Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366180 | XP_003590835.1 | 82.707 | 133 | 1 | 1 | 19 | 129 | 1 | 133 | 1.43e-66 | 207 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366180 | sp|P55844|RL14_PEA | 75.188 | 133 | 11 | 1 | 19 | 129 | 1 | 133 | 1.89e-63 | 192 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366180 | G7I4V0 | 82.707 | 133 | 1 | 1 | 19 | 129 | 1 | 133 | 6.83e-67 | 207 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000100 | Msa1366180 | 0.815046 | 1.129652e-51 | -8.615850e-47 |
| Msa0002750 | Msa1366180 | 0.918176 | 2.152691e-86 | -8.615850e-47 |
| Msa0002790 | Msa1366180 | 0.920099 | 1.964198e-87 | -8.615850e-47 |
| Msa0003780 | Msa1366180 | 0.856766 | 2.577120e-62 | -8.615850e-47 |
| Msa0019390 | Msa1366180 | 0.814822 | 1.266687e-51 | -8.615850e-47 |
| Msa0022970 | Msa1366180 | 0.873863 | 1.057348e-67 | -8.615850e-47 |
| Msa0027260 | Msa1366180 | 0.803794 | 2.940506e-49 | -8.615850e-47 |
| Msa0040690 | Msa1366180 | 0.824039 | 1.001770e-53 | -8.615850e-47 |
| Msa0042280 | Msa1366180 | 0.825822 | 3.800803e-54 | -8.615850e-47 |
| Msa0043660 | Msa1366180 | 0.834459 | 2.960626e-56 | -8.615850e-47 |
| Msa0044890 | Msa1366180 | 0.810819 | 9.534381e-51 | -8.615850e-47 |
| Msa0045730 | Msa1366180 | 0.851845 | 6.805644e-61 | -8.615850e-47 |
| Msa0047160 | Msa1366180 | 0.854021 | 1.624215e-61 | -8.615850e-47 |
| Msa0048180 | Msa1366180 | 0.826439 | 2.710874e-54 | -8.615850e-47 |
| Msa0055180 | Msa1366180 | 0.804932 | 1.703995e-49 | -8.615850e-47 |
| Msa0068970 | Msa1366180 | 0.807193 | 5.695865e-50 | -8.615850e-47 |
| Msa0074030 | Msa1366180 | 0.845931 | 2.985345e-59 | -8.615850e-47 |
| Msa0079820 | Msa1366180 | 0.835336 | 1.780111e-56 | -8.615850e-47 |
| Msa0086750 | Msa1366180 | 0.838641 | 2.548993e-57 | -8.615850e-47 |
| Msa0091880 | Msa1366180 | 0.803308 | 3.708286e-49 | -8.615850e-47 |
| Msa0094470 | Msa1366180 | 0.845803 | 3.232660e-59 | -8.615850e-47 |
| Msa0097580 | Msa1366180 | 0.828559 | 8.405406e-55 | -8.615850e-47 |
| Msa0097600 | Msa1366180 | 0.832798 | 7.694714e-56 | -8.615850e-47 |
| Msa0116130 | Msa1366180 | 0.840938 | 6.430659e-58 | -8.615850e-47 |
| Msa0116670 | Msa1366180 | 0.853378 | 2.486555e-61 | -8.615850e-47 |
| Msa0118710 | Msa1366180 | 0.866689 | 2.372788e-65 | -8.615850e-47 |
| Msa1349570 | Msa1366180 | 0.870775 | 1.131130e-66 | -8.615850e-47 |
| Msa1356790 | Msa1366180 | 0.873532 | 1.367447e-67 | -8.615850e-47 |
| Msa1362790 | Msa1366180 | 0.843453 | 1.388087e-58 | -8.615850e-47 |
| Msa1363330 | Msa1366180 | 0.877716 | 5.028764e-69 | -8.615850e-47 |
| Msa1366180 | Msa1369190 | 0.840636 | 7.717845e-58 | -8.615850e-47 |
| Msa1366180 | Msa1374120 | 0.847714 | 9.709701e-60 | -8.615850e-47 |
| Msa1366180 | Msa1379760 | 0.841407 | 4.842890e-58 | -8.615850e-47 |
| Msa1366180 | Msa1386600 | 0.877567 | 5.666450e-69 | -8.615850e-47 |
| Msa1366180 | Msa1387410 | 0.938891 | 3.172968e-99 | -8.615850e-47 |
| Msa1366180 | Msa1394290 | 0.840734 | 7.275922e-58 | -8.615850e-47 |
| Msa1366180 | Msa1399530 | 0.860782 | 1.624445e-63 | -8.615850e-47 |
| Msa1366180 | Msa1407070 | 0.823934 | 1.059964e-53 | -8.615850e-47 |
| Msa1366180 | Msa1413500 | 0.897641 | 1.154124e-76 | -8.615850e-47 |
| Msa1366180 | Msa1418690 | 0.824757 | 6.789741e-54 | -8.615850e-47 |
| Msa1366180 | Msa1426120 | 0.820677 | 6.044056e-53 | -8.615850e-47 |
| Msa1366180 | Msa1426370 | 0.845608 | 3.651923e-59 | -8.615850e-47 |
| Msa1366180 | Msa1426490 | 0.873222 | 1.738197e-67 | -8.615850e-47 |
| Msa1366180 | Msa1427560 | 0.852150 | 5.575867e-61 | -8.615850e-47 |
| Msa1366180 | Msa1432700 | 0.842307 | 2.801430e-58 | -8.615850e-47 |
| Msa1366180 | Msa1433310 | 0.844688 | 6.476693e-59 | -8.615850e-47 |
| Msa1366180 | Msa1448690 | 0.868531 | 6.094421e-66 | -8.615850e-47 |
| Msa1366180 | Msa1450280 | 0.834070 | 3.705928e-56 | -8.615850e-47 |
| Msa1366180 | Msa1456050 | 0.839239 | 1.784503e-57 | -8.615850e-47 |
| Msa1366180 | Msa1457920 | 0.804728 | 1.879005e-49 | -8.615850e-47 |
| Msa0603320 | Msa1366180 | 0.867970 | 9.236551e-66 | -8.615850e-47 |
| Msa0612390 | Msa1366180 | 0.856625 | 2.835484e-62 | -8.615850e-47 |
| Msa0615440 | Msa1366180 | 0.831613 | 1.511442e-55 | -8.615850e-47 |
| Msa0620890 | Msa1366180 | 0.826292 | 2.939044e-54 | -8.615850e-47 |
| Msa0621950 | Msa1366180 | 0.820378 | 7.081712e-53 | -8.615850e-47 |
| Msa0622750 | Msa1366180 | 0.844606 | 6.813981e-59 | -8.615850e-47 |
| Msa0623200 | Msa1366180 | 0.857324 | 1.764332e-62 | -8.615850e-47 |
| Msa0644350 | Msa1366180 | 0.836818 | 7.487781e-57 | -8.615850e-47 |
| Msa0666230 | Msa1366180 | 0.826671 | 2.386971e-54 | -8.615850e-47 |
| Msa0688850 | Msa1366180 | 0.816821 | 4.538147e-52 | -8.615850e-47 |
| Msa0698490 | Msa1366180 | 0.833164 | 6.242659e-56 | -8.615850e-47 |
| Msa0698660 | Msa1366180 | 0.834672 | 2.617169e-56 | -8.615850e-47 |
| Msa0698780 | Msa1366180 | 0.814628 | 1.398412e-51 | -8.615850e-47 |
| Msa0709730 | Msa1366180 | 0.817200 | 3.729493e-52 | -8.615850e-47 |
| Msa0712610 | Msa1366180 | 0.853132 | 2.924130e-61 | -8.615850e-47 |
| Msa0715650 | Msa1366180 | 0.804399 | 2.201029e-49 | -8.615850e-47 |
| Msa0719420 | Msa1366180 | 0.846063 | 2.747252e-59 | -8.615850e-47 |
| Msa0729200 | Msa1366180 | 0.874043 | 9.190841e-68 | -8.615850e-47 |
| Msa0738100 | Msa1366180 | 0.867739 | 1.095643e-65 | -8.615850e-47 |
| Msa0753140 | Msa1366180 | 0.829914 | 3.943381e-55 | -8.615850e-47 |
| Msa0769590 | Msa1366180 | 0.879168 | 1.553255e-69 | -8.615850e-47 |
| Msa0780490 | Msa1366180 | 0.845302 | 4.419964e-59 | -8.615850e-47 |
| Msa0785130 | Msa1366180 | 0.845433 | 4.073448e-59 | -8.615850e-47 |
| Msa0789680 | Msa1366180 | 0.845984 | 2.887205e-59 | -8.615850e-47 |
| Msa0792420 | Msa1366180 | 0.811565 | 6.569648e-51 | -8.615850e-47 |
| Msa0798440 | Msa1366180 | 0.805400 | 1.359424e-49 | -8.615850e-47 |
| Msa0802410 | Msa1366180 | 0.835633 | 1.497758e-56 | -8.615850e-47 |
| Msa0806880 | Msa1366180 | 0.889290 | 2.765171e-73 | -8.615850e-47 |
| Msa0817540 | Msa1366180 | 0.861605 | 9.125587e-64 | -8.615850e-47 |
| Msa0127310 | Msa1366180 | 0.803594 | 3.235755e-49 | -8.615850e-47 |
| Msa0127390 | Msa1366180 | 0.807384 | 5.188563e-50 | -8.615850e-47 |
| Msa0128860 | Msa1366180 | 0.832603 | 8.604724e-56 | -8.615850e-47 |
| Msa0133540 | Msa1366180 | 0.884666 | 1.577316e-71 | -8.615850e-47 |
| Msa0137550 | Msa1366180 | 0.830934 | 2.220342e-55 | -8.615850e-47 |
| Msa0146340 | Msa1366180 | 0.875102 | 4.013389e-68 | -8.615850e-47 |
| Msa0163760 | Msa1366180 | 0.841376 | 4.932441e-58 | -8.615850e-47 |
| Msa0165660 | Msa1366180 | 0.807059 | 6.079887e-50 | -8.615850e-47 |
| Msa0167480 | Msa1366180 | 0.822087 | 2.858091e-53 | -8.615850e-47 |
| Msa0172970 | Msa1366180 | 0.802265 | 6.089281e-49 | -8.615850e-47 |
| Msa0173530 | Msa1366180 | 0.850854 | 1.297237e-60 | -8.615850e-47 |
| Msa0174730 | Msa1366180 | 0.831728 | 1.416242e-55 | -8.615850e-47 |
| Msa0181490 | Msa1366180 | 0.874358 | 7.189967e-68 | -8.615850e-47 |
| Msa0183090 | Msa1366180 | 0.805131 | 1.548230e-49 | -8.615850e-47 |
| Msa0187930 | Msa1366180 | 0.863148 | 3.061053e-64 | -8.615850e-47 |
| Msa0189300 | Msa1366180 | 0.809585 | 1.759687e-50 | -8.615850e-47 |
| Msa0189700 | Msa1366180 | 0.818718 | 1.693891e-52 | -8.615850e-47 |
| Msa0194540 | Msa1366180 | 0.850634 | 1.495864e-60 | -8.615850e-47 |
| Msa0202020 | Msa1366180 | 0.806818 | 6.837805e-50 | -8.615850e-47 |
| Msa0210330 | Msa1366180 | 0.826541 | 2.563777e-54 | -8.615850e-47 |
| Msa0210360 | Msa1366180 | 0.814304 | 1.649019e-51 | -8.615850e-47 |
| Msa0218830 | Msa1366180 | 0.821119 | 4.782045e-53 | -8.615850e-47 |
| Msa0219120 | Msa1366180 | 0.812932 | 3.306044e-51 | -8.615850e-47 |
| Msa0220720 | Msa1366180 | 0.808589 | 2.875613e-50 | -8.615850e-47 |
| Msa0221030 | Msa1366180 | 0.859994 | 2.813791e-63 | -8.615850e-47 |
| Msa0224560 | Msa1366180 | 0.810369 | 1.193102e-50 | -8.615850e-47 |
| Msa0231100 | Msa1366180 | 0.828039 | 1.122015e-54 | -8.615850e-47 |
| Msa0231660 | Msa1366180 | 0.829831 | 4.130579e-55 | -8.615850e-47 |
| Msa0232010 | Msa1366180 | 0.817539 | 3.129761e-52 | -8.615850e-47 |
| Msa0232080 | Msa1366180 | 0.820797 | 5.673179e-53 | -8.615850e-47 |
| Msa1257510 | Msa1366180 | 0.852658 | 3.994209e-61 | -8.615850e-47 |
| Msa1260530 | Msa1366180 | 0.854780 | 9.799697e-62 | -8.615850e-47 |
| Msa1265630 | Msa1366180 | 0.853097 | 2.991885e-61 | -8.615850e-47 |
| Msa1299590 | Msa1366180 | 0.801164 | 1.024293e-48 | -8.615850e-47 |
| Msa1305050 | Msa1366180 | 0.839924 | 1.184105e-57 | -8.615850e-47 |
| Msa1331710 | Msa1366180 | 0.854344 | 1.310525e-61 | -8.615850e-47 |
| Msa1338190 | Msa1366180 | 0.831462 | 1.646710e-55 | -8.615850e-47 |
| Msa1343260 | Msa1366180 | 0.831465 | 1.644360e-55 | -8.615850e-47 |
| Msa0395890 | Msa1366180 | 0.800541 | 1.373334e-48 | -8.615850e-47 |
| Msa0440610 | Msa1366180 | 0.824595 | 7.414655e-54 | -8.615850e-47 |
| Msa0443390 | Msa1366180 | 0.831685 | 1.451097e-55 | -8.615850e-47 |
| Msa0481850 | Msa1366180 | 0.834823 | 2.397758e-56 | -8.615850e-47 |
| Msa0989540 | Msa1366180 | 0.830461 | 2.899068e-55 | -8.615850e-47 |
| Msa1006840 | Msa1366180 | 0.851296 | 9.734756e-61 | -8.615850e-47 |
| Msa1010310 | Msa1366180 | 0.806280 | 8.879669e-50 | -8.615850e-47 |
| Msa1013400 | Msa1366180 | 0.802703 | 4.946969e-49 | -8.615850e-47 |
| Msa1019240 | Msa1366180 | 0.857267 | 1.833697e-62 | -8.615850e-47 |
| Msa1019260 | Msa1366180 | 0.851567 | 8.161036e-61 | -8.615850e-47 |
| Msa1039520 | Msa1366180 | 0.813952 | 1.972712e-51 | -8.615850e-47 |
| Msa1043690 | Msa1366180 | 0.858467 | 8.074242e-63 | -8.615850e-47 |
| Msa1072710 | Msa1366180 | 0.867862 | 1.001039e-65 | -8.615850e-47 |
| Msa1078870 | Msa1366180 | 0.819192 | 1.321132e-52 | -8.615850e-47 |
| Msa1080350 | Msa1366180 | 0.848892 | 4.588516e-60 | -8.615850e-47 |
| Msa1081150 | Msa1366180 | 0.808276 | 3.352839e-50 | -8.615850e-47 |
| Msa1088490 | Msa1366180 | 0.986041 | 1.751464e-165 | -8.615850e-47 |
| Msa1100710 | Msa1366180 | 0.800654 | 1.302021e-48 | -8.615850e-47 |
| Msa1104140 | Msa1366180 | 0.865251 | 6.763595e-65 | -8.615850e-47 |
| Msa1104210 | Msa1366180 | 0.843957 | 1.017738e-58 | -8.615850e-47 |
| Msa0243140 | Msa1366180 | 0.804311 | 2.296298e-49 | -8.615850e-47 |
| Msa0244780 | Msa1366180 | 0.871673 | 5.711814e-67 | -8.615850e-47 |
| Msa0250820 | Msa1366180 | 0.841193 | 5.512685e-58 | -8.615850e-47 |
| Msa0257450 | Msa1366180 | 0.834776 | 2.465194e-56 | -8.615850e-47 |
| Msa0258850 | Msa1366180 | 0.818985 | 1.473080e-52 | -8.615850e-47 |
| Msa0262480 | Msa1366180 | 0.814385 | 1.582744e-51 | -8.615850e-47 |
| Msa0264010 | Msa1366180 | 0.845967 | 2.917875e-59 | -8.615850e-47 |
| Msa0268130 | Msa1366180 | 0.855274 | 7.041461e-62 | -8.615850e-47 |
| Msa0269180 | Msa1366180 | 0.903497 | 3.264819e-79 | -8.615850e-47 |
| Msa0283390 | Msa1366180 | 0.838905 | 2.177641e-57 | -8.615850e-47 |
| Msa0289580 | Msa1366180 | 0.915211 | 7.706786e-85 | -8.615850e-47 |
| Msa0289610 | Msa1366180 | 0.920590 | 1.055420e-87 | -8.615850e-47 |
| Msa0296720 | Msa1366180 | 0.815647 | 8.305380e-52 | -8.615850e-47 |
| Msa0298200 | Msa1366180 | 0.815974 | 7.020048e-52 | -8.615850e-47 |
| Msa0298990 | Msa1366180 | 0.863198 | 2.954146e-64 | -8.615850e-47 |
| Msa0300350 | Msa1366180 | 0.841952 | 3.477401e-58 | -8.615850e-47 |
| Msa0306690 | Msa1366180 | 0.878723 | 2.229180e-69 | -8.615850e-47 |
| Msa0321640 | Msa1366180 | 0.872380 | 3.326365e-67 | -8.615850e-47 |
| Msa0327300 | Msa1366180 | 0.901104 | 3.754884e-78 | -8.615850e-47 |
| Msa0327330 | Msa1366180 | 0.907903 | 3.060574e-81 | -8.615850e-47 |
| Msa0335840 | Msa1366180 | 0.801332 | 9.465488e-49 | -8.615850e-47 |
| Msa0336010 | Msa1366180 | 0.835051 | 2.100757e-56 | -8.615850e-47 |
| Msa0337650 | Msa1366180 | 0.820203 | 7.766649e-53 | -8.615850e-47 |
| Msa0341040 | Msa1366180 | 0.800606 | 1.331755e-48 | -8.615850e-47 |
| Msa0342850 | Msa1366180 | 0.819507 | 1.119936e-52 | -8.615850e-47 |
| Msa0348830 | Msa1366180 | 0.834034 | 3.785045e-56 | -8.615850e-47 |
| Msa1125860 | Msa1366180 | 0.852252 | 5.215518e-61 | -8.615850e-47 |
| Msa1126060 | Msa1366180 | 0.846563 | 2.008052e-59 | -8.615850e-47 |
| Msa1126510 | Msa1366180 | 0.811995 | 5.295767e-51 | -8.615850e-47 |
| Msa1128120 | Msa1366180 | 0.809982 | 1.445526e-50 | -8.615850e-47 |
| Msa1135890 | Msa1366180 | 0.838631 | 2.564314e-57 | -8.615850e-47 |
| Msa1166860 | Msa1366180 | 0.831241 | 1.866245e-55 | -8.615850e-47 |
| Msa1166870 | Msa1366180 | 0.844787 | 6.089654e-59 | -8.615850e-47 |
| Msa1167540 | Msa1366180 | 0.827031 | 1.957886e-54 | -8.615850e-47 |
| Msa1167550 | Msa1366180 | 0.849194 | 3.781508e-60 | -8.615850e-47 |
| Msa1181830 | Msa1366180 | 0.804335 | 2.270093e-49 | -8.615850e-47 |
| Msa1209200 | Msa1366180 | 0.821278 | 4.396505e-53 | -8.615850e-47 |
| Msa1209260 | Msa1366180 | 0.809270 | 2.055761e-50 | -8.615850e-47 |
| Msa1213480 | Msa1366180 | 0.806985 | 6.304993e-50 | -8.615850e-47 |
| Msa1215820 | Msa1366180 | 0.912481 | 1.854859e-83 | -8.615850e-47 |
| Msa1218600 | Msa1366180 | 0.810512 | 1.110909e-50 | -8.615850e-47 |
| Msa0483110 | Msa1366180 | 0.854678 | 1.049237e-61 | -8.615850e-47 |
| Msa0486070 | Msa1366180 | 0.817696 | 2.884481e-52 | -8.615850e-47 |
| Msa0526540 | Msa1366180 | 0.875318 | 3.387999e-68 | -8.615850e-47 |
| Msa0527150 | Msa1366180 | 0.801489 | 8.791571e-49 | -8.615850e-47 |
| Msa0531650 | Msa1366180 | 0.803251 | 3.810414e-49 | -8.615850e-47 |
| Msa0554290 | Msa1366180 | 0.805764 | 1.140582e-49 | -8.615850e-47 |
| Msa0571920 | Msa1366180 | 0.867421 | 1.386041e-65 | -8.615850e-47 |
| Msa0576940 | Msa1366180 | 0.881208 | 2.905100e-70 | -8.615850e-47 |
| Msa0581280 | Msa1366180 | 0.824711 | 6.959626e-54 | -8.615850e-47 |
| Msa0588360 | Msa1366180 | 0.802206 | 6.262228e-49 | -8.615850e-47 |
| Msa0881290 | Msa1366180 | 0.818616 | 1.786633e-52 | -8.615850e-47 |
| Msa0888810 | Msa1366180 | 0.816355 | 5.772211e-52 | -8.615850e-47 |
| Msa0902760 | Msa1366180 | 0.803994 | 2.672640e-49 | -8.615850e-47 |
| Msa0925770 | Msa1366180 | 0.815917 | 7.228891e-52 | -8.615850e-47 |
| Msa0930490 | Msa1366180 | 0.829026 | 6.479095e-55 | -8.615850e-47 |
| Msa0933300 | Msa1366180 | 0.815553 | 8.716341e-52 | -8.615850e-47 |
| Msa0945480 | Msa1366180 | 0.829090 | 6.250975e-55 | -8.615850e-47 |
| Msa0953310 | Msa1366180 | 0.812974 | 3.235367e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366180 | MtrunA17_Chr1g0187471 | 82.707 | 133 | 1 | 1 | 19 | 129 | 1 | 133 | 1.32e-70 | 207 |
| Msa1366180 | MtrunA17_Chr4g0067861 | 78.947 | 133 | 6 | 1 | 19 | 129 | 1 | 133 | 3.98e-69 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1366180 | AT2G20450.1 | 69.173 | 133 | 19 | 1 | 19 | 129 | 1 | 133 | 4.72e-57 | 174 |
| Msa1366180 | AT4G27090.1 | 70.000 | 130 | 17 | 1 | 19 | 126 | 1 | 130 | 7.65e-57 | 173 |
Find 63 sgRNAs with CRISPR-Local
Find 338 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGCAATCAAAAGCATAAA+TGG | 0.243731 | tig0018446:-47756 | None:intergenic |
| TTGACGAGATCCTTCTTCTT+AGG | 0.248112 | tig0018446:-42758 | None:intergenic |
| GTCAACTATGGCCCAGATTA+TGG | 0.258615 | tig0018446:+42510 | Msa1366180:CDS |
| CATGGGCAATAACATTTCTT+TGG | 0.268425 | tig0018446:-48251 | None:intergenic |
| CTGAATTGTCCTAGACTTAG+AGG | 0.278421 | tig0018446:-48068 | None:intergenic |
| ACAACGAGCTTGCCATAATC+TGG | 0.305463 | tig0018446:-42522 | None:intergenic |
| GACATTCATACAATGTTTAC+AGG | 0.311357 | tig0018446:-48155 | None:intergenic |
| TCTCGTAACACAAATATCTT+AGG | 0.315582 | tig0018446:-43883 | None:intergenic |
| GCTAGTGTTATATTCATAAA+TGG | 0.324121 | tig0018446:+48228 | Msa1366180:three_prime_UTR |
| GAAAATGGGTTACCCTAGTT+TGG | 0.329740 | tig0018446:-42563 | None:intergenic |
| GAAAGCCTCTTGAAATTGAT+TGG | 0.348542 | tig0018446:-42701 | None:intergenic |
| AATGTCCCTTGTGGACATTC+TGG | 0.368012 | tig0018446:+48172 | Msa1366180:three_prime_UTR |
| TCCAAGTTGTACTAAATAGA+AGG | 0.385008 | tig0018446:-43814 | None:intergenic |
| ACGAATATCAACAATGTTCA+TGG | 0.386857 | tig0018446:-48269 | None:intergenic |
| GTGCCTCAGAAAATCGAAAA+TGG | 0.394255 | tig0018446:+42367 | Msa1366180:CDS |
| GACTGTTAACATGTAACTTA+CGG | 0.428959 | tig0018446:-48104 | None:intergenic |
| TGCAGAGGGCTGGTGTTGTT+AGG | 0.431787 | tig0018446:+43713 | Msa1366180:intron |
| TTGATGTTATCGACCAAACT+AGG | 0.433748 | tig0018446:+42550 | Msa1366180:CDS |
| ACTGTTAACATGTAACTTAC+GGG | 0.446737 | tig0018446:-48103 | None:intergenic |
| GAGTATTGCAACATTTGTAA+TGG | 0.447120 | tig0018446:-47979 | None:intergenic |
| AACAATCAATTTCCTTCCCC+AGG | 0.448020 | tig0018446:-42945 | None:intergenic |
| TCCTTCTATTTAGTACAACT+TGG | 0.449660 | tig0018446:+43813 | Msa1366180:three_prime_UTR |
| ATTGGAGCTCTCTCCATGTC+AGG | 0.463357 | tig0018446:-42683 | None:intergenic |
| GCTGAGGAAGACCGCTGCTT+AGG | 0.472651 | tig0018446:+43750 | Msa1366180:CDS |
| AATTCTACCTGCAGCTTCCA+TGG | 0.474519 | tig0018446:-42783 | None:intergenic |
| AGAGTTGCACTTGTCAACTA+TGG | 0.476767 | tig0018446:+42498 | Msa1366180:CDS |
| ACCCACTCTCTCTGCCTTGA+GGG | 0.478423 | tig0018446:-48022 | None:intergenic |
| TCTTTGCTCCCTCTAAGTCT+AGG | 0.480015 | tig0018446:+48059 | Msa1366180:three_prime_UTR |
| TTTCAATTTGTGCAGAGGGC+TGG | 0.483986 | tig0018446:+43703 | Msa1366180:intron |
| AATCTGTTAGAAGTTTCAAA+TGG | 0.493350 | tig0018446:+47887 | Msa1366180:three_prime_UTR |
| TTCAAGAGGTTTGTTGAGAT+CGG | 0.494020 | tig0018446:+42474 | Msa1366180:CDS |
| GCCTTGAGGGTAACAAGTGT+TGG | 0.498316 | tig0018446:-48009 | None:intergenic |
| CAAGAGAGTTCCTAAGAAGA+AGG | 0.504705 | tig0018446:+42748 | Msa1366180:CDS |
| TATGATACCAAGTCATGAAT+CGG | 0.522601 | tig0018446:-47956 | None:intergenic |
| TACAACTCCGATTCATGACT+TGG | 0.533448 | tig0018446:+47949 | Msa1366180:three_prime_UTR |
| ACAAGTGGGAGAAGAGCTCC+TGG | 0.539704 | tig0018446:+42927 | Msa1366180:CDS |
| ACACTAGCTTATGCATATCA+TGG | 0.544925 | tig0018446:-48213 | None:intergenic |
| CAACGAGCTTGCCATAATCT+GGG | 0.548769 | tig0018446:-42521 | None:intergenic |
| CGAATATCAACAATGTTCAT+GGG | 0.556230 | tig0018446:-48268 | None:intergenic |
| TGATAGATGTGAAGAACAAG+TGG | 0.562094 | tig0018446:+42912 | Msa1366180:intron |
| TACCCTCAAGGCAGAGAGAG+TGG | 0.562638 | tig0018446:+48020 | Msa1366180:three_prime_UTR |
| GGCACTCGCAGCTGAAACAA+AGG | 0.562800 | tig0018446:-42349 | None:intergenic |
| GTCAAAGCCATGGAAGCTGC+AGG | 0.563654 | tig0018446:+42776 | Msa1366180:CDS |
| ATCTCAACAAACCTCTTGAA+CGG | 0.571035 | tig0018446:-42471 | None:intergenic |
| GAAGGATCTCGTCAAAGCCA+TGG | 0.572972 | tig0018446:+42766 | Msa1366180:CDS |
| TAGCTTATGCATATCATGGT+TGG | 0.577923 | tig0018446:-48209 | None:intergenic |
| GAGCTCCAATCAATTTCAAG+AGG | 0.584468 | tig0018446:+42696 | Msa1366180:CDS |
| ATCAAGCAAGAAAGAGCTAG+AGG | 0.585153 | tig0018446:+47810 | Msa1366180:three_prime_UTR |
| GGGAGAAGAGCTCCTGGGGA+AGG | 0.586483 | tig0018446:+42933 | Msa1366180:CDS |
| TCTTTGTTCAGCCGTTCAAG+AGG | 0.591089 | tig0018446:+42460 | Msa1366180:intron |
| AACCCACTCTCTCTGCCTTG+AGG | 0.593852 | tig0018446:-48023 | None:intergenic |
| TCTTGTTGATGCACCTGACA+TGG | 0.596389 | tig0018446:+42670 | Msa1366180:CDS |
| ACCCTCAAGGCAGAGAGAGT+GGG | 0.605053 | tig0018446:+48021 | Msa1366180:three_prime_UTR |
| TCCAACACTTGTTACCCTCA+AGG | 0.605743 | tig0018446:+48008 | Msa1366180:three_prime_UTR |
| TGATGTTATCGACCAAACTA+GGG | 0.607546 | tig0018446:+42551 | Msa1366180:CDS |
| GGCAAGAACTTGCTAAGCTG+AGG | 0.613930 | tig0018446:+43734 | Msa1366180:CDS |
| AAGTGGGAGAAGAGCTCCTG+GGG | 0.619297 | tig0018446:+42929 | Msa1366180:CDS |
| GATAGATGTGAAGAACAAGT+GGG | 0.623335 | tig0018446:+42913 | Msa1366180:intron |
| TGAATTGTCCTAGACTTAGA+GGG | 0.624453 | tig0018446:-48067 | None:intergenic |
| CAAGTGGGAGAAGAGCTCCT+GGG | 0.641380 | tig0018446:+42928 | Msa1366180:CDS |
| CATTGTATGAATGTCCCTTG+TGG | 0.683978 | tig0018446:+48163 | Msa1366180:three_prime_UTR |
| ATGAAGTAATGCCTAAGCAG+CGG | 0.686386 | tig0018446:-43761 | None:intergenic |
| TTTCACCAGAATGTCCACAA+GGG | 0.722276 | tig0018446:-48177 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGAAATTTTATAATTTGAA+AGG | + | tig0018446:44685-44704 | Msa1366180:intron | 10.0% |
| !!! | GTTTTTTTTTTTTTTTTTGA+GGG | + | tig0018446:45674-45693 | Msa1366180:intron | 10.0% |
| !! | ACAAAAATAAATATATAGAT+AGG | - | tig0018446:46690-46709 | None:intergenic | 10.0% |
| !!! | ATTTTATGATAAAAGATTAA+GGG | - | tig0018446:47372-47391 | None:intergenic | 10.0% |
| !!! | AATTTTATGATAAAAGATTA+AGG | - | tig0018446:47373-47392 | None:intergenic | 10.0% |
| !!! | TAATCTTTTATCATAAAATT+TGG | + | tig0018446:47373-47392 | Msa1366180:intron | 10.0% |
| !! | ACAAAAATAAATACATAGAT+AGG | - | tig0018446:42820-42839 | None:intergenic | 15.0% |
| !!! | TATATTTTGTTTGTTGAAAT+TGG | + | tig0018446:42849-42868 | Msa1366180:intron | 15.0% |
| !!! | TGGATTTTTTTTTTTTTTTG+TGG | + | tig0018446:42869-42888 | Msa1366180:intron | 15.0% |
| !!! | TTTTTTTTTTTTGTGGTAAT+TGG | + | tig0018446:42876-42895 | Msa1366180:intron | 15.0% |
| !! | TTTGGTTAAATAACTTAATT+AGG | + | tig0018446:43091-43110 | Msa1366180:intron | 15.0% |
| !! | TATGTTCAAAAATTGTTAAA+TGG | - | tig0018446:43536-43555 | None:intergenic | 15.0% |
| !! | ATTATGATTTAAACTTACTT+TGG | + | tig0018446:44462-44481 | Msa1366180:intron | 15.0% |
| !! | TTATGATTTAAACTTACTTT+GGG | + | tig0018446:44463-44482 | Msa1366180:intron | 15.0% |
| !!! | TTTTTATGTTAAATGATTAC+TGG | - | tig0018446:44810-44829 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | - | tig0018446:45390-45409 | None:intergenic | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | - | tig0018446:45389-45408 | None:intergenic | 15.0% |
| !!! | AATTTTGCAATAATTTTTTG+CGG | - | tig0018446:45133-45152 | None:intergenic | 15.0% |
| !! | AGATAAAAAGTAATAAAATC+TGG | - | tig0018446:45168-45187 | None:intergenic | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | + | tig0018446:45299-45318 | Msa1366180:intron | 15.0% |
| !! | AAATGCTATTAAAATTAAGT+AGG | + | tig0018446:45389-45408 | Msa1366180:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+GGG | + | tig0018446:45390-45409 | Msa1366180:intron | 15.0% |
| !! | ACTTATTATCATTATTTGTT+GGG | - | tig0018446:45433-45452 | None:intergenic | 15.0% |
| !! | AACTTATTATCATTATTTGT+TGG | - | tig0018446:45434-45453 | None:intergenic | 15.0% |
| !!! | GGTTTTTTTTTTTTTTTTTG+AGG | + | tig0018446:45673-45692 | Msa1366180:intron | 15.0% |
| !!! | ATAATAGCTTTTCTTTATTT+TGG | + | tig0018446:46118-46137 | Msa1366180:intron | 15.0% |
| !!! | TAATAGCTTTTCTTTATTTT+GGG | + | tig0018446:46119-46138 | Msa1366180:intron | 15.0% |
| !! | AAATAAATCTCATAAATAGA+AGG | - | tig0018446:47722-47741 | None:intergenic | 15.0% |
| !! | ATTAGAGAAAGATTAAGAAA+TGG | - | tig0018446:42428-42447 | None:intergenic | 20.0% |
| !! | AAGATTGGAAATTTGAAAAT+GGG | - | tig0018446:42580-42599 | None:intergenic | 20.0% |
| !! | AAAGATTGGAAATTTGAAAA+TGG | - | tig0018446:42581-42600 | None:intergenic | 20.0% |
| !!! | TTTTCAGAAATTAAGCAAAT+GGG | - | tig0018446:42621-42640 | None:intergenic | 20.0% |
| !!! | TTTTTCAGAAATTAAGCAAA+TGG | - | tig0018446:42622-42641 | None:intergenic | 20.0% |
| !! | CTAAAATTATACCTTAATCT+TGG | - | tig0018446:43023-43042 | None:intergenic | 20.0% |
| !! | TTAAGTTATTTAACCAAACA+AGG | - | tig0018446:43089-43108 | None:intergenic | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+GGG | - | tig0018446:43171-43190 | None:intergenic | 20.0% |
| !! | TTTGGATAAATAACTTAACT+TGG | + | tig0018446:43173-43192 | Msa1366180:intron | 20.0% |
| !!! | ATTGTTTTTGTATAAGCTTT+AGG | + | tig0018446:43275-43294 | Msa1366180:intron | 20.0% |
| !!! | TTGTTTTTGTATAAGCTTTA+GGG | + | tig0018446:43276-43295 | Msa1366180:intron | 20.0% |
| !!! | AATCTGTTTCTTAAGTTATT+TGG | + | tig0018446:43493-43512 | Msa1366180:intron | 20.0% |
| !!! | TGTTTTTTCAAATTGTGTTT+TGG | + | tig0018446:43642-43661 | Msa1366180:intron | 20.0% |
| !!! | GTTTGCATATTTTTTAATGT+TGG | + | tig0018446:44007-44026 | Msa1366180:intron | 20.0% |
| !! | TGAACATATCATTAAGTAAA+TGG | + | tig0018446:44344-44363 | Msa1366180:intron | 20.0% |
| !! | ATCATAATTAACTCATAACA+CGG | - | tig0018446:44450-44469 | None:intergenic | 20.0% |
| !! | TATGATTTAAACTTACTTTG+GGG | + | tig0018446:44464-44483 | Msa1366180:intron | 20.0% |
| !!! | TTAAATGACATTTTACAATC+AGG | + | tig0018446:44589-44608 | Msa1366180:intron | 20.0% |
| !! | TATAATTTGAAAGGATTGTA+TGG | + | tig0018446:44694-44713 | Msa1366180:intron | 20.0% |
| !! | AAAAAAATCAAAATGACTAC+AGG | + | tig0018446:44730-44749 | Msa1366180:intron | 20.0% |
| !! | AGTGCAGAAAAATAAAATTA+GGG | - | tig0018446:45005-45024 | None:intergenic | 20.0% |
| !! | AAACAAATTTGAATTGAGTA+GGG | - | tig0018446:45038-45057 | None:intergenic | 20.0% |
| !! | TAAACAAATTTGAATTGAGT+AGG | - | tig0018446:45039-45058 | None:intergenic | 20.0% |
| !!! | TTTGTGATGTTTTATATAGA+GGG | - | tig0018446:46176-46195 | None:intergenic | 20.0% |
| !!! | TTTTGTGATGTTTTATATAG+AGG | - | tig0018446:46177-46196 | None:intergenic | 20.0% |
| !! | ATTAGAGAAAGATTAAGAAA+TGG | - | tig0018446:42428-42447 | None:intergenic | 20.0% |
| !! | AAGATTGGAAATTTGAAAAT+GGG | - | tig0018446:42580-42599 | None:intergenic | 20.0% |
| !! | AAAGATTGGAAATTTGAAAA+TGG | - | tig0018446:42581-42600 | None:intergenic | 20.0% |
| !!! | TAGCTTTTTTTTGTTGAAAT+TGG | + | tig0018446:46738-46757 | Msa1366180:intron | 20.0% |
| !!! | TTGAAATTGGATTTTAATTG+TGG | + | tig0018446:46751-46770 | Msa1366180:intron | 20.0% |
| !! | CTAAAATTATACCTTAATCT+TGG | - | tig0018446:43023-43042 | None:intergenic | 20.0% |
| !!! | TTGTGAATTGATTTTAAGTT+AGG | + | tig0018446:46941-46960 | Msa1366180:intron | 20.0% |
| !!! | TGTGAATTGATTTTAAGTTA+GGG | + | tig0018446:46942-46961 | Msa1366180:intron | 20.0% |
| !! | TTAAGTTATTTATCCAAACA+AGG | - | tig0018446:43171-43190 | None:intergenic | 20.0% |
| !!! | ATTGTATTTCTATAAGCTTT+AGG | + | tig0018446:47155-47174 | Msa1366180:intron | 20.0% |
| !!! | TTGTATTTCTATAAGCTTTA+GGG | + | tig0018446:47156-47175 | Msa1366180:intron | 20.0% |
| !!! | GATTGCATATTTTTTAATGT+AGG | + | tig0018446:47770-47789 | Msa1366180:three_prime_UTR | 20.0% |
| !!! | GTTTGCATATTTTTTAATGT+TGG | + | tig0018446:44007-44026 | Msa1366180:intron | 20.0% |
| ! | GAACCTATCAAAATCATTAA+GGG | - | tig0018446:42987-43006 | None:intergenic | 25.0% |
| ! | TGAACCTATCAAAATCATTA+AGG | - | tig0018446:42988-43007 | None:intergenic | 25.0% |
| !!! | TTGTGAAATGCTTTTTAGTT+AGG | + | tig0018446:43063-43082 | Msa1366180:intron | 25.0% |
| !!! | TTGTGAAATGCTTTTAAGTT+AGG | + | tig0018446:43145-43164 | Msa1366180:intron | 25.0% |
| ! | GTTAAGTTATTTATCCAAAC+AGG | - | tig0018446:43172-43191 | None:intergenic | 25.0% |
| !! | TTTTCATAAGTCAATCCAAA+CGG | - | tig0018446:43303-43322 | None:intergenic | 25.0% |
| ! | ATAATTTCAATTTGTGCAGA+GGG | + | tig0018446:43699-43718 | Msa1366180:intron | 25.0% |
| ! | TATGCAATCAAAAGCAAAAA+TGG | - | tig0018446:43930-43949 | None:intergenic | 25.0% |
| !!! | CTAGAGGTTTTATTGTTATT+AGG | + | tig0018446:43985-44004 | Msa1366180:intron | 25.0% |
| ! | ATGATTTAAACTTACTTTGG+GGG | + | tig0018446:44465-44484 | Msa1366180:intron | 25.0% |
| !! | ACAAAATCATGAAGATTTTG+AGG | + | tig0018446:44527-44546 | Msa1366180:intron | 25.0% |
| !! | CAAAATCATGAAGATTTTGA+GGG | + | tig0018446:44528-44547 | Msa1366180:intron | 25.0% |
| !!! | GGGATTATATTGATTTTTGT+TGG | + | tig0018446:44548-44567 | Msa1366180:intron | 25.0% |
| !! | TTTTGAACACATGACTTTAA+CGG | + | tig0018446:44613-44632 | Msa1366180:intron | 25.0% |
| !!! | TGACTTTAACGGATTTATAA+CGG | + | tig0018446:44624-44643 | Msa1366180:intron | 25.0% |
| !!! | CAGATTTTTTGAGATTTCAA+AGG | + | tig0018446:44657-44676 | Msa1366180:intron | 25.0% |
| ! | AATCTGCTAACAAACAAATA+AGG | + | tig0018446:44901-44920 | Msa1366180:intron | 25.0% |
| ! | ATCTGCTAACAAACAAATAA+GGG | + | tig0018446:44902-44921 | Msa1366180:intron | 25.0% |
| ! | CAGTGCAGAAAAATAAAATT+AGG | - | tig0018446:45006-45025 | None:intergenic | 25.0% |
| !!! | TAATCAAACTTTGTTTTAGC+AGG | + | tig0018446:45327-45346 | Msa1366180:intron | 25.0% |
| !!! | AATCAAACTTTGTTTTAGCA+GGG | + | tig0018446:45328-45347 | Msa1366180:intron | 25.0% |
| !! | TTTGAATGTGTATGTCTTTT+AGG | - | tig0018446:45867-45886 | None:intergenic | 25.0% |
| ! | TTGTTGTATAAGTAAAGATG+AGG | + | tig0018446:46068-46087 | Msa1366180:intron | 25.0% |
| !! | TTGTGATGTTTTATATAGAG+GGG | - | tig0018446:46175-46194 | None:intergenic | 25.0% |
| !!! | TTTTGAGAAATTACGCAAAT+GGG | - | tig0018446:46495-46514 | None:intergenic | 25.0% |
| !!! | TTTTTGAGAAATTACGCAAA+TGG | - | tig0018446:46496-46515 | None:intergenic | 25.0% |
| !!! | TGGATTTTAATTGTGGTAAT+TGG | + | tig0018446:46758-46777 | Msa1366180:intron | 25.0% |
| ! | GAACCTATCAAAATCATTAA+GGG | - | tig0018446:42987-43006 | None:intergenic | 25.0% |
| ! | TGAACCTATCAAAATCATTA+AGG | - | tig0018446:42988-43007 | None:intergenic | 25.0% |
| !! | TTTGCATTTTATAGTGTAAG+TGG | + | tig0018446:47072-47091 | Msa1366180:intron | 25.0% |
| !! | TTGCATTTTATAGTGTAAGT+GGG | + | tig0018446:47073-47092 | Msa1366180:intron | 25.0% |
| ! | GGTTATTATATAAGCTGTTA+TGG | + | tig0018446:47095-47114 | Msa1366180:intron | 25.0% |
| ! | CAAGTTTGTCTATGAAAAAA+CGG | - | tig0018446:47279-47298 | None:intergenic | 25.0% |
| ! | TAAAATAAGCTAATCCAAAC+AGG | + | tig0018446:47489-47508 | Msa1366180:intron | 25.0% |
| !!! | TTGTTTTTCAAATTGTGTCT+AGG | + | tig0018446:47540-47559 | Msa1366180:intron | 25.0% |
| ! | TTAAATTTCAATTTGTGCAG+AGG | + | tig0018446:47600-47619 | Msa1366180:intron | 25.0% |
| ! | TAAATTTCAATTTGTGCAGA+GGG | + | tig0018446:47601-47620 | Msa1366180:intron | 25.0% |
| !! | TATGCAATCAAAAGCATAAA+TGG | - | tig0018446:47759-47778 | None:intergenic | 25.0% |
| ! | AATCTGTTAGAAGTTTCAAA+TGG | + | tig0018446:47887-47906 | Msa1366180:three_prime_UTR | 25.0% |
| ! | GCTAGTGTTATATTCATAAA+TGG | + | tig0018446:48228-48247 | Msa1366180:three_prime_UTR | 25.0% |
| GGATGAAAATGGAAAAAGAT+TGG | - | tig0018446:42595-42614 | None:intergenic | 30.0% | |
| !!! | TTGTGATTTGTTTGTTTTGC+AGG | + | tig0018446:42646-42665 | Msa1366180:intron | 30.0% |
| GGAAATTGATTGTTAAGAAG+AGG | + | tig0018446:42954-42973 | Msa1366180:intron | 30.0% | |
| AATTGATTGTTAAGAAGAGG+AGG | + | tig0018446:42957-42976 | Msa1366180:intron | 30.0% | |
| ATTGATTGTTAAGAAGAGGA+GGG | + | tig0018446:42958-42977 | Msa1366180:intron | 30.0% | |
| TGATAGGTTCAAGATTATGT+TGG | + | tig0018446:42997-43016 | Msa1366180:intron | 30.0% | |
| ! | AATTAGGCTTTTAGTGTAAG+TGG | + | tig0018446:43107-43126 | Msa1366180:intron | 30.0% |
| AAAGTTGTATCTTCATAAGC+TGG | + | tig0018446:43378-43397 | Msa1366180:intron | 30.0% | |
| TAATATTCATGAGCTTGTCA+AGG | - | tig0018446:43418-43437 | None:intergenic | 30.0% | |
| CATAATTTCAATTTGTGCAG+AGG | + | tig0018446:43698-43717 | Msa1366180:intron | 30.0% | |
| TCCTTCTATTTAGTACAACT+TGG | + | tig0018446:43813-43832 | Msa1366180:three_prime_UTR | 30.0% | |
| TCCAAGTTGTACTAAATAGA+AGG | - | tig0018446:43817-43836 | None:intergenic | 30.0% | |
| ! | TTTTGTATCACTAAGACAGT+TGG | + | tig0018446:43847-43866 | Msa1366180:three_prime_UTR | 30.0% |
| TCTCGTAACACAAATATCTT+AGG | - | tig0018446:43886-43905 | None:intergenic | 30.0% | |
| AGACAAAACATGTAACTTAC+AGG | - | tig0018446:44240-44259 | None:intergenic | 30.0% | |
| TGATTTAAACTTACTTTGGG+GGG | + | tig0018446:44466-44485 | Msa1366180:intron | 30.0% | |
| ! | GAGATTTCAGAAGACTATTT+TGG | + | tig0018446:44501-44520 | Msa1366180:intron | 30.0% |
| CAAGATTAGAACACTATGAA+AGG | - | tig0018446:45265-45284 | None:intergenic | 30.0% | |
| !!! | CCAATTTTGAAATGGATTTC+AGG | - | tig0018446:45552-45571 | None:intergenic | 30.0% |
| CCTGAAATCCATTTCAAAAT+TGG | + | tig0018446:45549-45568 | Msa1366180:intron | 30.0% | |
| AAATCCATTTCAAAATTGGC+AGG | + | tig0018446:45553-45572 | Msa1366180:intron | 30.0% | |
| AATCCATTTCAAAATTGGCA+GGG | + | tig0018446:45554-45573 | Msa1366180:intron | 30.0% | |
| GATTAAATTGTGGGTGTATT+TGG | - | tig0018446:45627-45646 | None:intergenic | 30.0% | |
| TTGTATAAGTAAAGATGAGG+TGG | + | tig0018446:46071-46090 | Msa1366180:intron | 30.0% | |
| TGTATAAGTAAAGATGAGGT+GGG | + | tig0018446:46072-46091 | Msa1366180:intron | 30.0% | |
| !! | AGAGAGTGTTGTCAAAATTA+GGG | - | tig0018446:46201-46220 | None:intergenic | 30.0% |
| !! | TAGAGAGTGTTGTCAAAATT+AGG | - | tig0018446:46202-46221 | None:intergenic | 30.0% |
| GGATGAAAATGGAAAAAGAT+TGG | - | tig0018446:42595-42614 | None:intergenic | 30.0% | |
| !!! | TTGTGATTTGTTTGTTTTGC+AGG | + | tig0018446:42646-42665 | Msa1366180:intron | 30.0% |
| GGAAATTGATTGTTAAGAAG+AGG | + | tig0018446:42954-42973 | Msa1366180:intron | 30.0% | |
| AATTGATTGTTAAGAAGAGG+AGG | + | tig0018446:42957-42976 | Msa1366180:intron | 30.0% | |
| ATTGATTGTTAAGAAGAGGA+GGG | + | tig0018446:42958-42977 | Msa1366180:intron | 30.0% | |
| TGATAGGTTCAAGATTATGT+TGG | + | tig0018446:42997-43016 | Msa1366180:intron | 30.0% | |
| ! | TGCATTTTATAGTGTAAGTG+GGG | + | tig0018446:47074-47093 | Msa1366180:intron | 30.0% |
| ! | TGGAGATACAATGTTTGTTA+GGG | - | tig0018446:47252-47271 | None:intergenic | 30.0% |
| ATGGAGATACAATGTTTGTT+AGG | - | tig0018446:47253-47272 | None:intergenic | 30.0% | |
| TAAAAGATTAAGGGTCTGTT+TGG | - | tig0018446:47363-47382 | None:intergenic | 30.0% | |
| !!! | CTAGAGGTTTTATTGGTATT+AGG | + | tig0018446:47826-47845 | Msa1366180:three_prime_UTR | 30.0% |
| TATGATACCAAGTCATGAAT+CGG | - | tig0018446:47959-47978 | None:intergenic | 30.0% | |
| ! | GAGTATTGCAACATTTGTAA+TGG | - | tig0018446:47982-48001 | None:intergenic | 30.0% |
| ACTGTTAACATGTAACTTAC+GGG | - | tig0018446:48106-48125 | None:intergenic | 30.0% | |
| GACTGTTAACATGTAACTTA+CGG | - | tig0018446:48107-48126 | None:intergenic | 30.0% | |
| GACATTCATACAATGTTTAC+AGG | - | tig0018446:48158-48177 | None:intergenic | 30.0% | |
| ! | TCACCATTTTCGATTTTCTG+AGG | - | tig0018446:42373-42392 | None:intergenic | 35.0% |
| ATCTCAACAAACCTCTTGAA+CGG | - | tig0018446:42474-42493 | None:intergenic | 35.0% | |
| !! | TTCAAGAGGTTTGTTGAGAT+CGG | + | tig0018446:42474-42493 | Msa1366180:CDS | 35.0% |
| TTGATGTTATCGACCAAACT+AGG | + | tig0018446:42550-42569 | Msa1366180:CDS | 35.0% | |
| TGATGTTATCGACCAAACTA+GGG | + | tig0018446:42551-42570 | Msa1366180:CDS | 35.0% | |
| ! | AGAAATTAAGCAAATGGGCT+AGG | - | tig0018446:42616-42635 | None:intergenic | 35.0% |
| GAAAGCCTCTTGAAATTGAT+TGG | - | tig0018446:42704-42723 | None:intergenic | 35.0% | |
| TGATAGATGTGAAGAACAAG+TGG | + | tig0018446:42912-42931 | Msa1366180:intron | 35.0% | |
| GATAGATGTGAAGAACAAGT+GGG | + | tig0018446:42913-42932 | Msa1366180:intron | 35.0% | |
| !! | CTGCCCTTAATGATTTTGAT+AGG | + | tig0018446:42981-43000 | Msa1366180:intron | 35.0% |
| GATTATGTTGGCCAAGATTA+AGG | + | tig0018446:43009-43028 | Msa1366180:intron | 35.0% | |
| !!! | CTTTTTAGTTAGGCCTTGTT+TGG | + | tig0018446:43073-43092 | Msa1366180:intron | 35.0% |
| TGGAGCTTATTGTGTAAATG+TGG | + | tig0018446:43193-43212 | Msa1366180:intron | 35.0% | |
| GGTTATTATACGAGCTGTTA+TGG | + | tig0018446:43214-43233 | Msa1366180:intron | 35.0% | |
| CAGATTAAGTCTGTTCAGAT+TGG | - | tig0018446:43479-43498 | None:intergenic | 35.0% | |
| ! | ACCACACATAAGTTTCAAGT+TGG | + | tig0018446:43555-43574 | Msa1366180:intron | 35.0% |
| ACCAACTTGAAACTTATGTG+TGG | - | tig0018446:43559-43578 | None:intergenic | 35.0% | |
| AACCCTATAAACTCAGCTAA+GGG | - | tig0018446:43616-43635 | None:intergenic | 35.0% | |
| AAACCCTATAAACTCAGCTA+AGG | - | tig0018446:43617-43636 | None:intergenic | 35.0% | |
| ! | GAGTATTGCAGCATTTGTAA+TGG | - | tig0018446:44119-44138 | None:intergenic | 35.0% |
| CATGGGCAATAACATTTCTT+TGG | - | tig0018446:44370-44389 | None:intergenic | 35.0% | |
| ACTGCATCAACAATGTTCAT+GGG | - | tig0018446:44387-44406 | None:intergenic | 35.0% | |
| ! | GATTTAAACTTACTTTGGGG+GGG | + | tig0018446:44467-44486 | Msa1366180:intron | 35.0% |
| TACACCTTAAACACCATTAC+AGG | + | tig0018446:44842-44861 | Msa1366180:intron | 35.0% | |
| CATTCCTGTAATGGTGTTTA+AGG | - | tig0018446:44849-44868 | None:intergenic | 35.0% | |
| AAGTAGGGACTAAACTTACA+TGG | - | tig0018446:44961-44980 | None:intergenic | 35.0% | |
| TGCTCTATGTGCATTTGATT+TGG | - | tig0018446:45599-45618 | None:intergenic | 35.0% | |
| CAGAGTTGGGATTAAATTGT+GGG | - | tig0018446:45636-45655 | None:intergenic | 35.0% | |
| ACAGAGTTGGGATTAAATTG+TGG | - | tig0018446:45637-45656 | None:intergenic | 35.0% | |
| CAATTTAATCCCAACTCTGT+TGG | + | tig0018446:45637-45656 | Msa1366180:intron | 35.0% | |
| GATTGATTGTTTGTGTTGCA+GGG | - | tig0018446:45831-45850 | None:intergenic | 35.0% | |
| !!! | TCTTTTAGGTTTGACACTCA+GGG | - | tig0018446:45853-45872 | None:intergenic | 35.0% |
| ATCAAGTGTGCTAAGATGTT+TGG | - | tig0018446:45902-45921 | None:intergenic | 35.0% | |
| GTATAAGTAAAGATGAGGTG+GGG | + | tig0018446:46073-46092 | Msa1366180:intron | 35.0% | |
| !! | TGTTTTATATAGAGGGGCAT+TGG | - | tig0018446:46169-46188 | None:intergenic | 35.0% |
| ! | TCACCATTTTCGATTTTCTG+AGG | - | tig0018446:42373-42392 | None:intergenic | 35.0% |
| ATCTCAACAAACCTCTTGAA+CGG | - | tig0018446:42474-42493 | None:intergenic | 35.0% | |
| !! | TTCAAGAGGTTTGTTGAGAT+CGG | + | tig0018446:42474-42493 | Msa1366180:CDS | 35.0% |
| TTGATGTTATCGACCAAACT+AGG | + | tig0018446:42550-42569 | Msa1366180:CDS | 35.0% | |
| TGATGTTATCGACCAAACTA+GGG | + | tig0018446:42551-42570 | Msa1366180:CDS | 35.0% | |
| GAAAGCCTCTTGAAATTGAT+TGG | - | tig0018446:42704-42723 | None:intergenic | 35.0% | |
| TGATAGATGTGAAGAACAAG+TGG | + | tig0018446:42912-42931 | Msa1366180:intron | 35.0% | |
| GATAGATGTGAAGAACAAGT+GGG | + | tig0018446:42913-42932 | Msa1366180:intron | 35.0% | |
| !! | CTGCCCTTAATGATTTTGAT+AGG | + | tig0018446:42981-43000 | Msa1366180:intron | 35.0% |
| GATTATGTTGGCCAAGATTA+AGG | + | tig0018446:43009-43028 | Msa1366180:intron | 35.0% | |
| ! | TTAAGTTGTCTATCCAAGCA+GGG | - | tig0018446:46968-46987 | None:intergenic | 35.0% |
| ! | ATTAAGTTGTCTATCCAAGC+AGG | - | tig0018446:46969-46988 | None:intergenic | 35.0% |
| TTGTGAAATGCTCGTAAGTT+GGG | + | tig0018446:47026-47045 | Msa1366180:intron | 35.0% | |
| TTCTCATAACCCAATTCAAG+CGG | - | tig0018446:47183-47202 | None:intergenic | 35.0% | |
| GTCTATGAAAAAACGGCTTA+TGG | - | tig0018446:47272-47291 | None:intergenic | 35.0% | |
| !!! | TTTGGATTGGCTTCTTTTTG+AGG | - | tig0018446:47345-47364 | None:intergenic | 35.0% |
| AACCCTACATACTCAACTAA+GGG | - | tig0018446:47515-47534 | None:intergenic | 35.0% | |
| AAACCCTACATACTCAACTA+AGG | - | tig0018446:47516-47535 | None:intergenic | 35.0% | |
| !! | GAAAGAGCTAGAGGTTTTAT+TGG | + | tig0018446:43978-43997 | Msa1366180:intron | 35.0% |
| TGAATTGTCCTAGACTTAGA+GGG | - | tig0018446:48070-48089 | None:intergenic | 35.0% | |
| TAGCTTATGCATATCATGGT+TGG | - | tig0018446:48212-48231 | None:intergenic | 35.0% | |
| ! | ACACTAGCTTATGCATATCA+TGG | - | tig0018446:48216-48235 | None:intergenic | 35.0% |
| CATGGGCAATAACATTTCTT+TGG | - | tig0018446:44370-44389 | None:intergenic | 35.0% | |
| GTGCCTCAGAAAATCGAAAA+TGG | + | tig0018446:42367-42386 | Msa1366180:CDS | 40.0% | |
| AGAGTTGCACTTGTCAACTA+TGG | + | tig0018446:42498-42517 | Msa1366180:CDS | 40.0% | |
| !! | GAAAATGGGTTACCCTAGTT+TGG | - | tig0018446:42566-42585 | None:intergenic | 40.0% |
| !! | CAAATGGGCTAGGATGAAAA+TGG | - | tig0018446:42606-42625 | None:intergenic | 40.0% |
| GAGCTCCAATCAATTTCAAG+AGG | + | tig0018446:42696-42715 | Msa1366180:CDS | 40.0% | |
| CAAGAGAGTTCCTAAGAAGA+AGG | + | tig0018446:42748-42767 | Msa1366180:CDS | 40.0% | |
| TTGACGAGATCCTTCTTCTT+AGG | - | tig0018446:42761-42780 | None:intergenic | 40.0% | |
| AACAATCAATTTCCTTCCCC+AGG | - | tig0018446:42948-42967 | None:intergenic | 40.0% | |
| !!! | CTTTTAAGTTAGGCCCTGTT+TGG | + | tig0018446:43155-43174 | Msa1366180:intron | 40.0% |
| !! | TATAAGCTTTAGGGTCCGTT+TGG | + | tig0018446:43285-43304 | Msa1366180:intron | 40.0% |
| AAGCCCTTAGCTGAGTTTAT+AGG | + | tig0018446:43610-43629 | Msa1366180:intron | 40.0% | |
| AGCCCTTAGCTGAGTTTATA+GGG | + | tig0018446:43611-43630 | Msa1366180:intron | 40.0% | |
| ATGAAGTAATGCCTAAGCAG+CGG | - | tig0018446:43764-43783 | None:intergenic | 40.0% | |
| ATCAAGCAAGAAAGAGCTAG+AGG | + | tig0018446:43969-43988 | Msa1366180:intron | 40.0% | |
| ! | TCCAATACTTGTTACCCTCA+AGG | + | tig0018446:44145-44164 | Msa1366180:intron | 40.0% |
| TGTTCTTTGCTCCATAGTCT+AGG | + | tig0018446:44193-44212 | Msa1366180:intron | 40.0% | |
| TGCTGAATTGTCCTAGACTA+TGG | - | tig0018446:44207-44226 | None:intergenic | 40.0% | |
| CACTGCATCAACAATGTTCA+TGG | - | tig0018446:44388-44407 | None:intergenic | 40.0% | |
| ACAAGTGAGCATTCCTGTAA+TGG | - | tig0018446:44858-44877 | None:intergenic | 40.0% | |
| !!! | CTTCTCATTTTTTCCCCTGA+TGG | - | tig0018446:45522-45541 | None:intergenic | 40.0% |
| !! | TGACCCTGCCAATTTTGAAA+TGG | - | tig0018446:45560-45579 | None:intergenic | 40.0% |
| !! | CACATTTTGCGTCGATAATC+TGG | - | tig0018446:45737-45756 | None:intergenic | 40.0% |
| TGTTGCAGGGTAGCAATTTA+TGG | - | tig0018446:45818-45837 | None:intergenic | 40.0% | |
| GGATTGATTGTTTGTGTTGC+AGG | - | tig0018446:45832-45851 | None:intergenic | 40.0% | |
| !!! | GTCTTTTAGGTTTGACACTC+AGG | - | tig0018446:45854-45873 | None:intergenic | 40.0% |
| !! | ATATAGAGGGGCATTGGAAT+GGG | - | tig0018446:46163-46182 | None:intergenic | 40.0% |
| !! | TATATAGAGGGGCATTGGAA+TGG | - | tig0018446:46164-46183 | None:intergenic | 40.0% |
| GTGCCTCAGAAAATCGAAAA+TGG | + | tig0018446:42367-42386 | Msa1366180:CDS | 40.0% | |
| AGAGTTGCACTTGTCAACTA+TGG | + | tig0018446:42498-42517 | Msa1366180:CDS | 40.0% | |
| !! | GAAAATGGGTTACCCTAGTT+TGG | - | tig0018446:42566-42585 | None:intergenic | 40.0% |
| !! | CAAATGGGCTAGGATGAAAA+TGG | - | tig0018446:42606-42625 | None:intergenic | 40.0% |
| ! | AGAAATTACGCAAATGGGCT+AGG | - | tig0018446:46490-46509 | None:intergenic | 40.0% |
| GAGCTCCAATCAATTTCAAG+AGG | + | tig0018446:42696-42715 | Msa1366180:CDS | 40.0% | |
| CAAGAGAGTTCCTAAGAAGA+AGG | + | tig0018446:42748-42767 | Msa1366180:CDS | 40.0% | |
| TTGACGAGATCCTTCTTCTT+AGG | - | tig0018446:42761-42780 | None:intergenic | 40.0% | |
| TAAGAAGAAGGATCTCGTCA+AGG | + | tig0018446:42760-42779 | Msa1366180:CDS | 40.0% | |
| AACAATCAATTTCCTTCCCC+AGG | - | tig0018446:42948-42967 | None:intergenic | 40.0% | |
| TTTGCAGCTTGTAGTTCAAG+TGG | + | tig0018446:46988-47007 | Msa1366180:intron | 40.0% | |
| GTTGTGAAATGCTCGTAAGT+TGG | + | tig0018446:47025-47044 | Msa1366180:intron | 40.0% | |
| TCTCATAACCCAATTCAAGC+GGG | - | tig0018446:47182-47201 | None:intergenic | 40.0% | |
| GATTAAGGGTCTGTTTGGAT+TGG | - | tig0018446:47358-47377 | None:intergenic | 40.0% | |
| TCTCTGTGAGTACTTATGTG+TGG | - | tig0018446:47440-47459 | None:intergenic | 40.0% | |
| ! | CAGAGAGTCTTACATGCTTT+TGG | + | tig0018446:47454-47473 | Msa1366180:intron | 40.0% |
| ATGAAGTAATGCCTAAGCTG+CGG | - | tig0018446:47666-47685 | None:intergenic | 40.0% | |
| ATCAAGCAAGAAAGAGCTAG+AGG | + | tig0018446:43969-43988 | Msa1366180:intron | 40.0% | |
| TACAACTCCGATTCATGACT+TGG | + | tig0018446:47949-47968 | Msa1366180:three_prime_UTR | 40.0% | |
| CTGAATTGTCCTAGACTTAG+AGG | - | tig0018446:48071-48090 | None:intergenic | 40.0% | |
| CATTGTATGAATGTCCCTTG+TGG | + | tig0018446:48163-48182 | Msa1366180:three_prime_UTR | 40.0% | |
| TTTCACCAGAATGTCCACAA+GGG | - | tig0018446:48180-48199 | None:intergenic | 40.0% | |
| ! | TTTTCACCAGAATGTCCACA+AGG | - | tig0018446:48181-48200 | None:intergenic | 40.0% |
| TCTTTGTTCAGCCGTTCAAG+AGG | + | tig0018446:42460-42479 | Msa1366180:intron | 45.0% | |
| GTCAACTATGGCCCAGATTA+TGG | + | tig0018446:42510-42529 | Msa1366180:CDS | 45.0% | |
| CAACGAGCTTGCCATAATCT+GGG | - | tig0018446:42524-42543 | None:intergenic | 45.0% | |
| ACAACGAGCTTGCCATAATC+TGG | - | tig0018446:42525-42544 | None:intergenic | 45.0% | |
| TCTTGTTGATGCACCTGACA+TGG | + | tig0018446:42670-42689 | Msa1366180:CDS | 45.0% | |
| AATTCTACCTGCAGCTTCCA+TGG | - | tig0018446:42786-42805 | None:intergenic | 45.0% | |
| ! | AGCTAAGGGCTTGTTTGGAT+TGG | - | tig0018446:43602-43621 | None:intergenic | 45.0% |
| ! | AACTCAGCTAAGGGCTTGTT+TGG | - | tig0018446:43607-43626 | None:intergenic | 45.0% |
| TTTCAATTTGTGCAGAGGGC+TGG | + | tig0018446:43703-43722 | Msa1366180:intron | 45.0% | |
| GCCTTGAGGGTAACAAGTAT+TGG | - | tig0018446:44149-44168 | None:intergenic | 45.0% | |
| TATGTCTAGCTACTCCCTTG+TGG | + | tig0018446:44310-44329 | Msa1366180:intron | 45.0% | |
| ATGTCTAGCTACTCCCTTGT+GGG | + | tig0018446:44311-44330 | Msa1366180:intron | 45.0% | |
| TCACCAGAATATGCCCACAA+GGG | - | tig0018446:44327-44346 | None:intergenic | 45.0% | |
| TTCACCAGAATATGCCCACA+AGG | - | tig0018446:44328-44347 | None:intergenic | 45.0% | |
| GTGAGATGCAACTTCCATCA+GGG | + | tig0018446:45505-45524 | Msa1366180:intron | 45.0% | |
| TGAGATGCAACTTCCATCAG+GGG | + | tig0018446:45506-45525 | Msa1366180:intron | 45.0% | |
| CAGCTAATGCCAACAGAGTT+GGG | - | tig0018446:45649-45668 | None:intergenic | 45.0% | |
| TCAGCTAATGCCAACAGAGT+TGG | - | tig0018446:45650-45669 | None:intergenic | 45.0% | |
| TCTGTTGGCATTAGCTGAGA+AGG | + | tig0018446:45652-45671 | Msa1366180:intron | 45.0% | |
| TTTGAGGGACTTAGCTGAGA+AGG | + | tig0018446:45689-45708 | Msa1366180:intron | 45.0% | |
| ! | CGTCGATAATCTGGAGCATT+TGG | - | tig0018446:45728-45747 | None:intergenic | 45.0% |
| !! | ACATACAACCTGCGTTGACT+TGG | - | tig0018446:45791-45810 | None:intergenic | 45.0% |
| ATTGGAATGGGCCTTTGTTC+GGG | - | tig0018446:46151-46170 | None:intergenic | 45.0% | |
| CATTGGAATGGGCCTTTGTT+CGG | - | tig0018446:46152-46171 | None:intergenic | 45.0% | |
| TCTTTGTTCAGCCGTTCAAG+AGG | + | tig0018446:42460-42479 | Msa1366180:intron | 45.0% | |
| GTCAACTATGGCCCAGATTA+TGG | + | tig0018446:42510-42529 | Msa1366180:CDS | 45.0% | |
| CAACGAGCTTGCCATAATCT+GGG | - | tig0018446:42524-42543 | None:intergenic | 45.0% | |
| ACAACGAGCTTGCCATAATC+TGG | - | tig0018446:42525-42544 | None:intergenic | 45.0% | |
| TCTTGTTGATGCACCTGACA+TGG | + | tig0018446:42670-42689 | Msa1366180:CDS | 45.0% | |
| !!! | TTTTAAGTTAGGGCCCTGCT+TGG | + | tig0018446:46952-46971 | Msa1366180:intron | 45.0% |
| TACTCAACTAAGGGCCTGTT+TGG | - | tig0018446:47506-47525 | None:intergenic | 45.0% | |
| AGGCCCTTAGTTGAGTATGT+AGG | + | tig0018446:47509-47528 | Msa1366180:intron | 45.0% | |
| GGCCCTTAGTTGAGTATGTA+GGG | + | tig0018446:47510-47529 | Msa1366180:intron | 45.0% | |
| TTTCAATTTGTGCAGAGGGC+TGG | + | tig0018446:43703-43722 | Msa1366180:intron | 45.0% | |
| ! | TCCAACACTTGTTACCCTCA+AGG | + | tig0018446:48008-48027 | Msa1366180:three_prime_UTR | 45.0% |
| TCTTTGCTCCCTCTAAGTCT+AGG | + | tig0018446:48059-48078 | Msa1366180:three_prime_UTR | 45.0% | |
| AATGTCCCTTGTGGACATTC+TGG | + | tig0018446:48172-48191 | Msa1366180:three_prime_UTR | 45.0% | |
| !!! | ATAAGTAAATTTTTTTTTAT+AGG | + | tig0018446:45360-45379 | Msa1366180:intron | 5.0% |
| !!! | TAAGTAAATTTTTTTTTATA+GGG | + | tig0018446:45361-45380 | Msa1366180:intron | 5.0% |
| !!! | AATTAAATTTTAAATGATTT+TGG | - | tig0018446:46008-46027 | None:intergenic | 5.0% |
| ATTGGAGCTCTCTCCATGTC+AGG | - | tig0018446:42686-42705 | None:intergenic | 50.0% | |
| GAAGGATCTCGTCAAAGCCA+TGG | + | tig0018446:42766-42785 | Msa1366180:CDS | 50.0% | |
| !! | GGCAAGAACTTGCTAAGCTG+AGG | + | tig0018446:43734-43753 | Msa1366180:CDS | 50.0% |
| ACTCCCTTGTGGGCATATTC+TGG | + | tig0018446:44321-44340 | Msa1366180:intron | 50.0% | |
| CGTGAGATGCAACTTCCATC+AGG | + | tig0018446:45504-45523 | Msa1366180:intron | 50.0% | |
| ATGTCTTGCCAAGTCAACGC+AGG | + | tig0018446:45780-45799 | Msa1366180:intron | 50.0% | |
| ATGGGCCTTTGTTCGGGTAT+GGG | - | tig0018446:46145-46164 | None:intergenic | 50.0% | |
| AATGGGCCTTTGTTCGGGTA+TGG | - | tig0018446:46146-46165 | None:intergenic | 50.0% | |
| ATTGGAGCTCTCTCCATGTC+AGG | - | tig0018446:42686-42705 | None:intergenic | 50.0% | |
| GAAGGATCTCGTCAAGGCTA+TGG | + | tig0018446:46639-46658 | Msa1366180:intron | 50.0% | |
| !! | CTCGTAAGTTGGGCCTTGTT+TGG | + | tig0018446:47036-47055 | Msa1366180:intron | 50.0% |
| !! | CTTTAGGGCCCGCTTGAATT+GGG | + | tig0018446:47171-47190 | Msa1366180:intron | 50.0% |
| !! | GGCAAGAACTTGCTAAGCTG+AGG | + | tig0018446:43734-43753 | Msa1366180:CDS | 50.0% |
| GCCTTGAGGGTAACAAGTGT+TGG | - | tig0018446:48012-48031 | None:intergenic | 50.0% | |
| GGCACTCGCAGCTGAAACAA+AGG | - | tig0018446:42352-42371 | None:intergenic | 55.0% | |
| GTCAAAGCCATGGAAGCTGC+AGG | + | tig0018446:42776-42795 | Msa1366180:CDS | 55.0% | |
| ACAAGTGGGAGAAGAGCTCC+TGG | + | tig0018446:42927-42946 | Msa1366180:CDS | 55.0% | |
| CAAGTGGGAGAAGAGCTCCT+GGG | + | tig0018446:42928-42947 | Msa1366180:CDS | 55.0% | |
| AAGTGGGAGAAGAGCTCCTG+GGG | + | tig0018446:42929-42948 | Msa1366180:CDS | 55.0% | |
| !! | TGCAGAGGGCTGGTGTTGTT+AGG | + | tig0018446:43713-43732 | Msa1366180:intron | 55.0% |
| TACCCTCAAGGCTGAGAGAG+TGG | + | tig0018446:44157-44176 | Msa1366180:intron | 55.0% | |
| ACCCTCAAGGCTGAGAGAGT+GGG | + | tig0018446:44158-44177 | Msa1366180:intron | 55.0% | |
| ACCCACTCTCTCAGCCTTGA+GGG | - | tig0018446:44162-44181 | None:intergenic | 55.0% | |
| AACCCACTCTCTCAGCCTTG+AGG | - | tig0018446:44163-44182 | None:intergenic | 55.0% | |
| ! | CTTACTTTGGGGGGGCGTAT+TGG | + | tig0018446:44475-44494 | Msa1366180:intron | 55.0% |
| TTGGGCCCATACCCGAACAA+AGG | + | tig0018446:46137-46156 | Msa1366180:intron | 55.0% | |
| GGCACTCGCAGCTGAAACAA+AGG | - | tig0018446:42352-42371 | None:intergenic | 55.0% | |
| GTCAAGGCTATGGAAGCTGC+AGG | + | tig0018446:46649-46668 | Msa1366180:intron | 55.0% | |
| ACAAGTGGGAGAAGAGCTCC+TGG | + | tig0018446:42927-42946 | Msa1366180:CDS | 55.0% | |
| CAAGTGGGAGAAGAGCTCCT+GGG | + | tig0018446:42928-42947 | Msa1366180:CDS | 55.0% | |
| AAGTGGGAGAAGAGCTCCTG+GGG | + | tig0018446:42929-42948 | Msa1366180:CDS | 55.0% | |
| !! | GCTTTAGGGCCCGCTTGAAT+TGG | + | tig0018446:47170-47189 | Msa1366180:intron | 55.0% |
| !! | TGCAGAGGGCTGGTGTTGTT+AGG | + | tig0018446:43713-43732 | Msa1366180:intron | 55.0% |
| TACCCTCAAGGCAGAGAGAG+TGG | + | tig0018446:48020-48039 | Msa1366180:three_prime_UTR | 55.0% | |
| ACCCTCAAGGCAGAGAGAGT+GGG | + | tig0018446:48021-48040 | Msa1366180:three_prime_UTR | 55.0% | |
| ACCCACTCTCTCTGCCTTGA+GGG | - | tig0018446:48025-48044 | None:intergenic | 55.0% | |
| AACCCACTCTCTCTGCCTTG+AGG | - | tig0018446:48026-48045 | None:intergenic | 55.0% | |
| GCTGAGGAAGACCGCTGCTT+AGG | + | tig0018446:43750-43769 | Msa1366180:CDS | 60.0% | |
| GCTGAGGAAGACCGCAGCTT+AGG | + | tig0018446:47652-47671 | Msa1366180:intron | 60.0% | |
| GGGAGAAGAGCTCCTGGGGA+AGG | + | tig0018446:42933-42952 | Msa1366180:CDS | 65.0% | |
| GGGAGAAGAGCTCCTGGGGA+AGG | + | tig0018446:42933-42952 | Msa1366180:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0018446 | gene | 42332 | 48283 | 42332 | ID=Msa1366180;Name=Msa1366180 |
| tig0018446 | mRNA | 42332 | 48283 | 42332 | ID=Msa1366180-mRNA-1;Parent=Msa1366180;Name=Msa1366180-mRNA-1;_AED=0.24;_eAED=0.24;_QI=0|0.8|0.83|1|0.6|0.5|6|683|129 |
| tig0018446 | exon | 42332 | 42388 | 42332 | ID=Msa1366180-mRNA-1:exon:14981;Parent=Msa1366180-mRNA-1 |
| tig0018446 | exon | 42471 | 42572 | 42471 | ID=Msa1366180-mRNA-1:exon:14982;Parent=Msa1366180-mRNA-1 |
| tig0018446 | exon | 42668 | 42797 | 42668 | ID=Msa1366180-mRNA-1:exon:14983;Parent=Msa1366180-mRNA-1 |
| tig0018446 | exon | 42918 | 42964 | 42918 | ID=Msa1366180-mRNA-1:exon:14984;Parent=Msa1366180-mRNA-1 |
| tig0018446 | exon | 43718 | 43901 | 43718 | ID=Msa1366180-mRNA-1:exon:14985;Parent=Msa1366180-mRNA-1 |
| tig0018446 | exon | 47731 | 48283 | 47731 | ID=Msa1366180-mRNA-1:exon:14986;Parent=Msa1366180-mRNA-1 |
| tig0018446 | CDS | 42332 | 42388 | 42332 | ID=Msa1366180-mRNA-1:cds;Parent=Msa1366180-mRNA-1 |
| tig0018446 | CDS | 42471 | 42572 | 42471 | ID=Msa1366180-mRNA-1:cds;Parent=Msa1366180-mRNA-1 |
| tig0018446 | CDS | 42668 | 42797 | 42668 | ID=Msa1366180-mRNA-1:cds;Parent=Msa1366180-mRNA-1 |
| tig0018446 | CDS | 42918 | 42964 | 42918 | ID=Msa1366180-mRNA-1:cds;Parent=Msa1366180-mRNA-1 |
| tig0018446 | CDS | 43718 | 43771 | 43718 | ID=Msa1366180-mRNA-1:cds;Parent=Msa1366180-mRNA-1 |
| tig0018446 | three_prime_UTR | 43772 | 43901 | 43772 | ID=Msa1366180-mRNA-1:three_prime_utr;Parent=Msa1366180-mRNA-1 |
| tig0018446 | three_prime_UTR | 47731 | 48283 | 47731 | ID=Msa1366180-mRNA-1:three_prime_utr;Parent=Msa1366180-mRNA-1 |
| Gene Sequence |
| Protein sequence |
