Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433710 | XP_013464613.1 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 1.64e-161 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433710 | sp|F4JL28|EBS_ARATH | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.51e-138 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433710 | I3T296 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 7.81e-162 | 454 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa1433710 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0017510 | Msa1433710 | 0.825719 | 4.020537e-54 | -8.615850e-47 |
| Msa0028420 | Msa1433710 | 0.810471 | 1.134109e-50 | -8.615850e-47 |
| Msa0028640 | Msa1433710 | 0.802091 | 6.613015e-49 | -8.615850e-47 |
| Msa0076310 | Msa1433710 | 0.808130 | 3.603112e-50 | -8.615850e-47 |
| Msa0110970 | Msa1433710 | 0.821619 | 3.667128e-53 | -8.615850e-47 |
| Msa1351760 | Msa1433710 | 0.829874 | 4.032940e-55 | -8.615850e-47 |
| Msa1365060 | Msa1433710 | 0.809774 | 1.602273e-50 | -8.615850e-47 |
| Msa1374550 | Msa1433710 | 0.808951 | 2.406067e-50 | -8.615850e-47 |
| Msa1430240 | Msa1433710 | 0.810321 | 1.221366e-50 | -8.615850e-47 |
| Msa0743200 | Msa1433710 | 0.827636 | 1.402297e-54 | -8.615850e-47 |
| Msa0754520 | Msa1433710 | 0.840062 | 1.090258e-57 | -8.615850e-47 |
| Msa0760380 | Msa1433710 | 0.807315 | 5.367459e-50 | -8.615850e-47 |
| Msa0787260 | Msa1433710 | 0.819037 | 1.432838e-52 | -8.615850e-47 |
| Msa0824680 | Msa1433710 | 0.800743 | 1.248687e-48 | -8.615850e-47 |
| Msa0826580 | Msa1433710 | 0.842593 | 2.352107e-58 | -8.615850e-47 |
| Msa0833220 | Msa1433710 | 0.842266 | 2.872203e-58 | -8.615850e-47 |
| Msa0140780 | Msa1433710 | 0.800164 | 1.638365e-48 | -8.615850e-47 |
| Msa0157290 | Msa1433710 | 0.825570 | 4.362242e-54 | -8.615850e-47 |
| Msa0168500 | Msa1433710 | 0.800318 | 1.524347e-48 | -8.615850e-47 |
| Msa0189290 | Msa1433710 | 0.805388 | 1.367178e-49 | -8.615850e-47 |
| Msa0197230 | Msa1433710 | 0.812046 | 5.162024e-51 | -8.615850e-47 |
| Msa1242230 | Msa1433710 | 0.802556 | 5.304445e-49 | -8.615850e-47 |
| Msa1271290 | Msa1433710 | 0.808936 | 2.424367e-50 | -8.615850e-47 |
| Msa1278840 | Msa1433710 | 0.807842 | 4.148236e-50 | -8.615850e-47 |
| Msa1295850 | Msa1433710 | 0.801704 | 7.943074e-49 | -8.615850e-47 |
| Msa1331910 | Msa1433710 | 0.800139 | 1.657770e-48 | -8.615850e-47 |
| Msa0388160 | Msa1433710 | 0.821859 | 3.227607e-53 | -8.615850e-47 |
| Msa0410650 | Msa1433710 | 0.825621 | 4.243006e-54 | -8.615850e-47 |
| Msa0422850 | Msa1433710 | 0.801473 | 8.856236e-49 | -8.615850e-47 |
| Msa0422930 | Msa1433710 | 0.801954 | 7.055459e-49 | -8.615850e-47 |
| Msa0450440 | Msa1433710 | 0.803403 | 3.544541e-49 | -8.615850e-47 |
| Msa1085200 | Msa1433710 | 0.820685 | 6.019940e-53 | -8.615850e-47 |
| Msa0238890 | Msa1433710 | 0.821207 | 4.564368e-53 | -8.615850e-47 |
| Msa0255690 | Msa1433710 | 0.998043 | 8.438489e-255 | -8.615850e-47 |
| Msa0289890 | Msa1433710 | 0.801793 | 7.614402e-49 | -8.615850e-47 |
| Msa0308830 | Msa1433710 | 0.809986 | 1.442820e-50 | -8.615850e-47 |
| Msa0332920 | Msa1433710 | 0.805096 | 1.574125e-49 | -8.615850e-47 |
| Msa1127950 | Msa1433710 | 0.815106 | 1.095471e-51 | -8.615850e-47 |
| Msa1129980 | Msa1433710 | 0.803573 | 3.268486e-49 | -8.615850e-47 |
| Msa1139810 | Msa1433710 | 0.814708 | 1.342447e-51 | -8.615850e-47 |
| Msa1201650 | Msa1433710 | 0.805254 | 1.458593e-49 | -8.615850e-47 |
| Msa0507680 | Msa1433710 | 0.805221 | 1.482057e-49 | -8.615850e-47 |
| Msa0527550 | Msa1433710 | 0.802139 | 6.464055e-49 | -8.615850e-47 |
| Msa0566030 | Msa1433710 | 0.813374 | 2.644264e-51 | -8.615850e-47 |
| Msa0863370 | Msa1433710 | 0.808807 | 2.583217e-50 | -8.615850e-47 |
| Msa0863870 | Msa1433710 | 0.812493 | 4.124786e-51 | -8.615850e-47 |
| Msa0864630 | Msa1433710 | 0.800944 | 1.136269e-48 | -8.615850e-47 |
| Msa0880140 | Msa1433710 | 0.823386 | 1.424660e-53 | -8.615850e-47 |
| Msa0896970 | Msa1433710 | 0.800383 | 1.478917e-48 | -8.615850e-47 |
| Msa0930780 | Msa1433710 | 0.800698 | 1.275325e-48 | -8.615850e-47 |
| Msa0936340 | Msa1433710 | 0.803503 | 3.380109e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433710 | MtrunA17_Chr2g0316511 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 1.50e-165 | 454 |
| Msa1433710 | MtrunA17_Chr3g0145031 | 67.123 | 219 | 68 | 3 | 1 | 216 | 1 | 218 | 4.55e-111 | 317 |
| Msa1433710 | MtrunA17_Chr2g0324381 | 64.398 | 191 | 63 | 3 | 1 | 189 | 10 | 197 | 4.82e-81 | 240 |
| Msa1433710 | MtrunA17_Chr3g0145041 | 57.513 | 193 | 78 | 2 | 24 | 216 | 8 | 196 | 1.16e-79 | 236 |
| Msa1433710 | MtrunA17_Chr5g0447451 | 48.819 | 127 | 55 | 5 | 71 | 187 | 15 | 141 | 1.98e-33 | 117 |
| Msa1433710 | MtrunA17_Chr2g0324361 | 57.576 | 99 | 39 | 2 | 25 | 123 | 12 | 107 | 9.70e-33 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1433710 | AT4G22140.2 | 84.375 | 224 | 27 | 1 | 1 | 216 | 1 | 224 | 8.57e-144 | 400 |
| Msa1433710 | AT4G22140.1 | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.56e-139 | 389 |
| Msa1433710 | AT4G22140.3 | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.56e-139 | 389 |
| Msa1433710 | AT4G04260.2 | 75.543 | 184 | 43 | 2 | 26 | 208 | 9 | 191 | 9.06e-97 | 281 |
| Msa1433710 | AT4G39100.1 | 62.150 | 214 | 78 | 2 | 1 | 213 | 1 | 212 | 1.29e-96 | 281 |
| Msa1433710 | AT4G04260.1 | 74.860 | 179 | 43 | 2 | 31 | 208 | 1 | 178 | 1.67e-92 | 269 |
| Msa1433710 | AT4G39100.2 | 67.485 | 163 | 52 | 1 | 1 | 162 | 1 | 163 | 2.16e-81 | 240 |
| Msa1433710 | AT4G04260.3 | 76.429 | 140 | 32 | 1 | 1 | 139 | 1 | 140 | 4.69e-73 | 218 |
Find 69 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCTTTCTGAACAGAAAA+AGG | 0.288644 | tig0027420:+24657 | Msa1433710:intergenic |
| TATCGAAGAAGCAAAGAAAT+TGG | 0.293372 | tig0027420:-26514 | Msa1433710:CDS |
| AGGTTTGAAAATGGTGAAAA+AGG | 0.319346 | tig0027420:+28119 | Msa1433710:intergenic |
| GGAACAAACAAGGTTGTTAA+AGG | 0.327215 | tig0027420:-27982 | Msa1433710:intron |
| ATTAGGTCATCCGGGTTATA+AGG | 0.334913 | tig0027420:+27269 | Msa1433710:intergenic |
| CTTCCACCAATAGATTCTTC+AGG | 0.349796 | tig0027420:+27631 | Msa1433710:intergenic |
| CACTGCACCATTAGGTCATC+CGG | 0.369370 | tig0027420:+27260 | Msa1433710:intergenic |
| TAAGGTTTGAGGTTTGAAAA+TGG | 0.384703 | tig0027420:+28110 | Msa1433710:intergenic |
| CTATCAGATCCTGGTGATAC+AGG | 0.385003 | tig0027420:+26429 | Msa1433710:intergenic |
| TAAAGAGTGAATGAAACCTT+AGG | 0.390761 | tig0027420:-28200 | Msa1433710:five_prime_UTR |
| AACATTCAGAACAAACAAAA+TGG | 0.403224 | tig0027420:+26490 | Msa1433710:intergenic |
| AGAAGATCGAGCAAGATAAT+AGG | 0.403757 | tig0027420:-27690 | Msa1433710:CDS |
| TGCTGAAATGCTAAGGTTTG+AGG | 0.409965 | tig0027420:+28099 | Msa1433710:intergenic |
| GTTCTGAGGATTACTATTGT+AGG | 0.415271 | tig0027420:-27483 | Msa1433710:CDS |
| ACCCTTCACACTGCACCATT+AGG | 0.433071 | tig0027420:+27252 | Msa1433710:intergenic |
| TGATGCAGAAATGCAACTTT+TGG | 0.433600 | tig0027420:-24828 | Msa1433710:three_prime_UTR |
| TCAAGGTTTGATGTTATCTC+AGG | 0.436239 | tig0027420:+24619 | Msa1433710:intergenic |
| GGTGGAAGAAGACAGTTTCA+TGG | 0.437599 | tig0027420:-27616 | Msa1433710:CDS |
| CAAAGTGCTCACACTATTGA+AGG | 0.439100 | tig0027420:-27556 | Msa1433710:CDS |
| TTATAACCCGGATGACCTAA+TGG | 0.443180 | tig0027420:-27267 | Msa1433710:CDS |
| TATGAGCGTGACGATTCATT+TGG | 0.452589 | tig0027420:+28226 | Msa1433710:intergenic |
| TGTTGTTGTACAACTTTCAC+CGG | 0.462354 | tig0027420:-24780 | Msa1433710:three_prime_UTR |
| TTGTACAACTTTCACCGGAT+TGG | 0.467529 | tig0027420:-24775 | Msa1433710:three_prime_UTR |
| GGTCCTCTCTTTCGCCGCTT+CGG | 0.470540 | tig0027420:+24852 | Msa1433710:intergenic |
| CTCACCTTGCTATCAGATCC+TGG | 0.485170 | tig0027420:+26420 | Msa1433710:intergenic |
| CTTCTCCACACGTGCCACAT+AGG | 0.490109 | tig0027420:+27708 | Msa1433710:intergenic |
| GAGCACTTTGAACATCAAAA+TGG | 0.494985 | tig0027420:+27569 | Msa1433710:intergenic |
| TATAGACCTGAAGAATCTAT+TGG | 0.496809 | tig0027420:-27637 | Msa1433710:CDS |
| AAAGTTGCATTTCTGCATCA+TGG | 0.501663 | tig0027420:+24831 | Msa1433710:intergenic |
| TAGGTACCATCCTGCTTGTG+TGG | 0.503860 | tig0027420:-26544 | Msa1433710:CDS |
| ACTCACACAGCAACACGGTC+AGG | 0.504648 | tig0027420:+27427 | Msa1433710:intergenic |
| TTTGAGTATAAAGCTGCTAC+TGG | 0.508499 | tig0027420:-27460 | Msa1433710:CDS |
| TTCTCCACACGTGCCACATA+GGG | 0.531360 | tig0027420:+27709 | Msa1433710:intergenic |
| GAGCCGAAGCGGCGAAAGAG+AGG | 0.538999 | tig0027420:-24855 | Msa1433710:CDS |
| AAAGAGTGAATGAAACCTTA+GGG | 0.541136 | tig0027420:-28199 | Msa1433710:five_prime_UTR |
| CACATGGCGAAGACAAGACC+AGG | 0.545829 | tig0027420:-28036 | Msa1433710:CDS |
| TATACTAAGCTTGAGAATGT+AGG | 0.549874 | tig0027420:-27505 | Msa1433710:CDS |
| AAAGGGTTGCTGAAATGCTA+AGG | 0.550212 | tig0027420:+28092 | Msa1433710:intergenic |
| AAGACAGTTTCATGGAGCTA+AGG | 0.559466 | tig0027420:-27608 | Msa1433710:CDS |
| GACCTAATGGTGCAGTGTGA+AGG | 0.564361 | tig0027420:-27254 | Msa1433710:CDS |
| AAGATAATAGGAACAATGTG+AGG | 0.571957 | tig0027420:-27678 | Msa1433710:CDS |
| GCTTGAGAATGTAGGTTCTG+AGG | 0.572249 | tig0027420:-27497 | Msa1433710:CDS |
| ATAGTCATGCCCACACAAGC+AGG | 0.572617 | tig0027420:+26534 | Msa1433710:intergenic |
| CACGAGTAAGCCACCCTATG+TGG | 0.577004 | tig0027420:-27722 | Msa1433710:CDS |
| AGAAGAACAGAGGAACCCTA+AGG | 0.584772 | tig0027420:+28184 | Msa1433710:intergenic |
| AGTGTGAAGGGTGCAAGGAT+TGG | 0.587494 | tig0027420:-27241 | Msa1433710:intron |
| GCCACCCTATGTGGCACGTG+TGG | 0.588251 | tig0027420:-27713 | Msa1433710:CDS |
| ATGCGAGATGCCTTATAACC+CGG | 0.597197 | tig0027420:-27279 | Msa1433710:CDS |
| TCCACACGTGCCACATAGGG+TGG | 0.599622 | tig0027420:+27712 | Msa1433710:intergenic |
| AGACCTGAAGAATCTATTGG+TGG | 0.602382 | tig0027420:-27634 | Msa1433710:CDS |
| ACCTAATGGTGCAGTGTGAA+GGG | 0.605001 | tig0027420:-27253 | Msa1433710:CDS |
| ACTGCACCATTAGGTCATCC+GGG | 0.612849 | tig0027420:+27261 | Msa1433710:intergenic |
| CGATGATTTGAAGAAACCAC+AGG | 0.614767 | tig0027420:-26460 | Msa1433710:CDS |
| AGGTACCATCCTGCTTGTGT+GGG | 0.617835 | tig0027420:-26543 | Msa1433710:CDS |
| CACAATCAGAGGAACAAACA+AGG | 0.620724 | tig0027420:-27992 | Msa1433710:CDS |
| GCGGCGTTTCCTGTATCACC+AGG | 0.621923 | tig0027420:-26438 | Msa1433710:CDS |
| ATCACCAGGATCTGATAGCA+AGG | 0.624737 | tig0027420:-26424 | Msa1433710:intron |
| ATGTGAGGGTTCGTGTGAGA+TGG | 0.629136 | tig0027420:-27663 | Msa1433710:CDS |
| GATACAGGAAACGCCGCCTG+TGG | 0.630270 | tig0027420:+26444 | Msa1433710:intergenic |
| GGTGGCTTACTCGTGTCAGA+AGG | 0.633090 | tig0027420:+27730 | Msa1433710:intergenic |
| AAAGTGCTCACACTATTGAA+GGG | 0.633847 | tig0027420:-27555 | Msa1433710:CDS |
| ACACAAAATAGCTACCACAT+AGG | 0.637061 | tig0027420:+24800 | Msa1433710:intergenic |
| ATGGACTCATACACAATCAG+AGG | 0.637106 | tig0027420:-28003 | Msa1433710:CDS |
| GGTGCAGTGTGAAGGGTGCA+AGG | 0.638726 | tig0027420:-27246 | Msa1433710:CDS |
| TGCGTTAAGAAGAAGAACAG+AGG | 0.645756 | tig0027420:+28174 | Msa1433710:intergenic |
| AGATAATAGGAACAATGTGA+GGG | 0.647787 | tig0027420:-27677 | Msa1433710:CDS |
| TCATGCCCACACAAGCAGGA+TGG | 0.663384 | tig0027420:+26538 | Msa1433710:intergenic |
| GAGAGACTCAAACACACACA+TGG | 0.668411 | tig0027420:-28052 | Msa1433710:exon |
| TGATTTGAAGAAACCACAGG+CGG | 0.754665 | tig0027420:-26457 | Msa1433710:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTCTAATTAAAATT+TGG | - | tig0027420:26540-26559 | Msa1433710:CDS | 10.0% |
| !! | TTGAAAAAAAATAACATATA+TGG | - | tig0027420:26908-26927 | Msa1433710:intron | 10.0% |
| !! | ATCAAATTTACAAAAATTTA+CGG | + | tig0027420:27140-27159 | Msa1433710:intergenic | 10.0% |
| !!! | TTTAAATTTTGTGTTTTTTG+AGG | - | tig0027420:24958-24977 | Msa1433710:intron | 15.0% |
| !!! | ATTTAGTTCTAAATATTATG+AGG | - | tig0027420:26393-26412 | Msa1433710:intron | 15.0% |
| !!! | AAAGAATTTTGAGAAAAAAA+CGG | + | tig0027420:26611-26630 | Msa1433710:intergenic | 15.0% |
| !!! | ACCTTTATAAATTTTAAATG+TGG | - | tig0027420:26728-26747 | Msa1433710:intron | 15.0% |
| !!! | ACCACATTTAAAATTTATAA+AGG | + | tig0027420:26732-26751 | Msa1433710:intergenic | 15.0% |
| !! | TCAAATTTACAAAAATTTAC+GGG | + | tig0027420:27139-27158 | Msa1433710:intergenic | 15.0% |
| !!! | ATTTTGTGAGTAATAAATAA+TGG | - | tig0027420:27728-27747 | Msa1433710:CDS | 15.0% |
| !!! | TTTTTCACTTAAAATATTCA+AGG | + | tig0027420:28170-28189 | Msa1433710:intergenic | 15.0% |
| !!! | TGAATATTTTAAGTGAAAAA+TGG | - | tig0027420:28170-28189 | Msa1433710:five_prime_UTR | 15.0% |
| !!! | TTTTGAATAATTTGCTGATT+TGG | - | tig0027420:25442-25461 | Msa1433710:intron | 20.0% |
| !! | CAAATGCTAAAATTAGATAT+CGG | + | tig0027420:25605-25624 | Msa1433710:intergenic | 20.0% |
| !!! | TTTTGATGAATGAATATATG+TGG | - | tig0027420:25646-25665 | Msa1433710:intron | 20.0% |
| !!! | AATTTTAGCTCTTGTATTAA+CGG | + | tig0027420:25870-25889 | Msa1433710:intergenic | 20.0% |
| !!! | GTTTATTTTTTCCAATCTAT+AGG | - | tig0027420:25998-26017 | Msa1433710:intron | 20.0% |
| !! | TCATAAATTGAATTATGCAA+GGG | - | tig0027420:26021-26040 | Msa1433710:intron | 20.0% |
| !!! | GCAAAAGATTATTGAATTTT+TGG | - | tig0027420:26105-26124 | Msa1433710:intron | 20.0% |
| !! | TACCTTTCATAAAATATAGA+GGG | + | tig0027420:26180-26199 | Msa1433710:intergenic | 20.0% |
| !! | TAATCAGTAGTTAATATCTA+GGG | - | tig0027420:27217-27236 | Msa1433710:intron | 20.0% |
| !! | TTATATTTAAGCTTATCTGA+TGG | - | tig0027420:27256-27275 | Msa1433710:CDS | 20.0% |
| !!! | GTTGTTTTTATAAGCAATAT+TGG | + | tig0027420:27373-27392 | Msa1433710:intergenic | 20.0% |
| !!! | TCAAGTTTTTTATTCCTTTT+TGG | - | tig0027420:27763-27782 | Msa1433710:intron | 20.0% |
| !!! | ACATAATCTCTTTTAATCAA+TGG | - | tig0027420:27786-27805 | Msa1433710:intron | 20.0% |
| !!! | ATTATTTTGATTGACACTAT+AGG | - | tig0027420:27832-27851 | Msa1433710:intron | 20.0% |
| !!! | TTATTTTGATTGACACTATA+GGG | - | tig0027420:27833-27852 | Msa1433710:intron | 20.0% |
| !! | TTTTATGAACCCTAAAATTG+TGG | + | tig0027420:24624-24643 | Msa1433710:intergenic | 25.0% |
| !! | CTTCAAAATCGTTTCTTTTA+TGG | - | tig0027420:24871-24890 | Msa1433710:intron | 25.0% |
| ! | AGAAATGTGTAAAACTATGT+GGG | - | tig0027420:24906-24925 | Msa1433710:intron | 25.0% |
| !! | GTTTAGATTCAAGAAAGTTT+TGG | - | tig0027420:24933-24952 | Msa1433710:intron | 25.0% |
| ! | AATAAAGAACCAAAAACGAA+AGG | + | tig0027420:25380-25399 | Msa1433710:intergenic | 25.0% |
| ! | CAAATACTCAAAACTCAATT+AGG | + | tig0027420:25405-25424 | Msa1433710:intergenic | 25.0% |
| !!! | TTTGAGTATTTGATTTGATG+AGG | - | tig0027420:25413-25432 | Msa1433710:intron | 25.0% |
| !!! | CGATATCTAATTTTAGCATT+TGG | - | tig0027420:25603-25622 | Msa1433710:intron | 25.0% |
| ! | TGTAATACATTCTCTGTTAT+TGG | - | tig0027420:25747-25766 | Msa1433710:intron | 25.0% |
| ! | AAAGTAAAACAGATAAATGC+TGG | - | tig0027420:25813-25832 | Msa1433710:intron | 25.0% |
| ! | TTCAAACAACGAAAAACAAT+TGG | + | tig0027420:25911-25930 | Msa1433710:intergenic | 25.0% |
| ! | TCAATTTATGACCTATAGAT+TGG | + | tig0027420:26012-26031 | Msa1433710:intergenic | 25.0% |
| ! | GTCATAAATTGAATTATGCA+AGG | - | tig0027420:26020-26039 | Msa1433710:intron | 25.0% |
| !!! | ATATGCTATATTGGCTTTTT+AGG | - | tig0027420:26143-26162 | Msa1433710:intron | 25.0% |
| !! | TTCCCTCTATATTTTATGAA+AGG | - | tig0027420:26175-26194 | Msa1433710:intron | 25.0% |
| ! | GTACCTTTCATAAAATATAG+AGG | + | tig0027420:26181-26200 | Msa1433710:intergenic | 25.0% |
| ! | AACATTCAGAACAAACAAAA+TGG | + | tig0027420:26282-26301 | Msa1433710:intergenic | 25.0% |
| ! | TTTAATCATATTGCAGCATT+AGG | + | tig0027420:26678-26697 | Msa1433710:intergenic | 25.0% |
| ! | AATGCTGCAATATGATTAAA+AGG | - | tig0027420:26678-26697 | Msa1433710:intron | 25.0% |
| ! | ATGCTGCAATATGATTAAAA+GGG | - | tig0027420:26679-26698 | Msa1433710:intron | 25.0% |
| !!! | AAATGTGGTTTTGATATCTA+TGG | - | tig0027420:26743-26762 | Msa1433710:intron | 25.0% |
| ! | ATTGACATCAGAAATTATCT+AGG | - | tig0027420:26833-26852 | Msa1433710:intron | 25.0% |
| !! | GGATAGAGTTTAAAACAAAA+GGG | + | tig0027420:27001-27020 | Msa1433710:intergenic | 25.0% |
| ! | TACCAAGGTAAAAGATAAAA+CGG | + | tig0027420:27022-27041 | Msa1433710:intergenic | 25.0% |
| ! | TGTGAAATATAGTTCGAAAA+AGG | + | tig0027420:27071-27090 | Msa1433710:intergenic | 25.0% |
| ! | GTAATCAGTAGTTAATATCT+AGG | - | tig0027420:27216-27235 | Msa1433710:intron | 25.0% |
| ! | AATCAGTAGTTAATATCTAG+GGG | - | tig0027420:27218-27237 | Msa1433710:intron | 25.0% |
| !! | ATTCTAACAATTTGAAGCTT+TGG | - | tig0027420:27597-27616 | Msa1433710:CDS | 25.0% |
| !! | TTTGGTGATCTGATAAAATA+AGG | - | tig0027420:27620-27639 | Msa1433710:CDS | 25.0% |
| !! | TTGGTGATCTGATAAAATAA+GGG | - | tig0027420:27621-27640 | Msa1433710:CDS | 25.0% |
| !! | TGGCTTTTACAAGAAAATAA+AGG | + | tig0027420:27695-27714 | Msa1433710:intergenic | 25.0% |
| ! | TTGTGAGTAATAAATAATGG+AGG | - | tig0027420:27731-27750 | Msa1433710:CDS | 25.0% |
| ! | AAAAGAGATTATGTCCAAAA+AGG | + | tig0027420:27780-27799 | Msa1433710:intergenic | 25.0% |
| ! | AGAAAAAGGAAACACATAAA+TGG | + | tig0027420:28101-28120 | Msa1433710:intergenic | 25.0% |
| ! | TAATCTTTCTGAACAGAAAA+AGG | + | tig0027420:28115-28134 | Msa1433710:intergenic | 25.0% |
| TAAAGAGTGAATGAAACCTT+AGG | - | tig0027420:24569-24588 | Msa1433710:three_prime_UTR | 30.0% | |
| AAAGAGTGAATGAAACCTTA+GGG | - | tig0027420:24570-24589 | Msa1433710:three_prime_UTR | 30.0% | |
| ! | TAACGCAAAACCACAATTTT+AGG | - | tig0027420:24611-24630 | Msa1433710:three_prime_UTR | 30.0% |
| ! | AACGCAAAACCACAATTTTA+GGG | - | tig0027420:24612-24631 | Msa1433710:three_prime_UTR | 30.0% |
| AGGTTTGAAAATGGTGAAAA+AGG | + | tig0027420:24653-24672 | Msa1433710:intergenic | 30.0% | |
| ! | TAAGGTTTGAGGTTTGAAAA+TGG | + | tig0027420:24662-24681 | Msa1433710:intergenic | 30.0% |
| !!! | TAAGCACTTTTTTCGCAAAA+GGG | + | tig0027420:24697-24716 | Msa1433710:intergenic | 30.0% |
| CAAAAACAAAAGGGTTTCAA+GGG | + | tig0027420:24828-24847 | Msa1433710:intergenic | 30.0% | |
| ACAAAAACAAAAGGGTTTCA+AGG | + | tig0027420:24829-24848 | Msa1433710:intergenic | 30.0% | |
| GAGAAATGTGTAAAACTATG+TGG | - | tig0027420:24905-24924 | Msa1433710:intron | 30.0% | |
| AAGATAATAGGAACAATGTG+AGG | - | tig0027420:25091-25110 | Msa1433710:intron | 30.0% | |
| AGATAATAGGAACAATGTGA+GGG | - | tig0027420:25092-25111 | Msa1433710:intron | 30.0% | |
| TATAGACCTGAAGAATCTAT+TGG | - | tig0027420:25132-25151 | Msa1433710:intron | 30.0% | |
| TATACTAAGCTTGAGAATGT+AGG | - | tig0027420:25264-25283 | Msa1433710:intron | 30.0% | |
| TCAATCTTTATCGTTCTTCT+AGG | + | tig0027420:25683-25702 | Msa1433710:intergenic | 30.0% | |
| AACAGATAAATGCTGGAAAT+AGG | - | tig0027420:25820-25839 | Msa1433710:intron | 30.0% | |
| ACAGATAAATGCTGGAAATA+GGG | - | tig0027420:25821-25840 | Msa1433710:intron | 30.0% | |
| AAACAACGAAAAACAATTGG+AGG | + | tig0027420:25908-25927 | Msa1433710:intergenic | 30.0% | |
| TGAGAAGTCATATGCTATAT+TGG | - | tig0027420:26134-26153 | Msa1433710:intron | 30.0% | |
| ! | TCATTTTGTAGGTTTCTTGT+AGG | - | tig0027420:26206-26225 | Msa1433710:intron | 30.0% |
| TATCGAAGAAGCAAAGAAAT+TGG | - | tig0027420:26255-26274 | Msa1433710:intron | 30.0% | |
| ATTGTGTGTTTCTTCATTCT+TGG | - | tig0027420:26567-26586 | Msa1433710:intron | 30.0% | |
| ! | CGGATAGAGTTTAAAACAAA+AGG | + | tig0027420:27002-27021 | Msa1433710:intergenic | 30.0% |
| ! | ATCCGTTTTATCTTTTACCT+TGG | - | tig0027420:27017-27036 | Msa1433710:intron | 30.0% |
| GAAATATAGTTCGAAAAAGG+AGG | + | tig0027420:27068-27087 | Msa1433710:intergenic | 30.0% | |
| TTATGTCAAACAACTCAAAC+AGG | + | tig0027420:27186-27205 | Msa1433710:intergenic | 30.0% | |
| AAATATAAGCCAATCCAAAC+AGG | + | tig0027420:27244-27263 | Msa1433710:intergenic | 30.0% | |
| ! | TTATCTGATGGCATAAGTTT+TGG | - | tig0027420:27268-27287 | Msa1433710:CDS | 30.0% |
| ! | TATCTGATGGCATAAGTTTT+GGG | - | tig0027420:27269-27288 | Msa1433710:CDS | 30.0% |
| !! | AAGATCATTTAGGGTCTTTT+CGG | + | tig0027420:27525-27544 | Msa1433710:intergenic | 30.0% |
| ! | AAAGACCCTAAATGATCTTT+TGG | - | tig0027420:27526-27545 | Msa1433710:CDS | 30.0% |
| CACTACCAAAAGATCATTTA+GGG | + | tig0027420:27534-27553 | Msa1433710:intergenic | 30.0% | |
| ! | AACAATTTGAAGCTTTGGTT+TGG | - | tig0027420:27602-27621 | Msa1433710:CDS | 30.0% |
| TGGTGATCTGATAAAATAAG+GGG | - | tig0027420:27622-27641 | Msa1433710:CDS | 30.0% | |
| ACAAAATGAACACTGCTTAA+TGG | + | tig0027420:27715-27734 | Msa1433710:intergenic | 30.0% | |
| TAAAAACATTGCATCCAATC+CGG | + | tig0027420:28011-28030 | Msa1433710:intergenic | 30.0% | |
| !!! | TTTATTTTGACAGCAAGTCT+CGG | - | tig0027420:28037-28056 | Msa1433710:exon | 30.0% |
| !!! | CTAAGCACTTTTTTCGCAAA+AGG | + | tig0027420:24698-24717 | Msa1433710:intergenic | 35.0% |
| GGAACAAACAAGGTTGTTAA+AGG | - | tig0027420:24787-24806 | Msa1433710:three_prime_UTR | 35.0% | |
| TTGAAGATGTTTCCTCAACT+GGG | + | tig0027420:24857-24876 | Msa1433710:intergenic | 35.0% | |
| TTTGAAGATGTTTCCTCAAC+TGG | + | tig0027420:24858-24877 | Msa1433710:intergenic | 35.0% | |
| !!! | TGTTTTGTTGTTGTTGTAGC+TGG | - | tig0027420:24997-25016 | Msa1433710:intron | 35.0% |
| AGAAGATCGAGCAAGATAAT+AGG | - | tig0027420:25079-25098 | Msa1433710:intron | 35.0% | |
| GAGCACTTTGAACATCAAAA+TGG | + | tig0027420:25203-25222 | Msa1433710:intergenic | 35.0% | |
| ! | AAAGTGCTCACACTATTGAA+GGG | - | tig0027420:25214-25233 | Msa1433710:intron | 35.0% |
| !! | GTTCTGAGGATTACTATTGT+AGG | - | tig0027420:25286-25305 | Msa1433710:intron | 35.0% |
| TTTGAGTATAAAGCTGCTAC+TGG | - | tig0027420:25309-25328 | Msa1433710:intron | 35.0% | |
| AAAAAACTCACACAGCAACA+CGG | + | tig0027420:25350-25369 | Msa1433710:intergenic | 35.0% | |
| !! | TTGCTTTAGCCTTTCGTTTT+TGG | - | tig0027420:25368-25387 | Msa1433710:intron | 35.0% |
| CTTTATCAAACATCTCCCTA+GGG | + | tig0027420:25718-25737 | Msa1433710:intergenic | 35.0% | |
| ACTTTATCAAACATCTCCCT+AGG | + | tig0027420:25719-25738 | Msa1433710:intergenic | 35.0% | |
| ACTTTAACTGAACAAGCAGA+AGG | + | tig0027420:25798-25817 | Msa1433710:intergenic | 35.0% | |
| ! | GTTGTTTGAAATGAAACTGC+TGG | - | tig0027420:25921-25940 | Msa1433710:intron | 35.0% |
| ! | GCTCAAAGTCAAGATCTTTT+AGG | + | tig0027420:25972-25991 | Msa1433710:intergenic | 35.0% |
| ! | AGGTACACACTTCATTTTGT+AGG | - | tig0027420:26195-26214 | Msa1433710:intron | 35.0% |
| !! | TATGAGGCATTCTTTTGCTT+TGG | - | tig0027420:26409-26428 | Msa1433710:intron | 35.0% |
| TTTCTTCATTCTTGGTACCA+TGG | - | tig0027420:26575-26594 | Msa1433710:intron | 35.0% | |
| ATCAAGCACAAGAATTACCA+AGG | + | tig0027420:27037-27056 | Msa1433710:intergenic | 35.0% | |
| TCAAACAGGTTATCAATAGC+GGG | + | tig0027420:27172-27191 | Msa1433710:intergenic | 35.0% | |
| CTCAAACAGGTTATCAATAG+CGG | + | tig0027420:27173-27192 | Msa1433710:intergenic | 35.0% | |
| !!! | ATAAGTTTTGGGAGTCTGTT+TGG | - | tig0027420:27280-27299 | Msa1433710:CDS | 35.0% |
| !!! | TAAGTTTTGGGAGTCTGTTT+GGG | - | tig0027420:27281-27300 | Msa1433710:CDS | 35.0% |
| CCACTACCAAAAGATCATTT+AGG | + | tig0027420:27535-27554 | Msa1433710:intergenic | 35.0% | |
| ! | CCTAAATGATCTTTTGGTAG+TGG | - | tig0027420:27532-27551 | Msa1433710:CDS | 35.0% |
| ! | GAACAATGCTTGAATTTTGC+AGG | - | tig0027420:27889-27908 | Msa1433710:intron | 35.0% |
| AAAGTTGCATTTCTGCATCA+TGG | + | tig0027420:27941-27960 | Msa1433710:intergenic | 35.0% | |
| ! | TGATGCAGAAATGCAACTTT+TGG | - | tig0027420:27941-27960 | Msa1433710:intron | 35.0% |
| ACACAAAATAGCTACCACAT+AGG | + | tig0027420:27972-27991 | Msa1433710:intergenic | 35.0% | |
| TGTTGTTGTACAACTTTCAC+CGG | - | tig0027420:27989-28008 | Msa1433710:CDS | 35.0% | |
| !!! | TTATTTTGACAGCAAGTCTC+GGG | - | tig0027420:28038-28057 | Msa1433710:exon | 35.0% |
| TCAAGGTTTGATGTTATCTC+AGG | + | tig0027420:28153-28172 | Msa1433710:intergenic | 35.0% | |
| TATGAGCGTGACGATTCATT+TGG | + | tig0027420:24546-24565 | Msa1188110:intergenic | 40.0% | |
| TGCGTTAAGAAGAAGAACAG+AGG | + | tig0027420:24598-24617 | Msa1433710:intergenic | 40.0% | |
| TGCTGAAATGCTAAGGTTTG+AGG | + | tig0027420:24673-24692 | Msa1433710:intergenic | 40.0% | |
| AAAGGGTTGCTGAAATGCTA+AGG | + | tig0027420:24680-24699 | Msa1433710:intergenic | 40.0% | |
| GAAGACAAGACCAGGAAAAA+AGG | - | tig0027420:24741-24760 | Msa1433710:three_prime_UTR | 40.0% | |
| AAGACCAGGAAAAAAGGACA+TGG | - | tig0027420:24747-24766 | Msa1433710:three_prime_UTR | 40.0% | |
| ATGGACTCATACACAATCAG+AGG | - | tig0027420:24766-24785 | Msa1433710:three_prime_UTR | 40.0% | |
| CACAATCAGAGGAACAAACA+AGG | - | tig0027420:24777-24796 | Msa1433710:three_prime_UTR | 40.0% | |
| GGGTCGGTACAAAAACAAAA+GGG | + | tig0027420:24837-24856 | Msa1433710:intergenic | 40.0% | |
| TGGGTCGGTACAAAAACAAA+AGG | + | tig0027420:24838-24857 | Msa1433710:intergenic | 40.0% | |
| AGACCTGAAGAATCTATTGG+TGG | - | tig0027420:25135-25154 | Msa1433710:intron | 40.0% | |
| CTTCCACCAATAGATTCTTC+AGG | + | tig0027420:25141-25160 | Msa1433710:intergenic | 40.0% | |
| AAGACAGTTTCATGGAGCTA+AGG | - | tig0027420:25161-25180 | Msa1433710:intron | 40.0% | |
| ! | CAAAGTGCTCACACTATTGA+AGG | - | tig0027420:25213-25232 | Msa1433710:intron | 40.0% |
| ATTAGGTCATCCGGGTTATA+AGG | + | tig0027420:25503-25522 | Msa1433710:intergenic | 40.0% | |
| TTATAACCCGGATGACCTAA+TGG | - | tig0027420:25502-25521 | Msa1433710:intron | 40.0% | |
| ! | TTTATCGTTCTTCTAGGAGC+TGG | + | tig0027420:25677-25696 | Msa1433710:intergenic | 40.0% |
| TTGAACAAAGACTTAGCCCT+AGG | - | tig0027420:25699-25718 | Msa1433710:intron | 40.0% | |
| TGAACAAAGACTTAGCCCTA+GGG | - | tig0027420:25700-25719 | Msa1433710:intron | 40.0% | |
| AATGCTGGAAATAGGGAACA+TGG | - | tig0027420:25828-25847 | Msa1433710:intron | 40.0% | |
| ATGCTGGAAATAGGGAACAT+GGG | - | tig0027420:25829-25848 | Msa1433710:intron | 40.0% | |
| CGATGATTTGAAGAAACCAC+AGG | - | tig0027420:26309-26328 | Msa1433710:intron | 40.0% | |
| TGATTTGAAGAAACCACAGG+CGG | - | tig0027420:26312-26331 | Msa1433710:intron | 40.0% | |
| TTTGCTTTGGCCCTTTGATA+CGG | - | tig0027420:26422-26441 | Msa1433710:intron | 40.0% | |
| !! | AAAACGGATTACGCTAACCA+TGG | + | tig0027420:26595-26614 | Msa1433710:intergenic | 40.0% |
| ATAACATATATGGCCCCAAC+CGG | - | tig0027420:26918-26937 | Msa1433710:intron | 40.0% | |
| GCATTTGACTGCAGATCAAA+AGG | + | tig0027420:26959-26978 | Msa1433710:intergenic | 40.0% | |
| AATGCTCTACTACTGAGCTA+TGG | - | tig0027420:26974-26993 | Msa1433710:intron | 40.0% | |
| TTAATATCTAGGGGCCTGTT+TGG | - | tig0027420:27227-27246 | Msa1433710:intron | 40.0% | |
| ! | CAATGCTTGAATTTTGCAGG+TGG | - | tig0027420:27892-27911 | Msa1433710:intron | 40.0% |
| ! | TGCAGAAATGCAACTTTTGG+TGG | - | tig0027420:27944-27963 | Msa1433710:intron | 40.0% |
| TTGTACAACTTTCACCGGAT+TGG | - | tig0027420:27994-28013 | Msa1433710:CDS | 40.0% | |
| AGAAGAACAGAGGAACCCTA+AGG | + | tig0027420:24588-24607 | Msa1433710:intergenic | 45.0% | |
| GAGAGACTCAAACACACACA+TGG | - | tig0027420:24717-24736 | Msa1433710:three_prime_UTR | 45.0% | |
| !!! | GAGTCCATGTCCTTTTTTCC+TGG | + | tig0027420:24754-24773 | Msa1433710:intergenic | 45.0% |
| !! | TTTTTGTACCGACCCAGTTG+AGG | - | tig0027420:24842-24861 | Msa1433710:exon | 45.0% |
| AGATGTTTCCTCAACTGGGT+CGG | + | tig0027420:24853-24872 | Msa1433710:intergenic | 45.0% | |
| GGTGGAAGAAGACAGTTTCA+TGG | - | tig0027420:25153-25172 | Msa1433710:intron | 45.0% | |
| GCTTGAGAATGTAGGTTCTG+AGG | - | tig0027420:25272-25291 | Msa1433710:intron | 45.0% | |
| ATGCGAGATGCCTTATAACC+CGG | - | tig0027420:25490-25509 | Msa1433710:intron | 45.0% | |
| ACCTAATGGTGCAGTGTGAA+GGG | - | tig0027420:25516-25535 | Msa1433710:intron | 45.0% | |
| CTGTTATTGGAACTCTGTCC+CGG | - | tig0027420:25760-25779 | Msa1433710:intron | 45.0% | |
| CTATCAGATCCTGGTGATAC+AGG | + | tig0027420:26343-26362 | Msa1433710:intergenic | 45.0% | |
| ATCACCAGGATCTGATAGCA+AGG | - | tig0027420:26345-26364 | Msa1433710:intron | 45.0% | |
| TTGCTTTGGCCCTTTGATAC+GGG | - | tig0027420:26423-26442 | Msa1433710:intron | 45.0% | |
| CTGTGATAGCCCGTATCAAA+GGG | + | tig0027420:26435-26454 | Msa1433710:intergenic | 45.0% | |
| TCTGTGATAGCCCGTATCAA+AGG | + | tig0027420:26436-26455 | Msa1433710:intergenic | 45.0% | |
| TAACATATATGGCCCCAACC+GGG | - | tig0027420:26919-26938 | Msa1433710:intron | 45.0% | |
| ! | AGATCAAAAGGTCACCGGTT+CGG | + | tig0027420:26947-26966 | Msa1433710:intergenic | 45.0% |
| ACTGCAGATCAAAAGGTCAC+CGG | + | tig0027420:26952-26971 | Msa1433710:intergenic | 45.0% | |
| !!! | AACTTTTGGTGGTGCCTATG+TGG | - | tig0027420:27955-27974 | Msa1433710:intron | 45.0% |
| TTCTCCACACGTGCCACATA+GGG | + | tig0027420:25063-25082 | Msa1433710:intergenic | 50.0% | |
| ATGTGAGGGTTCGTGTGAGA+TGG | - | tig0027420:25106-25125 | Msa1433710:intron | 50.0% | |
| ACTGCACCATTAGGTCATCC+GGG | + | tig0027420:25511-25530 | Msa1433710:intergenic | 50.0% | |
| CACTGCACCATTAGGTCATC+CGG | + | tig0027420:25512-25531 | Msa1433710:intergenic | 50.0% | |
| GACCTAATGGTGCAGTGTGA+AGG | - | tig0027420:25515-25534 | Msa1433710:intron | 50.0% | |
| ACCCTTCACACTGCACCATT+AGG | + | tig0027420:25520-25539 | Msa1433710:intergenic | 50.0% | |
| ! | AGTGTGAAGGGTGCAAGGAT+TGG | - | tig0027420:25528-25547 | Msa1433710:intron | 50.0% |
| ! | CAAGCAGAAGGCTTTGTCCT+AGG | + | tig0027420:25786-25805 | Msa1433710:intergenic | 50.0% |
| TAGGTACCATCCTGCTTGTG+TGG | - | tig0027420:26225-26244 | Msa1433710:intron | 50.0% | |
| AGGTACCATCCTGCTTGTGT+GGG | - | tig0027420:26226-26245 | Msa1433710:intron | 50.0% | |
| ATAGTCATGCCCACACAAGC+AGG | + | tig0027420:26238-26257 | Msa1433710:intergenic | 50.0% | |
| ! | CTCACCTTGCTATCAGATCC+TGG | + | tig0027420:26352-26371 | Msa1433710:intergenic | 50.0% |
| ATCTAGGGGCCTGTTTGGAT+TGG | - | tig0027420:27232-27251 | Msa1433710:intron | 50.0% | |
| CACATGGCGAAGACAAGACC+AGG | - | tig0027420:24733-24752 | Msa1433710:three_prime_UTR | 55.0% | |
| GGTGGCTTACTCGTGTCAGA+AGG | + | tig0027420:25042-25061 | Msa1433710:intergenic | 55.0% | |
| CACGAGTAAGCCACCCTATG+TGG | - | tig0027420:25047-25066 | Msa1433710:intron | 55.0% | |
| CTTCTCCACACGTGCCACAT+AGG | + | tig0027420:25064-25083 | Msa1433710:intergenic | 55.0% | |
| ACTCACACAGCAACACGGTC+AGG | + | tig0027420:25345-25364 | Msa1433710:intergenic | 55.0% | |
| ! | AGAAGGCTTTGTCCTAGGCC+GGG | + | tig0027420:25781-25800 | Msa1433710:intergenic | 55.0% |
| ! | CAGAAGGCTTTGTCCTAGGC+CGG | + | tig0027420:25782-25801 | Msa1433710:intergenic | 55.0% |
| TCATGCCCACACAAGCAGGA+TGG | + | tig0027420:26234-26253 | Msa1433710:intergenic | 55.0% | |
| ! | TTTTGCAGGTGGAGCCGAAG+CGG | - | tig0027420:27903-27922 | Msa1433710:intron | 55.0% |
| TCCACACGTGCCACATAGGG+TGG | + | tig0027420:25060-25079 | Msa1433710:intergenic | 60.0% | |
| ! | GGTGCAGTGTGAAGGGTGCA+AGG | - | tig0027420:25523-25542 | Msa1433710:intron | 60.0% |
| TTGGAACTCTGTCCCGGCCT+AGG | - | tig0027420:25766-25785 | Msa1433710:intron | 60.0% | |
| GATACAGGAAACGCCGCCTG+TGG | + | tig0027420:26328-26347 | Msa1433710:intergenic | 60.0% | |
| GCGGCGTTTCCTGTATCACC+AGG | - | tig0027420:26331-26350 | Msa1433710:intron | 60.0% | |
| !! | AAGGTCACCGGTTCGGAACC+CGG | + | tig0027420:26940-26959 | Msa1433710:intergenic | 60.0% |
| GGTCCTCTCTTTCGCCGCTT+CGG | + | tig0027420:27920-27939 | Msa1433710:intergenic | 60.0% | |
| GCCACCCTATGTGGCACGTG+TGG | - | tig0027420:25056-25075 | Msa1433710:intron | 65.0% | |
| !! | ACCGGTTCGGAACCCGGTTG+GGG | + | tig0027420:26934-26953 | Msa1433710:intergenic | 65.0% |
| !! | CACCGGTTCGGAACCCGGTT+GGG | + | tig0027420:26935-26954 | Msa1433710:intergenic | 65.0% |
| !! | TCACCGGTTCGGAACCCGGT+TGG | + | tig0027420:26936-26955 | Msa1433710:intergenic | 65.0% |
| GAGCCGAAGCGGCGAAAGAG+AGG | - | tig0027420:27914-27933 | Msa1433710:intron | 65.0% | |
| GCCCCAACCGGGTTCCGAAC+CGG | - | tig0027420:26930-26949 | Msa1433710:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| tig0027420 | gene | 24542 | 28249 | 24542 | ID=Msa1433710;Name=Msa1433710 |
| tig0027420 | mRNA | 24542 | 28249 | 24542 | ID=Msa1433710-mRNA-1;Parent=Msa1433710;Name=Msa1433710-mRNA-1;_AED=0.01;_eAED=0.01;_QI=194|1|1|1|1|1|5|306|218 |
| tig0027420 | exon | 24542 | 24880 | 24542 | ID=Msa1433710-mRNA-1:exon:8779;Parent=Msa1433710-mRNA-1 |
| tig0027420 | exon | 26425 | 26563 | 26425 | ID=Msa1433710-mRNA-1:exon:8778;Parent=Msa1433710-mRNA-1 |
| tig0027420 | exon | 27242 | 27310 | 27242 | ID=Msa1433710-mRNA-1:exon:8777;Parent=Msa1433710-mRNA-1 |
| tig0027420 | exon | 27433 | 27775 | 27433 | ID=Msa1433710-mRNA-1:exon:8776;Parent=Msa1433710-mRNA-1 |
| tig0027420 | exon | 27983 | 28249 | 27983 | ID=Msa1433710-mRNA-1:exon:8775;Parent=Msa1433710-mRNA-1 |
| tig0027420 | five_prime_UTR | 28056 | 28249 | 28056 | ID=Msa1433710-mRNA-1:five_prime_utr;Parent=Msa1433710-mRNA-1 |
| tig0027420 | CDS | 27983 | 28055 | 27983 | ID=Msa1433710-mRNA-1:cds;Parent=Msa1433710-mRNA-1 |
| tig0027420 | CDS | 27433 | 27775 | 27433 | ID=Msa1433710-mRNA-1:cds;Parent=Msa1433710-mRNA-1 |
| tig0027420 | CDS | 27242 | 27310 | 27242 | ID=Msa1433710-mRNA-1:cds;Parent=Msa1433710-mRNA-1 |
| tig0027420 | CDS | 26425 | 26563 | 26425 | ID=Msa1433710-mRNA-1:cds;Parent=Msa1433710-mRNA-1 |
| tig0027420 | CDS | 24848 | 24880 | 24848 | ID=Msa1433710-mRNA-1:cds;Parent=Msa1433710-mRNA-1 |
| tig0027420 | three_prime_UTR | 24542 | 24847 | 24542 | ID=Msa1433710-mRNA-1:three_prime_utr;Parent=Msa1433710-mRNA-1 |
| Gene Sequence |
| Protein sequence |
