Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280560 | A0A072TQ72 | 92.184 | 435 | 28 | 2 | 1 | 434 | 1 | 430 | 0.0 | 746 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002540 | Msa1280560 | 0.819772 | 9.746033e-53 | -8.615850e-47 |
| Msa0008340 | Msa1280560 | 0.820710 | 5.941134e-53 | -8.615850e-47 |
| Msa0008410 | Msa1280560 | 0.822190 | 2.704813e-53 | -8.615850e-47 |
| Msa0012440 | Msa1280560 | 0.810620 | 1.052832e-50 | -8.615850e-47 |
| Msa0027390 | Msa1280560 | 0.801060 | 1.076060e-48 | -8.615850e-47 |
| Msa0032370 | Msa1280560 | 0.842714 | 2.184029e-58 | -8.615850e-47 |
| Msa0044020 | Msa1280560 | 0.801317 | 9.531270e-49 | -8.615850e-47 |
| Msa0047980 | Msa1280560 | 0.839295 | 1.725456e-57 | -8.615850e-47 |
| Msa0057240 | Msa1280560 | 0.815896 | 7.307486e-52 | -8.615850e-47 |
| Msa0064350 | Msa1280560 | 0.809832 | 1.557008e-50 | -8.615850e-47 |
| Msa0069330 | Msa1280560 | 0.839578 | 1.456863e-57 | -8.615850e-47 |
| Msa0073670 | Msa1280560 | 0.813963 | 1.961828e-51 | -8.615850e-47 |
| Msa0074750 | Msa1280560 | 0.804361 | 2.241724e-49 | -8.615850e-47 |
| Msa0076000 | Msa1280560 | 0.804022 | 2.636814e-49 | -8.615850e-47 |
| Msa0077200 | Msa1280560 | 0.811180 | 7.963282e-51 | -8.615850e-47 |
| Msa0083920 | Msa1280560 | 0.806711 | 7.205260e-50 | -8.615850e-47 |
| Msa0092670 | Msa1280560 | -0.813835 | 2.093202e-51 | -8.615850e-47 |
| Msa0092690 | Msa1280560 | -0.810023 | 1.416393e-50 | -8.615850e-47 |
| Msa0092740 | Msa1280560 | -0.802171 | 6.365640e-49 | -8.615850e-47 |
| Msa0095380 | Msa1280560 | 0.809407 | 1.921734e-50 | -8.615850e-47 |
| Msa0104550 | Msa1280560 | 0.828133 | 1.064988e-54 | -8.615850e-47 |
| Msa0619980 | Msa1280560 | 0.815991 | 6.959419e-52 | -8.615850e-47 |
| Msa0628290 | Msa1280560 | 0.806950 | 6.413011e-50 | -8.615850e-47 |
| Msa0638610 | Msa1280560 | 0.812315 | 4.510664e-51 | -8.615850e-47 |
| Msa0639120 | Msa1280560 | 0.819101 | 1.385685e-52 | -8.615850e-47 |
| Msa0642720 | Msa1280560 | 0.861194 | 1.217912e-63 | -8.615850e-47 |
| Msa0657750 | Msa1280560 | 0.820874 | 5.444787e-53 | -8.615850e-47 |
| Msa0663900 | Msa1280560 | 0.802501 | 5.443602e-49 | -8.615850e-47 |
| Msa0680240 | Msa1280560 | 0.804505 | 2.091848e-49 | -8.615850e-47 |
| Msa0681800 | Msa1280560 | 0.830318 | 3.142024e-55 | -8.615850e-47 |
| Msa0687630 | Msa1280560 | 0.815689 | 8.128065e-52 | -8.615850e-47 |
| Msa0690160 | Msa1280560 | 0.812684 | 3.745595e-51 | -8.615850e-47 |
| Msa0692840 | Msa1280560 | 0.810850 | 9.388695e-51 | -8.615850e-47 |
| Msa0697690 | Msa1280560 | 0.836402 | 9.557103e-57 | -8.615850e-47 |
| Msa0703230 | Msa1280560 | 0.822420 | 2.392238e-53 | -8.615850e-47 |
| Msa0706370 | Msa1280560 | 0.813321 | 2.715907e-51 | -8.615850e-47 |
| Msa0713820 | Msa1280560 | 0.817570 | 3.079759e-52 | -8.615850e-47 |
| Msa0730900 | Msa1280560 | 0.813816 | 2.113445e-51 | -8.615850e-47 |
| Msa0734960 | Msa1280560 | 0.804265 | 2.347556e-49 | -8.615850e-47 |
| Msa0740640 | Msa1280560 | 0.802039 | 6.778833e-49 | -8.615850e-47 |
| Msa0752510 | Msa1280560 | 0.804362 | 2.240364e-49 | -8.615850e-47 |
| Msa0755340 | Msa1280560 | 0.820113 | 8.144267e-53 | -8.615850e-47 |
| Msa0756060 | Msa1280560 | 0.800435 | 1.443234e-48 | -8.615850e-47 |
| Msa0766580 | Msa1280560 | 0.804043 | 2.610124e-49 | -8.615850e-47 |
| Msa0767220 | Msa1280560 | 0.805682 | 1.186399e-49 | -8.615850e-47 |
| Msa0770350 | Msa1280560 | 0.824210 | 9.133704e-54 | -8.615850e-47 |
| Msa0784060 | Msa1280560 | 0.800459 | 1.427391e-48 | -8.615850e-47 |
| Msa0788770 | Msa1280560 | 0.804889 | 1.738903e-49 | -8.615850e-47 |
| Msa0791100 | Msa1280560 | 0.800020 | 1.752842e-48 | -8.615850e-47 |
| Msa0797750 | Msa1280560 | 0.807359 | 5.252200e-50 | -8.615850e-47 |
| Msa0814320 | Msa1280560 | 0.812831 | 3.477886e-51 | -8.615850e-47 |
| Msa0824640 | Msa1280560 | 0.803225 | 3.858311e-49 | -8.615850e-47 |
| Msa0828920 | Msa1280560 | 0.830198 | 3.360947e-55 | -8.615850e-47 |
| Msa0835280 | Msa1280560 | 0.801927 | 7.145401e-49 | -8.615850e-47 |
| Msa0124990 | Msa1280560 | 0.801021 | 1.096102e-48 | -8.615850e-47 |
| Msa0140300 | Msa1280560 | 0.826936 | 2.062811e-54 | -8.615850e-47 |
| Msa0143380 | Msa1280560 | 0.801405 | 9.143855e-49 | -8.615850e-47 |
| Msa0148100 | Msa1280560 | 0.809532 | 1.806691e-50 | -8.615850e-47 |
| Msa0149560 | Msa1280560 | 0.814419 | 1.555709e-51 | -8.615850e-47 |
| Msa0150570 | Msa1280560 | 0.816778 | 4.640222e-52 | -8.615850e-47 |
| Msa0165300 | Msa1280560 | 0.801766 | 7.713845e-49 | -8.615850e-47 |
| Msa0184020 | Msa1280560 | 0.838802 | 2.315654e-57 | -8.615850e-47 |
| Msa0185590 | Msa1280560 | 0.820253 | 7.561163e-53 | -8.615850e-47 |
| Msa0186890 | Msa1280560 | 0.819666 | 1.030365e-52 | -8.615850e-47 |
| Msa0193890 | Msa1280560 | 0.806921 | 6.505306e-50 | -8.615850e-47 |
| Msa0205850 | Msa1280560 | 0.840143 | 1.038317e-57 | -8.615850e-47 |
| Msa0219190 | Msa1280560 | 0.822498 | 2.293715e-53 | -8.615850e-47 |
| Msa0227510 | Msa1280560 | 0.807582 | 4.710983e-50 | -8.615850e-47 |
| Msa0232320 | Msa1280560 | 0.824612 | 7.346741e-54 | -8.615850e-47 |
| Msa0235890 | Msa1280560 | 0.805629 | 1.217469e-49 | -8.615850e-47 |
| Msa0236980 | Msa1280560 | 0.805791 | 1.125296e-49 | -8.615850e-47 |
| Msa1227690 | Msa1280560 | 0.817638 | 2.972485e-52 | -8.615850e-47 |
| Msa1228290 | Msa1280560 | 0.802731 | 4.882111e-49 | -8.615850e-47 |
| Msa1228890 | Msa1280560 | 0.862773 | 3.996714e-64 | -8.615850e-47 |
| Msa1236100 | Msa1280560 | 0.806830 | 6.800164e-50 | -8.615850e-47 |
| Msa1239080 | Msa1280560 | 0.902719 | 7.273438e-79 | -8.615850e-47 |
| Msa1254710 | Msa1280560 | 0.837875 | 4.015184e-57 | -8.615850e-47 |
| Msa1255190 | Msa1280560 | 0.809198 | 2.129838e-50 | -8.615850e-47 |
| Msa1267840 | Msa1280560 | 0.827600 | 1.430189e-54 | -8.615850e-47 |
| Msa1280560 | Msa1294840 | 0.810389 | 1.181324e-50 | -8.615850e-47 |
| Msa1280560 | Msa1295630 | 0.836440 | 9.348433e-57 | -8.615850e-47 |
| Msa1280560 | Msa1299360 | 0.819256 | 1.277885e-52 | -8.615850e-47 |
| Msa1280560 | Msa1307950 | 0.819163 | 1.341408e-52 | -8.615850e-47 |
| Msa1280560 | Msa1309130 | 0.814230 | 1.713025e-51 | -8.615850e-47 |
| Msa1280560 | Msa1319770 | 0.862285 | 5.647347e-64 | -8.615850e-47 |
| Msa1280560 | Msa1320740 | 0.801754 | 7.755454e-49 | -8.615850e-47 |
| Msa1280560 | Msa1327760 | 0.812761 | 3.602573e-51 | -8.615850e-47 |
| Msa1280560 | Msa1338250 | 0.805646 | 1.207570e-49 | -8.615850e-47 |
| Msa1280560 | Msa1340020 | 0.850229 | 1.943290e-60 | -8.615850e-47 |
| Msa1280560 | Msa1346740 | 0.817194 | 3.741841e-52 | -8.615850e-47 |
| Msa1280560 | Msa1348360 | 0.828975 | 6.665571e-55 | -8.615850e-47 |
| Msa1280560 | Msa1362510 | 0.817858 | 2.650970e-52 | -8.615850e-47 |
| Msa1280560 | Msa1365150 | 0.843588 | 1.277474e-58 | -8.615850e-47 |
| Msa1280560 | Msa1365200 | 0.803068 | 4.158469e-49 | -8.615850e-47 |
| Msa1280560 | Msa1367880 | 0.847419 | 1.170168e-59 | -8.615850e-47 |
| Msa1280560 | Msa1393800 | 0.805983 | 1.025442e-49 | -8.615850e-47 |
| Msa1280560 | Msa1404190 | 0.803579 | 3.258823e-49 | -8.615850e-47 |
| Msa1280560 | Msa1404730 | 0.805254 | 1.458590e-49 | -8.615850e-47 |
| Msa1280560 | Msa1420060 | 0.827593 | 1.435798e-54 | -8.615850e-47 |
| Msa1280560 | Msa1427060 | 0.818611 | 1.791229e-52 | -8.615850e-47 |
| Msa1280560 | Msa1429420 | 0.808436 | 3.100593e-50 | -8.615850e-47 |
| Msa1280560 | Msa1431040 | 0.825154 | 5.470535e-54 | -8.615850e-47 |
| Msa1280560 | Msa1435750 | 0.816654 | 4.946864e-52 | -8.615850e-47 |
| Msa1280560 | Msa1437460 | 0.807506 | 4.889036e-50 | -8.615850e-47 |
| Msa1280560 | Msa1438640 | 0.835628 | 1.502348e-56 | -8.615850e-47 |
| Msa1280560 | Msa1448510 | 0.805423 | 1.344486e-49 | -8.615850e-47 |
| Msa1280560 | Msa1466460 | 0.841503 | 4.569263e-58 | -8.615850e-47 |
| Msa1280560 | Msa1466590 | 0.802088 | 6.623488e-49 | -8.615850e-47 |
| Msa0372660 | Msa1280560 | 0.800200 | 1.611572e-48 | -8.615850e-47 |
| Msa0376040 | Msa1280560 | 0.800903 | 1.158466e-48 | -8.615850e-47 |
| Msa0378980 | Msa1280560 | 0.835022 | 2.136840e-56 | -8.615850e-47 |
| Msa0402330 | Msa1280560 | 0.803728 | 3.034548e-49 | -8.615850e-47 |
| Msa0413450 | Msa1280560 | 0.826597 | 2.485934e-54 | -8.615850e-47 |
| Msa0415810 | Msa1280560 | 0.819601 | 1.066258e-52 | -8.615850e-47 |
| Msa0416400 | Msa1280560 | 0.801644 | 8.169283e-49 | -8.615850e-47 |
| Msa0419820 | Msa1280560 | 0.804972 | 1.670835e-49 | -8.615850e-47 |
| Msa0426330 | Msa1280560 | 0.855910 | 4.593533e-62 | -8.615850e-47 |
| Msa0432070 | Msa1280560 | 0.826620 | 2.454521e-54 | -8.615850e-47 |
| Msa0448750 | Msa1280560 | 0.807301 | 5.405105e-50 | -8.615850e-47 |
| Msa0449820 | Msa1280560 | 0.816633 | 5.002059e-52 | -8.615850e-47 |
| Msa0452960 | Msa1280560 | 0.801029 | 1.091740e-48 | -8.615850e-47 |
| Msa0986920 | Msa1280560 | 0.844279 | 8.342706e-59 | -8.615850e-47 |
| Msa0993530 | Msa1280560 | 0.820376 | 7.086646e-53 | -8.615850e-47 |
| Msa0996080 | Msa1280560 | 0.804944 | 1.693953e-49 | -8.615850e-47 |
| Msa1000940 | Msa1280560 | 0.810444 | 1.149259e-50 | -8.615850e-47 |
| Msa1004420 | Msa1280560 | 0.836066 | 1.163059e-56 | -8.615850e-47 |
| Msa1018050 | Msa1280560 | 0.807459 | 5.002092e-50 | -8.615850e-47 |
| Msa1037920 | Msa1280560 | 0.831069 | 2.056947e-55 | -8.615850e-47 |
| Msa1046300 | Msa1280560 | 0.800849 | 1.188333e-48 | -8.615850e-47 |
| Msa1049010 | Msa1280560 | 0.803235 | 3.840294e-49 | -8.615850e-47 |
| Msa1063950 | Msa1280560 | 0.812539 | 4.030254e-51 | -8.615850e-47 |
| Msa1091560 | Msa1280560 | 0.818392 | 2.007945e-52 | -8.615850e-47 |
| Msa1099910 | Msa1280560 | 0.801065 | 1.073561e-48 | -8.615850e-47 |
| Msa1100720 | Msa1280560 | 0.820583 | 6.353633e-53 | -8.615850e-47 |
| Msa0245940 | Msa1280560 | 0.801031 | 1.090895e-48 | -8.615850e-47 |
| Msa0259560 | Msa1280560 | 0.801873 | 7.331588e-49 | -8.615850e-47 |
| Msa0260830 | Msa1280560 | 0.821126 | 4.764691e-53 | -8.615850e-47 |
| Msa0274360 | Msa1280560 | 0.801160 | 1.026608e-48 | -8.615850e-47 |
| Msa0276920 | Msa1280560 | 0.803713 | 3.056823e-49 | -8.615850e-47 |
| Msa0281360 | Msa1280560 | 0.848551 | 5.703720e-60 | -8.615850e-47 |
| Msa0282890 | Msa1280560 | 0.813774 | 2.158663e-51 | -8.615850e-47 |
| Msa0287310 | Msa1280560 | 0.825586 | 4.324751e-54 | -8.615850e-47 |
| Msa0289950 | Msa1280560 | 0.824221 | 9.077635e-54 | -8.615850e-47 |
| Msa0298120 | Msa1280560 | 0.822237 | 2.637104e-53 | -8.615850e-47 |
| Msa0298240 | Msa1280560 | 0.815263 | 1.011242e-51 | -8.615850e-47 |
| Msa0311700 | Msa1280560 | 0.830796 | 2.399480e-55 | -8.615850e-47 |
| Msa0316800 | Msa1280560 | 0.814133 | 1.798916e-51 | -8.615850e-47 |
| Msa0321170 | Msa1280560 | 0.815320 | 9.820358e-52 | -8.615850e-47 |
| Msa0321190 | Msa1280560 | 0.842350 | 2.728386e-58 | -8.615850e-47 |
| Msa0325840 | Msa1280560 | 0.802239 | 6.164797e-49 | -8.615850e-47 |
| Msa0325850 | Msa1280560 | 0.823548 | 1.305320e-53 | -8.615850e-47 |
| Msa0328210 | Msa1280560 | 0.808339 | 3.251970e-50 | -8.615850e-47 |
| Msa0333920 | Msa1280560 | 0.822569 | 2.208927e-53 | -8.615850e-47 |
| Msa0334040 | Msa1280560 | 0.836050 | 1.174227e-56 | -8.615850e-47 |
| Msa0335040 | Msa1280560 | 0.801657 | 8.121233e-49 | -8.615850e-47 |
| Msa0336090 | Msa1280560 | 0.800362 | 1.493526e-48 | -8.615850e-47 |
| Msa0355270 | Msa1280560 | 0.809497 | 1.837892e-50 | -8.615850e-47 |
| Msa1113590 | Msa1280560 | 0.804021 | 2.637963e-49 | -8.615850e-47 |
| Msa1113670 | Msa1280560 | 0.817891 | 2.606169e-52 | -8.615850e-47 |
| Msa1126510 | Msa1280560 | 0.800745 | 1.247476e-48 | -8.615850e-47 |
| Msa1126770 | Msa1280560 | 0.823637 | 1.244339e-53 | -8.615850e-47 |
| Msa1129980 | Msa1280560 | 0.803289 | 3.742007e-49 | -8.615850e-47 |
| Msa1174100 | Msa1280560 | 0.814815 | 1.270931e-51 | -8.615850e-47 |
| Msa1175330 | Msa1280560 | 0.822119 | 2.809410e-53 | -8.615850e-47 |
| Msa1178050 | Msa1280560 | 0.807882 | 4.067935e-50 | -8.615850e-47 |
| Msa1179940 | Msa1280560 | 0.804919 | 1.714703e-49 | -8.615850e-47 |
| Msa1179970 | Msa1280560 | 0.802632 | 5.116847e-49 | -8.615850e-47 |
| Msa1183660 | Msa1280560 | 0.805237 | 1.470651e-49 | -8.615850e-47 |
| Msa1184370 | Msa1280560 | 0.809678 | 1.680406e-50 | -8.615850e-47 |
| Msa1185130 | Msa1280560 | 0.846555 | 2.017819e-59 | -8.615850e-47 |
| Msa1185540 | Msa1280560 | 0.861482 | 9.949920e-64 | -8.615850e-47 |
| Msa1201120 | Msa1280560 | 0.810958 | 8.898321e-51 | -8.615850e-47 |
| Msa1210400 | Msa1280560 | 0.824364 | 8.403409e-54 | -8.615850e-47 |
| Msa0484780 | Msa1280560 | 0.802771 | 4.789225e-49 | -8.615850e-47 |
| Msa0485420 | Msa1280560 | 0.805440 | 1.333616e-49 | -8.615850e-47 |
| Msa0497420 | Msa1280560 | 0.824801 | 6.629821e-54 | -8.615850e-47 |
| Msa0505150 | Msa1280560 | 0.809282 | 2.043449e-50 | -8.615850e-47 |
| Msa0506890 | Msa1280560 | 0.811051 | 8.491879e-51 | -8.615850e-47 |
| Msa0510290 | Msa1280560 | 0.807898 | 4.035816e-50 | -8.615850e-47 |
| Msa0521880 | Msa1280560 | 0.807609 | 4.649727e-50 | -8.615850e-47 |
| Msa0541860 | Msa1280560 | 0.816968 | 4.207136e-52 | -8.615850e-47 |
| Msa0546300 | Msa1280560 | 0.842757 | 2.127625e-58 | -8.615850e-47 |
| Msa0552810 | Msa1280560 | 0.834696 | 2.580823e-56 | -8.615850e-47 |
| Msa0555400 | Msa1280560 | 0.802615 | 5.156961e-49 | -8.615850e-47 |
| Msa0560470 | Msa1280560 | 0.829922 | 3.923898e-55 | -8.615850e-47 |
| Msa0574890 | Msa1280560 | 0.807243 | 5.558380e-50 | -8.615850e-47 |
| Msa0577220 | Msa1280560 | 0.815734 | 7.941274e-52 | -8.615850e-47 |
| Msa0581070 | Msa1280560 | 0.818364 | 2.037025e-52 | -8.615850e-47 |
| Msa0591060 | Msa1280560 | 0.805477 | 1.310101e-49 | -8.615850e-47 |
| Msa0862100 | Msa1280560 | 0.805713 | 1.168778e-49 | -8.615850e-47 |
| Msa0863370 | Msa1280560 | 0.816877 | 4.409650e-52 | -8.615850e-47 |
| Msa0864010 | Msa1280560 | 0.808121 | 3.618582e-50 | -8.615850e-47 |
| Msa0877410 | Msa1280560 | 0.802539 | 5.347242e-49 | -8.615850e-47 |
| Msa0881020 | Msa1280560 | 0.802252 | 6.126115e-49 | -8.615850e-47 |
| Msa0881030 | Msa1280560 | 0.824059 | 9.908037e-54 | -8.615850e-47 |
| Msa0893810 | Msa1280560 | 0.814354 | 1.608135e-51 | -8.615850e-47 |
| Msa0905550 | Msa1280560 | 0.809690 | 1.670359e-50 | -8.615850e-47 |
| Msa0908050 | Msa1280560 | 0.800765 | 1.235912e-48 | -8.615850e-47 |
| Msa0930780 | Msa1280560 | 0.815176 | 1.057365e-51 | -8.615850e-47 |
| Msa0931950 | Msa1280560 | 0.813017 | 3.166354e-51 | -8.615850e-47 |
| Msa0933440 | Msa1280560 | 0.812961 | 3.257100e-51 | -8.615850e-47 |
| Msa0937550 | Msa1280560 | 0.805605 | 1.231351e-49 | -8.615850e-47 |
| Msa0959010 | Msa1280560 | 0.804825 | 1.793685e-49 | -8.615850e-47 |
| Msa0960160 | Msa1280560 | 0.814347 | 1.613418e-51 | -8.615850e-47 |
| Msa0967370 | Msa1280560 | 0.812372 | 4.383413e-51 | -8.615850e-47 |
| Msa0976310 | Msa1280560 | 0.808698 | 2.725098e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280560 | MtrunA17_Chr8g0350771 | 92.184 | 435 | 28 | 2 | 1 | 434 | 1 | 430 | 0.0 | 746 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1280560 | AT4G00770.1 | 30.617 | 454 | 247 | 20 | 11 | 434 | 1 | 416 | 5.48e-35 | 135 |
Find 86 sgRNAs with CRISPR-Local
Find 150 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTCTTTCACCTTTGCATCTT+TGG | 0.045094 | 8_3:-19192452 | None:intergenic |
| GACATTCCTCTTTGTGAAAA+TGG | 0.164629 | 8_3:+19192104 | Msa1280560:exon |
| ATCCTTCATCGTTCCTCTTT+TGG | 0.190394 | 8_3:-19194256 | None:intergenic |
| GTATTTCGGATGTACATATT+TGG | 0.190940 | 8_3:+19194493 | Msa1280560:three_prime_UTR |
| TCTTGGTGACCAATTTAAAA+TGG | 0.190983 | 8_3:-19191930 | None:intergenic |
| AAGAAATCCTTCAACATTCT+TGG | 0.218670 | 8_3:-19192165 | None:intergenic |
| TTAAAATATTCACATGATTC+TGG | 0.219032 | 8_3:-19194556 | None:intergenic |
| CATGAGTTTGAGTTTGAGTT+TGG | 0.226769 | 8_3:-19192198 | None:intergenic |
| GAGAAACTTACTTTCAATAT+TGG | 0.253806 | 8_3:-19193534 | None:intergenic |
| TAGACTCTTGATAAAGAAAA+AGG | 0.301151 | 8_3:-19192016 | None:intergenic |
| CAGTCCAGTTTCAGTTCTTC+GGG | 0.305819 | 8_3:+19193472 | Msa1280560:CDS |
| TTGGATGAAAATTTATACTA+TGG | 0.316942 | 8_3:+19194044 | Msa1280560:CDS |
| ATTCGGTAGCATCGTTCGTT+GGG | 0.326405 | 8_3:+19192769 | Msa1280560:CDS |
| TTTCACCCCTAAAAGTATTT+CGG | 0.330567 | 8_3:+19194479 | Msa1280560:exon |
| ATTTGAATGGAGTTGGTAAT+TGG | 0.339327 | 8_3:-19192261 | None:intergenic |
| CTATAAATGATGATTGTTCT+TGG | 0.340797 | 8_3:-19191947 | None:intergenic |
| ACAGTCCAGTTTCAGTTCTT+CGG | 0.354473 | 8_3:+19193471 | Msa1280560:CDS |
| GCAACCCGAAGAACTGAAAC+TGG | 0.366892 | 8_3:-19193476 | None:intergenic |
| GGAGCTAGATGAGATGGTTA+TGG | 0.368563 | 8_3:+19194415 | Msa1280560:CDS |
| ACTTATAAGTGGTGAATTGC+GGG | 0.371633 | 8_3:+19192056 | Msa1280560:five_prime_UTR |
| AAAGTAATGAATGAAATGAT+AGG | 0.394858 | 8_3:-19191900 | None:intergenic |
| TAATGATAACTTGCGTGATA+AGG | 0.395220 | 8_3:-19192412 | None:intergenic |
| CTTGGTGACCAATTTAAAAT+GGG | 0.405157 | 8_3:-19191929 | None:intergenic |
| TTTCAATATTGGCTAGGCTT+TGG | 0.406342 | 8_3:-19193523 | None:intergenic |
| AGATGCTTATATCAAGGAAA+TGG | 0.417722 | 8_3:+19194361 | Msa1280560:CDS |
| CAATGAGAGACATTCATCTA+AGG | 0.425187 | 8_3:-19194024 | None:intergenic |
| GAACGATGAAGGATTTGAGT+TGG | 0.441325 | 8_3:+19194265 | Msa1280560:CDS |
| CATTCTTGGTCTTCTCTCCA+TGG | 0.454188 | 8_3:-19192151 | None:intergenic |
| TAATGAAAATTGCTGAGGAT+TGG | 0.457153 | 8_3:+19194291 | Msa1280560:CDS |
| CTTAGATGAATGTCTCTCAT+TGG | 0.457276 | 8_3:+19194025 | Msa1280560:CDS |
| CTGGACTGTGTTGTTCATCT+TGG | 0.457314 | 8_3:-19193457 | None:intergenic |
| GATTCGGTAGCATCGTTCGT+TGG | 0.463111 | 8_3:+19192768 | Msa1280560:CDS |
| TGAGATGGTTATGGAGATTG+AGG | 0.463953 | 8_3:+19194424 | Msa1280560:CDS |
| TGATGAGGAGCTAGATGAGA+TGG | 0.470146 | 8_3:+19194409 | Msa1280560:CDS |
| AAGGAAATGGATAGGAGAGA+TGG | 0.470909 | 8_3:+19194374 | Msa1280560:CDS |
| AAAGGTGATAACGGCGGTGA+TGG | 0.474408 | 8_3:-19192561 | None:intergenic |
| TGGTAGTGAGAGGATGGTGG+AGG | 0.494083 | 8_3:-19192385 | None:intergenic |
| TACTTATAAGTGGTGAATTG+CGG | 0.501723 | 8_3:+19192055 | Msa1280560:five_prime_UTR |
| AGAACAATCATCATTTATAG+TGG | 0.509727 | 8_3:+19191950 | Msa1280560:five_prime_UTR |
| AGAACATAAAGACGACGATA+AGG | 0.510127 | 8_3:+19194070 | Msa1280560:CDS |
| TCAAACTCATGTTCTTCAAG+TGG | 0.511370 | 8_3:+19192210 | Msa1280560:CDS |
| ATAGGAGAGATGGGTGGAGT+AGG | 0.513651 | 8_3:+19194384 | Msa1280560:CDS |
| TGAAGAAGAAGTTTGGATTG+AGG | 0.513683 | 8_3:+19194112 | Msa1280560:CDS |
| GAGAAGACCAAGAATGTTGA+AGG | 0.515311 | 8_3:+19192158 | Msa1280560:CDS |
| AGCATCGTTCGTTGGGGACA+AGG | 0.516686 | 8_3:+19192776 | Msa1280560:CDS |
| AGGAAATGGATAGGAGAGAT+GGG | 0.519654 | 8_3:+19194375 | Msa1280560:CDS |
| GTAGTGACGGTGATTCTAGT+TGG | 0.528108 | 8_3:+19192649 | Msa1280560:CDS |
| GGTTCGTGGTAGTGAGAGGA+TGG | 0.528255 | 8_3:-19192391 | None:intergenic |
| AAACTTCACGTACTTATAAG+TGG | 0.528971 | 8_3:+19192045 | Msa1280560:five_prime_UTR |
| ACTTACTTTCAATATTGGCT+AGG | 0.530778 | 8_3:-19193529 | None:intergenic |
| AACCAAAAGAGGAACGATGA+AGG | 0.540411 | 8_3:+19194254 | Msa1280560:CDS |
| TCGTGGTAGTGAGAGGATGG+TGG | 0.542013 | 8_3:-19192388 | None:intergenic |
| ACAAAACGCCGATAATCAAA+AGG | 0.543210 | 8_3:-19192579 | None:intergenic |
| TAATAAAGATGCTTATATCA+AGG | 0.544634 | 8_3:+19194355 | Msa1280560:CDS |
| AAGTAATGAATGAAATGATA+GGG | 0.546928 | 8_3:-19191899 | None:intergenic |
| ATGATGATGAATGTGTATGA+TGG | 0.561849 | 8_3:-19192284 | None:intergenic |
| GACATTCATCTAAGGTTACC+AGG | 0.562283 | 8_3:-19194016 | None:intergenic |
| ATGATGGATTTGAATGGAGT+TGG | 0.566270 | 8_3:-19192268 | None:intergenic |
| TAAAGACGACGATAAGGAAG+AGG | 0.567208 | 8_3:+19194076 | Msa1280560:CDS |
| CGATAATCAAAAGGTGATAA+CGG | 0.569729 | 8_3:-19192570 | None:intergenic |
| AACTTGCGTGATAAGGTTCG+TGG | 0.577209 | 8_3:-19192405 | None:intergenic |
| TGGGTGGAGTAGGTTTGATG+AGG | 0.582244 | 8_3:+19194394 | Msa1280560:CDS |
| CTTATATCAAGGAAATGGAT+AGG | 0.583522 | 8_3:+19194366 | Msa1280560:CDS |
| ATGTGTATGATGGATTTGAA+TGG | 0.585244 | 8_3:-19192274 | None:intergenic |
| AACGACGACGTTGAAGAGAG+TGG | 0.596261 | 8_3:+19192711 | Msa1280560:CDS |
| GGAGATAATGAAAATTGCTG+AGG | 0.596531 | 8_3:+19194286 | Msa1280560:CDS |
| AGAACAAGCCAAAGATGCAA+AGG | 0.605783 | 8_3:+19192444 | Msa1280560:CDS |
| GGTAGTGAGAGGATGGTGGA+GGG | 0.606737 | 8_3:-19192384 | None:intergenic |
| GGTGACCAATTTAAAATGGG+AGG | 0.609313 | 8_3:-19191926 | None:intergenic |
| AATCGAAATCAAAACCAGTA+CGG | 0.615967 | 8_3:+19192476 | Msa1280560:CDS |
| GTGGTAATAGAAACCAAAAG+AGG | 0.617558 | 8_3:+19194243 | Msa1280560:CDS |
| TTCGGTAGCATCGTTCGTTG+GGG | 0.621066 | 8_3:+19192770 | Msa1280560:CDS |
| AATGAATGAAATGATAGGGT+TGG | 0.621508 | 8_3:-19191895 | None:intergenic |
| GGCGGTGATGGAATCGTCAA+CGG | 0.621680 | 8_3:-19192549 | None:intergenic |
| ACGACGACGTTGAAGAGAGT+GGG | 0.622525 | 8_3:+19192712 | Msa1280560:CDS |
| ATAAGGTTCGTGGTAGTGAG+AGG | 0.628338 | 8_3:-19192395 | None:intergenic |
| AGACGACGATAAGGAAGAGG+AGG | 0.638078 | 8_3:+19194079 | Msa1280560:CDS |
| ACTACTGCAACGACTTGTTG+TGG | 0.645608 | 8_3:+19192621 | Msa1280560:CDS |
| AAATGGATAGGAGAGATGGG+TGG | 0.646442 | 8_3:+19194378 | Msa1280560:CDS |
| ATTCCTCTTTGTGAAAATGG+AGG | 0.649158 | 8_3:+19192107 | Msa1280560:exon |
| GAGTCATGCAAAATTTGACC+TGG | 0.651593 | 8_3:+19193998 | Msa1280560:CDS |
| AAATCAAAGACATCATACGT+TGG | 0.656713 | 8_3:+19192502 | Msa1280560:CDS |
| ACAAAGAAGATTCAACACCA+TGG | 0.680203 | 8_3:+19192134 | Msa1280560:CDS |
| GGTGATTCTAGTTGGAGTGA+CGG | 0.694849 | 8_3:+19192657 | Msa1280560:CDS |
| TGTTGTGGTAGTAGTAGTGA+CGG | 0.703793 | 8_3:+19192636 | Msa1280560:CDS |
| TAATCAAAAGGTGATAACGG+CGG | 0.746342 | 8_3:-19192567 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATATTAAAGAAATAATGA+TGG | + | chr8_3:19193047-19193066 | Msa1280560:intron | 10.0% |
| !! | TCATAAAACAAAATAATTTA+TGG | + | chr8_3:19193188-19193207 | Msa1280560:intron | 10.0% |
| !!! | GTTTTTTATGGTTTTTATTA+GGG | - | chr8_3:19192334-19192353 | None:intergenic | 15.0% |
| !!! | TGTTTTTTATGGTTTTTATT+AGG | - | chr8_3:19192335-19192354 | None:intergenic | 15.0% |
| !! | TTCTTTATAGAAAAAAACAA+TGG | + | chr8_3:19192850-19192869 | Msa1280560:intron | 15.0% |
| !! | AATATTCTATCATATTCTAT+CGG | - | chr8_3:19192912-19192931 | None:intergenic | 15.0% |
| !! | TAGAATATGATAGAATATTA+TGG | + | chr8_3:19192913-19192932 | Msa1280560:intron | 15.0% |
| !!! | ACTTATTTTATTTTTTCTGT+CGG | + | chr8_3:19193088-19193107 | Msa1280560:intron | 15.0% |
| !! | ATTTGTGTTCTAATAATTTA+AGG | + | chr8_3:19193158-19193177 | Msa1280560:intron | 15.0% |
| !! | AAAAAATAACATTGTTAGTT+TGG | - | chr8_3:19193350-19193369 | None:intergenic | 15.0% |
| !!! | TACTAATAATGTTTGATTTT+TGG | + | chr8_3:19193930-19193949 | Msa1280560:intron | 15.0% |
| !! | AAGTAATGAATGAAATGATA+GGG | - | chr8_3:19191902-19191921 | None:intergenic | 20.0% |
| !! | AAAGTAATGAATGAAATGAT+AGG | - | chr8_3:19191903-19191922 | None:intergenic | 20.0% |
| !!! | TTGTTTTCATCTTTTTTTGT+CGG | + | chr8_3:19192741-19192760 | Msa1280560:CDS | 20.0% |
| !! | AGATATAGTGCATAAAATAT+AGG | - | chr8_3:19192878-19192897 | None:intergenic | 20.0% |
| !!! | CATTGGTTAATTTAATTGAA+AGG | - | chr8_3:19193559-19193578 | None:intergenic | 20.0% |
| !! | TACAAAATTACTAATTGTGT+TGG | - | chr8_3:19193603-19193622 | None:intergenic | 20.0% |
| !! | AAATTGTTAAATGTCTTGAT+TGG | - | chr8_3:19193807-19193826 | None:intergenic | 20.0% |
| !! | TTGGATGAAAATTTATACTA+TGG | + | chr8_3:19194044-19194063 | Msa1280560:CDS | 20.0% |
| !! | TAATAAAGATGCTTATATCA+AGG | + | chr8_3:19194355-19194374 | Msa1280560:CDS | 20.0% |
| !! | TTAAAATATTCACATGATTC+TGG | - | chr8_3:19194559-19194578 | None:intergenic | 20.0% |
| ! | CTATAAATGATGATTGTTCT+TGG | - | chr8_3:19191950-19191969 | None:intergenic | 25.0% |
| ! | AGAACAATCATCATTTATAG+TGG | + | chr8_3:19191950-19191969 | Msa1280560:five_prime_UTR | 25.0% |
| !! | CGATTCTTTTGTAATAACAA+TGG | - | chr8_3:19191985-19192004 | None:intergenic | 25.0% |
| ! | TAGACTCTTGATAAAGAAAA+AGG | - | chr8_3:19192019-19192038 | None:intergenic | 25.0% |
| !!! | GTAATTGGTTTTATTGTTCT+TGG | - | chr8_3:19192249-19192268 | None:intergenic | 25.0% |
| !!! | TGATTTTTTTAGTGAGTTGT+GGG | + | chr8_3:19192680-19192699 | Msa1280560:CDS | 25.0% |
| !!! | TATTTTATTTTTTCTGTCGG+TGG | + | chr8_3:19193091-19193110 | Msa1280560:intron | 25.0% |
| !!! | ATTTTATTTTTTCTGTCGGT+GGG | + | chr8_3:19193092-19193111 | Msa1280560:intron | 25.0% |
| !! | AAATAACATTGTTAGTTTGG+TGG | - | chr8_3:19193347-19193366 | None:intergenic | 25.0% |
| ! | GAGAAACTTACTTTCAATAT+TGG | - | chr8_3:19193537-19193556 | None:intergenic | 25.0% |
| ! | TCTAATAATGCATAACACAT+TGG | - | chr8_3:19193576-19193595 | None:intergenic | 25.0% |
| !! | AAATTACTAATTGTGTTGGT+TGG | - | chr8_3:19193599-19193618 | None:intergenic | 25.0% |
| !!! | AATTTGTTTTCTTTGAAGCA+CGG | - | chr8_3:19193757-19193776 | None:intergenic | 25.0% |
| ! | AGACATTTAACAATTTCAGT+TGG | + | chr8_3:19193811-19193830 | Msa1280560:intron | 25.0% |
| !!! | TAATGTTTGATTTTTGGAAC+AGG | + | chr8_3:19193936-19193955 | Msa1280560:intron | 25.0% |
| !!! | AATGTTTGATTTTTGGAACA+GGG | + | chr8_3:19193937-19193956 | Msa1280560:intron | 25.0% |
| !!! | AAACTTCTTCTTCAGTTTTT+TGG | - | chr8_3:19194106-19194125 | None:intergenic | 25.0% |
| ! | AAAAAACTGAAGAAGAAGTT+TGG | + | chr8_3:19194105-19194124 | Msa1280560:CDS | 25.0% |
| AATGAATGAAATGATAGGGT+TGG | - | chr8_3:19191898-19191917 | None:intergenic | 30.0% | |
| ! | CTTGGTGACCAATTTAAAAT+GGG | - | chr8_3:19191932-19191951 | None:intergenic | 30.0% |
| ! | TCTTGGTGACCAATTTAAAA+TGG | - | chr8_3:19191933-19191952 | None:intergenic | 30.0% |
| AAACTTCACGTACTTATAAG+TGG | + | chr8_3:19192045-19192064 | Msa1280560:five_prime_UTR | 30.0% | |
| TACTTATAAGTGGTGAATTG+CGG | + | chr8_3:19192055-19192074 | Msa1280560:five_prime_UTR | 30.0% | |
| AAGAAATCCTTCAACATTCT+TGG | - | chr8_3:19192168-19192187 | None:intergenic | 30.0% | |
| !! | ATTTGAATGGAGTTGGTAAT+TGG | - | chr8_3:19192264-19192283 | None:intergenic | 30.0% |
| !! | ATGTGTATGATGGATTTGAA+TGG | - | chr8_3:19192277-19192296 | None:intergenic | 30.0% |
| ! | ATGATGATGAATGTGTATGA+TGG | - | chr8_3:19192287-19192306 | None:intergenic | 30.0% |
| !!! | GAATGTGACGTTGTTTTTTA+TGG | - | chr8_3:19192346-19192365 | None:intergenic | 30.0% |
| ! | TAATGATAACTTGCGTGATA+AGG | - | chr8_3:19192415-19192434 | None:intergenic | 30.0% |
| AATCGAAATCAAAACCAGTA+CGG | + | chr8_3:19192476-19192495 | Msa1280560:CDS | 30.0% | |
| AAATCAAAGACATCATACGT+TGG | + | chr8_3:19192502-19192521 | Msa1280560:CDS | 30.0% | |
| CGATAATCAAAAGGTGATAA+CGG | - | chr8_3:19192573-19192592 | None:intergenic | 30.0% | |
| !! | CGTTATCACCTTTTGATTAT+CGG | + | chr8_3:19192571-19192590 | Msa1280560:CDS | 30.0% |
| !!! | GTGATTTTTTTAGTGAGTTG+TGG | + | chr8_3:19192679-19192698 | Msa1280560:CDS | 30.0% |
| ! | TAACATCTAACGTTGCTATT+GGG | + | chr8_3:19193378-19193397 | Msa1280560:intron | 30.0% |
| ! | ACTTACTTTCAATATTGGCT+AGG | - | chr8_3:19193532-19193551 | None:intergenic | 30.0% |
| ACATTAGATACGATATGTGT+CGG | - | chr8_3:19193722-19193741 | None:intergenic | 30.0% | |
| TAATGAAAATTGCTGAGGAT+TGG | + | chr8_3:19194291-19194310 | Msa1280560:CDS | 30.0% | |
| AGATGCTTATATCAAGGAAA+TGG | + | chr8_3:19194361-19194380 | Msa1280560:CDS | 30.0% | |
| CTTATATCAAGGAAATGGAT+AGG | + | chr8_3:19194366-19194385 | Msa1280560:CDS | 30.0% | |
| !! | TTTCACCCCTAAAAGTATTT+CGG | + | chr8_3:19194479-19194498 | Msa1280560:exon | 30.0% |
| ! | TACATCCGAAATACTTTTAG+GGG | - | chr8_3:19194487-19194506 | None:intergenic | 30.0% |
| ! | GTACATCCGAAATACTTTTA+GGG | - | chr8_3:19194488-19194507 | None:intergenic | 30.0% |
| ! | TGTACATCCGAAATACTTTT+AGG | - | chr8_3:19194489-19194508 | None:intergenic | 30.0% |
| GTATTTCGGATGTACATATT+TGG | + | chr8_3:19194493-19194512 | Msa1280560:three_prime_UTR | 30.0% | |
| ! | TTTCGCCTCCCATTTTAAAT+TGG | + | chr8_3:19191921-19191940 | Msa1280560:five_prime_UTR | 35.0% |
| ACTTATAAGTGGTGAATTGC+GGG | + | chr8_3:19192056-19192075 | Msa1280560:five_prime_UTR | 35.0% | |
| GACATTCCTCTTTGTGAAAA+TGG | + | chr8_3:19192104-19192123 | Msa1280560:exon | 35.0% | |
| ATTCCTCTTTGTGAAAATGG+AGG | + | chr8_3:19192107-19192126 | Msa1280560:exon | 35.0% | |
| ACAAAGAAGATTCAACACCA+TGG | + | chr8_3:19192134-19192153 | Msa1280560:CDS | 35.0% | |
| ! | CATGAGTTTGAGTTTGAGTT+TGG | - | chr8_3:19192201-19192220 | None:intergenic | 35.0% |
| TCAAACTCATGTTCTTCAAG+TGG | + | chr8_3:19192210-19192229 | Msa1280560:CDS | 35.0% | |
| !! | ATGATGGATTTGAATGGAGT+TGG | - | chr8_3:19192271-19192290 | None:intergenic | 35.0% |
| !! | TAATCAAAAGGTGATAACGG+CGG | - | chr8_3:19192570-19192589 | None:intergenic | 35.0% |
| ACAAAACGCCGATAATCAAA+AGG | - | chr8_3:19192582-19192601 | None:intergenic | 35.0% | |
| !!! | TTCATCTTTTTTTGTCGGCA+AGG | + | chr8_3:19192746-19192765 | Msa1280560:CDS | 35.0% |
| !!! | TTTTTTTGTCGGCAAGGATT+CGG | + | chr8_3:19192752-19192771 | Msa1280560:CDS | 35.0% |
| GTAACATCTAACGTTGCTAT+TGG | + | chr8_3:19193377-19193396 | Msa1280560:intron | 35.0% | |
| AACCTGTATGTAATCTTGAC+AGG | + | chr8_3:19193421-19193440 | Msa1280560:intron | 35.0% | |
| ATCCTGTCAAGATTACATAC+AGG | - | chr8_3:19193426-19193445 | None:intergenic | 35.0% | |
| ! | TTTCAATATTGGCTAGGCTT+TGG | - | chr8_3:19193526-19193545 | None:intergenic | 35.0% |
| !!! | TTTTCTTTGAAGCACGGATA+CGG | - | chr8_3:19193751-19193770 | None:intergenic | 35.0% |
| CAATGAGAGACATTCATCTA+AGG | - | chr8_3:19194027-19194046 | None:intergenic | 35.0% | |
| CTTAGATGAATGTCTCTCAT+TGG | + | chr8_3:19194025-19194044 | Msa1280560:CDS | 35.0% | |
| AGAACATAAAGACGACGATA+AGG | + | chr8_3:19194070-19194089 | Msa1280560:CDS | 35.0% | |
| TGAAGAAGAAGTTTGGATTG+AGG | + | chr8_3:19194112-19194131 | Msa1280560:CDS | 35.0% | |
| !! | CAATTTTGATACAGTTCTGC+TGG | + | chr8_3:19194199-19194218 | Msa1280560:CDS | 35.0% |
| ! | AGTTCTGCTGGAATTTTTCA+AGG | + | chr8_3:19194211-19194230 | Msa1280560:CDS | 35.0% |
| !!! | TTTTTCAAGGAAGAGCTAAG+TGG | + | chr8_3:19194224-19194243 | Msa1280560:CDS | 35.0% |
| GTGGTAATAGAAACCAAAAG+AGG | + | chr8_3:19194243-19194262 | Msa1280560:CDS | 35.0% | |
| GGAGATAATGAAAATTGCTG+AGG | + | chr8_3:19194286-19194305 | Msa1280560:CDS | 35.0% | |
| ! | GGTGACCAATTTAAAATGGG+AGG | - | chr8_3:19191929-19191948 | None:intergenic | 40.0% |
| GAGAAGACCAAGAATGTTGA+AGG | + | chr8_3:19192158-19192177 | Msa1280560:CDS | 40.0% | |
| AGAACAAGCCAAAGATGCAA+AGG | + | chr8_3:19192444-19192463 | Msa1280560:CDS | 40.0% | |
| CTCTTTCACCTTTGCATCTT+TGG | - | chr8_3:19192455-19192474 | None:intergenic | 40.0% | |
| !! | GTCTTTGATTTTCACCGTAC+TGG | - | chr8_3:19192493-19192512 | None:intergenic | 40.0% |
| ! | TGATTATCGGCGTTTTGTGA+TGG | + | chr8_3:19192584-19192603 | Msa1280560:CDS | 40.0% |
| !! | TTTTGTGATGGAATCGTCGA+CGG | + | chr8_3:19192596-19192615 | Msa1280560:CDS | 40.0% |
| TGTTGTGGTAGTAGTAGTGA+CGG | + | chr8_3:19192636-19192655 | Msa1280560:CDS | 40.0% | |
| !!! | TTATTTTTTCTGTCGGTGGG+AGG | + | chr8_3:19193095-19193114 | Msa1280560:intron | 40.0% |
| ! | CATTGTTAGTTTGGTGGCAA+AGG | - | chr8_3:19193341-19193360 | None:intergenic | 40.0% |
| ACAGTCCAGTTTCAGTTCTT+CGG | + | chr8_3:19193471-19193490 | Msa1280560:CDS | 40.0% | |
| GCACGAACACTTCTCAAATT+AGG | + | chr8_3:19193651-19193670 | Msa1280560:intron | 40.0% | |
| AATTAGGCATGTCCCAGTAT+AGG | + | chr8_3:19193667-19193686 | Msa1280560:intron | 40.0% | |
| GAGTCATGCAAAATTTGACC+TGG | + | chr8_3:19193998-19194017 | Msa1280560:CDS | 40.0% | |
| ! | GACATTCATCTAAGGTTACC+AGG | - | chr8_3:19194019-19194038 | None:intergenic | 40.0% |
| TAAAGACGACGATAAGGAAG+AGG | + | chr8_3:19194076-19194095 | Msa1280560:CDS | 40.0% | |
| AACCAAAAGAGGAACGATGA+AGG | + | chr8_3:19194254-19194273 | Msa1280560:CDS | 40.0% | |
| ! | ATCCTTCATCGTTCCTCTTT+TGG | - | chr8_3:19194259-19194278 | None:intergenic | 40.0% |
| GAACGATGAAGGATTTGAGT+TGG | + | chr8_3:19194265-19194284 | Msa1280560:CDS | 40.0% | |
| AAGGAAATGGATAGGAGAGA+TGG | + | chr8_3:19194374-19194393 | Msa1280560:CDS | 40.0% | |
| AGGAAATGGATAGGAGAGAT+GGG | + | chr8_3:19194375-19194394 | Msa1280560:CDS | 40.0% | |
| TGAGATGGTTATGGAGATTG+AGG | + | chr8_3:19194424-19194443 | Msa1280560:CDS | 40.0% | |
| !! | AACGCAGTTTTTGTGCTGTT+TGG | + | chr8_3:19194523-19194542 | Msa1280560:three_prime_UTR | 40.0% |
| ! | GCACCTCCATTTTCACAAAG+AGG | - | chr8_3:19192113-19192132 | None:intergenic | 45.0% |
| ! | CATTCTTGGTCTTCTCTCCA+TGG | - | chr8_3:19192154-19192173 | None:intergenic | 45.0% |
| ! | ATAAGGTTCGTGGTAGTGAG+AGG | - | chr8_3:19192398-19192417 | None:intergenic | 45.0% |
| AACTTGCGTGATAAGGTTCG+TGG | - | chr8_3:19192408-19192427 | None:intergenic | 45.0% | |
| !! | ACTACTGCAACGACTTGTTG+TGG | + | chr8_3:19192621-19192640 | Msa1280560:CDS | 45.0% |
| GTAGTGACGGTGATTCTAGT+TGG | + | chr8_3:19192649-19192668 | Msa1280560:CDS | 45.0% | |
| ! | GGTGATTCTAGTTGGAGTGA+CGG | + | chr8_3:19192657-19192676 | Msa1280560:CDS | 45.0% |
| ATTCGGTAGCATCGTTCGTT+GGG | + | chr8_3:19192769-19192788 | Msa1280560:CDS | 45.0% | |
| ! | CTGGACTGTGTTGTTCATCT+TGG | - | chr8_3:19193460-19193479 | None:intergenic | 45.0% |
| CAGTCCAGTTTCAGTTCTTC+GGG | + | chr8_3:19193472-19193491 | Msa1280560:CDS | 45.0% | |
| AAATGGATAGGAGAGATGGG+TGG | + | chr8_3:19194378-19194397 | Msa1280560:CDS | 45.0% | |
| TGATGAGGAGCTAGATGAGA+TGG | + | chr8_3:19194409-19194428 | Msa1280560:CDS | 45.0% | |
| GGAGCTAGATGAGATGGTTA+TGG | + | chr8_3:19194415-19194434 | Msa1280560:CDS | 45.0% | |
| !! | TATTTAATTAAATTAAGTAT+AGG | + | chr8_3:19192939-19192958 | Msa1280560:intron | 5.0% |
| !! | AAAGGTGATAACGGCGGTGA+TGG | - | chr8_3:19192564-19192583 | None:intergenic | 50.0% |
| AACGACGACGTTGAAGAGAG+TGG | + | chr8_3:19192711-19192730 | Msa1280560:CDS | 50.0% | |
| ACGACGACGTTGAAGAGAGT+GGG | + | chr8_3:19192712-19192731 | Msa1280560:CDS | 50.0% | |
| ! | GATTCGGTAGCATCGTTCGT+TGG | + | chr8_3:19192768-19192787 | Msa1280560:CDS | 50.0% |
| TTCGGTAGCATCGTTCGTTG+GGG | + | chr8_3:19192770-19192789 | Msa1280560:CDS | 50.0% | |
| GCAACCCGAAGAACTGAAAC+TGG | - | chr8_3:19193479-19193498 | None:intergenic | 50.0% | |
| CACGACACGTGTCCTATACT+GGG | - | chr8_3:19193682-19193701 | None:intergenic | 50.0% | |
| ACACGACACGTGTCCTATAC+TGG | - | chr8_3:19193683-19193702 | None:intergenic | 50.0% | |
| AGACGACGATAAGGAAGAGG+AGG | + | chr8_3:19194079-19194098 | Msa1280560:CDS | 50.0% | |
| ATAGGAGAGATGGGTGGAGT+AGG | + | chr8_3:19194384-19194403 | Msa1280560:CDS | 50.0% | |
| TGGGTGGAGTAGGTTTGATG+AGG | + | chr8_3:19194394-19194413 | Msa1280560:CDS | 50.0% | |
| !! | GGTAGTGAGAGGATGGTGGA+GGG | - | chr8_3:19192387-19192406 | None:intergenic | 55.0% |
| ! | TGGTAGTGAGAGGATGGTGG+AGG | - | chr8_3:19192388-19192407 | None:intergenic | 55.0% |
| ! | TCGTGGTAGTGAGAGGATGG+TGG | - | chr8_3:19192391-19192410 | None:intergenic | 55.0% |
| ! | GGTTCGTGGTAGTGAGAGGA+TGG | - | chr8_3:19192394-19192413 | None:intergenic | 55.0% |
| !! | GGCGGTGATGGAATCGTCAA+CGG | - | chr8_3:19192552-19192571 | None:intergenic | 55.0% |
| AGCATCGTTCGTTGGGGACA+AGG | + | chr8_3:19192776-19192795 | Msa1280560:CDS | 55.0% | |
| CTCTATACAACTGCCCCAGC+AGG | - | chr8_3:19193127-19193146 | None:intergenic | 55.0% | |
| GTGGGAGGCTGCTGCCTGCT+GGG | + | chr8_3:19193110-19193129 | Msa1280560:intron | 70.0% | |
| TGGGAGGCTGCTGCCTGCTG+GGG | + | chr8_3:19193111-19193130 | Msa1280560:intron | 70.0% | |
| GGTGGGAGGCTGCTGCCTGC+TGG | + | chr8_3:19193109-19193128 | Msa1280560:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 19191881 | 19194584 | 19191881 | ID=Msa1280560;Name=Msa1280560 |
| chr8_3 | mRNA | 19191881 | 19194584 | 19191881 | ID=Msa1280560-mRNA-1;Parent=Msa1280560;Name=Msa1280560-mRNA-1;_AED=0.00;_eAED=0.00;_QI=242|1|1|1|1|1|3|94|436 |
| chr8_3 | exon | 19191881 | 19192797 | 19191881 | ID=Msa1280560-mRNA-1:exon:7156;Parent=Msa1280560-mRNA-1 |
| chr8_3 | exon | 19193443 | 19193545 | 19193443 | ID=Msa1280560-mRNA-1:exon:7157;Parent=Msa1280560-mRNA-1 |
| chr8_3 | exon | 19193958 | 19194584 | 19193958 | ID=Msa1280560-mRNA-1:exon:7158;Parent=Msa1280560-mRNA-1 |
| chr8_3 | five_prime_UTR | 19191881 | 19192122 | 19191881 | ID=Msa1280560-mRNA-1:five_prime_utr;Parent=Msa1280560-mRNA-1 |
| chr8_3 | CDS | 19192123 | 19192797 | 19192123 | ID=Msa1280560-mRNA-1:cds;Parent=Msa1280560-mRNA-1 |
| chr8_3 | CDS | 19193443 | 19193545 | 19193443 | ID=Msa1280560-mRNA-1:cds;Parent=Msa1280560-mRNA-1 |
| chr8_3 | CDS | 19193958 | 19194490 | 19193958 | ID=Msa1280560-mRNA-1:cds;Parent=Msa1280560-mRNA-1 |
| chr8_3 | three_prime_UTR | 19194491 | 19194584 | 19194491 | ID=Msa1280560-mRNA-1:three_prime_utr;Parent=Msa1280560-mRNA-1 |
| Gene Sequence |
| Protein sequence |
