msa1346740:CDS 65.0%
TTCGGTGGAGGAGCCGGAAC+AGG - tig0009218:31882-31901 None:intergenic 65.0%
TCCTCCACCGAATGCGCCAC+CGG + tig0009218:31890-31909 Msa1346740:CDS 65.0%
!! CACCATCACGGTGGTGGTGG+TGG + tig0009218:32239-32258 Msa1346740:CDS 65.0%
GACCACCACCACCACCGTGA+TGG - tig0009218:32244-32263 None:intergenic 65.0%
!! GGTGGTGGTGGCCCATCACA+CGG + tig0009218:32299-32318 Msa1346740:CDS 65.0%
GCTCCTACTGGTCCTGCTGG+TGG + tig0009218:32335-32354 Msa1346740:CDS 65.0%
CCACCACCAGCAGGACCAGT+AGG - tig0009218:32341-32360 None:intergenic 65.0%
CCTACTGGTCCTGCTGGTGG+TGG + tig0009218:32338-32357 Msa1346740:CDS 65.0%
CAATCCCTGAGCCGGCACAC+CGG - tig0009218:32372-32391 None:intergenic 65.0%
!! TGGAGGTCTTGGTGGTGCGC+CGG + tig0009218:32466-32485 Msa1346740:CDS 65.0%
! GGTGCGCCGGTGAATCAAGC+TGG + tig0009218:32479-32498 Msa1346740:CDS 65.0%
GGTCCTCCTGCTGCTGCGTA+TGG + tig0009218:32500-32519 Msa1346740:CDS 65.0%
CCACCACCTTGACCCAGCTG+AGG - tig0009218:32581-32600 None:intergenic 65.0%
CCTCAGCTGGGTCAAGGTGG+TGG + tig0009218:32578-32597 Msa1346740:CDS 65.0%
AGACCTCATCCTGGTCCCGG+TGG + tig0009218:32605-32624 Msa1346740:CDS 65.0%
TCCCGGTGGCGCTCCTTACA+TGG + tig0009218:32619-32638 Msa1346740:CDS 65.0%
!! CCCATGTAAGGAGCGCCACC+GGG - tig0009218:32623-32642 None:intergenic 65.0%
CCCGGTGGCGCTCCTTACAT+GGG + tig0009218:32620-32639 Msa1346740:CDS 65.0%
! GGCGCATTCGGTGGAGGAGC+CGG - tig0009218:31888-31907 None:intergenic 70.0%
! ACCGGTGGCGCATTCGGTGG+AGG - tig0009218:31894-31913 None:intergenic 70.0%
GACACCGGTGGCGCATTCGG+TGG - tig0009218:31897-31916 None:intergenic 70.0%
! GGTGGTGGCCCATCACACGG+TGG + tig0009218:32302-32321 Msa1346740:CDS 70.0%
!! AACGCCGGTGTGCCGGCTCA+GGG + tig0009218:32365-32384 Msa1346740:CDS 70.0%
!! TAAGGAGCGCCACCGGGACC+AGG - tig0009218:32617-32636 None:intergenic 70.0%
! GGCGCATTCGGTGGAGGAGC+CGG - tig0009218:31888-31907 None:intergenic 70.0%
! ACCGGTGGCGCATTCGGTGG+AGG - tig0009218:31894-31913 None:intergenic 70.0%
GACACCGGTGGCGCATTCGG+TGG - tig0009218:31897-31916 None:intergenic 70.0%
! GGTGGTGGCCCATCACACGG+TGG + tig0009218:32302-32321 Msa1346740:CDS 70.0%
!! AACGCCGGTGTGCCGGCTCA+GGG + tig0009218:32365-32384 Msa1346740:CDS 70.0%
!! TAAGGAGCGCCACCGGGACC+AGG - tig0009218:32617-32636 None:intergenic 70.0%
!! CAACGCCGGTGTGCCGGCTC+AGG + tig0009218:32364-32383 Msa1346740:CDS 75.0%
GCGCCACCGGGACCAGGATG+AGG - tig0009218:32611-32630 None:intergenic 75.0%
!! CAACGCCGGTGTGCCGGCTC+AGG + tig0009218:32364-32383 Msa1346740:CDS 75.0%
GCGCCACCGGGACCAGGATG+AGG - tig0009218:32611-32630 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
tig0009218 gene 31147 32649 31147 ID=Msa1346740;Name=Msa1346740
tig0009218 mRNA 31147 32649 31147 ID=Msa1346740-mRNA-1;Parent=Msa1346740;Name=Msa1346740-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|500
tig0009218 exon 31147 32649 31147 ID=Msa1346740-mRNA-1:exon:5617;Parent=Msa1346740-mRNA-1
tig0009218 CDS 31147 32649 31147 ID=Msa1346740-mRNA-1:cds;Parent=Msa1346740-mRNA-1
Gene Sequence

>Msa1346740

ATGGCCAAGAAACGAAAGCTTCGATCTTCTGACCCTGAACCCACCAAACAAGCCGAACCCGAACCCCAACAAGAAGAAGTAGCCGAAGAAGAACCAACAACACAAGAAGAAGAAATCACCCCGATTGAAGAAGATCAACCTCAAAACGAAGGAGAAGGTGAAGAAGAGCAAGAAGAGGAGGTTGCAGAAGATGAAGAGGATGATCAACAAGGAGAAGACGAAACCCTAGAAAATCAACAACAAGAAGGTGGCGGTGAAGCTTCAAACAACGCTGCCGTGTCGGATCAGACTGTGAAGGTGGAAGCTAACGGTGGTGGTGAGAACAATAACAACGAAGAACAAGAGGAAGATCTTGAATTGGAAGATGAGCCTGTTGAGAAGCTTCTAGAACCATTCACGAAGGAGCAATTACACGTGCTTGTGAAGCAAGCGGTTGAGAAGTATCCAGATCTGTCTGAGAATGTTCGTCAGCTGGCTGATGTGGACCCCGCTCACCGGAAAATCTTTGTTCATGGTCTTGGTTGGGATGCTACTGCTGAAACGCTAACCACCACGTTTTCGAAGTACGGTGAAATTGAAGATTGTAAGGCTGTGACTGATAAGAATTCTGGAAAATCGAAAGGTTATGCTTTTATTTTGTTTAAGCATCGGACTGGGTGTCGTCGGGCGTTAAAGCAGCCGCAGAAAGTGATTGGGAATAGGACTACATCGTGTCAATTGGCTTCGGCTGGACCTGTTCCGGCTCCTCCACCGAATGCGCCACCGGTGTCTGAGTATACTCAAAGGAAGATTTTTGTGAGTAATGTGAGTTCTGATATTGATCCTCAGAAGCTGCTTGAGTTTTTCAAGCAGTTTGGAGAGGTGGATGATGGTCCATTGGGGTTGGATAAGGCGACTGGGAAGCCGAAGGGTTTTGCGCTGTTTGTTTATAAGACGGTTGAGAGTGCTAAGAAGGCGTTGGAAGAGCCGAATAAGGTGTTCGAGGGACATACTTTGTATTGTCAGAAGGCTGTTGATGGTCCTAAGGGTTACAACAAGGGGGGTCATTATCAGCAGCAGCAACATCATCATCAGCCGCATCATTCGCATCATCACCATCACGGTGGTGGTGGTGGTCACTACAATCCAAGGAAAGAAAAGAAGTATTCACATGGTGGTGGTGGCCCATCACACGGTGGTCACTTGATGGCTCCTACTGGTCCTGCTGGTGGTGGTTACAACGCCGGTGTGCCGGCTCAGGGATTGAATCCGGCTCTTGGACAGGCTTTGTCTGCTTTGCTTGCTAATCAAGGAGCTGGATTGGGACTTGGGAATTTGCTTGGAGGTCTTGGTGGTGCGCCGGTGAATCAAGCTGGTCCTCCTGCTGCTGCGTATGGTAATCAGGCTGCTATGGGATATGGCCAGCCTGGGTTGCAGCCACAATACCAGAATCCTCAGCTGGGTCAAGGTGGTGGTGTTAGACCTCATCCTGGTCCCGGTGGCGCTCCTTACATGGGTCACTAG

Protein sequence

>Msa1346740

MAKKRKLRSSDPEPTKQAEPEPQQEEVAEEEPTTQEEEITPIEEDQPQNEGEGEEEQEEEVAEDEEDDQQGEDETLENQQQEGGGEASNNAAVSDQTVKVEANGGGENNNNEEQEEDLELEDEPVEKLLEPFTKEQLHVLVKQAVEKYPDLSENVRQLADVDPAHRKIFVHGLGWDATAETLTTTFSKYGEIEDCKAVTDKNSGKSKGYAFILFKHRTGCRRALKQPQKVIGNRTTSCQLASAGPVPAPPPNAPPVSEYTQRKIFVSNVSSDIDPQKLLEFFKQFGEVDDGPLGLDKATGKPKGFALFVYKTVESAKKALEEPNKVFEGHTLYCQKAVDGPKGYNKGGHYQQQQHHHQPHHSHHHHHGGGGGHYNPRKEKKYSHGGGGPSHGGHLMAPTGPAGGGYNAGVPAQGLNPALGQALSALLANQGAGLGLGNLLGGLGGAPVNQAGPPAAAYGNQAAMGYGQPGLQPQYQNPQLGQGGGVRPHPGPGGAPYMGH*