AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0787260

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0787260 MtrunA17_Chr5g0445011 90.584 308 19 2 1 301 1 305 0.0 560
Msa0787260 MtrunA17_Chr8g0364041 59.935 307 111 5 2 301 5 306 7.78e-129 369
Msa0787260 MtrunA17_Chr5g0415261 59.935 307 111 5 2 301 5 306 1.44e-127 365
Msa0787260 MtrunA17_Chr8g0378521 59.283 307 111 5 3 301 8 308 6.46e-127 364
Msa0787260 MtrunA17_Chr7g0268381 57.692 312 108 6 3 301 13 313 1.15e-126 363
Msa0787260 MtrunA17_Chr1g0165341 52.443 307 133 5 3 301 2 303 2.28e-111 324
Msa0787260 MtrunA17_Chr1g0190121 43.772 281 143 3 17 288 26 300 3.49e-82 251
Msa0787260 MtrunA17_Chr7g0274931 42.088 297 149 4 17 296 26 316 5.31e-81 248
Msa0787260 MtrunA17_Chr5g0436061 40.584 308 163 4 1 294 22 323 6.00e-81 248
Msa0787260 MtrunA17_Chr1g0186811 43.816 283 147 3 17 290 26 305 1.62e-79 244
Msa0787260 MtrunA17_Chr7g0272371 43.706 286 146 3 17 293 28 307 2.02e-79 243
Msa0787260 MtrunA17_Chr1g0167751 44.689 273 136 3 17 280 26 292 2.74e-79 243
Msa0787260 MtrunA17_Chr8g0387541 40.753 292 155 4 17 296 27 312 4.81e-78 240
Msa0787260 MtrunA17_Chr8g0334361 42.424 297 147 5 1 280 1 290 1.93e-77 238
Msa0787260 MtrunA17_Chr3g0097231 37.288 295 168 8 4 285 175 465 1.20e-52 179
Msa0787260 MtrunA17_Chr2g0322121 38.929 280 136 8 20 273 667 937 1.06e-47 171
Msa0787260 MtrunA17_Chr4g0025471 39.568 278 137 7 20 273 672 942 1.26e-47 171
Msa0787260 MtrunA17_Chr2g0330311 41.200 250 132 9 46 285 248 492 6.23e-47 164
Msa0787260 MtrunA17_Chr2g0330331 36.644 292 171 8 4 283 40 329 2.09e-46 159
Msa0787260 MtrunA17_Chr1g0196211 36.757 185 94 7 99 266 2 180 5.84e-25 100
Msa0787260 MtrunA17_Chr8g0369981 29.070 344 162 12 24 291 100 437 3.53e-23 99.0
Msa0787260 MtrunA17_Chr1g0196221 47.191 89 41 1 17 99 548 636 1.04e-16 80.5
Msa0787260 MtrunA17_Chr2g0330011 41.176 119 62 3 14 125 224 341 1.07e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0787260 AT5G55260.1 86.039 308 33 2 1 301 1 305 0.0 535
Msa0787260 AT4G26720.1 83.607 305 46 1 1 301 1 305 0.0 521
Msa0787260 AT5G55260.2 75.931 349 33 3 1 301 1 346 0.0 515
Msa0787260 AT2G42500.1 58.958 307 112 5 3 301 13 313 4.96e-128 367
Msa0787260 AT3G58500.1 58.632 307 113 5 3 301 13 313 1.22e-127 366
Msa0787260 AT1G69960.1 59.223 309 108 5 3 301 7 307 1.29e-126 363
Msa0787260 AT1G10430.2 58.576 309 110 5 3 301 6 306 2.59e-126 363
Msa0787260 AT1G10430.1 58.576 309 110 5 3 301 6 306 2.59e-126 363
Msa0787260 AT1G59830.1 59.223 309 108 5 3 301 6 306 6.57e-126 362
Msa0787260 AT1G50370.1 52.117 307 134 5 3 301 2 303 6.67e-111 323
Msa0787260 AT3G19980.1 52.117 307 134 5 3 301 2 303 1.65e-110 322
Msa0787260 AT1G59830.2 58.555 263 86 5 3 251 6 259 8.91e-104 304
Msa0787260 AT2G42500.2 48.534 307 97 6 3 301 13 266 3.28e-93 277
Msa0787260 AT1G64040.1 42.088 297 147 4 17 294 27 317 3.37e-80 246
Msa0787260 AT5G59160.3 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0787260 AT5G59160.2 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0787260 AT5G59160.1 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0787260 AT2G39840.1 41.060 302 158 4 1 288 19 314 4.68e-80 246
Msa0787260 AT5G43380.1 42.088 297 150 4 17 297 26 316 8.32e-80 245
Msa0787260 AT5G43380.2 42.088 297 150 4 17 297 26 316 1.32e-79 244
Msa0787260 AT5G43380.3 42.088 297 150 4 17 297 26 316 1.41e-79 244
Msa0787260 AT2G29400.1 40.924 303 156 5 1 287 20 315 1.58e-79 244
Msa0787260 AT4G11240.1 43.416 281 144 3 17 288 27 301 2.92e-79 244
Msa0787260 AT5G27840.1 43.750 288 147 3 17 295 32 313 4.44e-79 243
Msa0787260 AT3G05580.1 43.750 288 147 3 17 295 32 313 7.80e-79 242
Msa0787260 AT5G27840.4 44.251 287 144 4 17 294 32 311 9.46e-79 243
Msa0787260 AT5G27840.2 44.251 287 144 4 17 294 32 311 9.79e-79 242
Msa0787260 AT5G27840.3 44.251 287 144 4 17 294 32 311 9.79e-79 242
Msa0787260 AT3G46820.1 42.349 281 147 3 17 288 36 310 3.29e-77 238
Msa0787260 AT3G05580.2 46.256 227 107 3 17 234 32 252 9.68e-65 204
Msa0787260 AT2G42500.3 67.500 120 36 1 3 119 13 132 1.47e-52 170
Msa0787260 AT2G42500.4 67.500 120 36 1 3 119 13 132 1.83e-52 170
Msa0787260 AT2G42810.1 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0787260 AT2G42810.5 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0787260 AT2G42810.4 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0787260 AT2G42500.5 67.500 120 36 1 3 119 13 132 2.80e-52 169
Msa0787260 AT2G42810.3 37.329 292 164 7 8 285 234 520 7.82e-52 178
Msa0787260 AT2G42810.2 37.329 292 164 7 8 285 235 521 8.20e-52 178
Msa0787260 AT4G03080.1 40.809 272 136 7 17 267 550 817 2.87e-51 181
Msa0787260 AT2G27210.1 38.489 278 140 7 20 273 678 948 9.56e-46 166
Msa0787260 AT2G27210.2 38.489 278 140 7 20 273 673 943 1.01e-45 166
Msa0787260 AT1G03445.1 38.433 268 139 9 21 267 480 742 2.23e-45 164
Msa0787260 AT1G03445.2 38.433 268 139 9 21 267 480 742 2.53e-45 164
Msa0787260 AT1G08420.2 38.129 278 141 7 20 273 684 954 5.21e-45 163
Msa0787260 AT1G08420.1 38.129 278 141 7 20 273 689 959 5.27e-45 163
Msa0787260 AT5G63870.1 29.412 340 162 12 24 291 52 385 7.37e-28 112
Msa0787260 AT5G63870.2 29.412 340 162 12 24 291 52 385 7.37e-28 112
Msa0787260 AT5G63870.3 33.061 245 109 9 24 219 52 290 3.16e-24 100
Msa0787260 AT5G10900.3 27.059 255 136 9 17 233 191 433 2.97e-18 85.5
Msa0787260 AT5G10900.1 27.059 255 136 9 17 233 191 433 3.44e-18 85.1
Msa0787260 AT5G10900.2 27.059 255 136 9 17 233 191 433 3.73e-18 85.1
Msa0787260 AT1G48120.1 28.428 299 143 9 25 256 631 925 4.71e-17 82.0

Find 103 sgRNAs with CRISPR-Local

Find 541 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATTCAATTATACTTCT+TGG 0.213493 5_2:-72917044 None:intergenic
TGGATTTGATCAGGGAATAT+TGG 0.236618 5_2:+72923955 Msa0787260:three_prime_UTR
AGTTTGTGATTTGCAATATA+TGG 0.239251 5_2:+72923836 Msa0787260:three_prime_UTR
TTTGGTGGCAGTGTTGTTAC+TGG 0.261554 5_2:+72922975 Msa0787260:CDS
TGGTAATGTAGCTGCGATTC+TGG 0.299247 5_2:+72923208 Msa0787260:CDS
AGAATTTGATTAGAAAGAAT+TGG 0.299797 5_2:+72923935 Msa0787260:three_prime_UTR
AAACAAATTATTTGTTCCTT+GGG 0.304724 5_2:+72918942 Msa0787260:CDS
AAAACAAATTATTTGTTCCT+TGG 0.317436 5_2:+72918941 Msa0787260:CDS
GGATTTGATCAGGGAATATT+GGG 0.317468 5_2:+72923956 Msa0787260:three_prime_UTR
GTAGTCTGGTGCTGGTTTCT+TGG 0.317981 5_2:-72923643 None:intergenic
GCATATATAGTCAATGTTAT+TGG 0.326109 5_2:-72923009 None:intergenic
GGACAGAGGGTTTATTTAGA+AGG 0.332982 5_2:+72923890 Msa0787260:three_prime_UTR
CAGATCGGATAACGCTCATT+AGG 0.335086 5_2:+72921487 Msa0787260:CDS
AGAAAGAATTGGATTTGATC+AGG 0.335699 5_2:+72923946 Msa0787260:three_prime_UTR
ATGTACCTGTAGCAATAATT+TGG 0.338871 5_2:-72923104 None:intergenic
CGTGGTGCTGGTTTCTTGTT+TGG 0.342815 5_2:+72922957 Msa0787260:CDS
TGGTAATGGAAGGATATAAA+TGG 0.342924 5_2:+72923045 Msa0787260:CDS
TTGTGCATCGTTATTATTGT+AGG 0.349281 5_2:+72923800 Msa0787260:three_prime_UTR
AGATCGGATAACGCTCATTA+GGG 0.371230 5_2:+72921488 Msa0787260:CDS
TGCTATTTCAACATTGGATC+AGG 0.378795 5_2:+72922743 Msa0787260:CDS
GTGTGATCTGACGACTTTCA+TGG 0.387381 5_2:-72921515 None:intergenic
GATATAGAAATAAAGAAATC+TGG 0.405093 5_2:-72923676 None:intergenic
TTGACTTCAGATTCCTTCAA+TGG 0.405396 5_2:-72917208 None:intergenic
AAACAAGAAACCAGCACCAC+GGG 0.415241 5_2:-72922955 None:intergenic
TTCTCCTGCTATTTCAACAT+TGG 0.419861 5_2:+72922737 Msa0787260:CDS
TCTGGTGCTGGTTTCTTGGC+AGG 0.420120 5_2:-72923639 None:intergenic
GAATATCAAAACTTGAATAG+TGG 0.427016 5_2:-72924005 None:intergenic
AGGAGAGGAGCTTCCCTTGT+TGG 0.434085 5_2:+72917006 None:intergenic
GAAGAGATGCGAACCATTGA+AGG 0.435978 5_2:+72917195 Msa0787260:CDS
CTAATGAGCGTTATCCGATC+TGG 0.440261 5_2:-72921486 None:intergenic
CTGGCTTATAAGAAGTAGTC+TGG 0.442560 5_2:-72923657 None:intergenic
CTGAAGATATTGTGGATGGC+TGG 0.450014 5_2:+72922922 Msa0787260:CDS
ACTGTCAAATTCATGATTGA+AGG 0.450377 5_2:+72922154 Msa0787260:CDS
GTTCTCGAGGCAGAAGAGTC+TGG 0.452873 5_2:+72923768 Msa0787260:three_prime_UTR
GGTTTGAGTCCCCGTGGTGC+TGG 0.466408 5_2:+72922945 Msa0787260:CDS
GTTGCTCTATCTGCCTGTCT+AGG 0.467674 5_2:-72917171 None:intergenic
GAAAGAATTGGATTTGATCA+GGG 0.470559 5_2:+72923947 Msa0787260:three_prime_UTR
CAGCCATCCACAATATCTTC+AGG 0.472514 5_2:-72922921 None:intergenic
TTGAAGAAAGCAATGTTCAA+AGG 0.480772 5_2:+72917263 Msa0787260:CDS
TTTATTATGTGTAGATATGT+GGG 0.482339 5_2:+72918858 Msa0787260:intron
TGAAGAAAGCAATGTTCAAA+GGG 0.485829 5_2:+72917264 Msa0787260:CDS
AATATCAAAACTTGAATAGT+GGG 0.486185 5_2:-72924004 None:intergenic
TATAAGAAGTAGTCTGGTGC+TGG 0.489767 5_2:-72923651 None:intergenic
TTCTTCAACAAGAATTTCGA+TGG 0.490055 5_2:-72917248 None:intergenic
ACAAATGAACCTCTGAATAC+AGG 0.494503 5_2:-72924128 None:intergenic
TGATCCAATGTTGAAATAGC+AGG 0.495341 5_2:-72922741 None:intergenic
CCGAGCTCATCAGTTGGTAA+TGG 0.500833 5_2:+72923031 Msa0787260:CDS
ATAATCAGATAGTTACTGTC+TGG 0.506188 5_2:+72923075 Msa0787260:CDS
TGTGTTTGATGCTGCCCCAC+AGG 0.508629 5_2:+72923262 Msa0787260:CDS
GTAAAGTAGCTTACAGTGAC+AGG 0.511043 5_2:-72917295 None:intergenic
CAGCTCCAAATTATTGCTAC+AGG 0.516403 5_2:+72923099 Msa0787260:CDS
GGCGAGGAGATGTCTGTAAC+GGG 0.517864 5_2:+72923720 Msa0787260:three_prime_UTR
GAAGATATTGTGGATGGCTG+GGG 0.521686 5_2:+72922924 Msa0787260:CDS
TGATTTGAAAATAAATAAAG+AGG 0.523175 5_2:+72917062 Msa0787260:five_prime_UTR
GCAAATTGAAGAAGAAGAAG+CGG 0.525145 5_2:+72917101 Msa0787260:five_prime_UTR
CATGCATTTCCTGTATTCAG+AGG 0.529033 5_2:+72924119 Msa0787260:three_prime_UTR
TGATGTCTATCAAAATCACT+TGG 0.529148 5_2:+72924184 Msa0787260:three_prime_UTR
TGAAGATATTGTGGATGGCT+GGG 0.534107 5_2:+72922923 Msa0787260:CDS
CGTTCATTCATAACATGTGA+TGG 0.538243 5_2:+72923869 Msa0787260:three_prime_UTR
GAGAGATGTCAGACCTAGAC+AGG 0.540434 5_2:+72917158 Msa0787260:exon
AACAAATTATTTGTTCCTTG+GGG 0.541769 5_2:+72918943 Msa0787260:CDS
GGTGCTGGTTTCTTGTTTGG+TGG 0.563297 5_2:+72922960 Msa0787260:CDS
TAGATATGTGGGGATATTCA+CGG 0.568875 5_2:+72918869 Msa0787260:intron
GTGCCATGTGTGACCTCCTA+TGG 0.570229 5_2:+72922892 Msa0787260:CDS
CTTCAGGATCTGACCATAGG+AGG 0.571711 5_2:-72922905 None:intergenic
CTGTCAAATTCATGATTGAA+GGG 0.573094 5_2:+72922155 Msa0787260:CDS
TGAATACACGAATTGACAAA+CGG 0.574680 5_2:+72923699 Msa0787260:three_prime_UTR
GTCAGATCCTGAAGATATTG+TGG 0.574883 5_2:+72922914 Msa0787260:CDS
TATAGTCAATGTTATTGGTG+TGG 0.577194 5_2:-72923004 None:intergenic
CATAACATGTGATGGACAGA+GGG 0.584205 5_2:+72923877 Msa0787260:three_prime_UTR
CCATTACCAACTGATGAGCT+CGG 0.585713 5_2:-72923031 None:intergenic
CAAACAAGAAACCAGCACCA+CGG 0.587533 5_2:-72922956 None:intergenic
AACTATTGATAGAAAGCAAG+AGG 0.588375 5_2:+72922857 Msa0787260:CDS
GCTCATCAGTTGGTAATGGA+AGG 0.596917 5_2:+72923035 Msa0787260:CDS
TATCTTCAGGATCTGACCAT+AGG 0.598419 5_2:-72922908 None:intergenic
ATCAGGTGAGATATCCAGAT+CGG 0.605328 5_2:+72921472 Msa0787260:intron
CGGCGAGGAGATGTCTGTAA+CGG 0.606668 5_2:+72923719 Msa0787260:three_prime_UTR
CTCTATCAACAAAATCCCCA+AGG 0.610370 5_2:-72918958 None:intergenic
TTATTATGTGTAGATATGTG+GGG 0.611235 5_2:+72918859 Msa0787260:intron
GGGATAATTGTCAGTTCTCG+AGG 0.612907 5_2:+72923755 Msa0787260:three_prime_UTR
TCATAACATGTGATGGACAG+AGG 0.626761 5_2:+72923876 Msa0787260:three_prime_UTR
CAAAAGCAGAAACGTTTCAA+CGG 0.628635 5_2:-72918990 None:intergenic
CAGAAAGTAATACAAACACA+TGG 0.633617 5_2:+72924154 Msa0787260:three_prime_UTR
TGACCATAGGAGGTCACACA+TGG 0.639067 5_2:-72922895 None:intergenic
TTTGTGTGTCGGACCAACAA+GGG 0.644355 5_2:-72917019 None:intergenic
GGCTGGGGTTTGAGTCCCCG+TGG 0.645059 5_2:+72922939 Msa0787260:CDS
AAGCAAGAGGTACCTCATGA+CGG 0.645427 5_2:+72922870 Msa0787260:CDS
TCACACATGGCACCGTCATG+AGG 0.646416 5_2:-72922882 None:intergenic
TTGGGAGTCCATATAACCTG+TGG 0.650912 5_2:+72923974 Msa0787260:three_prime_UTR
TATATGCCGAGCTCATCAGT+TGG 0.653349 5_2:+72923025 Msa0787260:CDS
GCTGCGATTCTGGAGTTAGA+CGG 0.654007 5_2:+72923218 Msa0787260:CDS
GATCGGATAACGCTCATTAG+GGG 0.658870 5_2:+72921489 Msa0787260:CDS
GATCCTGAAGATATTGTGGA+TGG 0.671179 5_2:+72922918 Msa0787260:CDS
GAGGAGATGTCTGTAACGGG+AGG 0.677767 5_2:+72923723 Msa0787260:three_prime_UTR
CACATGTTATGAATGAACGA+AGG 0.679378 5_2:-72923865 None:intergenic
GTAACGGGAGGAATCAGCGA+GGG 0.687014 5_2:+72923735 Msa0787260:three_prime_UTR
TTATTGAAACAGGAATCAAG+AGG 0.689638 5_2:+72923612 Msa0787260:intron
ACACGAATTGACAAACGGCG+AGG 0.715893 5_2:+72923704 Msa0787260:three_prime_UTR
AACAAGAAACCAGCACCACG+GGG 0.719181 5_2:-72922954 None:intergenic
TGAAAGTCGTCAGATCACAC+AGG 0.735439 5_2:+72921518 Msa0787260:CDS
ACTTTGCCAACAAACCTGTG+GGG 0.785006 5_2:-72923276 None:intergenic
TGTAACGGGAGGAATCAGCG+AGG 0.791474 5_2:+72923734 Msa0787260:three_prime_UTR
ATAACAAAGAAAATCACACG+TGG 0.807495 5_2:-72922124 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTGATTTAATATGTT+AGG + chr5_2:72917499-72917518 Msa0787260:intron 10.0%
!!! TTTTTTTACTATAATATGTT+AGG + chr5_2:72918201-72918220 Msa0787260:intron 10.0%
!!! TGTATCAATTTATATATTTT+AGG + chr5_2:72918247-72918266 Msa0787260:intron 10.0%
!!! GTATCAATTTATATATTTTA+GGG + chr5_2:72918248-72918267 Msa0787260:intron 10.0%
!!! TTTTTTTATTTAAAAGAGAA+AGG + chr5_2:72918506-72918525 Msa0787260:intron 10.0%
!!! TTTTTTATTTAAAAGAGAAA+GGG + chr5_2:72918507-72918526 Msa0787260:intron 10.0%
!!! TTTTTAAATTTTATTGAAAC+AGG + chr5_2:72923602-72923621 Msa0787260:intron 10.0%
!! TGATTTGAAAATAAATAAAG+AGG + chr5_2:72917062-72917081 Msa0787260:five_prime_UTR 15.0%
!! AATCAAAGTAATAATAAACT+TGG - chr5_2:72918036-72918055 None:intergenic 15.0%
!! ATAGTGAAAAAAAATCTAAA+TGG - chr5_2:72918145-72918164 None:intergenic 15.0%
!!! TTTTTTCACTATTATATGTT+AGG + chr5_2:72918153-72918172 Msa0787260:intron 15.0%
!! AAAAATTAACTTATGGAATA+GGG - chr5_2:72919836-72919855 None:intergenic 15.0%
!! GAAATAAAATTCTGATATTA+TGG - chr5_2:72920458-72920477 None:intergenic 15.0%
!!! AACAAGAATTTTTTAAGTAT+TGG + chr5_2:72920511-72920530 Msa0787260:intron 15.0%
!!! ACAAGAATTTTTTAAGTATT+GGG + chr5_2:72920512-72920531 Msa0787260:intron 15.0%
!! AACAAAAAACAATAGTTAAA+CGG + chr5_2:72921339-72921358 Msa0787260:intron 15.0%
!!! TTTCTATTAAATTTCTGAAA+TGG + chr5_2:72922019-72922038 Msa0787260:intron 15.0%
!! AATCATTCAATTATACTTCT+TGG - chr5_2:72917047-72917066 None:intergenic 20.0%
!! AAAAAAAAAAAAAAGAGGTG+TGG - chr5_2:72917324-72917343 None:intergenic 20.0%
!! TTGGAATTTCAATTTATCTA+GGG + chr5_2:72917547-72917566 Msa0787260:intron 20.0%
!! TGAACTTATGAATTAGAAAT+AGG + chr5_2:72917903-72917922 Msa0787260:intron 20.0%
!! TATGCAATAAAATAGATGTT+AGG + chr5_2:72918296-72918315 Msa0787260:intron 20.0%
!! ATGCAATAAAATAGATGTTA+GGG + chr5_2:72918297-72918316 Msa0787260:intron 20.0%
!!! CCTTTTAACTGAATTTTTTT+CGG - chr5_2:72918597-72918616 None:intergenic 20.0%
!! CGAAAAAAATTCAGTTAAAA+GGG + chr5_2:72918595-72918614 Msa0787260:intron 20.0%
!! GAAAAAAATTCAGTTAAAAG+GGG + chr5_2:72918596-72918615 Msa0787260:intron 20.0%
!! AAAAAAATTCAGTTAAAAGG+GGG + chr5_2:72918597-72918616 Msa0787260:intron 20.0%
!!! TTCAAGTTAATAGTATCATA+TGG + chr5_2:72918741-72918760 Msa0787260:intron 20.0%
!! TCAAGTTAATAGTATCATAT+GGG + chr5_2:72918742-72918761 Msa0787260:intron 20.0%
!!! TTTTATTATGTGTAGATATG+TGG + chr5_2:72918857-72918876 Msa0787260:intron 20.0%
!! TTTATTATGTGTAGATATGT+GGG + chr5_2:72918858-72918877 Msa0787260:intron 20.0%
!!! GGAACAAATAATTTGTTTTA+GGG - chr5_2:72918940-72918959 None:intergenic 20.0%
!!! AGGAACAAATAATTTGTTTT+AGG - chr5_2:72918941-72918960 None:intergenic 20.0%
!! AAAACAAATTATTTGTTCCT+TGG + chr5_2:72918941-72918960 Msa0787260:CDS 20.0%
!! AAACAAATTATTTGTTCCTT+GGG + chr5_2:72918942-72918961 Msa0787260:CDS 20.0%
!!! TGATAATCTTTTATTCTTCT+CGG + chr5_2:72919026-72919045 Msa0787260:intron 20.0%
!!! TTTTGTATGTTTTTGGATTT+TGG + chr5_2:72919255-72919274 Msa0787260:intron 20.0%
!! CTCAATTGTTAATTTATCAT+AGG + chr5_2:72919326-72919345 Msa0787260:intron 20.0%
!!! AATTTGTTCTTATGATTTCT+AGG + chr5_2:72919354-72919373 Msa0787260:intron 20.0%
!! AAAATTAACTTATGGAATAG+GGG - chr5_2:72919835-72919854 None:intergenic 20.0%
!! CAAAAATTAACTTATGGAAT+AGG - chr5_2:72919837-72919856 None:intergenic 20.0%
!!! CTATTCCATAAGTTAATTTT+TGG + chr5_2:72919835-72919854 Msa0787260:intron 20.0%
!! ACAAAAAAACATGACATATT+GGG - chr5_2:72919867-72919886 None:intergenic 20.0%
!! AACAAAAAAACATGACATAT+TGG - chr5_2:72919868-72919887 None:intergenic 20.0%
!!! AATATGTCATGTTTTTTTGT+TGG + chr5_2:72919867-72919886 Msa0787260:intron 20.0%
!!! ATATGTCATGTTTTTTTGTT+GGG + chr5_2:72919868-72919887 Msa0787260:intron 20.0%
!!! TTGAGATTGAGTTTTTTTTT+TGG + chr5_2:72920329-72920348 Msa0787260:intron 20.0%
!!! AAATCTGAAACTTGTTTAAT+TGG + chr5_2:72920360-72920379 Msa0787260:intron 20.0%
!!! CAAGAATTTTTTAAGTATTG+GGG + chr5_2:72920513-72920532 Msa0787260:intron 20.0%
!! TCAAAACTTGATCAAATTTA+TGG - chr5_2:72921267-72921286 None:intergenic 20.0%
!! ACAAAAAACAATAGTTAAAC+GGG + chr5_2:72921340-72921359 Msa0787260:intron 20.0%
!! AATAATGAATGAAAGTGAAA+GGG + chr5_2:72921562-72921581 Msa0787260:intron 20.0%
!!! TTCTCAACATTTTTTTACTT+CGG + chr5_2:72921603-72921622 Msa0787260:intron 20.0%
!!! TCTAGATATCTAGATTTTAT+TGG + chr5_2:72921753-72921772 Msa0787260:intron 20.0%
!! ATTCAATATATCATTTGATG+AGG - chr5_2:72922375-72922394 None:intergenic 20.0%
!! AAATAACCAAAAAGGAAAAT+AGG + chr5_2:72922533-72922552 Msa0787260:intron 20.0%
!! AATAACCAAAAAGGAAAATA+GGG + chr5_2:72922534-72922553 Msa0787260:intron 20.0%
!! ATGTTTGAGTAAATAATTAG+TGG + chr5_2:72923517-72923536 Msa0787260:intron 20.0%
!! GATATAGAAATAAAGAAATC+TGG - chr5_2:72923679-72923698 None:intergenic 20.0%
!! AGAATTTGATTAGAAAGAAT+TGG + chr5_2:72923935-72923954 Msa0787260:three_prime_UTR 20.0%
!! AATATCAAAACTTGAATAGT+GGG - chr5_2:72924007-72924026 None:intergenic 20.0%
! AAAGTAAAAGTAGGAATTGA+AGG - chr5_2:72917361-72917380 None:intergenic 25.0%
!!! AATTCCTACTTTTACTTTCT+GGG + chr5_2:72917363-72917382 Msa0787260:intron 25.0%
! TTGCTCAAATTCAATCAAAT+AGG + chr5_2:72917446-72917465 Msa0787260:intron 25.0%
! TGCTCAAATTCAATCAAATA+GGG + chr5_2:72917447-72917466 Msa0787260:intron 25.0%
! CTTGGAATTTCAATTTATCT+AGG + chr5_2:72917546-72917565 Msa0787260:intron 25.0%
! TTTCATAAGTTCTTCTAGAT+AGG + chr5_2:72917709-72917728 Msa0787260:intron 25.0%
! GGGCTATAAATTAAGTTATA+TGG - chr5_2:72917766-72917785 None:intergenic 25.0%
! AACTTAATTTATAGCCCATT+TGG + chr5_2:72917769-72917788 Msa0787260:intron 25.0%
! AAAAATAAGCCAATCCAAAT+GGG - chr5_2:72917786-72917805 None:intergenic 25.0%
! AAAAAATAAGCCAATCCAAA+TGG - chr5_2:72917787-72917806 None:intergenic 25.0%
! CATTATTCATAAGCTTATCA+AGG + chr5_2:72917835-72917854 Msa0787260:intron 25.0%
!! ATTAAGTTGTTTAGCCAAAA+AGG + chr5_2:72917974-72917993 Msa0787260:intron 25.0%
!! TTAAGTTGTTTAGCCAAAAA+GGG + chr5_2:72917975-72917994 Msa0787260:intron 25.0%
!! TTATTACGAAAGAATTTGCT+CGG + chr5_2:72918102-72918121 Msa0787260:intron 25.0%
!!! ATATAAGAACTACTTTTGCT+TGG + chr5_2:72918224-72918243 Msa0787260:intron 25.0%
! TCTGAAAATAAGCAATTTCA+TGG + chr5_2:72918355-72918374 Msa0787260:intron 25.0%
! ATTTAAAAGAGAAAGGGATA+AGG + chr5_2:72918513-72918532 Msa0787260:intron 25.0%
! TTTAAAAGAGAAAGGGATAA+GGG + chr5_2:72918514-72918533 Msa0787260:intron 25.0%
! TAAGAATTGAACCTTAACAT+GGG + chr5_2:72918539-72918558 Msa0787260:intron 25.0%
! CCGAAAAAAATTCAGTTAAA+AGG + chr5_2:72918594-72918613 Msa0787260:intron 25.0%
! CAAGTTAATAGTATCATATG+GGG + chr5_2:72918743-72918762 Msa0787260:intron 25.0%
!!! CTTGTGATTTTTTATGTTAC+TGG + chr5_2:72918819-72918838 Msa0787260:intron 25.0%
! TTATTATGTGTAGATATGTG+GGG + chr5_2:72918859-72918878 Msa0787260:intron 25.0%
! AACAAATTATTTGTTCCTTG+GGG + chr5_2:72918943-72918962 Msa0787260:CDS 25.0%
!! GATAATCTTTTATTCTTCTC+GGG + chr5_2:72919027-72919046 Msa0787260:intron 25.0%
!!! ATATTCTAGTTTCTTTTGTG+TGG + chr5_2:72919110-72919129 Msa0787260:intron 25.0%
!! TTTTTGGATTTTGGATCTTT+TGG + chr5_2:72919264-72919283 Msa0787260:intron 25.0%
!!! TGAACACAATTTGCTATTAT+TGG + chr5_2:72919437-72919456 Msa0787260:intron 25.0%
!! GCATTCAAATTTTGTTCTTT+TGG + chr5_2:72919590-72919609 Msa0787260:intron 25.0%
! AAATTAACTTATGGAATAGG+GGG - chr5_2:72919834-72919853 None:intergenic 25.0%
!! TGTTTTTCCTTGATGTTTTT+CGG + chr5_2:72920580-72920599 Msa0787260:intron 25.0%
!!! ATTGACAGCTCTAATTTTTT+AGG + chr5_2:72920649-72920668 Msa0787260:intron 25.0%
!!! TTGACAGCTCTAATTTTTTA+GGG + chr5_2:72920650-72920669 Msa0787260:intron 25.0%
! CTAATTATTGACATACAATC+AGG + chr5_2:72921455-72921474 Msa0787260:intron 25.0%
! GAATAATGAATGAAAGTGAA+AGG + chr5_2:72921561-72921580 Msa0787260:intron 25.0%
! AATATGGTTCAGTAAATGTT+TGG + chr5_2:72921687-72921706 Msa0787260:intron 25.0%
! CTGACATATTTGATTACTTA+AGG + chr5_2:72921720-72921739 Msa0787260:intron 25.0%
!! AATTGATTTAATCTTGCACA+TGG + chr5_2:72921960-72921979 Msa0787260:intron 25.0%
!! ATTGATTTAATCTTGCACAT+GGG + chr5_2:72921961-72921980 Msa0787260:intron 25.0%
!!! CATTATCCTTTCTATTTTAG+AGG + chr5_2:72922214-72922233 Msa0787260:intron 25.0%
!!! TTGTGTATTTTAAGAGGAAA+AGG + chr5_2:72922303-72922322 Msa0787260:intron 25.0%
!!! TGTGTATTTTAAGAGGAAAA+GGG + chr5_2:72922304-72922323 Msa0787260:intron 25.0%
! GAGTATAGAAATAACCAAAA+AGG + chr5_2:72922525-72922544 Msa0787260:intron 25.0%
!! TAAAACCCTATTTTCCTTTT+TGG - chr5_2:72922542-72922561 None:intergenic 25.0%
!!! AAAGGAAAATAGGGTTTTAA+TGG + chr5_2:72922543-72922562 Msa0787260:intron 25.0%
! AACTTCAGACACATAAATTA+GGG - chr5_2:72922781-72922800 None:intergenic 25.0%
! AAACTTCAGACACATAAATT+AGG - chr5_2:72922782-72922801 None:intergenic 25.0%
!!! TGAAGTTTTAGATCGTATAT+AGG + chr5_2:72922794-72922813 Msa0787260:intron 25.0%
! GCATATATAGTCAATGTTAT+TGG - chr5_2:72923012-72923031 None:intergenic 25.0%
! CTGTACATATATAAGCTATA+TGG + chr5_2:72923330-72923349 Msa0787260:intron 25.0%
!! AATCAATGGATTTGACATTA+AGG - chr5_2:72923396-72923415 None:intergenic 25.0%
! TTTATGTTCTTTGCTACATT+AGG + chr5_2:72923540-72923559 Msa0787260:intron 25.0%
! TTATGTTCTTTGCTACATTA+GGG + chr5_2:72923541-72923560 Msa0787260:intron 25.0%
!! AGTTTGTGATTTGCAATATA+TGG + chr5_2:72923836-72923855 Msa0787260:three_prime_UTR 25.0%
! GAATATCAAAACTTGAATAG+TGG - chr5_2:72924008-72924027 None:intergenic 25.0%
TTCTTCAACAAGAATTTCGA+TGG - chr5_2:72917251-72917270 None:intergenic 30.0%
TTGAAGAAAGCAATGTTCAA+AGG + chr5_2:72917263-72917282 Msa0787260:CDS 30.0%
TGAAGAAAGCAATGTTCAAA+GGG + chr5_2:72917264-72917283 Msa0787260:CDS 30.0%
!! CAATTCCTACTTTTACTTTC+TGG + chr5_2:72917362-72917381 Msa0787260:intron 30.0%
GAATTTGAGCAATAAAACCA+CGG - chr5_2:72917438-72917457 None:intergenic 30.0%
AATTCAATCAAATAGGGTAG+TGG + chr5_2:72917453-72917472 Msa0787260:intron 30.0%
! GAATAAGAACTAGTTTCACT+TGG + chr5_2:72917528-72917547 Msa0787260:intron 30.0%
CTGACAAGAACTTATGAAAA+CGG + chr5_2:72917652-72917671 Msa0787260:intron 30.0%
AATTTATAGCCCATTTGGAT+TGG + chr5_2:72917774-72917793 Msa0787260:intron 30.0%
! AAAAACACAAAAGCCCTTTT+TGG - chr5_2:72917991-72918010 None:intergenic 30.0%
! TATTGATTGGATTCACGTAT+TGG + chr5_2:72918071-72918090 Msa0787260:intron 30.0%
ATTGATTGGATTCACGTATT+GGG + chr5_2:72918072-72918091 Msa0787260:intron 30.0%
AATAAGCAATTTCATGGTGA+TGG + chr5_2:72918361-72918380 Msa0787260:intron 30.0%
ATAAGCAATTTCATGGTGAT+GGG + chr5_2:72918362-72918381 Msa0787260:intron 30.0%
TAAACCTGAAAGCAAAAACA+GGG - chr5_2:72918471-72918490 None:intergenic 30.0%
TTAAAAGAGAAAGGGATAAG+GGG + chr5_2:72918515-72918534 Msa0787260:intron 30.0%
CTAAGAATTGAACCTTAACA+TGG + chr5_2:72918538-72918557 Msa0787260:intron 30.0%
AGCGATAAAACACATAAAGT+GGG + chr5_2:72918564-72918583 Msa0787260:intron 30.0%
CTTACAGGGATCAAATAAAT+GGG + chr5_2:72918635-72918654 Msa0787260:intron 30.0%
TTACAGGGATCAAATAAATG+GGG + chr5_2:72918636-72918655 Msa0787260:intron 30.0%
!!! ATGAAGGAGCTTTTTAAAGT+TGG + chr5_2:72918905-72918924 Msa0787260:CDS 30.0%
AGTATAGAAATACGCTCTTA+TGG + chr5_2:72919179-72919198 Msa0787260:intron 30.0%
!!! CGTTTGGTTTTGTATGTTTT+TGG + chr5_2:72919248-72919267 Msa0787260:intron 30.0%
GGATTCTTGTAATTGTTGTA+AGG - chr5_2:72919293-72919312 None:intergenic 30.0%
! TTCTTATGATTTCTAGGTTG+TGG + chr5_2:72919360-72919379 Msa0787260:intron 30.0%
! TCTTATGATTTCTAGGTTGT+GGG + chr5_2:72919361-72919380 Msa0787260:intron 30.0%
!!! GTGAACTCAATGCTTTTTTT+TGG + chr5_2:72919414-72919433 Msa0787260:intron 30.0%
AAATTCCACATGTCTTTATG+TGG + chr5_2:72919464-72919483 Msa0787260:intron 30.0%
AATTCCACATGTCTTTATGT+GGG + chr5_2:72919465-72919484 Msa0787260:intron 30.0%
CTATTAGTAATCCAGTATTG+TGG + chr5_2:72919540-72919559 Msa0787260:intron 30.0%
!!! ATCCAGTATTGTGGTTTTAT+TGG + chr5_2:72919549-72919568 Msa0787260:intron 30.0%
! TCAAATTTTGTTCTTTTGGC+TGG + chr5_2:72919594-72919613 Msa0787260:intron 30.0%
ATGGAATGTTATGCATATGT+TGG + chr5_2:72919633-72919652 Msa0787260:intron 30.0%
AAATAACTACCGAGTGAAAA+AGG - chr5_2:72919659-72919678 None:intergenic 30.0%
TTTAGTAGGGCTTAATTGTT+GGG - chr5_2:72919795-72919814 None:intergenic 30.0%
!!! TCGTTGGTTTTTATATGACA+CGG + chr5_2:72920222-72920241 Msa0787260:intron 30.0%
!!! CGTCAAAAATTTTGAGATTC+CGG + chr5_2:72920245-72920264 Msa0787260:intron 30.0%
!!! TTTTTTAAGTATTGGGGCTT+TGG + chr5_2:72920519-72920538 Msa0787260:intron 30.0%
!!! TTTTTAAGTATTGGGGCTTT+GGG + chr5_2:72920520-72920539 Msa0787260:intron 30.0%
ATTAGAGCTGTCAATTTGAT+GGG - chr5_2:72920644-72920663 None:intergenic 30.0%
AATTAGAGCTGTCAATTTGA+TGG - chr5_2:72920645-72920664 None:intergenic 30.0%
GGGAGATTAAGAAAAACTAT+AGG + chr5_2:72920919-72920938 Msa0787260:intron 30.0%
GGGAGATTAAGAAAAACTAT+AGG + chr5_2:72920919-72920938 Msa0787260:intron 30.0%
TGCTTTATCTGTAATGCAAA+TGG + chr5_2:72921129-72921148 Msa0787260:intron 30.0%
!!! TATTTTTTAGGAAGAATGCC+TGG + chr5_2:72921196-72921215 Msa0787260:intron 30.0%
!! TACATGTGTTTTTGTGTAGA+GGG + chr5_2:72921776-72921795 Msa0787260:intron 30.0%
TGATTGTTTCCTTGTAATCA+TGG + chr5_2:72921819-72921838 Msa0787260:intron 30.0%
GATTGTTTCCTTGTAATCAT+GGG + chr5_2:72921820-72921839 Msa0787260:intron 30.0%
ATTGTTTCCTTGTAATCATG+GGG + chr5_2:72921821-72921840 Msa0787260:intron 30.0%
ATAACAAAGAAAATCACACG+TGG - chr5_2:72922127-72922146 None:intergenic 30.0%
ACTGTCAAATTCATGATTGA+AGG + chr5_2:72922154-72922173 Msa0787260:CDS 30.0%
CTGTCAAATTCATGATTGAA+GGG + chr5_2:72922155-72922174 Msa0787260:CDS 30.0%
!!! TTTTCAAGTAACAGTGTCAA+TGG - chr5_2:72922187-72922206 None:intergenic 30.0%
!! TCCTTTCTATTTTAGAGGAA+CGG + chr5_2:72922219-72922238 Msa0787260:intron 30.0%
CTCTTAAAATACACAAAGAC+AGG - chr5_2:72922299-72922318 None:intergenic 30.0%
!! CTGTCTTTGTGTATTTTAAG+AGG + chr5_2:72922297-72922316 Msa0787260:intron 30.0%
TTTCTATACTCAAGAAATGC+TGG - chr5_2:72922516-72922535 None:intergenic 30.0%
! AACAAGATTTTCAGTGTTCA+TGG + chr5_2:72922708-72922727 Msa0787260:CDS 30.0%
TTCTATCAATAGTTCGTATC+TGG - chr5_2:72922851-72922870 None:intergenic 30.0%
AACTATTGATAGAAAGCAAG+AGG + chr5_2:72922857-72922876 Msa0787260:CDS 30.0%
TATAGTCAATGTTATTGGTG+TGG - chr5_2:72923007-72923026 None:intergenic 30.0%
!! TGGTAATGGAAGGATATAAA+TGG + chr5_2:72923045-72923064 Msa0787260:CDS 30.0%
ATAATCAGATAGTTACTGTC+TGG + chr5_2:72923075-72923094 Msa0787260:CDS 30.0%
ATGTACCTGTAGCAATAATT+TGG - chr5_2:72923107-72923126 None:intergenic 30.0%
CTATTACTCTATTAGTGTTC+TGG + chr5_2:72923148-72923167 Msa0787260:intron 30.0%
TAATTAATTTCCTCCTTGGT+GGG - chr5_2:72923571-72923590 None:intergenic 30.0%
TTATTGAAACAGGAATCAAG+AGG + chr5_2:72923612-72923631 Msa0787260:intron 30.0%
TGAATACACGAATTGACAAA+CGG + chr5_2:72923699-72923718 Msa0787260:three_prime_UTR 30.0%
TTGTGCATCGTTATTATTGT+AGG + chr5_2:72923800-72923819 Msa0787260:three_prime_UTR 30.0%
AGAAAGAATTGGATTTGATC+AGG + chr5_2:72923946-72923965 Msa0787260:three_prime_UTR 30.0%
GAAAGAATTGGATTTGATCA+GGG + chr5_2:72923947-72923966 Msa0787260:three_prime_UTR 30.0%
CAGAAAGTAATACAAACACA+TGG + chr5_2:72924154-72924173 Msa0787260:three_prime_UTR 30.0%
TGATGTCTATCAAAATCACT+TGG + chr5_2:72924184-72924203 Msa0787260:three_prime_UTR 30.0%
!! ACTTCTTGGTTTTTGTGTGT+CGG - chr5_2:72917033-72917052 None:intergenic 35.0%
GCAAATTGAAGAAGAAGAAG+CGG + chr5_2:72917101-72917120 Msa0787260:five_prime_UTR 35.0%
TTGACTTCAGATTCCTTCAA+TGG - chr5_2:72917211-72917230 None:intergenic 35.0%
!!! CAATAAGTTTTGGGTCTGTT+TGG + chr5_2:72917577-72917596 Msa0787260:intron 35.0%
ACGTATTTGAGCTTATATGC+TGG + chr5_2:72917609-72917628 Msa0787260:intron 35.0%
!! GCATTTCATAAGCTGTTTTC+AGG + chr5_2:72917682-72917701 Msa0787260:intron 35.0%
! TGTTAGGGTCACTTTATCAA+AGG + chr5_2:72918312-72918331 Msa0787260:intron 35.0%
! GTTAGGGTCACTTTATCAAA+GGG + chr5_2:72918313-72918332 Msa0787260:intron 35.0%
! TTAGGGTCACTTTATCAAAG+GGG + chr5_2:72918314-72918333 Msa0787260:intron 35.0%
CTAAACCTGAAAGCAAAAAC+AGG - chr5_2:72918472-72918491 None:intergenic 35.0%
! CACTTTATGTGTTTTATCGC+TGG - chr5_2:72918565-72918584 None:intergenic 35.0%
CAGCGATAAAACACATAAAG+TGG + chr5_2:72918563-72918582 Msa0787260:intron 35.0%
GCGATAAAACACATAAAGTG+GGG + chr5_2:72918565-72918584 Msa0787260:intron 35.0%
TAAAACACATAAAGTGGGGA+TGG + chr5_2:72918569-72918588 Msa0787260:intron 35.0%
AAAACACATAAAGTGGGGAT+GGG + chr5_2:72918570-72918589 Msa0787260:intron 35.0%
GCTTACAGGGATCAAATAAA+TGG + chr5_2:72918634-72918653 Msa0787260:intron 35.0%
ATAAATGGGGCTTTGCAATT+TGG + chr5_2:72918649-72918668 Msa0787260:intron 35.0%
TAAATGGGGCTTTGCAATTT+GGG + chr5_2:72918650-72918669 Msa0787260:intron 35.0%
TAGATATGTGGGGATATTCA+CGG + chr5_2:72918869-72918888 Msa0787260:intron 35.0%
!!! AAGGAGCTTTTTAAAGTTGG+TGG + chr5_2:72918908-72918927 Msa0787260:CDS 35.0%
CAAAAGCAGAAACGTTTCAA+CGG - chr5_2:72918993-72919012 None:intergenic 35.0%
!! TTGTGTGGTCTTGTATGATT+TGG + chr5_2:72919125-72919144 Msa0787260:intron 35.0%
!! TGTGTGGTCTTGTATGATTT+GGG + chr5_2:72919126-72919145 Msa0787260:intron 35.0%
! TTGTAGTTTTTGTGTGCGTT+TGG + chr5_2:72919232-72919251 Msa0787260:intron 35.0%
CAATTGAGCAAACTTACTGA+AGG - chr5_2:72919314-72919333 None:intergenic 35.0%
GAAACTTGAAAATCTGTTGG+AGG + chr5_2:72919502-72919521 Msa0787260:intron 35.0%
CACCAATAAAACCACAATAC+TGG - chr5_2:72919554-72919573 None:intergenic 35.0%
!!! ATATGTTGGCCTTTTTCACT+CGG + chr5_2:72919647-72919666 Msa0787260:intron 35.0%
AGTAAAATGCTGTCTTCTGT+GGG - chr5_2:72919685-72919704 None:intergenic 35.0%
AAGTAAAATGCTGTCTTCTG+TGG - chr5_2:72919686-72919705 None:intergenic 35.0%
AGAACAGAAACCTACAAAGT+GGG - chr5_2:72919720-72919739 None:intergenic 35.0%
! TTGTTGGGGCTTTTGTATTT+GGG - chr5_2:72919780-72919799 None:intergenic 35.0%
! ATTGTTGGGGCTTTTGTATT+TGG - chr5_2:72919781-72919800 None:intergenic 35.0%
TTAGTAGGGCTTAATTGTTG+GGG - chr5_2:72919794-72919813 None:intergenic 35.0%
CTTTAGTAGGGCTTAATTGT+TGG - chr5_2:72919796-72919815 None:intergenic 35.0%
TGGGGCCAAAAATTAACTTA+TGG - chr5_2:72919843-72919862 None:intergenic 35.0%
AAAACATGACATATTGGGCT+GGG - chr5_2:72919862-72919881 None:intergenic 35.0%
AAAAACATGACATATTGGGC+TGG - chr5_2:72919863-72919882 None:intergenic 35.0%
AGGTTTCTTCCTTCAAACAA+GGG - chr5_2:72919916-72919935 None:intergenic 35.0%
AAGGTTTCTTCCTTCAAACA+AGG - chr5_2:72919917-72919936 None:intergenic 35.0%
CTTCATACCAATGAGGTTTA+CGG - chr5_2:72920031-72920050 None:intergenic 35.0%
CGTGATTGTATTGTCTTGTA+AGG - chr5_2:72920098-72920117 None:intergenic 35.0%
ACGTTTCTAAATAGATCCTC+CGG + chr5_2:72920115-72920134 Msa0787260:intron 35.0%
!!! CAAAAATTTTGAGATTCCGG+CGG + chr5_2:72920248-72920267 Msa0787260:intron 35.0%
!!! TTTTAAGTATTGGGGCTTTG+GGG + chr5_2:72920521-72920540 Msa0787260:intron 35.0%
ATAGGCCCTAAATATAAGGT+TGG - chr5_2:72920547-72920566 None:intergenic 35.0%
TCACATAGGCCCTAAATATA+AGG - chr5_2:72920551-72920570 None:intergenic 35.0%
! TATTTAGGGCCTATGTGAAA+AGG + chr5_2:72920553-72920572 Msa0787260:intron 35.0%
! ATTTAGGGCCTATGTGAAAA+GGG + chr5_2:72920554-72920573 Msa0787260:intron 35.0%
! AAACAAGACCCTTTTCACAT+AGG - chr5_2:72920565-72920584 None:intergenic 35.0%
TTAGAGCTGTCAATTTGATG+GGG - chr5_2:72920643-72920662 None:intergenic 35.0%
GAGTCCTTTGTCTTTAATGA+GGG + chr5_2:72920672-72920691 Msa0787260:intron 35.0%
AGTCCTTTGTCTTTAATGAG+GGG + chr5_2:72920673-72920692 Msa0787260:intron 35.0%
TGACAACACTGTCAAACTAT+TGG - chr5_2:72920718-72920737 None:intergenic 35.0%
TTGACAGTGTTGTCAAATAG+AGG + chr5_2:72920723-72920742 Msa0787260:intron 35.0%
CTGTACTAAATTGCGTATCA+GGG - chr5_2:72920796-72920815 None:intergenic 35.0%
CTGATACGCAATTTAGTACA+GGG + chr5_2:72920795-72920814 Msa0787260:intron 35.0%
! GAGAAAGTTGTGTTGTTGAT+TGG + chr5_2:72921065-72921084 Msa0787260:intron 35.0%
!!! CAAATGGACTGTTCACTTTT+GGG + chr5_2:72921145-72921164 Msa0787260:intron 35.0%
AGCACAGATAATGACTCAAA+AGG - chr5_2:72921410-72921429 None:intergenic 35.0%
TTCAATATCCATCACTTGAC+AGG + chr5_2:72921634-72921653 Msa0787260:intron 35.0%
TTACTGAACCATATTTCCGA+AGG - chr5_2:72921682-72921701 None:intergenic 35.0%
!! GTACATGTGTTTTTGTGTAG+AGG + chr5_2:72921775-72921794 Msa0787260:intron 35.0%
CTAATATCTCAATCTGCACA+AGG - chr5_2:72921929-72921948 None:intergenic 35.0%
GGTATGAAAAATGCAGTTTG+TGG - chr5_2:72922053-72922072 None:intergenic 35.0%
!!! TCTTTTTTCCGTCTGTTTTG+TGG + chr5_2:72922092-72922111 Msa0787260:intron 35.0%
!!! CTTTTTTCCGTCTGTTTTGT+GGG + chr5_2:72922093-72922112 Msa0787260:intron 35.0%
!! CCTTTCTATTTTAGAGGAAC+GGG + chr5_2:72922220-72922239 Msa0787260:intron 35.0%
!! CTTTCTATTTTAGAGGAACG+GGG + chr5_2:72922221-72922240 Msa0787260:intron 35.0%
!! TTTTAAGAGGAAAAGGGTTG+AGG + chr5_2:72922310-72922329 Msa0787260:intron 35.0%
CTGTCAAAATATTTGGCCAA+TGG - chr5_2:72922352-72922371 None:intergenic 35.0%
GATGAGGCTGTCAAAATATT+TGG - chr5_2:72922359-72922378 None:intergenic 35.0%
! AAGATTTTCAGTGTTCATGG+TGG + chr5_2:72922711-72922730 Msa0787260:CDS 35.0%
!! TTCTCCTGCTATTTCAACAT+TGG + chr5_2:72922737-72922756 Msa0787260:CDS 35.0%
TGATCCAATGTTGAAATAGC+AGG - chr5_2:72922744-72922763 None:intergenic 35.0%
!! TGCTATTTCAACATTGGATC+AGG + chr5_2:72922743-72922762 Msa0787260:CDS 35.0%
TTTCGTCTTTGTTACAGATG+TGG + chr5_2:72923188-72923207 Msa0787260:intron 35.0%
! GCTTGTATTGCTTCTTTTTG+AGG - chr5_2:72923366-72923385 None:intergenic 35.0%
TTCTTTACCACACGAATCAA+TGG - chr5_2:72923410-72923429 None:intergenic 35.0%
AATTAATTTCCTCCTTGGTG+GGG - chr5_2:72923570-72923589 None:intergenic 35.0%
CTAATTAATTTCCTCCTTGG+TGG - chr5_2:72923572-72923591 None:intergenic 35.0%
CAGCTAATTAATTTCCTCCT+TGG - chr5_2:72923575-72923594 None:intergenic 35.0%
CACATGTTATGAATGAACGA+AGG - chr5_2:72923868-72923887 None:intergenic 35.0%
CGTTCATTCATAACATGTGA+TGG + chr5_2:72923869-72923888 Msa0787260:three_prime_UTR 35.0%
TGGATTTGATCAGGGAATAT+TGG + chr5_2:72923955-72923974 Msa0787260:three_prime_UTR 35.0%
GGATTTGATCAGGGAATATT+GGG + chr5_2:72923956-72923975 Msa0787260:three_prime_UTR 35.0%
! GTTTTTCTCCACAGGTTATA+TGG - chr5_2:72923985-72924004 None:intergenic 35.0%
ACAAATGAACCTCTGAATAC+AGG - chr5_2:72924131-72924150 None:intergenic 35.0%
GTAAAGTAGCTTACAGTGAC+AGG - chr5_2:72917298-72917317 None:intergenic 40.0%
!! CCTACTTTTACTTTCTGGGT+CGG + chr5_2:72917367-72917386 Msa0787260:intron 40.0%
TCATGCTCGATTCACTTACT+GGG + chr5_2:72917390-72917409 Msa0787260:intron 40.0%
! GGCACACTGCAATAAGTTTT+GGG + chr5_2:72917568-72917587 Msa0787260:intron 40.0%
!!! AGTTTTGGGTCTGTTTGGAA+TGG + chr5_2:72917582-72917601 Msa0787260:intron 40.0%
! CGAAAGAATTTGCTCGGTAT+TGG + chr5_2:72918108-72918127 Msa0787260:intron 40.0%
CTTTATCAAAGGGGTCTGTT+AGG + chr5_2:72918323-72918342 Msa0787260:intron 40.0%
!!! GTTTCCCTGTTTTTGCTTTC+AGG + chr5_2:72918464-72918483 Msa0787260:intron 40.0%
TAAAAGGGGGCCAAGAATTA+TGG + chr5_2:72918610-72918629 Msa0787260:intron 40.0%
AAAAGGGGGCCAAGAATTAT+GGG + chr5_2:72918611-72918630 Msa0787260:intron 40.0%
CAAGAATTATGGGGCTTACA+GGG + chr5_2:72918621-72918640 Msa0787260:intron 40.0%
AAATGGGGCTTTGCAATTTG+GGG + chr5_2:72918651-72918670 Msa0787260:intron 40.0%
AAGTCAGTGTAGTTGGGAAT+GGG + chr5_2:72918783-72918802 Msa0787260:intron 40.0%
!! CGGACAGTTTTATGACATGA+AGG + chr5_2:72918889-72918908 Msa0787260:CDS 40.0%
CTCTATCAACAAAATCCCCA+AGG - chr5_2:72918961-72918980 None:intergenic 40.0%
!! CTTGGGGATTTTGTTGATAG+AGG + chr5_2:72918959-72918978 Msa0787260:CDS 40.0%
! CTTCTCGGGAAAGATTTTTG+TGG + chr5_2:72919041-72919060 Msa0787260:intron 40.0%
AATACGCTCTTATGGTTTCC+AGG + chr5_2:72919187-72919206 Msa0787260:intron 40.0%
! TGATTTCTAGGTTGTGGGAT+TGG + chr5_2:72919366-72919385 Msa0787260:intron 40.0%
GGCGAAACTTGAAAATCTGT+TGG + chr5_2:72919499-72919518 Msa0787260:intron 40.0%
ACTTGAAAATCTGTTGGAGG+AGG + chr5_2:72919505-72919524 Msa0787260:intron 40.0%
!! TTGTTCTTTTGGCTGGTTGT+TGG + chr5_2:72919601-72919620 Msa0787260:intron 40.0%
CAGAACAGAAACCTACAAAG+TGG - chr5_2:72919721-72919740 None:intergenic 40.0%
! TGTTGGGGCTTTTGTATTTG+GGG - chr5_2:72919779-72919798 None:intergenic 40.0%
! GAAAGTTTGGGGCTTTAGTA+GGG - chr5_2:72919808-72919827 None:intergenic 40.0%
! AGAAAGTTTGGGGCTTTAGT+AGG - chr5_2:72919809-72919828 None:intergenic 40.0%
TACTAAAGCCCCAAACTTTC+TGG + chr5_2:72919808-72919827 Msa0787260:intron 40.0%
AAACATGACATATTGGGCTG+GGG - chr5_2:72919861-72919880 None:intergenic 40.0%
!!! TTTTTTGTTGGGCCTAGTTG+AGG + chr5_2:72919879-72919898 Msa0787260:intron 40.0%
! TTTTTGTTGGGCCTAGTTGA+GGG + chr5_2:72919880-72919899 Msa0787260:intron 40.0%
AGTGAGAAGGAGTAACAAGA+AGG - chr5_2:72919936-72919955 None:intergenic 40.0%
CGTAAACCTCATTGGTATGA+AGG + chr5_2:72920029-72920048 Msa0787260:intron 40.0%
TCTTGTAAGGCCTTTACTGA+AGG - chr5_2:72920085-72920104 None:intergenic 40.0%
AGCTTCTGCTTCTGAATCTA+CGG - chr5_2:72920170-72920189 None:intergenic 40.0%
TTGGGGCCAACCTTATATTT+AGG + chr5_2:72920538-72920557 Msa0787260:intron 40.0%
TGGGGCCAACCTTATATTTA+GGG + chr5_2:72920539-72920558 Msa0787260:intron 40.0%
GGAGTCCTTTGTCTTTAATG+AGG + chr5_2:72920671-72920690 Msa0787260:intron 40.0%
TCACCCCTCATTAAAGACAA+AGG - chr5_2:72920679-72920698 None:intergenic 40.0%
CCTGTACTAAATTGCGTATC+AGG - chr5_2:72920797-72920816 None:intergenic 40.0%
CCTGATACGCAATTTAGTAC+AGG + chr5_2:72920794-72920813 Msa0787260:intron 40.0%
ATTGCAGATGGTCGAAATAG+AGG - chr5_2:72920874-72920893 None:intergenic 40.0%
TCAGTGTTCTCAATTGCAGA+TGG - chr5_2:72920886-72920905 None:intergenic 40.0%
GCAATTGAGAACACTGAAGT+TGG + chr5_2:72920889-72920908 Msa0787260:intron 40.0%
ATTGAGAACACTGAAGTTGG+AGG + chr5_2:72920892-72920911 Msa0787260:intron 40.0%
ATTTCTCTCCAAGTAGTCTG+TGG - chr5_2:72921021-72921040 None:intergenic 40.0%
! CAATCAAGCATTTTCTCACG+TGG - chr5_2:72921099-72921118 None:intergenic 40.0%
!!! GCAAATGGACTGTTCACTTT+TGG + chr5_2:72921144-72921163 Msa0787260:intron 40.0%
AAGCAGAAAGAAGAAGTTCC+AGG - chr5_2:72921217-72921236 None:intergenic 40.0%
CAACAACTCTTAGAACCTAG+TGG - chr5_2:72921374-72921393 None:intergenic 40.0%
!! CACTAGGTTCTAAGAGTTGT+TGG + chr5_2:72921372-72921391 Msa0787260:intron 40.0%
ATCAGGTGAGATATCCAGAT+CGG + chr5_2:72921472-72921491 Msa0787260:intron 40.0%
AGATCGGATAACGCTCATTA+GGG + chr5_2:72921488-72921507 Msa0787260:CDS 40.0%
CACACAGGTTTGTCTATTAG+CGG + chr5_2:72921533-72921552 Msa0787260:intron 40.0%
AGTGAAAGGGAAAAAGTCAC+TGG + chr5_2:72921575-72921594 Msa0787260:intron 40.0%
TCCATCACTTGACAGGTATA+CGG + chr5_2:72921641-72921660 Msa0787260:intron 40.0%
TTTGTGTAGAGGGTGAATCT+TGG + chr5_2:72921786-72921805 Msa0787260:intron 40.0%
GATTTGACCCCATGATTACA+AGG - chr5_2:72921831-72921850 None:intergenic 40.0%
! CGAAAGGAAAGACTGTTTCT+AGG - chr5_2:72921853-72921872 None:intergenic 40.0%
AGAAACAGTCTTTCCTTTCG+CGG + chr5_2:72921853-72921872 Msa0787260:intron 40.0%
!! CCCGTTCCTCTAAAATAGAA+AGG - chr5_2:72922223-72922242 None:intergenic 40.0%
!! ATTTTAGAGGAACGGGGTTT+AGG + chr5_2:72922227-72922246 Msa0787260:intron 40.0%
TGGGTGATTTCAAGAACCAT+TGG + chr5_2:72922333-72922352 Msa0787260:intron 40.0%
!! ACCGCACTCTTTTAGAGATT+GGG + chr5_2:72922407-72922426 Msa0787260:intron 40.0%
ATGCAGCCTCATTCGATAAA+CGG - chr5_2:72922436-72922455 None:intergenic 40.0%
TTTATCGAATGAGGCTGCAT+GGG + chr5_2:72922436-72922455 Msa0787260:intron 40.0%
TATCTTCAGGATCTGACCAT+AGG - chr5_2:72922911-72922930 None:intergenic 40.0%
GTCAGATCCTGAAGATATTG+TGG + chr5_2:72922914-72922933 Msa0787260:CDS 40.0%
GATCCTGAAGATATTGTGGA+TGG + chr5_2:72922918-72922937 Msa0787260:CDS 40.0%
TGAAGATATTGTGGATGGCT+GGG + chr5_2:72922923-72922942 Msa0787260:CDS 40.0%
CAGCTCCAAATTATTGCTAC+AGG + chr5_2:72923099-72923118 Msa0787260:CDS 40.0%
!! GTCAAATCCATTGATTCGTG+TGG + chr5_2:72923400-72923419 Msa0787260:intron 40.0%
TCCTACTGAATCTACGTATC+AGG + chr5_2:72923465-72923484 Msa0787260:intron 40.0%
CCTACTGAATCTACGTATCA+GGG + chr5_2:72923466-72923485 Msa0787260:intron 40.0%
TATAAGAAGTAGTCTGGTGC+TGG - chr5_2:72923654-72923673 None:intergenic 40.0%
CTGGCTTATAAGAAGTAGTC+TGG - chr5_2:72923660-72923679 None:intergenic 40.0%
!! TCATAACATGTGATGGACAG+AGG + chr5_2:72923876-72923895 Msa0787260:three_prime_UTR 40.0%
!! CATAACATGTGATGGACAGA+GGG + chr5_2:72923877-72923896 Msa0787260:three_prime_UTR 40.0%
GGACAGAGGGTTTATTTAGA+AGG + chr5_2:72923890-72923909 Msa0787260:three_prime_UTR 40.0%
!!! AATAGTGGGTTTTTCTCCAC+AGG - chr5_2:72923993-72924012 None:intergenic 40.0%
!!! TGCTCTAGTTTTGCACTTTG+TGG + chr5_2:72924083-72924102 Msa0787260:three_prime_UTR 40.0%
!!! CTAGTTTTGCACTTTGTGGT+TGG + chr5_2:72924087-72924106 Msa0787260:three_prime_UTR 40.0%
CATGCATTTCCTGTATTCAG+AGG + chr5_2:72924119-72924138 Msa0787260:three_prime_UTR 40.0%
TTTGTGTGTCGGACCAACAA+GGG - chr5_2:72917022-72917041 None:intergenic 45.0%
! TTTTGTGTGTCGGACCAACA+AGG - chr5_2:72917023-72917042 None:intergenic 45.0%
GAAGAGATGCGAACCATTGA+AGG + chr5_2:72917195-72917214 Msa0787260:CDS 45.0%
CCGACCCAGAAAGTAAAAGT+AGG - chr5_2:72917370-72917389 None:intergenic 45.0%
GTCATGCTCGATTCACTTAC+TGG + chr5_2:72917389-72917408 Msa0787260:intron 45.0%
! ACTGTTTTCACTTGTCACCG+TGG + chr5_2:72917418-72917437 Msa0787260:intron 45.0%
! GGGCACACTGCAATAAGTTT+TGG + chr5_2:72917567-72917586 Msa0787260:intron 45.0%
CGTTTGTGACTGAGAAGAGT+GGG + chr5_2:72918442-72918461 Msa0787260:intron 45.0%
TTTATCGCTGGCCCATGTTA+AGG - chr5_2:72918553-72918572 None:intergenic 45.0%
AAAGGGGGCCAAGAATTATG+GGG + chr5_2:72918612-72918631 Msa0787260:intron 45.0%
CCTGTAAGCCCCATAATTCT+TGG - chr5_2:72918623-72918642 None:intergenic 45.0%
CCAAGAATTATGGGGCTTAC+AGG + chr5_2:72918620-72918639 Msa0787260:intron 45.0%
ATGCGAAGTGACAGTGTAGT+TGG + chr5_2:72918692-72918711 Msa0787260:intron 45.0%
TGCGAAGTGACAGTGTAGTT+GGG + chr5_2:72918693-72918712 Msa0787260:intron 45.0%
AGTGACAGTGTAGTTGGGAA+TGG + chr5_2:72918698-72918717 Msa0787260:intron 45.0%
GTGACAGTGTAGTTGGGAAT+GGG + chr5_2:72918699-72918718 Msa0787260:intron 45.0%
TGACAGTGTAGTTGGGAATG+GGG + chr5_2:72918700-72918719 Msa0787260:intron 45.0%
TGATGCGAAGTCAGTGTAGT+TGG + chr5_2:72918776-72918795 Msa0787260:intron 45.0%
GATGCGAAGTCAGTGTAGTT+GGG + chr5_2:72918777-72918796 Msa0787260:intron 45.0%
GAAGTCAGTGTAGTTGGGAA+TGG + chr5_2:72918782-72918801 Msa0787260:intron 45.0%
! CTCGGGAAAGATTTTTGTGG+CGG + chr5_2:72919044-72919063 Msa0787260:intron 45.0%
! GTATGATTTGGGTCTGCGTT+TGG + chr5_2:72919137-72919156 Msa0787260:intron 45.0%
TGAACATGCTTCTAGCAACC+TGG - chr5_2:72919208-72919227 None:intergenic 45.0%
! TAGGTTGTGGGATTGGTGAT+AGG + chr5_2:72919373-72919392 Msa0787260:intron 45.0%
CCATCCCACATAAAGACATG+TGG - chr5_2:72919472-72919491 None:intergenic 45.0%
CCACATGTCTTTATGTGGGA+TGG + chr5_2:72919469-72919488 Msa0787260:intron 45.0%
TTTATGTGGGATGGCATCAG+TGG + chr5_2:72919478-72919497 Msa0787260:intron 45.0%
TGTTGGAGGAGGCTTATTGA+TGG + chr5_2:72919516-72919535 Msa0787260:intron 45.0%
CAACTTTGCACCCACTTTGT+AGG + chr5_2:72919707-72919726 Msa0787260:intron 45.0%
AATAGGGGGCCAGAAAGTTT+GGG - chr5_2:72919820-72919839 None:intergenic 45.0%
! TTTTGTTGGGCCTAGTTGAG+GGG + chr5_2:72919881-72919900 Msa0787260:intron 45.0%
ACTGTTGAGCAGTAGTGAGA+AGG - chr5_2:72919949-72919968 None:intergenic 45.0%
AATGAGGTTTACGGCGGTTA+TGG - chr5_2:72920022-72920041 None:intergenic 45.0%
ATAACCGCCGTAAACCTCAT+TGG + chr5_2:72920021-72920040 Msa0787260:intron 45.0%
CATACCAATGAGGTTTACGG+CGG - chr5_2:72920028-72920047 None:intergenic 45.0%
CGGAATCCTTCATACCAATG+AGG - chr5_2:72920038-72920057 None:intergenic 45.0%
TTTACTGAAGGTGGTGTGTG+TGG - chr5_2:72920073-72920092 None:intergenic 45.0%
ACACACACCACCTTCAGTAA+AGG + chr5_2:72920072-72920091 Msa0787260:intron 45.0%
TGTAAGGCCTTTACTGAAGG+TGG - chr5_2:72920082-72920101 None:intergenic 45.0%
TTCTGCTTCTGAATCTACGG+TGG - chr5_2:72920167-72920186 None:intergenic 45.0%
AGAAGCAGAAGCTTCATCGA+CGG + chr5_2:72920177-72920196 Msa0787260:intron 45.0%
! AGGAAGGTGTGAGATTTCGT+TGG + chr5_2:72920206-72920225 Msa0787260:intron 45.0%
!!! AAATTTTGAGATTCCGGCGG+CGG + chr5_2:72920251-72920270 Msa0787260:intron 45.0%
AAGAGGGCCGAAAAACATCA+AGG - chr5_2:72920590-72920609 None:intergenic 45.0%
TCTCGTCTCTATACAGTCTG+TGG - chr5_2:72920950-72920969 None:intergenic 45.0%
AGAGACGAGAACACTGAAGT+TGG + chr5_2:72920960-72920979 Msa0787260:intron 45.0%
GAGAACACTGAAGTTGGAGA+TGG + chr5_2:72920966-72920985 Msa0787260:intron 45.0%
AACACTGAAGTTGGAGATGG+AGG + chr5_2:72920969-72920988 Msa0787260:intron 45.0%
ACACTGAAGTTGGAGATGGA+GGG + chr5_2:72920970-72920989 Msa0787260:intron 45.0%
AGGTCAAACCACAGACTACT+TGG + chr5_2:72921010-72921029 Msa0787260:intron 45.0%
! GCATTTTCTCACGTGGTACA+TGG - chr5_2:72921092-72921111 None:intergenic 45.0%
!! AAACGGGTTTTGTGACCACT+AGG + chr5_2:72921356-72921375 Msa0787260:intron 45.0%
CTAATGAGCGTTATCCGATC+TGG - chr5_2:72921489-72921508 None:intergenic 45.0%
CAGATCGGATAACGCTCATT+AGG + chr5_2:72921487-72921506 Msa0787260:CDS 45.0%
GATCGGATAACGCTCATTAG+GGG + chr5_2:72921489-72921508 Msa0787260:CDS 45.0%
GTGTGATCTGACGACTTTCA+TGG - chr5_2:72921518-72921537 None:intergenic 45.0%
TGAAAGTCGTCAGATCACAC+AGG + chr5_2:72921518-72921537 Msa0787260:CDS 45.0%
GGTTTGTCTATTAGCGGAAG+TGG + chr5_2:72921539-72921558 Msa0787260:intron 45.0%
ACCGTATACCTGTCAAGTGA+TGG - chr5_2:72921645-72921664 None:intergenic 45.0%
GTTTCTATGACGAGTGCCTT+CGG + chr5_2:72921663-72921682 Msa0787260:intron 45.0%
! TGACTAGTTGTTGGGGTCTT+GGG - chr5_2:72921903-72921922 None:intergenic 45.0%
! AAGGCTCTGACTAGTTGTTG+GGG - chr5_2:72921910-72921929 None:intergenic 45.0%
! CAAGGCTCTGACTAGTTGTT+GGG - chr5_2:72921911-72921930 None:intergenic 45.0%
! ACAAGGCTCTGACTAGTTGT+TGG - chr5_2:72921912-72921931 None:intergenic 45.0%
GAGAGATCTCAGCAACAGTA+TGG - chr5_2:72922074-72922093 None:intergenic 45.0%
ATACAGCATCCTTCGAGTCT+TGG - chr5_2:72922272-72922291 None:intergenic 45.0%
TAAGAGGAAAAGGGTTGAGG+TGG + chr5_2:72922313-72922332 Msa0787260:intron 45.0%
AAGAGGAAAAGGGTTGAGGT+GGG + chr5_2:72922314-72922333 Msa0787260:intron 45.0%
!! CACCGCACTCTTTTAGAGAT+TGG + chr5_2:72922406-72922425 Msa0787260:intron 45.0%
! GCCCAATCTCTAAAAGAGTG+CGG - chr5_2:72922411-72922430 None:intergenic 45.0%
TGCAGCCTCATTCGATAAAC+GGG - chr5_2:72922435-72922454 None:intergenic 45.0%
GTTTATCGAATGAGGCTGCA+TGG + chr5_2:72922435-72922454 Msa0787260:intron 45.0%
!! AAGCAAGAGGTACCTCATGA+CGG + chr5_2:72922870-72922889 Msa0787260:CDS 45.0%
CAGCCATCCACAATATCTTC+AGG - chr5_2:72922924-72922943 None:intergenic 45.0%
CTGAAGATATTGTGGATGGC+TGG + chr5_2:72922922-72922941 Msa0787260:CDS 45.0%
GAAGATATTGTGGATGGCTG+GGG + chr5_2:72922924-72922943 Msa0787260:CDS 45.0%
AAACAAGAAACCAGCACCAC+GGG - chr5_2:72922958-72922977 None:intergenic 45.0%
CAAACAAGAAACCAGCACCA+CGG - chr5_2:72922959-72922978 None:intergenic 45.0%
! TTTGGTGGCAGTGTTGTTAC+TGG + chr5_2:72922975-72922994 Msa0787260:CDS 45.0%
TATATGCCGAGCTCATCAGT+TGG + chr5_2:72923025-72923044 Msa0787260:CDS 45.0%
CCATTACCAACTGATGAGCT+CGG - chr5_2:72923034-72923053 None:intergenic 45.0%
!! GCTCATCAGTTGGTAATGGA+AGG + chr5_2:72923035-72923054 Msa0787260:CDS 45.0%
! TGGTAATGTAGCTGCGATTC+TGG + chr5_2:72923208-72923227 Msa0787260:CDS 45.0%
ACTTTGCCAACAAACCTGTG+GGG - chr5_2:72923279-72923298 None:intergenic 45.0%
GACTTTGCCAACAAACCTGT+GGG - chr5_2:72923280-72923299 None:intergenic 45.0%
TGACTTTGCCAACAAACCTG+TGG - chr5_2:72923281-72923300 None:intergenic 45.0%
CCCTGATACGTAGATTCAGT+AGG - chr5_2:72923469-72923488 None:intergenic 45.0%
GGGATAATTGTCAGTTCTCG+AGG + chr5_2:72923755-72923774 Msa0787260:three_prime_UTR 45.0%
TTGGGAGTCCATATAACCTG+TGG + chr5_2:72923974-72923993 Msa0787260:three_prime_UTR 45.0%
!! TAAAAAAAAAAAAAAAAAAG+AGG - chr5_2:72917329-72917348 None:intergenic 5.0%
!!! TTTTTTTTTTAAATATTGAT+TGG + chr5_2:72918058-72918077 Msa0787260:intron 5.0%
!!! TTTTATTTTCTTTATTTTTT+AGG + chr5_2:72921184-72921203 Msa0787260:intron 5.0%
GAGAGATGTCAGACCTAGAC+AGG + chr5_2:72917158-72917177 Msa0787260:exon 50.0%
GTTGCTCTATCTGCCTGTCT+AGG - chr5_2:72917174-72917193 None:intergenic 50.0%
GCGTTTGTGACTGAGAAGAG+TGG + chr5_2:72918441-72918460 Msa0787260:intron 50.0%
!! TCTGCTTTTGCTCGCTCTCA+AGG + chr5_2:72919003-72919022 Msa0787260:CDS 50.0%
TGGTTGTTGGTGCACTTGGA+TGG + chr5_2:72919614-72919633 Msa0787260:intron 50.0%
ATAGGGGGCCAGAAAGTTTG+GGG - chr5_2:72919819-72919838 None:intergenic 50.0%
GAATAGGGGGCCAGAAAGTT+TGG - chr5_2:72919821-72919840 None:intergenic 50.0%
TTTGTTGGGCCTAGTTGAGG+GGG + chr5_2:72919882-72919901 Msa0787260:intron 50.0%
! GAGAATACGGCGGTTTTACG+GGG - chr5_2:72919989-72920008 None:intergenic 50.0%
! GGAGAATACGGCGGTTTTAC+GGG - chr5_2:72919990-72920009 None:intergenic 50.0%
! CGGAGAATACGGCGGTTTTA+CGG - chr5_2:72919991-72920010 None:intergenic 50.0%
TGGAGGTCGAACGGAGAATA+CGG - chr5_2:72920002-72920021 None:intergenic 50.0%
TGGTATGAAGGATTCCGACC+AGG + chr5_2:72920041-72920060 Msa0787260:intron 50.0%
CCTCCGGAATCGTAACTTTC+CGG + chr5_2:72920131-72920150 Msa0787260:intron 50.0%
ATCGCCATCGTGAGTGTGTT+CGG + chr5_2:72920300-72920319 Msa0787260:intron 50.0%
TTTCGGCCCTCTTTGATGTG+TGG + chr5_2:72920597-72920616 Msa0787260:intron 50.0%
TTCGGCCCTCTTTGATGTGT+GGG + chr5_2:72920598-72920617 Msa0787260:intron 50.0%
AATGAGGGGTGACTAGTGAG+AGG + chr5_2:72920687-72920706 Msa0787260:intron 50.0%
! GGCTCTATAGTGCTATTGCG+CGG + chr5_2:72920744-72920763 Msa0787260:intron 50.0%
GAGAACACTGAAGTTGGAGG+TGG + chr5_2:72920895-72920914 Msa0787260:intron 50.0%
AACACTGAAGTTGGAGGTGG+AGG + chr5_2:72920898-72920917 Msa0787260:intron 50.0%
ACACTGAAGTTGGAGGTGGA+GGG + chr5_2:72920899-72920918 Msa0787260:intron 50.0%
GACGAGTGCCTTCGGAAATA+TGG + chr5_2:72921671-72921690 Msa0787260:intron 50.0%
GTCTTTCCTTTCGCGGAGTA+AGG + chr5_2:72921860-72921879 Msa0787260:intron 50.0%
TAGTTGTTGGGGTCTTGGGA+GGG - chr5_2:72921899-72921918 None:intergenic 50.0%
! CTGACTAGTTGTTGGGGTCT+TGG - chr5_2:72921904-72921923 None:intergenic 50.0%
! TCCGTCTGTTTTGTGGGTAC+AGG + chr5_2:72922099-72922118 Msa0787260:intron 50.0%
CCCTGTACCCACAAAACAGA+CGG - chr5_2:72922103-72922122 None:intergenic 50.0%
! CCGTCTGTTTTGTGGGTACA+GGG + chr5_2:72922100-72922119 Msa0787260:intron 50.0%
! CGTCTGTTTTGTGGGTACAG+GGG + chr5_2:72922101-72922120 Msa0787260:intron 50.0%
TTAGAGGAACGGGGTTTAGG+TGG + chr5_2:72922230-72922249 Msa0787260:intron 50.0%
TAGGTGGATAGGAGCTAGCT+AGG + chr5_2:72922246-72922265 Msa0787260:intron 50.0%
TGACCATAGGAGGTCACACA+TGG - chr5_2:72922898-72922917 None:intergenic 50.0%
CTTCAGGATCTGACCATAGG+AGG - chr5_2:72922908-72922927 None:intergenic 50.0%
AACAAGAAACCAGCACCACG+GGG - chr5_2:72922957-72922976 None:intergenic 50.0%
!! CGTGGTGCTGGTTTCTTGTT+TGG + chr5_2:72922957-72922976 Msa0787260:CDS 50.0%
!! GGTGCTGGTTTCTTGTTTGG+TGG + chr5_2:72922960-72922979 Msa0787260:CDS 50.0%
!! CCGAGCTCATCAGTTGGTAA+TGG + chr5_2:72923031-72923050 Msa0787260:CDS 50.0%
!! GCTGCGATTCTGGAGTTAGA+CGG + chr5_2:72923218-72923237 Msa0787260:CDS 50.0%
! AATGTGCCGCTAATGCATCG+CGG + chr5_2:72923428-72923447 Msa0787260:intron 50.0%
TTGCAACCGCGATGCATTAG+CGG - chr5_2:72923437-72923456 None:intergenic 50.0%
!! GTAGTCTGGTGCTGGTTTCT+TGG - chr5_2:72923646-72923665 None:intergenic 50.0%
ACACGAATTGACAAACGGCG+AGG + chr5_2:72923704-72923723 Msa0787260:three_prime_UTR 50.0%
! TGGGTCTGCGTTTGGCTCAA+TGG + chr5_2:72919145-72919164 Msa0787260:intron 55.0%
! TGGCTGGTTGTTGGTGCACT+TGG + chr5_2:72919610-72919629 Msa0787260:intron 55.0%
! GCTTAGGGGCCCTTGTTTGA+AGG + chr5_2:72919904-72919923 Msa0787260:intron 55.0%
AGGTCGAACGGAGAATACGG+CGG - chr5_2:72919999-72920018 None:intergenic 55.0%
GAGGTTTACGGCGGTTATGG+AGG - chr5_2:72920019-72920038 None:intergenic 55.0%
GTGTGTGGCGTTTACCTGGT+CGG - chr5_2:72920058-72920077 None:intergenic 55.0%
TGGTGTGTGTGGCGTTTACC+TGG - chr5_2:72920062-72920081 None:intergenic 55.0%
CCGGAAAGTTACGATTCCGG+AGG - chr5_2:72920134-72920153 None:intergenic 55.0%
CCGCCGGAAAGTTACGATTC+CGG - chr5_2:72920137-72920156 None:intergenic 55.0%
CCGGAATCGTAACTTTCCGG+CGG + chr5_2:72920134-72920153 Msa0787260:intron 55.0%
! AGCTTCATCGACGGTGTCAG+AGG + chr5_2:72920186-72920205 Msa0787260:intron 55.0%
! TCATCGACGGTGTCAGAGGA+AGG + chr5_2:72920190-72920209 Msa0787260:intron 55.0%
GAACACACTCACGATGGCGA+TGG - chr5_2:72920301-72920320 None:intergenic 55.0%
! AGTGCCGAACACACTCACGA+TGG - chr5_2:72920307-72920326 None:intergenic 55.0%
CCCAGCCCACACATCAAAGA+GGG - chr5_2:72920606-72920625 None:intergenic 55.0%
CCCTCTTTGATGTGTGGGCT+GGG + chr5_2:72920603-72920622 Msa0787260:intron 55.0%
AGACAGCCTTACTCCGCGAA+AGG - chr5_2:72921869-72921888 None:intergenic 55.0%
CTAGTTGTTGGGGTCTTGGG+AGG - chr5_2:72921900-72921919 None:intergenic 55.0%
GGAACGGGGTTTAGGTGGAT+AGG + chr5_2:72922235-72922254 Msa0787260:intron 55.0%
CTAGCTAGGCCAAGACTCGA+AGG + chr5_2:72922260-72922279 Msa0787260:intron 55.0%
GGGCACCCGTTTATCGAATG+AGG + chr5_2:72922427-72922446 Msa0787260:intron 55.0%
TCACACATGGCACCGTCATG+AGG - chr5_2:72922885-72922904 None:intergenic 55.0%
GTGCCATGTGTGACCTCCTA+TGG + chr5_2:72922892-72922911 Msa0787260:CDS 55.0%
TGTGTTTGATGCTGCCCCAC+AGG + chr5_2:72923262-72923281 Msa0787260:CDS 55.0%
ATGCTGCCCCACAGGTTTGT+TGG + chr5_2:72923270-72923289 Msa0787260:intron 55.0%
ACATTAGGGTCTCCCCACCA+AGG + chr5_2:72923555-72923574 Msa0787260:intron 55.0%
!! TCTGGTGCTGGTTTCTTGGC+AGG - chr5_2:72923642-72923661 None:intergenic 55.0%
CGGCGAGGAGATGTCTGTAA+CGG + chr5_2:72923719-72923738 Msa0787260:three_prime_UTR 55.0%
GGCGAGGAGATGTCTGTAAC+GGG + chr5_2:72923720-72923739 Msa0787260:three_prime_UTR 55.0%
! GAGGAGATGTCTGTAACGGG+AGG + chr5_2:72923723-72923742 Msa0787260:three_prime_UTR 55.0%
! TGTAACGGGAGGAATCAGCG+AGG + chr5_2:72923734-72923753 Msa0787260:three_prime_UTR 55.0%
! GTAACGGGAGGAATCAGCGA+GGG + chr5_2:72923735-72923754 Msa0787260:three_prime_UTR 55.0%
GTTCTCGAGGCAGAAGAGTC+TGG + chr5_2:72923768-72923787 Msa0787260:three_prime_UTR 55.0%
GGCCTAGTTGAGGGGGCTTA+GGG + chr5_2:72919889-72919908 Msa0787260:intron 60.0%
GCCTAGTTGAGGGGGCTTAG+GGG + chr5_2:72919890-72919909 Msa0787260:intron 60.0%
! ACGGCGGTTTTACGGGGAAG+TGG - chr5_2:72919983-72920002 None:intergenic 60.0%
CGGCGGTTATGGAGGTCGAA+CGG - chr5_2:72920011-72920030 None:intergenic 60.0%
ACAGAATCTCACACCGCCGC+CGG - chr5_2:72920267-72920286 None:intergenic 60.0%
GCGGCGGTGTGAGATTCTGT+TGG + chr5_2:72920267-72920286 Msa0787260:intron 60.0%
GCCCTCTTTGATGTGTGGGC+TGG + chr5_2:72920602-72920621 Msa0787260:intron 60.0%
GCCCAGCCCACACATCAAAG+AGG - chr5_2:72920607-72920626 None:intergenic 60.0%
TTAGGGTCTCCCCACCAAGG+AGG + chr5_2:72923558-72923577 Msa0787260:intron 60.0%
GGGCCTAGTTGAGGGGGCTT+AGG + chr5_2:72919888-72919907 Msa0787260:intron 65.0%
GCCCCTAAGCCCCCTCAACT+AGG - chr5_2:72919894-72919913 None:intergenic 65.0%
CTACGGTGGATGCAGACCGC+CGG - chr5_2:72920153-72920172 None:intergenic 65.0%
GGTTTGAGTCCCCGTGGTGC+TGG + chr5_2:72922945-72922964 Msa0787260:CDS 65.0%
GGCTGGGGTTTGAGTCCCCG+TGG + chr5_2:72922939-72922958 Msa0787260:CDS 70.0%
Chromosome Type Strat End Strand Name
chr5_2 gene 72917010 72924235 72917010 ID=Msa0787260;Name=Msa0787260
chr5_2 mRNA 72917010 72924235 72917010 ID=Msa0787260-mRNA-1;Parent=Msa0787260;Name=Msa0787260-mRNA-1;_AED=0.24;_eAED=0.24;_QI=153|0.71|0.87|1|0.85|0.87|8|561|301
chr5_2 exon 72917010 72917303 72917010 ID=Msa0787260-mRNA-1:exon:22228;Parent=Msa0787260-mRNA-1
chr5_2 exon 72918872 72919024 72918872 ID=Msa0787260-mRNA-1:exon:22229;Parent=Msa0787260-mRNA-1
chr5_2 exon 72921477 72921539 72921477 ID=Msa0787260-mRNA-1:exon:22230;Parent=Msa0787260-mRNA-1
chr5_2 exon 72922121 72922194 72922121 ID=Msa0787260-mRNA-1:exon:22231;Parent=Msa0787260-mRNA-1
chr5_2 exon 72922689 72922764 72922689 ID=Msa0787260-mRNA-1:exon:22232;Parent=Msa0787260-mRNA-1
chr5_2 exon 72922852 72923120 72922852 ID=Msa0787260-mRNA-1:exon:22233;Parent=Msa0787260-mRNA-1
chr5_2 exon 72923205 72923283 72923205 ID=Msa0787260-mRNA-1:exon:22234;Parent=Msa0787260-mRNA-1
chr5_2 exon 72923624 72924235 72923624 ID=Msa0787260-mRNA-1:exon:22235;Parent=Msa0787260-mRNA-1
chr5_2 five_prime_UTR 72917010 72917162 72917010 ID=Msa0787260-mRNA-1:five_prime_utr;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72917163 72917303 72917163 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72918872 72919024 72918872 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72921477 72921539 72921477 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72922121 72922194 72922121 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72922689 72922764 72922689 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72922852 72923120 72922852 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72923205 72923283 72923205 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 CDS 72923624 72923674 72923624 ID=Msa0787260-mRNA-1:cds;Parent=Msa0787260-mRNA-1
chr5_2 three_prime_UTR 72923675 72924235 72923675 ID=Msa0787260-mRNA-1:three_prime_utr;Parent=Msa0787260-mRNA-1
Gene Sequence

>Msa0787260

ATGTCAGACCTAGACAGGCAGATAGAGCAACTGAAGAGATGCGAACCATTGAAGGAATCTGAAGTCAAATCTCTCTGTCTCAAAGCCATCGAAATTCTTGTTGAAGAAAGCAATGTTCAAAGGGTTGATGCTCCTGTCACTATATGTGGGGATATTCACGGACAGTTTTATGACATGAAGGAGCTTTTTAAAGTTGGTGGTGATTGCCCTAAAACAAATTATTTGTTCCTTGGGGATTTTGTTGATAGAGGATTTTACTCCGTTGAAACGTTTCTGCTTTTGCTCGCTCTCAAGGTGAGATATCCAGATCGGATAACGCTCATTAGGGGAAACCATGAAAGTCGTCAGATCACACAGGGGCCACGTGTGATTTTCTTTGTTATTCTTTCGACTGTCAAATTCATGATTGAAGGGTGTCTACCATTGACACTCTTGTCTGCTCTAATTGAAAACAAGATTTTCAGTGTTCATGGTGGTCTTTCTCCTGCTATTTCAACATTGGATCAGATACGAACTATTGATAGAAAGCAAGAGGTACCTCATGACGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGCTGGGGTTTGAGTCCCCGTGGTGCTGGTTTCTTGTTTGGTGGCAGTGTTGTTACTGGTTTTAACCACACCAATAACATTGACTATATATGCCGAGCTCATCAGTTGGTAATGGAAGGATATAAATGGATGTTCAATAATCAGATAGTTACTGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGTAATGTAGCTGCGATTCTGGAGTTAGACGGTAATCTTAATAAGCAGTTTCGTGTGTTTGATGCTGCCCCACAGGAATCAAGAGGTGCACCTGCCAAGAAACCAGCACCAGACTACTTCTTATAA
Protein sequence

>Msa0787260

MSDLDRQIEQLKRCEPLKESEVKSLCLKAIEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQGPRVIFFVILSTVKFMIEGCLPLTLLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTGFNHTNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFDAAPQESRGAPAKKPAPDYFL*