Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364160 | XP_003597557.1 | 99.468 | 188 | 1 | 0 | 1 | 188 | 1 | 188 | 1.20e-133 | 382 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364160 | sp|Q38820|TI232_ARATH | 67.568 | 185 | 57 | 1 | 7 | 188 | 4 | 188 | 2.36e-75 | 227 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364160 | G7IS28 | 99.468 | 188 | 1 | 0 | 1 | 188 | 1 | 188 | 5.72e-134 | 382 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006880 | Msa1364160 | 0.800800 | 1.216208e-48 | -8.615850e-47 |
| Msa0007850 | Msa1364160 | 0.836264 | 1.035962e-56 | -8.615850e-47 |
| Msa0010490 | Msa1364160 | 0.800601 | 1.335383e-48 | -8.615850e-47 |
| Msa0012710 | Msa1364160 | 0.847653 | 1.009348e-59 | -8.615850e-47 |
| Msa0017320 | Msa1364160 | 0.836555 | 8.734812e-57 | -8.615850e-47 |
| Msa0033880 | Msa1364160 | 0.817641 | 2.968343e-52 | -8.615850e-47 |
| Msa0047250 | Msa1364160 | 0.813190 | 2.901919e-51 | -8.615850e-47 |
| Msa0056270 | Msa1364160 | 0.817160 | 3.809285e-52 | -8.615850e-47 |
| Msa0057370 | Msa1364160 | 0.800365 | 1.491583e-48 | -8.615850e-47 |
| Msa0061500 | Msa1364160 | 0.817610 | 3.015293e-52 | -8.615850e-47 |
| Msa0065650 | Msa1364160 | 0.822042 | 2.926728e-53 | -8.615850e-47 |
| Msa0070430 | Msa1364160 | 0.804299 | 2.309497e-49 | -8.615850e-47 |
| Msa0074750 | Msa1364160 | 0.819673 | 1.026246e-52 | -8.615850e-47 |
| Msa0076780 | Msa1364160 | 0.825081 | 5.692723e-54 | -8.615850e-47 |
| Msa0077540 | Msa1364160 | 0.809131 | 2.202336e-50 | -8.615850e-47 |
| Msa0077900 | Msa1364160 | 0.828311 | 9.648193e-55 | -8.615850e-47 |
| Msa0081650 | Msa1364160 | 0.805314 | 1.416918e-49 | -8.615850e-47 |
| Msa0095360 | Msa1364160 | 0.804095 | 2.545999e-49 | -8.615850e-47 |
| Msa0095770 | Msa1364160 | 0.808547 | 2.934913e-50 | -8.615850e-47 |
| Msa0097950 | Msa1364160 | 0.812556 | 3.994506e-51 | -8.615850e-47 |
| Msa0100800 | Msa1364160 | 0.830863 | 2.311357e-55 | -8.615850e-47 |
| Msa0106050 | Msa1364160 | 0.846731 | 1.806383e-59 | -8.615850e-47 |
| Msa0108870 | Msa1364160 | 0.809610 | 1.737547e-50 | -8.615850e-47 |
| Msa0111080 | Msa1364160 | 0.810098 | 1.364626e-50 | -8.615850e-47 |
| Msa0119440 | Msa1364160 | 0.807173 | 5.751435e-50 | -8.615850e-47 |
| Msa1348650 | Msa1364160 | -0.806872 | 6.659923e-50 | -8.615850e-47 |
| Msa1352890 | Msa1364160 | 0.814277 | 1.672428e-51 | -8.615850e-47 |
| Msa1355700 | Msa1364160 | 0.808609 | 2.847118e-50 | -8.615850e-47 |
| Msa1361250 | Msa1364160 | 0.816975 | 4.190319e-52 | -8.615850e-47 |
| Msa1364160 | Msa1381480 | 0.812516 | 4.076374e-51 | -8.615850e-47 |
| Msa1364160 | Msa1382020 | 0.816786 | 4.620674e-52 | -8.615850e-47 |
| Msa1364160 | Msa1385810 | 0.805864 | 1.086724e-49 | -8.615850e-47 |
| Msa1364160 | Msa1391480 | 0.822240 | 2.632942e-53 | -8.615850e-47 |
| Msa1364160 | Msa1398790 | 0.818797 | 1.625062e-52 | -8.615850e-47 |
| Msa1364160 | Msa1405220 | 0.807576 | 4.725253e-50 | -8.615850e-47 |
| Msa1364160 | Msa1409260 | 0.815981 | 6.997364e-52 | -8.615850e-47 |
| Msa1364160 | Msa1416260 | 0.839824 | 1.257877e-57 | -8.615850e-47 |
| Msa1364160 | Msa1421900 | 0.836091 | 1.146162e-56 | -8.615850e-47 |
| Msa1364160 | Msa1422810 | 0.816713 | 4.799418e-52 | -8.615850e-47 |
| Msa1364160 | Msa1433600 | 0.814940 | 1.192391e-51 | -8.615850e-47 |
| Msa1364160 | Msa1436600 | 0.800887 | 1.167173e-48 | -8.615850e-47 |
| Msa1364160 | Msa1458090 | 0.806696 | 7.256494e-50 | -8.615850e-47 |
| Msa1364160 | Msa1458810 | 0.812642 | 3.825892e-51 | -8.615850e-47 |
| Msa1364160 | Msa1459960 | 0.846262 | 2.425009e-59 | -8.615850e-47 |
| Msa1364160 | Msa1462470 | 0.851080 | 1.119874e-60 | -8.615850e-47 |
| Msa1364160 | Msa1463600 | 0.841231 | 5.385688e-58 | -8.615850e-47 |
| Msa0606810 | Msa1364160 | 0.803798 | 2.935726e-49 | -8.615850e-47 |
| Msa0610090 | Msa1364160 | 0.821487 | 3.933032e-53 | -8.615850e-47 |
| Msa0615680 | Msa1364160 | 0.811558 | 6.592518e-51 | -8.615850e-47 |
| Msa0618930 | Msa1364160 | 0.816348 | 5.793957e-52 | -8.615850e-47 |
| Msa0626940 | Msa1364160 | 0.804023 | 2.635052e-49 | -8.615850e-47 |
| Msa0640940 | Msa1364160 | 0.804120 | 2.515462e-49 | -8.615850e-47 |
| Msa0643320 | Msa1364160 | 0.800459 | 1.426946e-48 | -8.615850e-47 |
| Msa0654620 | Msa1364160 | 0.809097 | 2.239587e-50 | -8.615850e-47 |
| Msa0654870 | Msa1364160 | 0.821682 | 3.545201e-53 | -8.615850e-47 |
| Msa0656810 | Msa1364160 | 0.809811 | 1.573576e-50 | -8.615850e-47 |
| Msa0658480 | Msa1364160 | 0.826306 | 2.917158e-54 | -8.615850e-47 |
| Msa0658680 | Msa1364160 | 0.806715 | 7.190862e-50 | -8.615850e-47 |
| Msa0659550 | Msa1364160 | 0.807647 | 4.564838e-50 | -8.615850e-47 |
| Msa0659790 | Msa1364160 | 0.843629 | 1.245965e-58 | -8.615850e-47 |
| Msa0679360 | Msa1364160 | 0.801318 | 9.527513e-49 | -8.615850e-47 |
| Msa0687230 | Msa1364160 | 0.823134 | 1.630703e-53 | -8.615850e-47 |
| Msa0689630 | Msa1364160 | -0.803928 | 2.758592e-49 | -8.615850e-47 |
| Msa0701100 | Msa1364160 | 0.804703 | 1.902313e-49 | -8.615850e-47 |
| Msa0705990 | Msa1364160 | 0.804696 | 1.908224e-49 | -8.615850e-47 |
| Msa0712560 | Msa1364160 | 0.810843 | 9.420250e-51 | -8.615850e-47 |
| Msa0743530 | Msa1364160 | 0.841466 | 4.672150e-58 | -8.615850e-47 |
| Msa0744100 | Msa1364160 | 0.827210 | 1.774126e-54 | -8.615850e-47 |
| Msa0744180 | Msa1364160 | 0.816978 | 4.183818e-52 | -8.615850e-47 |
| Msa0746170 | Msa1364160 | 0.814995 | 1.159856e-51 | -8.615850e-47 |
| Msa0746210 | Msa1364160 | 0.810774 | 9.751038e-51 | -8.615850e-47 |
| Msa0748660 | Msa1364160 | 0.801180 | 1.016882e-48 | -8.615850e-47 |
| Msa0764920 | Msa1364160 | 0.802697 | 4.960329e-49 | -8.615850e-47 |
| Msa0766670 | Msa1364160 | 0.821031 | 5.011561e-53 | -8.615850e-47 |
| Msa0775560 | Msa1364160 | 0.810037 | 1.406659e-50 | -8.615850e-47 |
| Msa0786070 | Msa1364160 | 0.809339 | 1.986763e-50 | -8.615850e-47 |
| Msa0788120 | Msa1364160 | 0.809714 | 1.650979e-50 | -8.615850e-47 |
| Msa0789560 | Msa1364160 | 0.817330 | 3.486674e-52 | -8.615850e-47 |
| Msa0798290 | Msa1364160 | 0.804982 | 1.663167e-49 | -8.615850e-47 |
| Msa0818770 | Msa1364160 | 0.825710 | 4.040831e-54 | -8.615850e-47 |
| Msa0822170 | Msa1364160 | 0.842045 | 3.285611e-58 | -8.615850e-47 |
| Msa0825270 | Msa1364160 | 0.835693 | 1.446784e-56 | -8.615850e-47 |
| Msa0826150 | Msa1364160 | 0.805933 | 1.050891e-49 | -8.615850e-47 |
| Msa0839450 | Msa1364160 | 0.818739 | 1.675039e-52 | -8.615850e-47 |
| Msa0126880 | Msa1364160 | 0.848882 | 4.618164e-60 | -8.615850e-47 |
| Msa0127040 | Msa1364160 | 0.813380 | 2.635853e-51 | -8.615850e-47 |
| Msa0127850 | Msa1364160 | 0.815864 | 7.431401e-52 | -8.615850e-47 |
| Msa0142110 | Msa1364160 | 0.812738 | 3.645754e-51 | -8.615850e-47 |
| Msa0142410 | Msa1364160 | 0.825953 | 3.538127e-54 | -8.615850e-47 |
| Msa0142500 | Msa1364160 | 0.845355 | 4.276879e-59 | -8.615850e-47 |
| Msa0145110 | Msa1364160 | 0.812472 | 4.167817e-51 | -8.615850e-47 |
| Msa0146080 | Msa1364160 | 0.829612 | 4.670279e-55 | -8.615850e-47 |
| Msa0152560 | Msa1364160 | 0.830020 | 3.714470e-55 | -8.615850e-47 |
| Msa0166750 | Msa1364160 | 0.810183 | 1.308009e-50 | -8.615850e-47 |
| Msa0171980 | Msa1364160 | 0.843170 | 1.652044e-58 | -8.615850e-47 |
| Msa0174000 | Msa1364160 | 0.837274 | 5.724273e-57 | -8.615850e-47 |
| Msa0187490 | Msa1364160 | 0.800722 | 1.261068e-48 | -8.615850e-47 |
| Msa0192640 | Msa1364160 | 0.801385 | 9.231196e-49 | -8.615850e-47 |
| Msa0193600 | Msa1364160 | 0.823866 | 1.099607e-53 | -8.615850e-47 |
| Msa0197530 | Msa1364160 | 0.808857 | 2.520702e-50 | -8.615850e-47 |
| Msa0198520 | Msa1364160 | 0.804062 | 2.586762e-49 | -8.615850e-47 |
| Msa0202930 | Msa1364160 | 0.830632 | 2.632630e-55 | -8.615850e-47 |
| Msa0208000 | Msa1364160 | 0.819160 | 1.343493e-52 | -8.615850e-47 |
| Msa0229360 | Msa1364160 | 0.837031 | 6.605077e-57 | -8.615850e-47 |
| Msa0233370 | Msa1364160 | 0.802482 | 5.494472e-49 | -8.615850e-47 |
| Msa0236070 | Msa1364160 | 0.810516 | 1.109030e-50 | -8.615850e-47 |
| Msa0238030 | Msa1364160 | 0.820275 | 7.474841e-53 | -8.615850e-47 |
| Msa1226610 | Msa1364160 | 0.820369 | 7.115413e-53 | -8.615850e-47 |
| Msa1242640 | Msa1364160 | 0.804813 | 1.803852e-49 | -8.615850e-47 |
| Msa1250110 | Msa1364160 | 0.839718 | 1.339697e-57 | -8.615850e-47 |
| Msa1250730 | Msa1364160 | 0.835957 | 1.239778e-56 | -8.615850e-47 |
| Msa1257070 | Msa1364160 | 0.817030 | 4.074569e-52 | -8.615850e-47 |
| Msa1276970 | Msa1364160 | 0.803015 | 4.265362e-49 | -8.615850e-47 |
| Msa1285200 | Msa1364160 | 0.800354 | 1.499349e-48 | -8.615850e-47 |
| Msa1296300 | Msa1364160 | 0.805135 | 1.544772e-49 | -8.615850e-47 |
| Msa1299700 | Msa1364160 | 0.815924 | 7.204160e-52 | -8.615850e-47 |
| Msa1304810 | Msa1364160 | 0.819364 | 1.207619e-52 | -8.615850e-47 |
| Msa1307180 | Msa1364160 | 0.823139 | 1.626295e-53 | -8.615850e-47 |
| Msa1316360 | Msa1364160 | 0.815913 | 7.246238e-52 | -8.615850e-47 |
| Msa1318620 | Msa1364160 | 0.824453 | 8.005726e-54 | -8.615850e-47 |
| Msa1329800 | Msa1364160 | 0.825956 | 3.533255e-54 | -8.615850e-47 |
| Msa1336040 | Msa1364160 | 0.816175 | 6.333067e-52 | -8.615850e-47 |
| Msa1344310 | Msa1364160 | 0.814852 | 1.247294e-51 | -8.615850e-47 |
| Msa0382370 | Msa1364160 | 0.800015 | 1.757407e-48 | -8.615850e-47 |
| Msa0382400 | Msa1364160 | 0.810039 | 1.405467e-50 | -8.615850e-47 |
| Msa0384670 | Msa1364160 | 0.837835 | 4.111616e-57 | -8.615850e-47 |
| Msa0403770 | Msa1364160 | 0.821517 | 3.870803e-53 | -8.615850e-47 |
| Msa0418400 | Msa1364160 | 0.800175 | 1.630205e-48 | -8.615850e-47 |
| Msa0434570 | Msa1364160 | 0.826097 | 3.270777e-54 | -8.615850e-47 |
| Msa0434770 | Msa1364160 | 0.834340 | 3.172161e-56 | -8.615850e-47 |
| Msa0436200 | Msa1364160 | 0.827696 | 1.356386e-54 | -8.615850e-47 |
| Msa0439890 | Msa1364160 | 0.807948 | 3.938791e-50 | -8.615850e-47 |
| Msa0442310 | Msa1364160 | 0.806720 | 7.172535e-50 | -8.615850e-47 |
| Msa0472720 | Msa1364160 | 0.816539 | 5.249897e-52 | -8.615850e-47 |
| Msa0472770 | Msa1364160 | 0.818326 | 2.077622e-52 | -8.615850e-47 |
| Msa0478580 | Msa1364160 | 0.840779 | 7.079019e-58 | -8.615850e-47 |
| Msa0479330 | Msa1364160 | 0.828817 | 7.280097e-55 | -8.615850e-47 |
| Msa0480780 | Msa1364160 | 0.803297 | 3.728934e-49 | -8.615850e-47 |
| Msa1001350 | Msa1364160 | 0.805684 | 1.185255e-49 | -8.615850e-47 |
| Msa1010460 | Msa1364160 | 0.803120 | 4.055812e-49 | -8.615850e-47 |
| Msa1025940 | Msa1364160 | 0.802571 | 5.265920e-49 | -8.615850e-47 |
| Msa1030930 | Msa1364160 | 0.801962 | 7.029418e-49 | -8.615850e-47 |
| Msa1034720 | Msa1364160 | 0.806326 | 8.686466e-50 | -8.615850e-47 |
| Msa1036740 | Msa1364160 | 0.833967 | 3.933530e-56 | -8.615850e-47 |
| Msa1036910 | Msa1364160 | 0.817473 | 3.237928e-52 | -8.615850e-47 |
| Msa1042660 | Msa1364160 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa1070050 | Msa1364160 | 0.801989 | 6.940610e-49 | -8.615850e-47 |
| Msa1070390 | Msa1364160 | 0.848525 | 5.798088e-60 | -8.615850e-47 |
| Msa1089270 | Msa1364160 | 0.995077 | 8.401188e-213 | -8.615850e-47 |
| Msa1093100 | Msa1364160 | 0.838258 | 3.199939e-57 | -8.615850e-47 |
| Msa1095790 | Msa1364160 | 0.811444 | 6.979308e-51 | -8.615850e-47 |
| Msa1096070 | Msa1364160 | 0.802017 | 6.848306e-49 | -8.615850e-47 |
| Msa0239060 | Msa1364160 | 0.812461 | 4.190530e-51 | -8.615850e-47 |
| Msa0244970 | Msa1364160 | 0.811047 | 8.509006e-51 | -8.615850e-47 |
| Msa0244980 | Msa1364160 | 0.812537 | 4.032677e-51 | -8.615850e-47 |
| Msa0247060 | Msa1364160 | 0.829743 | 4.339815e-55 | -8.615850e-47 |
| Msa0262480 | Msa1364160 | 0.845152 | 4.852314e-59 | -8.615850e-47 |
| Msa0265160 | Msa1364160 | 0.834643 | 2.661435e-56 | -8.615850e-47 |
| Msa0273650 | Msa1364160 | 0.824304 | 8.676650e-54 | -8.615850e-47 |
| Msa0274100 | Msa1364160 | 0.820891 | 5.396348e-53 | -8.615850e-47 |
| Msa0283420 | Msa1364160 | 0.804632 | 1.968215e-49 | -8.615850e-47 |
| Msa0284450 | Msa1364160 | 0.807539 | 4.812171e-50 | -8.615850e-47 |
| Msa0300350 | Msa1364160 | 0.846701 | 1.840491e-59 | -8.615850e-47 |
| Msa0313930 | Msa1364160 | 0.804394 | 2.206533e-49 | -8.615850e-47 |
| Msa0316920 | Msa1364160 | 0.809267 | 2.058957e-50 | -8.615850e-47 |
| Msa0321690 | Msa1364160 | 0.813631 | 2.321710e-51 | -8.615850e-47 |
| Msa0322900 | Msa1364160 | 0.821158 | 4.684000e-53 | -8.615850e-47 |
| Msa0324240 | Msa1364160 | 0.819827 | 9.465617e-53 | -8.615850e-47 |
| Msa0358120 | Msa1364160 | 0.809561 | 1.780141e-50 | -8.615850e-47 |
| Msa0363060 | Msa1364160 | 0.818672 | 1.734507e-52 | -8.615850e-47 |
| Msa1122780 | Msa1364160 | 0.800751 | 1.244021e-48 | -8.615850e-47 |
| Msa1125790 | Msa1364160 | -0.816929 | 4.291671e-52 | -8.615850e-47 |
| Msa1127430 | Msa1364160 | 0.820293 | 7.404334e-53 | -8.615850e-47 |
| Msa1127540 | Msa1364160 | 0.822474 | 2.324181e-53 | -8.615850e-47 |
| Msa1136790 | Msa1364160 | 0.808712 | 2.706158e-50 | -8.615850e-47 |
| Msa1158230 | Msa1364160 | 0.808335 | 3.258440e-50 | -8.615850e-47 |
| Msa1158770 | Msa1364160 | 0.800313 | 1.528130e-48 | -8.615850e-47 |
| Msa1162080 | Msa1364160 | 0.817803 | 2.728095e-52 | -8.615850e-47 |
| Msa1163870 | Msa1364160 | 0.818467 | 1.930786e-52 | -8.615850e-47 |
| Msa1164020 | Msa1364160 | 0.823600 | 1.269055e-53 | -8.615850e-47 |
| Msa1165780 | Msa1364160 | 0.806314 | 8.734373e-50 | -8.615850e-47 |
| Msa1166870 | Msa1364160 | 0.801386 | 9.227921e-49 | -8.615850e-47 |
| Msa1176980 | Msa1364160 | 0.820244 | 7.598772e-53 | -8.615850e-47 |
| Msa1188560 | Msa1364160 | 0.837005 | 6.708648e-57 | -8.615850e-47 |
| Msa1197070 | Msa1364160 | 0.846385 | 2.245316e-59 | -8.615850e-47 |
| Msa1201640 | Msa1364160 | 0.813058 | 3.102405e-51 | -8.615850e-47 |
| Msa1205480 | Msa1364160 | 0.831402 | 1.704107e-55 | -8.615850e-47 |
| Msa1205850 | Msa1364160 | 0.817424 | 3.321469e-52 | -8.615850e-47 |
| Msa1206650 | Msa1364160 | 0.829225 | 5.797855e-55 | -8.615850e-47 |
| Msa1207730 | Msa1364160 | 0.848217 | 7.055904e-60 | -8.615850e-47 |
| Msa1209860 | Msa1364160 | 0.804365 | 2.237414e-49 | -8.615850e-47 |
| Msa1211350 | Msa1364160 | 0.814167 | 1.768262e-51 | -8.615850e-47 |
| Msa0491000 | Msa1364160 | 0.802706 | 4.939593e-49 | -8.615850e-47 |
| Msa0511150 | Msa1364160 | 0.819778 | 9.713456e-53 | -8.615850e-47 |
| Msa0514610 | Msa1364160 | 0.818155 | 2.272258e-52 | -8.615850e-47 |
| Msa0524590 | Msa1364160 | 0.819342 | 1.221263e-52 | -8.615850e-47 |
| Msa0534410 | Msa1364160 | 0.803073 | 4.147599e-49 | -8.615850e-47 |
| Msa0545290 | Msa1364160 | 0.800195 | 1.615050e-48 | -8.615850e-47 |
| Msa0547990 | Msa1364160 | 0.807487 | 4.935133e-50 | -8.615850e-47 |
| Msa0550540 | Msa1364160 | 0.826205 | 3.082398e-54 | -8.615850e-47 |
| Msa0550570 | Msa1364160 | 0.842336 | 2.751252e-58 | -8.615850e-47 |
| Msa0561430 | Msa1364160 | 0.818994 | 1.466104e-52 | -8.615850e-47 |
| Msa0569780 | Msa1364160 | 0.823688 | 1.210589e-53 | -8.615850e-47 |
| Msa0582280 | Msa1364160 | 0.828801 | 7.346809e-55 | -8.615850e-47 |
| Msa0583500 | Msa1364160 | 0.817510 | 3.177156e-52 | -8.615850e-47 |
| Msa0600890 | Msa1364160 | 0.802751 | 4.834924e-49 | -8.615850e-47 |
| Msa0602370 | Msa1364160 | 0.809928 | 1.484857e-50 | -8.615850e-47 |
| Msa0844610 | Msa1364160 | 0.811904 | 5.543368e-51 | -8.615850e-47 |
| Msa0858440 | Msa1364160 | 0.804367 | 2.234712e-49 | -8.615850e-47 |
| Msa0859180 | Msa1364160 | 0.817239 | 3.655457e-52 | -8.615850e-47 |
| Msa0864420 | Msa1364160 | 0.810581 | 1.073281e-50 | -8.615850e-47 |
| Msa0870650 | Msa1364160 | 0.822974 | 1.777918e-53 | -8.615850e-47 |
| Msa0879850 | Msa1364160 | 0.805381 | 1.372011e-49 | -8.615850e-47 |
| Msa0882730 | Msa1364160 | 0.846228 | 2.478149e-59 | -8.615850e-47 |
| Msa0883520 | Msa1364160 | 0.803374 | 3.594782e-49 | -8.615850e-47 |
| Msa0901450 | Msa1364160 | 0.803247 | 3.817767e-49 | -8.615850e-47 |
| Msa0903780 | Msa1364160 | 0.800744 | 1.248298e-48 | -8.615850e-47 |
| Msa0921870 | Msa1364160 | 0.804070 | 2.576497e-49 | -8.615850e-47 |
| Msa0925770 | Msa1364160 | 0.801351 | 9.383221e-49 | -8.615850e-47 |
| Msa0945240 | Msa1364160 | 0.800497 | 1.401708e-48 | -8.615850e-47 |
| Msa0947800 | Msa1364160 | 0.845453 | 4.022577e-59 | -8.615850e-47 |
| Msa0970600 | Msa1364160 | 0.810268 | 1.254340e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364160 | MtrunA17_Chr2g0329891 | 99.468 | 188 | 1 | 0 | 1 | 188 | 1 | 188 | 1.10e-137 | 382 |
| Msa1364160 | MtrunA17_Chr8g0343071 | 75.419 | 179 | 44 | 0 | 10 | 188 | 4 | 182 | 1.96e-85 | 249 |
| Msa1364160 | MtrunA17_Chr1g0190881 | 61.749 | 183 | 69 | 1 | 7 | 188 | 3 | 185 | 5.31e-76 | 226 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1364160 | AT1G72750.1 | 67.568 | 185 | 57 | 1 | 7 | 188 | 4 | 188 | 2.40e-76 | 227 |
| Msa1364160 | AT1G17530.1 | 62.366 | 186 | 64 | 2 | 5 | 188 | 6 | 187 | 1.67e-74 | 222 |
| Msa1364160 | AT1G17530.2 | 62.295 | 183 | 63 | 2 | 4 | 184 | 5 | 183 | 3.50e-73 | 219 |
| Msa1364160 | AT3G04800.1 | 52.459 | 183 | 86 | 1 | 7 | 188 | 6 | 188 | 7.84e-51 | 162 |
Find 72 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGGCAGCAGGGCTTGGTACC+GGG | 0.325322 | tig0018106:-241841 | Msa1364160:CDS |
| TTGGGAGCTGGTAGAGGTTT+CGG | 0.328905 | tig0018106:+242173 | None:intergenic |
| TAGGGATTGTAGAGACGTTT+TGG | 0.331643 | tig0018106:+242217 | None:intergenic |
| GTAGCCGCATCCGGTGTAAA+AGG | 0.338122 | tig0018106:+242084 | None:intergenic |
| TTGGTACCGGGGCGTTGTAT+CGG | 0.348837 | tig0018106:-241829 | Msa1364160:CDS |
| ACCTTTCTCGAACGATTTCA+CGG | 0.355472 | tig0018106:+242018 | None:intergenic |
| GTGGCAGCAGGGCTTGGTAC+CGG | 0.372617 | tig0018106:-241842 | Msa1364160:CDS |
| AAGAGATGTTCAGGTGAGGT+TGG | 0.384154 | tig0018106:+242154 | None:intergenic |
| TCCTCGATGAAGAGATGTTC+AGG | 0.386072 | tig0018106:+242145 | None:intergenic |
| GGCTACCTCGGCGGCGCCAT+TGG | 0.387745 | tig0018106:-242067 | Msa1364160:CDS |
| TGGTACCGGGGCGTTGTATC+GGG | 0.396607 | tig0018106:-241828 | Msa1364160:CDS |
| GTGAGATCAGCTGCTGTTGC+CGG | 0.398096 | tig0018106:-241794 | Msa1364160:CDS |
| CGCATCCGGTGTAAAAGGTT+AGG | 0.399415 | tig0018106:+242089 | None:intergenic |
| GCCGCCGAGGTAGCCGCATC+CGG | 0.401744 | tig0018106:+242075 | None:intergenic |
| GGGAACCGCCTTGGTGTGAT+CGG | 0.402790 | tig0018106:-241932 | Msa1364160:CDS |
| TCGGAGTTTGATTCGTGATC+GGG | 0.411466 | tig0018106:+242250 | None:intergenic |
| CACAACACCACCAACAGCAC+CGG | 0.411667 | tig0018106:+241775 | None:intergenic |
| GGCGGCGCCATTGGTGGCGC+CGG | 0.412036 | tig0018106:-242058 | Msa1364160:CDS |
| AACAGTGTGGCAGCAGGGCT+TGG | 0.418069 | tig0018106:-241848 | Msa1364160:CDS |
| GCTGTTGGTGGTGTTGTGGC+TGG | 0.423812 | tig0018106:-241770 | Msa1364160:CDS |
| GGAACCGCCTTGGTGTGATC+GGG | 0.429194 | tig0018106:-241931 | Msa1364160:CDS |
| TACCTCGGCGGCGCCATTGG+TGG | 0.432819 | tig0018106:-242064 | Msa1364160:CDS |
| CGTTGTATCGGGCAGCGAGA+GGG | 0.437956 | tig0018106:-241817 | Msa1364160:CDS |
| GTGAGGTTGGGAGCTGGTAG+AGG | 0.443193 | tig0018106:+242167 | None:intergenic |
| GGATTGGTACTTCGAGGTCT+TGG | 0.447073 | tig0018106:+242194 | None:intergenic |
| CTCAACGCAAACATCGTTCC+TGG | 0.447403 | tig0018106:-242120 | Msa1364160:CDS |
| GTGGCTGGAGTGGCTATCGC+GGG | 0.448335 | tig0018106:-241755 | Msa1364160:CDS |
| AGTGGCTATCGCGGGGAAGC+AGG | 0.450298 | tig0018106:-241747 | Msa1364160:CDS |
| AAAGGTTAGGGTTTCTCCCC+AGG | 0.463183 | tig0018106:+242102 | None:intergenic |
| GCCATTGGTGGCGCCGGCGT+AGG | 0.463542 | tig0018106:-242052 | Msa1364160:CDS |
| GCTGCTGTTGCCGGTGCTGT+TGG | 0.465020 | tig0018106:-241785 | Msa1364160:CDS |
| GCATCCGGTGTAAAAGGTTA+GGG | 0.487745 | tig0018106:+242090 | None:intergenic |
| AACAAGATTCTGAATTCGTC+AGG | 0.489468 | tig0018106:-241974 | Msa1364160:CDS |
| AGAGATGTTCAGGTGAGGTT+GGG | 0.491614 | tig0018106:+242155 | None:intergenic |
| ATCGGAGTTTGATTCGTGAT+CGG | 0.492854 | tig0018106:+242249 | None:intergenic |
| TGGTACTTCGAGGTCTTGGT+AGG | 0.496614 | tig0018106:+242198 | None:intergenic |
| GCCGTGAAATCGTTCGAGAA+AGG | 0.498953 | tig0018106:-242019 | Msa1364160:CDS |
| CGCCACCAATGGCGCCGCCG+AGG | 0.504816 | tig0018106:+242062 | None:intergenic |
| GCTGTTGCCGGTGCTGTTGG+TGG | 0.505954 | tig0018106:-241782 | Msa1364160:CDS |
| GGTTTCGGATTGGTACTTCG+AGG | 0.508805 | tig0018106:+242188 | None:intergenic |
| GTTGTATCGGGCAGCGAGAG+GGG | 0.520290 | tig0018106:-241816 | Msa1364160:CDS |
| ACCTACGCCGGCGCCACCAA+TGG | 0.521262 | tig0018106:+242051 | None:intergenic |
| GCGTTGTATCGGGCAGCGAG+AGG | 0.529365 | tig0018106:-241818 | Msa1364160:CDS |
| TCAACGCAAACATCGTTCCT+GGG | 0.532503 | tig0018106:-242119 | Msa1364160:CDS |
| GGCAGCAGGGCTTGGTACCG+GGG | 0.541292 | tig0018106:-241840 | Msa1364160:CDS |
| TGGAATTGAAAGCGGGATCA+CGG | 0.541386 | tig0018106:-241897 | Msa1364160:CDS |
| CGGTGCTGTTGGTGGTGTTG+TGG | 0.552191 | tig0018106:-241774 | Msa1364160:CDS |
| GATCACGGCGGCGAGAGATA+CGG | 0.553451 | tig0018106:-241882 | Msa1364160:CDS |
| GTGATCGGGTTGTTATTCGC+TGG | 0.562580 | tig0018106:-241917 | Msa1364160:CDS |
| GTTCAGGTGAGGTTGGGAGC+TGG | 0.563872 | tig0018106:+242161 | None:intergenic |
| TGTGGCTGGAGTGGCTATCG+CGG | 0.570123 | tig0018106:-241756 | Msa1364160:CDS |
| TCTGAATTCGTCAGGACACA+CGG | 0.572872 | tig0018106:-241966 | Msa1364160:CDS |
| TGGTGGTGTTGTGGCTGGAG+TGG | 0.577673 | tig0018106:-241765 | Msa1364160:CDS |
| GACACACGGGTCGGACGTGG+GGG | 0.579942 | tig0018106:-241952 | Msa1364160:CDS |
| CGGAGTTTGATTCGTGATCG+GGG | 0.580921 | tig0018106:+242251 | None:intergenic |
| GGTACTTCGAGGTCTTGGTA+GGG | 0.582086 | tig0018106:+242199 | None:intergenic |
| TATTCGCTGGAATTGAAAGC+GGG | 0.588545 | tig0018106:-241904 | Msa1364160:CDS |
| AGCTGGTAGAGGTTTCGGAT+TGG | 0.594257 | tig0018106:+242178 | None:intergenic |
| ACCGGATGCGGCTACCTCGG+CGG | 0.600899 | tig0018106:-242076 | Msa1364160:CDS |
| CTGAATTCGTCAGGACACAC+GGG | 0.613772 | tig0018106:-241965 | Msa1364160:CDS |
| CGCTGCCCGATACAACGCCC+CGG | 0.635857 | tig0018106:+241823 | None:intergenic |
| TTATTCGCTGGAATTGAAAG+CGG | 0.641254 | tig0018106:-241905 | Msa1364160:CDS |
| GGAGTTTGATTCGTGATCGG+GGG | 0.642744 | tig0018106:+242252 | None:intergenic |
| TGGCTGGAGTGGCTATCGCG+GGG | 0.652115 | tig0018106:-241754 | Msa1364160:CDS |
| ATTCGTCAGGACACACGGGT+CGG | 0.661517 | tig0018106:-241961 | Msa1364160:CDS |
| CAACGCAAACATCGTTCCTG+GGG | 0.671475 | tig0018106:-242118 | Msa1364160:CDS |
| GGCTTCGACGAAACCTACGC+CGG | 0.685279 | tig0018106:+242039 | None:intergenic |
| GATGAAGAGATGTTCAGGTG+AGG | 0.693036 | tig0018106:+242150 | None:intergenic |
| ACCTGAACATCTCTTCATCG+AGG | 0.710068 | tig0018106:-242146 | Msa1364160:CDS |
| ATAACAACCCGATCACACCA+AGG | 0.726478 | tig0018106:+241924 | None:intergenic |
| AATTGAAAGCGGGATCACGG+CGG | 0.736385 | tig0018106:-241894 | Msa1364160:CDS |
| ACAACCCGATCACACCAAGG+CGG | 0.775839 | tig0018106:+241927 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AACAAGATTCTGAATTCGTC+AGG | - | tig0018106:242012-242031 | Msa1364160:CDS | 35.0% | |
| TTATTCGCTGGAATTGAAAG+CGG | - | tig0018106:242081-242100 | Msa1364160:CDS | 35.0% | |
| ! | ATCGGAGTTTGATTCGTGAT+CGG | + | tig0018106:241740-241759 | None:intergenic | 40.0% |
| !! | GATTGTAGAGACGTTTTGGA+GGG | + | tig0018106:241768-241787 | None:intergenic | 40.0% |
| ! | TAGGGATTGTAGAGACGTTT+TGG | + | tig0018106:241772-241791 | None:intergenic | 40.0% |
| ! | GAAACCCTAACCTTTTACAC+CGG | - | tig0018106:241892-241911 | Msa1364160:CDS | 40.0% |
| ACCTTTCTCGAACGATTTCA+CGG | + | tig0018106:241971-241990 | None:intergenic | 40.0% | |
| TATTCGCTGGAATTGAAAGC+GGG | - | tig0018106:242082-242101 | Msa1364160:CDS | 40.0% | |
| ! | TCGGAGTTTGATTCGTGATC+GGG | + | tig0018106:241739-241758 | None:intergenic | 45.0% |
| !!! | ACGTTTTGGAGGGTTGGAAT+CGG | + | tig0018106:241758-241777 | None:intergenic | 45.0% |
| ! | GGATTGTAGAGACGTTTTGG+AGG | + | tig0018106:241769-241788 | None:intergenic | 45.0% |
| AGAGATGTTCAGGTGAGGTT+GGG | + | tig0018106:241834-241853 | None:intergenic | 45.0% | |
| AAGAGATGTTCAGGTGAGGT+TGG | + | tig0018106:241835-241854 | None:intergenic | 45.0% | |
| GATGAAGAGATGTTCAGGTG+AGG | + | tig0018106:241839-241858 | None:intergenic | 45.0% | |
| ACCTGAACATCTCTTCATCG+AGG | - | tig0018106:241840-241859 | Msa1364160:CDS | 45.0% | |
| TCCTCGATGAAGAGATGTTC+AGG | + | tig0018106:241844-241863 | None:intergenic | 45.0% | |
| TCAACGCAAACATCGTTCCT+GGG | - | tig0018106:241867-241886 | Msa1364160:CDS | 45.0% | |
| GCATCCGGTGTAAAAGGTTA+GGG | + | tig0018106:241899-241918 | None:intergenic | 45.0% | |
| ! | CTAACCTTTTACACCGGATG+CGG | - | tig0018106:241898-241917 | Msa1364160:CDS | 45.0% |
| TCTGAATTCGTCAGGACACA+CGG | - | tig0018106:242020-242039 | Msa1364160:CDS | 45.0% | |
| ATAACAACCCGATCACACCA+AGG | + | tig0018106:242065-242084 | None:intergenic | 45.0% | |
| TGGAATTGAAAGCGGGATCA+CGG | - | tig0018106:242089-242108 | Msa1364160:CDS | 45.0% | |
| ! | GGACGATGTTTTCAACAGTG+TGG | - | tig0018106:242125-242144 | Msa1364160:CDS | 45.0% |
| ! | TTTTCAACAGTGTGGCAGCA+GGG | - | tig0018106:242133-242152 | Msa1364160:CDS | 45.0% |
| ! | GGAGTTTGATTCGTGATCGG+GGG | + | tig0018106:241737-241756 | None:intergenic | 50.0% |
| ! | CGGAGTTTGATTCGTGATCG+GGG | + | tig0018106:241738-241757 | None:intergenic | 50.0% |
| !!! | GTAGAGACGTTTTGGAGGGT+TGG | + | tig0018106:241764-241783 | None:intergenic | 50.0% |
| GGTACTTCGAGGTCTTGGTA+GGG | + | tig0018106:241790-241809 | None:intergenic | 50.0% | |
| TGGTACTTCGAGGTCTTGGT+AGG | + | tig0018106:241791-241810 | None:intergenic | 50.0% | |
| ! | GGATTGGTACTTCGAGGTCT+TGG | + | tig0018106:241795-241814 | None:intergenic | 50.0% |
| !! | GGTTTCGGATTGGTACTTCG+AGG | + | tig0018106:241801-241820 | None:intergenic | 50.0% |
| AGCTGGTAGAGGTTTCGGAT+TGG | + | tig0018106:241811-241830 | None:intergenic | 50.0% | |
| TTGGGAGCTGGTAGAGGTTT+CGG | + | tig0018106:241816-241835 | None:intergenic | 50.0% | |
| CTCAACGCAAACATCGTTCC+TGG | - | tig0018106:241866-241885 | Msa1364160:CDS | 50.0% | |
| CAACGCAAACATCGTTCCTG+GGG | - | tig0018106:241868-241887 | Msa1364160:CDS | 50.0% | |
| AAAGGTTAGGGTTTCTCCCC+AGG | + | tig0018106:241887-241906 | None:intergenic | 50.0% | |
| CGCATCCGGTGTAAAAGGTT+AGG | + | tig0018106:241900-241919 | None:intergenic | 50.0% | |
| GCCGTGAAATCGTTCGAGAA+AGG | - | tig0018106:241967-241986 | Msa1364160:CDS | 50.0% | |
| CTGAATTCGTCAGGACACAC+GGG | - | tig0018106:242021-242040 | Msa1364160:CDS | 50.0% | |
| ! | GTGATCGGGTTGTTATTCGC+TGG | - | tig0018106:242069-242088 | Msa1364160:CDS | 50.0% |
| AATTGAAAGCGGGATCACGG+CGG | - | tig0018106:242092-242111 | Msa1364160:CDS | 50.0% | |
| ! | GTTTTCAACAGTGTGGCAGC+AGG | - | tig0018106:242132-242151 | Msa1364160:CDS | 50.0% |
| GTAGCCGCATCCGGTGTAAA+AGG | + | tig0018106:241905-241924 | None:intergenic | 55.0% | |
| ATTCGTCAGGACACACGGGT+CGG | - | tig0018106:242025-242044 | Msa1364160:CDS | 55.0% | |
| ACAACCCGATCACACCAAGG+CGG | + | tig0018106:242062-242081 | None:intergenic | 55.0% | |
| !! | TTGGTACCGGGGCGTTGTAT+CGG | - | tig0018106:242157-242176 | Msa1364160:CDS | 55.0% |
| GTGAGATCAGCTGCTGTTGC+CGG | - | tig0018106:242192-242211 | Msa1364160:CDS | 55.0% | |
| CACAACACCACCAACAGCAC+CGG | + | tig0018106:242214-242233 | None:intergenic | 55.0% | |
| GTGAGGTTGGGAGCTGGTAG+AGG | + | tig0018106:241822-241841 | None:intergenic | 60.0% | |
| GTTCAGGTGAGGTTGGGAGC+TGG | + | tig0018106:241828-241847 | None:intergenic | 60.0% | |
| TACACCGGATGCGGCTACCT+CGG | - | tig0018106:241907-241926 | Msa1364160:CDS | 60.0% | |
| GGCTTCGACGAAACCTACGC+CGG | + | tig0018106:241950-241969 | None:intergenic | 60.0% | |
| ! | GGGAACCGCCTTGGTGTGAT+CGG | - | tig0018106:242054-242073 | Msa1364160:CDS | 60.0% |
| ! | GGAACCGCCTTGGTGTGATC+GGG | - | tig0018106:242055-242074 | Msa1364160:CDS | 60.0% |
| GATCACGGCGGCGAGAGATA+CGG | - | tig0018106:242104-242123 | Msa1364160:CDS | 60.0% | |
| AACAGTGTGGCAGCAGGGCT+TGG | - | tig0018106:242138-242157 | Msa1364160:CDS | 60.0% | |
| !! | TGGTACCGGGGCGTTGTATC+GGG | - | tig0018106:242158-242177 | Msa1364160:CDS | 60.0% |
| CGTTGTATCGGGCAGCGAGA+GGG | - | tig0018106:242169-242188 | Msa1364160:CDS | 60.0% | |
| GTTGTATCGGGCAGCGAGAG+GGG | - | tig0018106:242170-242189 | Msa1364160:CDS | 60.0% | |
| !! | CGGTGCTGTTGGTGGTGTTG+TGG | - | tig0018106:242212-242231 | Msa1364160:CDS | 60.0% |
| !! | GCTGTTGGTGGTGTTGTGGC+TGG | - | tig0018106:242216-242235 | Msa1364160:CDS | 60.0% |
| !! | TGGTGGTGTTGTGGCTGGAG+TGG | - | tig0018106:242221-242240 | Msa1364160:CDS | 60.0% |
| TGTGGCTGGAGTGGCTATCG+CGG | - | tig0018106:242230-242249 | Msa1364160:CDS | 60.0% | |
| AGGACACACGGGTCGGACGT+GGG | - | tig0018106:242032-242051 | Msa1364160:CDS | 65.0% | |
| ! | GTGGCAGCAGGGCTTGGTAC+CGG | - | tig0018106:242144-242163 | Msa1364160:CDS | 65.0% |
| ! | TGGCAGCAGGGCTTGGTACC+GGG | - | tig0018106:242145-242164 | Msa1364160:CDS | 65.0% |
| GCGTTGTATCGGGCAGCGAG+AGG | - | tig0018106:242168-242187 | Msa1364160:CDS | 65.0% | |
| !! | GCTGCTGTTGCCGGTGCTGT+TGG | - | tig0018106:242201-242220 | Msa1364160:CDS | 65.0% |
| !! | GCTGTTGCCGGTGCTGTTGG+TGG | - | tig0018106:242204-242223 | Msa1364160:CDS | 65.0% |
| GTGGCTGGAGTGGCTATCGC+GGG | - | tig0018106:242231-242250 | Msa1364160:CDS | 65.0% | |
| TGGCTGGAGTGGCTATCGCG+GGG | - | tig0018106:242232-242251 | Msa1364160:CDS | 65.0% | |
| AGTGGCTATCGCGGGGAAGC+AGG | - | tig0018106:242239-242258 | Msa1364160:CDS | 65.0% | |
| ACCGGATGCGGCTACCTCGG+CGG | - | tig0018106:241910-241929 | Msa1364160:CDS | 70.0% | |
| TACCTCGGCGGCGCCATTGG+TGG | - | tig0018106:241922-241941 | Msa1364160:CDS | 70.0% | |
| ACCTACGCCGGCGCCACCAA+TGG | + | tig0018106:241938-241957 | None:intergenic | 70.0% | |
| CAGGACACACGGGTCGGACG+TGG | - | tig0018106:242031-242050 | Msa1364160:CDS | 70.0% | |
| GGACACACGGGTCGGACGTG+GGG | - | tig0018106:242033-242052 | Msa1364160:CDS | 70.0% | |
| GACACACGGGTCGGACGTGG+GGG | - | tig0018106:242034-242053 | Msa1364160:CDS | 70.0% | |
| ! | GGCAGCAGGGCTTGGTACCG+GGG | - | tig0018106:242146-242165 | Msa1364160:CDS | 70.0% |
| CGCTGCCCGATACAACGCCC+CGG | + | tig0018106:242166-242185 | None:intergenic | 70.0% | |
| GCCGCCGAGGTAGCCGCATC+CGG | + | tig0018106:241914-241933 | None:intergenic | 75.0% | |
| GGCTACCTCGGCGGCGCCAT+TGG | - | tig0018106:241919-241938 | Msa1364160:CDS | 75.0% | |
| !! | GCCATTGGTGGCGCCGGCGT+AGG | - | tig0018106:241934-241953 | Msa1364160:CDS | 75.0% |
| CGGACGTGGGGGAACCGCCT+TGG | - | tig0018106:242045-242064 | Msa1364160:CDS | 75.0% | |
| ! | CGCCACCAATGGCGCCGCCG+AGG | + | tig0018106:241927-241946 | None:intergenic | 80.0% |
| !!! | GGCGGCGCCATTGGTGGCGC+CGG | - | tig0018106:241928-241947 | Msa1364160:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018106 | gene | 241721 | 242287 | 241721 | ID=Msa1364160;Name=Msa1364160 |
| tig0018106 | mRNA | 241721 | 242287 | 241721 | ID=Msa1364160-mRNA-1;Parent=Msa1364160;Name=Msa1364160-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|-1|0|1|-1|1|1|0|188 |
| tig0018106 | exon | 241721 | 242287 | 241721 | ID=Msa1364160-mRNA-1:exon:13853;Parent=Msa1364160-mRNA-1 |
| tig0018106 | CDS | 241721 | 242287 | 241721 | ID=Msa1364160-mRNA-1:cds;Parent=Msa1364160-mRNA-1 |
| Gene Sequence |
| Protein sequence |
