AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0863370

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863370 MtrunA17_Chr5g0445011 90.584 308 19 2 1 301 1 305 0.0 560
Msa0863370 MtrunA17_Chr8g0364041 59.935 307 111 5 2 301 5 306 7.78e-129 369
Msa0863370 MtrunA17_Chr5g0415261 59.935 307 111 5 2 301 5 306 1.44e-127 365
Msa0863370 MtrunA17_Chr8g0378521 59.283 307 111 5 3 301 8 308 6.46e-127 364
Msa0863370 MtrunA17_Chr7g0268381 57.692 312 108 6 3 301 13 313 1.15e-126 363
Msa0863370 MtrunA17_Chr1g0165341 52.443 307 133 5 3 301 2 303 2.28e-111 324
Msa0863370 MtrunA17_Chr1g0190121 43.772 281 143 3 17 288 26 300 3.49e-82 251
Msa0863370 MtrunA17_Chr7g0274931 42.088 297 149 4 17 296 26 316 5.31e-81 248
Msa0863370 MtrunA17_Chr5g0436061 40.584 308 163 4 1 294 22 323 6.00e-81 248
Msa0863370 MtrunA17_Chr1g0186811 43.816 283 147 3 17 290 26 305 1.62e-79 244
Msa0863370 MtrunA17_Chr7g0272371 43.706 286 146 3 17 293 28 307 2.02e-79 243
Msa0863370 MtrunA17_Chr1g0167751 44.689 273 136 3 17 280 26 292 2.74e-79 243
Msa0863370 MtrunA17_Chr8g0387541 40.753 292 155 4 17 296 27 312 4.81e-78 240
Msa0863370 MtrunA17_Chr8g0334361 42.424 297 147 5 1 280 1 290 1.93e-77 238
Msa0863370 MtrunA17_Chr3g0097231 37.288 295 168 8 4 285 175 465 1.20e-52 179
Msa0863370 MtrunA17_Chr2g0322121 38.929 280 136 8 20 273 667 937 1.06e-47 171
Msa0863370 MtrunA17_Chr4g0025471 39.568 278 137 7 20 273 672 942 1.26e-47 171
Msa0863370 MtrunA17_Chr2g0330311 41.200 250 132 9 46 285 248 492 6.23e-47 164
Msa0863370 MtrunA17_Chr2g0330331 36.644 292 171 8 4 283 40 329 2.09e-46 159
Msa0863370 MtrunA17_Chr1g0196211 36.757 185 94 7 99 266 2 180 5.84e-25 100
Msa0863370 MtrunA17_Chr8g0369981 29.070 344 162 12 24 291 100 437 3.53e-23 99.0
Msa0863370 MtrunA17_Chr1g0196221 47.191 89 41 1 17 99 548 636 1.04e-16 80.5
Msa0863370 MtrunA17_Chr2g0330011 41.176 119 62 3 14 125 224 341 1.07e-16 79.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0863370 AT5G55260.1 86.039 308 33 2 1 301 1 305 0.0 535
Msa0863370 AT4G26720.1 83.607 305 46 1 1 301 1 305 0.0 521
Msa0863370 AT5G55260.2 75.931 349 33 3 1 301 1 346 0.0 515
Msa0863370 AT2G42500.1 58.958 307 112 5 3 301 13 313 4.96e-128 367
Msa0863370 AT3G58500.1 58.632 307 113 5 3 301 13 313 1.22e-127 366
Msa0863370 AT1G69960.1 59.223 309 108 5 3 301 7 307 1.29e-126 363
Msa0863370 AT1G10430.2 58.576 309 110 5 3 301 6 306 2.59e-126 363
Msa0863370 AT1G10430.1 58.576 309 110 5 3 301 6 306 2.59e-126 363
Msa0863370 AT1G59830.1 59.223 309 108 5 3 301 6 306 6.57e-126 362
Msa0863370 AT1G50370.1 52.117 307 134 5 3 301 2 303 6.67e-111 323
Msa0863370 AT3G19980.1 52.117 307 134 5 3 301 2 303 1.65e-110 322
Msa0863370 AT1G59830.2 58.555 263 86 5 3 251 6 259 8.91e-104 304
Msa0863370 AT2G42500.2 48.534 307 97 6 3 301 13 266 3.28e-93 277
Msa0863370 AT1G64040.1 42.088 297 147 4 17 294 27 317 3.37e-80 246
Msa0863370 AT5G59160.3 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0863370 AT5G59160.2 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0863370 AT5G59160.1 43.060 281 145 3 17 288 36 310 4.04e-80 245
Msa0863370 AT2G39840.1 41.060 302 158 4 1 288 19 314 4.68e-80 246
Msa0863370 AT5G43380.1 42.088 297 150 4 17 297 26 316 8.32e-80 245
Msa0863370 AT5G43380.2 42.088 297 150 4 17 297 26 316 1.32e-79 244
Msa0863370 AT5G43380.3 42.088 297 150 4 17 297 26 316 1.41e-79 244
Msa0863370 AT2G29400.1 40.924 303 156 5 1 287 20 315 1.58e-79 244
Msa0863370 AT4G11240.1 43.416 281 144 3 17 288 27 301 2.92e-79 244
Msa0863370 AT5G27840.1 43.750 288 147 3 17 295 32 313 4.44e-79 243
Msa0863370 AT3G05580.1 43.750 288 147 3 17 295 32 313 7.80e-79 242
Msa0863370 AT5G27840.4 44.251 287 144 4 17 294 32 311 9.46e-79 243
Msa0863370 AT5G27840.2 44.251 287 144 4 17 294 32 311 9.79e-79 242
Msa0863370 AT5G27840.3 44.251 287 144 4 17 294 32 311 9.79e-79 242
Msa0863370 AT3G46820.1 42.349 281 147 3 17 288 36 310 3.29e-77 238
Msa0863370 AT3G05580.2 46.256 227 107 3 17 234 32 252 9.68e-65 204
Msa0863370 AT2G42500.3 67.500 120 36 1 3 119 13 132 1.47e-52 170
Msa0863370 AT2G42500.4 67.500 120 36 1 3 119 13 132 1.83e-52 170
Msa0863370 AT2G42810.1 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0863370 AT2G42810.5 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0863370 AT2G42810.4 37.329 292 164 7 8 285 181 467 2.71e-52 178
Msa0863370 AT2G42500.5 67.500 120 36 1 3 119 13 132 2.80e-52 169
Msa0863370 AT2G42810.3 37.329 292 164 7 8 285 234 520 7.82e-52 178
Msa0863370 AT2G42810.2 37.329 292 164 7 8 285 235 521 8.20e-52 178
Msa0863370 AT4G03080.1 40.809 272 136 7 17 267 550 817 2.87e-51 181
Msa0863370 AT2G27210.1 38.489 278 140 7 20 273 678 948 9.56e-46 166
Msa0863370 AT2G27210.2 38.489 278 140 7 20 273 673 943 1.01e-45 166
Msa0863370 AT1G03445.1 38.433 268 139 9 21 267 480 742 2.23e-45 164
Msa0863370 AT1G03445.2 38.433 268 139 9 21 267 480 742 2.53e-45 164
Msa0863370 AT1G08420.2 38.129 278 141 7 20 273 684 954 5.21e-45 163
Msa0863370 AT1G08420.1 38.129 278 141 7 20 273 689 959 5.27e-45 163
Msa0863370 AT5G63870.1 29.412 340 162 12 24 291 52 385 7.37e-28 112
Msa0863370 AT5G63870.2 29.412 340 162 12 24 291 52 385 7.37e-28 112
Msa0863370 AT5G63870.3 33.061 245 109 9 24 219 52 290 3.16e-24 100
Msa0863370 AT5G10900.3 27.059 255 136 9 17 233 191 433 2.97e-18 85.5
Msa0863370 AT5G10900.1 27.059 255 136 9 17 233 191 433 3.44e-18 85.1
Msa0863370 AT5G10900.2 27.059 255 136 9 17 233 191 433 3.73e-18 85.1
Msa0863370 AT1G48120.1 28.428 299 143 9 25 256 631 925 4.71e-17 82.0

Find 103 sgRNAs with CRISPR-Local

Find 554 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATCATTCAATTATACTTCT+TGG 0.213493 5_4:+63148285 None:intergenic
CAGATCGGATAACGCTTATT+AGG 0.216606 5_4:-63143777 Msa0863370:CDS
TGGATTTGATCAGGGAATAT+TGG 0.236618 5_4:-63141302 Msa0863370:three_prime_UTR
AGTTTGTGATTTGCAATATA+TGG 0.239251 5_4:-63141421 Msa0863370:three_prime_UTR
TTTGGTGGCAGTGTTGTTAC+TGG 0.261554 5_4:-63142289 Msa0863370:CDS
TGGTAATGTAGCTGCGATTC+TGG 0.299247 5_4:-63142056 Msa0863370:CDS
AGAATTTGATTAGAAAGAAT+TGG 0.299797 5_4:-63141322 Msa0863370:three_prime_UTR
AAACAAATTATTTGTTCCTT+GGG 0.304724 5_4:-63146328 Msa0863370:CDS
AAAACAAATTATTTGTTCCT+TGG 0.317436 5_4:-63146329 Msa0863370:CDS
GGATTTGATCAGGGAATATT+GGG 0.317468 5_4:-63141301 Msa0863370:three_prime_UTR
GTAGTCTGGTGCTGGTTTCT+TGG 0.317981 5_4:+63141614 None:intergenic
GCATATATAGTCAATGTTAT+TGG 0.326109 5_4:+63142255 None:intergenic
GGACAGAGGGTTTATTTAGA+AGG 0.332982 5_4:-63141367 Msa0863370:three_prime_UTR
AGAAAGAATTGGATTTGATC+AGG 0.335699 5_4:-63141311 Msa0863370:three_prime_UTR
ATGTACCTGTAGCAATAATT+TGG 0.338871 5_4:+63142160 None:intergenic
AGATCGGATAACGCTTATTA+GGG 0.342443 5_4:-63143776 Msa0863370:CDS
CGTGGTGCTGGTTTCTTGTT+TGG 0.342815 5_4:-63142307 Msa0863370:CDS
TGGTAATGGAAGGATATAAA+TGG 0.342924 5_4:-63142219 Msa0863370:CDS
TTGTGCATCGTTATTATTGT+AGG 0.349281 5_4:-63141457 Msa0863370:three_prime_UTR
GATATAGAAACAAAGAAATC+TGG 0.358640 5_4:+63141581 None:intergenic
TGCTATTTCAACATTGGATC+AGG 0.378795 5_4:-63142521 Msa0863370:intron
GTGTGATCTGACGACTTTCA+TGG 0.387381 5_4:+63143749 None:intergenic
TTGACTTCAGATTCCTTCAA+TGG 0.405396 5_4:+63148116 None:intergenic
AAACAAGAAACCAGCACCAC+GGG 0.415241 5_4:+63142309 None:intergenic
CTAATAAGCGTTATCCGATC+TGG 0.416921 5_4:+63143778 None:intergenic
TTCTCCTGCTATTTCAACAT+TGG 0.419861 5_4:-63142527 Msa0863370:CDS
TCTGGTGCTGGTTTCTTGGC+AGG 0.420120 5_4:+63141618 None:intergenic
GAATATCAAAACTTGAATAG+TGG 0.427016 5_4:+63141252 None:intergenic
AGGAGAGGAGCTTCCCTTGT+TGG 0.434085 5_4:-63148323 None:intergenic
GAAGAGATGCGAACCATTGA+AGG 0.435978 5_4:-63148129 Msa0863370:CDS
CTGGTTTATAAGAAGTAGTC+TGG 0.439160 5_4:+63141600 None:intergenic
CTGAAGATATTGTGGATGGC+TGG 0.450014 5_4:-63142342 Msa0863370:CDS
ACTGTCAAATTCATGATTGA+AGG 0.450377 5_4:-63143110 Msa0863370:CDS
GTTCTCGAGGCAGAAGAGTC+TGG 0.452873 5_4:-63141489 Msa0863370:three_prime_UTR
GTAAAGTAGCTTACGGTGAC+AGG 0.459189 5_4:+63148029 None:intergenic
TATAAGAAGTAGTCTGGTGC+TGG 0.462922 5_4:+63141606 None:intergenic
GGTTTGAGTCCCCGTGGTGC+TGG 0.466408 5_4:-63142319 Msa0863370:CDS
GTTGCTCTATCTGCCTGTCT+AGG 0.467674 5_4:+63148153 None:intergenic
GAAAGAATTGGATTTGATCA+GGG 0.470559 5_4:-63141310 Msa0863370:three_prime_UTR
CAGCCATCCACAATATCTTC+AGG 0.472514 5_4:+63142343 None:intergenic
TTTATTATGTGTAGATATGT+GGG 0.482339 5_4:-63146412 Msa0863370:intron
AATATCAAAACTTGAATAGT+GGG 0.486185 5_4:+63141253 None:intergenic
ACAAATGAACCTCTGAATAC+AGG 0.494503 5_4:+63141029 None:intergenic
TGATCCAATGTTGAAATAGC+AGG 0.495341 5_4:+63142523 None:intergenic
TTGAAGAAAGTAATGTTCAA+AGG 0.498696 5_4:-63148061 Msa0863370:CDS
CCGAGCTCATCAGTTGGTAA+TGG 0.500833 5_4:-63142233 Msa0863370:CDS
TGAAGAAAGTAATGTTCAAA+GGG 0.503089 5_4:-63148060 Msa0863370:CDS
ATAATCAGATAGTTACTGTC+TGG 0.506188 5_4:-63142189 Msa0863370:CDS
TGTGTTTGATGCTGCCCCAC+AGG 0.508629 5_4:-63142002 Msa0863370:intron
CAGCTCCAAATTATTGCTAC+AGG 0.516403 5_4:-63142165 Msa0863370:intron
GGCGAGGAGATGTCTGTAAC+GGG 0.517864 5_4:-63141537 Msa0863370:three_prime_UTR
GAAGATATTGTGGATGGCTG+GGG 0.521686 5_4:-63142340 Msa0863370:CDS
TGATTTGAAAATAAATAAAG+AGG 0.523175 5_4:-63148267 Msa0863370:five_prime_UTR
CATGCATTTCCTGTATTCAG+AGG 0.529033 5_4:-63141038 Msa0863370:three_prime_UTR
TGAAGATATTGTGGATGGCT+GGG 0.534107 5_4:-63142341 Msa0863370:CDS
CGTTCATTCATAACATGTGA+TGG 0.538243 5_4:-63141388 Msa0863370:three_prime_UTR
GAGAGATGTCAGACCTAGAC+AGG 0.540434 5_4:-63148166 Msa0863370:exon
AACAAATTATTTGTTCCTTG+GGG 0.541769 5_4:-63146327 Msa0863370:CDS
TTCTTCAACAAGGATTTCGA+TGG 0.555002 5_4:+63148076 None:intergenic
GGTGCTGGTTTCTTGTTTGG+TGG 0.563297 5_4:-63142304 Msa0863370:CDS
TAAAGTAGCTTACGGTGACA+GGG 0.567976 5_4:+63148030 None:intergenic
TAGATATGTGGGGATATTCA+CGG 0.568875 5_4:-63146401 Msa0863370:CDS
GTGCCATGTGTGACCTCCTA+TGG 0.570229 5_4:-63142372 Msa0863370:CDS
CTTCAGGATCTGACCATAGG+AGG 0.571711 5_4:+63142359 None:intergenic
CTGTCAAATTCATGATTGAA+GGG 0.573094 5_4:-63143109 Msa0863370:CDS
TGAATACACGAATTGACAAA+CGG 0.574680 5_4:-63141558 Msa0863370:three_prime_UTR
GTCAGATCCTGAAGATATTG+TGG 0.574883 5_4:-63142350 Msa0863370:CDS
TATAGTCAATGTTATTGGTG+TGG 0.577194 5_4:+63142260 None:intergenic
CATAACATGTGATGGACAGA+GGG 0.584205 5_4:-63141380 Msa0863370:three_prime_UTR
CCATTACCAACTGATGAGCT+CGG 0.585713 5_4:+63142233 None:intergenic
CAAACAAGAAACCAGCACCA+CGG 0.587533 5_4:+63142308 None:intergenic
AACTATTGATAGAAAGCAAG+AGG 0.588375 5_4:-63142407 Msa0863370:CDS
GCTCATCAGTTGGTAATGGA+AGG 0.596917 5_4:-63142229 Msa0863370:CDS
TATCTTCAGGATCTGACCAT+AGG 0.598419 5_4:+63142356 None:intergenic
ATCAGGTGAGATATCCAGAT+CGG 0.605328 5_4:-63143792 Msa0863370:intron
CGGCGAGGAGATGTCTGTAA+CGG 0.606668 5_4:-63141538 Msa0863370:three_prime_UTR
CTCTATCAACAAAATCCCCA+AGG 0.610370 5_4:+63146312 None:intergenic
TTATTATGTGTAGATATGTG+GGG 0.611235 5_4:-63146411 Msa0863370:intron
GGGATAATTGTCAGTTCTCG+AGG 0.612907 5_4:-63141502 Msa0863370:three_prime_UTR
TCATAACATGTGATGGACAG+AGG 0.626761 5_4:-63141381 Msa0863370:three_prime_UTR
CAGAAAGTAATACAAACACA+TGG 0.633617 5_4:-63141003 Msa0863370:three_prime_UTR
TGACCATAGGAGGTCACACA+TGG 0.639067 5_4:+63142369 None:intergenic
TTTGTGTGTCGGACCAACAA+GGG 0.644355 5_4:+63148310 None:intergenic
GGCTGGGGTTTGAGTCCCCG+TGG 0.645059 5_4:-63142325 Msa0863370:CDS
AAGCAAGAGGTACCTCATGA+CGG 0.645427 5_4:-63142394 Msa0863370:CDS
TCACACATGGCACCGTCATG+AGG 0.646416 5_4:+63142382 None:intergenic
TTGGGAGTCCATATAACCTG+TGG 0.650912 5_4:-63141283 Msa0863370:three_prime_UTR
TATATGCCGAGCTCATCAGT+TGG 0.653349 5_4:-63142239 Msa0863370:CDS
GCTGCGATTCTGGAGTTAGA+CGG 0.654007 5_4:-63142046 Msa0863370:CDS
GAACATTACTTTCTTCAACA+AGG 0.660079 5_4:+63148066 None:intergenic
GATCCTGAAGATATTGTGGA+TGG 0.671179 5_4:-63142346 Msa0863370:CDS
GATCGGATAACGCTTATTAG+GGG 0.672914 5_4:-63143775 Msa0863370:CDS
GAGGAGATGTCTGTAACGGG+AGG 0.677767 5_4:-63141534 Msa0863370:three_prime_UTR
CACATGTTATGAATGAACGA+AGG 0.679378 5_4:+63141392 None:intergenic
GTAACGGGAGGAATCAGCGA+GGG 0.687014 5_4:-63141522 Msa0863370:three_prime_UTR
TTATTGAAACAGGAATCAAG+AGG 0.689638 5_4:-63141645 Msa0863370:intron
AAAGTAGCTTACGGTGACAG+GGG 0.690351 5_4:+63148031 None:intergenic
ACACGAATTGACAAACGGCG+AGG 0.715893 5_4:-63141553 Msa0863370:three_prime_UTR
AACAAGAAACCAGCACCACG+GGG 0.719181 5_4:+63142310 None:intergenic
TGAAAGTCGTCAGATCACAC+AGG 0.735439 5_4:-63143746 Msa0863370:intron
ACTTTGCCAACAAACCTGTG+GGG 0.785006 5_4:+63141988 None:intergenic
TGTAACGGGAGGAATCAGCG+AGG 0.791474 5_4:-63141523 Msa0863370:three_prime_UTR
ATAACAAAGAAAATCACACG+TGG 0.807495 5_4:+63143140 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTGATTTAATATGTT+AGG - chr5_4:63141426-63141445 Msa0863370:three_prime_UTR 10.0%
!!! ATGAAATTGATTTTATTTTT+AGG - chr5_4:63141528-63141547 Msa0863370:three_prime_UTR 10.0%
!!! TGAAATTGATTTTATTTTTA+GGG - chr5_4:63141529-63141548 Msa0863370:three_prime_UTR 10.0%
!!! TTTTTTTACTATAATATGTT+AGG - chr5_4:63142194-63142213 Msa0863370:CDS 10.0%
!!! TGTATCATTTTATATATTTT+AGG - chr5_4:63142240-63142259 Msa0863370:CDS 10.0%
!!! GTATCATTTTATATATTTTA+GGG - chr5_4:63142241-63142260 Msa0863370:CDS 10.0%
!!! TTTTTTTATTTAAAAGAGAA+AGG - chr5_4:63142499-63142518 Msa0863370:intron 10.0%
!!! TTTTTTATTTAAAAGAGAAA+GGG - chr5_4:63142500-63142519 Msa0863370:intron 10.0%
!!! TTTTTAAATTTTATTGAAAC+AGG - chr5_4:63147608-63147627 Msa0863370:intron 10.0%
!! TGATTTGAAAATAAATAAAG+AGG - chr5_4:63140996-63141015 Msa0863370:three_prime_UTR 15.0%
!! AATTTGAGCAATAAAAAAAA+TGG + chr5_4:63141363-63141382 None:intergenic 15.0%
!! AATCAAAGTAATAATAAACT+TGG + chr5_4:63142031-63142050 None:intergenic 15.0%
!! ATAGTAAAAGAAAATCTAAA+TGG + chr5_4:63142139-63142158 None:intergenic 15.0%
!!! TTCTTTTACTATTATATGTT+AGG - chr5_4:63142147-63142166 Msa0863370:intron 15.0%
!! AGAAATTGTTAATTTATCAT+AGG - chr5_4:63143299-63143318 Msa0863370:intron 15.0%
!! AAAAATTAACTTATGGAATA+GGG + chr5_4:63143810-63143829 None:intergenic 15.0%
!! GAAATAAAATTCTGATATTA+TGG + chr5_4:63144432-63144451 None:intergenic 15.0%
!!! AACAAGAATTTTTTAAGTAT+TGG - chr5_4:63144487-63144506 Msa0863370:intron 15.0%
!!! ACAAGAATTTTTTAAGTATT+GGG - chr5_4:63144488-63144507 Msa0863370:intron 15.0%
!! AACAAAAAACAATAGTTAAA+CGG - chr5_4:63145338-63145357 Msa0863370:intron 15.0%
!!! TTTCTATTAAATTTCTGAAA+TGG - chr5_4:63146018-63146037 Msa0863370:intron 15.0%
!! AATCATTCAATTATACTTCT+TGG + chr5_4:63140981-63141000 None:intergenic 20.0%
!! AAAGTAAAAATGGAAAATGA+AGG + chr5_4:63141290-63141309 None:intergenic 20.0%
!!! ATTTTCCATTTTTACTTTCT+GGG - chr5_4:63141292-63141311 Msa0863370:three_prime_UTR 20.0%
!! TTGGAATTTCAATTTATCTA+GGG - chr5_4:63141474-63141493 Msa0863370:three_prime_UTR 20.0%
!! TGAACTTATGAATTAGAAAT+AGG - chr5_4:63141898-63141917 Msa0863370:intron 20.0%
!! TATGCAATAAAATAGATGTT+AGG - chr5_4:63142289-63142308 Msa0863370:CDS 20.0%
!! ATGCAATAAAATAGATGTTA+GGG - chr5_4:63142290-63142309 Msa0863370:CDS 20.0%
!!! CCTTTTAACTGAATTTTTTT+CGG + chr5_4:63142590-63142609 None:intergenic 20.0%
!! CGAAAAAAATTCAGTTAAAA+GGG - chr5_4:63142588-63142607 Msa0863370:intron 20.0%
!! GAAAAAAATTCAGTTAAAAG+GGG - chr5_4:63142589-63142608 Msa0863370:intron 20.0%
!! AAAAAAATTCAGTTAAAAGG+GGG - chr5_4:63142590-63142609 Msa0863370:intron 20.0%
!!! TTCAAGTTAATAGTATCATA+TGG - chr5_4:63142734-63142753 Msa0863370:intron 20.0%
!! TCAAGTTAATAGTATCATAT+GGG - chr5_4:63142735-63142754 Msa0863370:intron 20.0%
!!! TTTTATTATGTGTAGATATG+TGG - chr5_4:63142850-63142869 Msa0863370:intron 20.0%
!! TTTATTATGTGTAGATATGT+GGG - chr5_4:63142851-63142870 Msa0863370:intron 20.0%
!!! GGAACAAATAATTTGTTTTA+GGG + chr5_4:63142933-63142952 None:intergenic 20.0%
!!! AGGAACAAATAATTTGTTTT+AGG + chr5_4:63142934-63142953 None:intergenic 20.0%
!! AAAACAAATTATTTGTTCCT+TGG - chr5_4:63142934-63142953 Msa0863370:intron 20.0%
!! AAACAAATTATTTGTTCCTT+GGG - chr5_4:63142935-63142954 Msa0863370:intron 20.0%
!!! TGATAATCTTTTATTCTTCT+CGG - chr5_4:63143019-63143038 Msa0863370:intron 20.0%
!! ATTATAGAAATACGATCTTA+TGG - chr5_4:63143172-63143191 Msa0863370:intron 20.0%
!!! TTTTGTATGTTTTTGGATTT+TGG - chr5_4:63143248-63143267 Msa0863370:intron 20.0%
!! AATTTCTTGTAATTGTTGTA+AGG + chr5_4:63143286-63143305 None:intergenic 20.0%
!!! AATTTGTTCTTATGATTTCT+AGG - chr5_4:63143327-63143346 Msa0863370:intron 20.0%
!! AAAATTAACTTATGGAATAG+GGG + chr5_4:63143809-63143828 None:intergenic 20.0%
!! CAAAAATTAACTTATGGAAT+AGG + chr5_4:63143811-63143830 None:intergenic 20.0%
!!! CTATTCCATAAGTTAATTTT+TGG - chr5_4:63143809-63143828 Msa0863370:intron 20.0%
!! ACAAAAAATCATGACATATT+GGG + chr5_4:63143841-63143860 None:intergenic 20.0%
!! AACAAAAAATCATGACATAT+TGG + chr5_4:63143842-63143861 None:intergenic 20.0%
!!! AATATGTCATGATTTTTTGT+TGG - chr5_4:63143841-63143860 Msa0863370:intron 20.0%
!!! ATATGTCATGATTTTTTGTT+GGG - chr5_4:63143842-63143861 Msa0863370:intron 20.0%
!!! TGAGATTGAGTTTTTTTTTT+TGG - chr5_4:63144304-63144323 Msa0863370:intron 20.0%
!!! AAATCTGAAACTTGTTTAAT+TGG - chr5_4:63144335-63144354 Msa0863370:intron 20.0%
!!! CAAGAATTTTTTAAGTATTG+GGG - chr5_4:63144489-63144508 Msa0863370:intron 20.0%
!! TCAAAACTTGATCAAATTTA+TGG + chr5_4:63145261-63145280 None:intergenic 20.0%
!! ACAAAAAACAATAGTTAAAC+GGG - chr5_4:63145339-63145358 Msa0863370:intron 20.0%
!! AATAATGAATGAAAGTGAAA+GGG - chr5_4:63145561-63145580 Msa0863370:intron 20.0%
!!! TTCTCAACATTTTTTTACTT+CGG - chr5_4:63145602-63145621 Msa0863370:intron 20.0%
!!! TCTAGATATCTAGATTTTAT+TGG - chr5_4:63145752-63145771 Msa0863370:intron 20.0%
!! AAATAACCAAAAAGGAAAAT+AGG - chr5_4:63146532-63146551 Msa0863370:intron 20.0%
!! AATAACCAAAAAGGAAAATA+GGG - chr5_4:63146533-63146552 Msa0863370:intron 20.0%
!! ATGTTTGAGTAAATAATTAG+TGG - chr5_4:63147516-63147535 Msa0863370:intron 20.0%
!! AGAATTTGATTAGAAAGAAT+TGG - chr5_4:63147941-63147960 Msa0863370:intron 20.0%
!! AATATCAAAACTTGAATAGT+GGG + chr5_4:63148013-63148032 None:intergenic 20.0%
! TTGAAGAAAGTAATGTTCAA+AGG - chr5_4:63141202-63141221 Msa0863370:intron 25.0%
! TGAAGAAAGTAATGTTCAAA+GGG - chr5_4:63141203-63141222 Msa0863370:intron 25.0%
! AAGGTATAAGAAGCAAAAAA+AGG + chr5_4:63141271-63141290 None:intergenic 25.0%
!!! CATTTTCCATTTTTACTTTC+TGG - chr5_4:63141291-63141310 Msa0863370:three_prime_UTR 25.0%
! TGCTCAAATTCAATCAAAAT+AGG - chr5_4:63141373-63141392 Msa0863370:three_prime_UTR 25.0%
! GCTCAAATTCAATCAAAATA+GGG - chr5_4:63141374-63141393 Msa0863370:three_prime_UTR 25.0%
! CTTGGAATTTCAATTTATCT+AGG - chr5_4:63141473-63141492 Msa0863370:three_prime_UTR 25.0%
! TTTCATAAGTTCTTCTAGAT+AGG - chr5_4:63141704-63141723 Msa0863370:intron 25.0%
! AAAAATAAGCCAATCCAAAT+GGG + chr5_4:63141781-63141800 None:intergenic 25.0%
! AAAAAATAAGCCAATCCAAA+TGG + chr5_4:63141782-63141801 None:intergenic 25.0%
! CATTATTCATAAGCTTATCA+AGG - chr5_4:63141830-63141849 Msa0863370:intron 25.0%
!!! ATATAAGAACTACTTTTGCT+TGG - chr5_4:63142217-63142236 Msa0863370:CDS 25.0%
! TCTGAAAATAAGCAATTTCA+TGG - chr5_4:63142348-63142367 Msa0863370:CDS 25.0%
! ATTTAAAAGAGAAAGGGATA+AGG - chr5_4:63142506-63142525 Msa0863370:intron 25.0%
! TTTAAAAGAGAAAGGGATAA+GGG - chr5_4:63142507-63142526 Msa0863370:intron 25.0%
! TAAGAATTGAACCTTAACAT+GGG - chr5_4:63142532-63142551 Msa0863370:CDS 25.0%
! CCGAAAAAAATTCAGTTAAA+AGG - chr5_4:63142587-63142606 Msa0863370:intron 25.0%
! CAAGTTAATAGTATCATATG+GGG - chr5_4:63142736-63142755 Msa0863370:intron 25.0%
!!! CTTGTGATTTTTTATGTTAC+TGG - chr5_4:63142812-63142831 Msa0863370:intron 25.0%
! TTATTATGTGTAGATATGTG+GGG - chr5_4:63142852-63142871 Msa0863370:intron 25.0%
! AACAAATTATTTGTTCCTTG+GGG - chr5_4:63142936-63142955 Msa0863370:intron 25.0%
!! GATAATCTTTTATTCTTCTC+GGG - chr5_4:63143020-63143039 Msa0863370:intron 25.0%
!!! ATATTCTAGTTTCTTTTGTG+TGG - chr5_4:63143103-63143122 Msa0863370:CDS 25.0%
!! TTTTTGGATTTTGGATCTTT+TGG - chr5_4:63143257-63143276 Msa0863370:intron 25.0%
!!! TGAACACAATTTGCTATTAT+TGG - chr5_4:63143410-63143429 Msa0863370:intron 25.0%
!! TCAAATTTTGTTCTTTTGTC+TGG - chr5_4:63143565-63143584 Msa0863370:intron 25.0%
! AAATAACTACTGAGTGAAAA+AGG + chr5_4:63143630-63143649 None:intergenic 25.0%
! AAATTAACTTATGGAATAGG+GGG + chr5_4:63143808-63143827 None:intergenic 25.0%
!! TGTTTTTCCTTGATGTTTTT+CGG - chr5_4:63144574-63144593 Msa0863370:intron 25.0%
!!! ATTGACAGCTCTAATTTTTT+AGG - chr5_4:63144643-63144662 Msa0863370:intron 25.0%
!!! TTGACAGCTCTAATTTTTTA+GGG - chr5_4:63144644-63144663 Msa0863370:intron 25.0%
! CTAATTATTGACATACAATC+AGG - chr5_4:63145454-63145473 Msa0863370:intron 25.0%
! GAATAATGAATGAAAGTGAA+AGG - chr5_4:63145560-63145579 Msa0863370:intron 25.0%
! AATATGGTTCAGTAAATGTT+TGG - chr5_4:63145686-63145705 Msa0863370:intron 25.0%
! CTGACATATTTGATTACTTA+AGG - chr5_4:63145719-63145738 Msa0863370:intron 25.0%
!! AATTGATTTAATCTTGCACA+TGG - chr5_4:63145959-63145978 Msa0863370:intron 25.0%
!! ATTGATTTAATCTTGCACAT+GGG - chr5_4:63145960-63145979 Msa0863370:intron 25.0%
!!! TCAAGCATTACTTTTTTGAA+GGG + chr5_4:63145997-63146016 None:intergenic 25.0%
!!! ATCAAGCATTACTTTTTTGA+AGG + chr5_4:63145998-63146017 None:intergenic 25.0%
!!! CATTATCCTTTCTATTTTAG+AGG - chr5_4:63146213-63146232 Msa0863370:intron 25.0%
!!! TTGTGTATTTTAAGAGGAAA+AGG - chr5_4:63146302-63146321 Msa0863370:CDS 25.0%
!!! TGTGTATTTTAAGAGGAAAA+GGG - chr5_4:63146303-63146322 Msa0863370:CDS 25.0%
! CTTCAATATATCATTTGATG+AGG + chr5_4:63146374-63146393 None:intergenic 25.0%
! GAGTATAGAAATAACCAAAA+AGG - chr5_4:63146524-63146543 Msa0863370:intron 25.0%
!! TAAAACCCTATTTTCCTTTT+TGG + chr5_4:63146541-63146560 None:intergenic 25.0%
!!! AAAGGAAAATAGGGTTTTAA+TGG - chr5_4:63146542-63146561 Msa0863370:intron 25.0%
! AACTTCAGACACATAAATTA+GGG + chr5_4:63146780-63146799 None:intergenic 25.0%
! AAACTTCAGACACATAAATT+AGG + chr5_4:63146781-63146800 None:intergenic 25.0%
!!! TGAAGTTTTAGATCGTATAT+AGG - chr5_4:63146793-63146812 Msa0863370:intron 25.0%
! GCATATATAGTCAATGTTAT+TGG + chr5_4:63147011-63147030 None:intergenic 25.0%
! CTGTACATATATAAGCTATA+TGG - chr5_4:63147329-63147348 Msa0863370:intron 25.0%
!! AATCAATGGATTTGACATTA+AGG + chr5_4:63147395-63147414 None:intergenic 25.0%
! TTTATGTTCTTTGCTACATT+AGG - chr5_4:63147539-63147558 Msa0863370:intron 25.0%
! TTATGTTCTTTGCTACATTA+GGG - chr5_4:63147540-63147559 Msa0863370:intron 25.0%
! GATATAGAAACAAAGAAATC+TGG + chr5_4:63147685-63147704 None:intergenic 25.0%
!! AGTTTGTGATTTGCAATATA+TGG - chr5_4:63147842-63147861 Msa0863370:intron 25.0%
! GAATATCAAAACTTGAATAG+TGG + chr5_4:63148014-63148033 None:intergenic 25.0%
AATTGAAGAAGAAGAAGAAG+CGG - chr5_4:63141038-63141057 Msa0863370:three_prime_UTR 30.0%
GAACATTACTTTCTTCAACA+AGG + chr5_4:63141200-63141219 None:intergenic 30.0%
GTATAAGAAGCAAAAAAAGG+AGG + chr5_4:63141268-63141287 None:intergenic 30.0%
ATTCAATCAAAATAGGGTAG+TGG - chr5_4:63141380-63141399 Msa0863370:three_prime_UTR 30.0%
! GAATAACAACTAGTTTCACT+TGG - chr5_4:63141455-63141474 Msa0863370:three_prime_UTR 30.0%
CTGACAAGAACTTATGAAAA+CGG - chr5_4:63141643-63141662 Msa0863370:intron 30.0%
!! GGGCTCTAAATTAAGTTATA+TGG + chr5_4:63141761-63141780 None:intergenic 30.0%
! AACTTAATTTAGAGCCCATT+TGG - chr5_4:63141764-63141783 Msa0863370:intron 30.0%
! ATTAAGTTGTTTAGCCAAAC+AGG - chr5_4:63141969-63141988 Msa0863370:intron 30.0%
! TTAAGTTGTTTAGCCAAACA+GGG - chr5_4:63141970-63141989 Msa0863370:intron 30.0%
! TATTGATTGGATTCACGTAT+TGG - chr5_4:63142065-63142084 Msa0863370:intron 30.0%
ATTGATTGGATTCACGTATT+GGG - chr5_4:63142066-63142085 Msa0863370:intron 30.0%
! TTATTACGAAAGAACTTGCT+CGG - chr5_4:63142096-63142115 Msa0863370:intron 30.0%
AATAAGCAATTTCATGGTGA+TGG - chr5_4:63142354-63142373 Msa0863370:CDS 30.0%
ATAAGCAATTTCATGGTGAT+GGG - chr5_4:63142355-63142374 Msa0863370:CDS 30.0%
TAAACCTGAAAGCAAAAACA+GGG + chr5_4:63142464-63142483 None:intergenic 30.0%
TTAAAAGAGAAAGGGATAAG+GGG - chr5_4:63142508-63142527 Msa0863370:intron 30.0%
CTAAGAATTGAACCTTAACA+TGG - chr5_4:63142531-63142550 Msa0863370:CDS 30.0%
AGCGATAAAACACATAAAGT+GGG - chr5_4:63142557-63142576 Msa0863370:CDS 30.0%
!!! ATGAAGGAGCTTTTTAAAGT+TGG - chr5_4:63142898-63142917 Msa0863370:intron 30.0%
!!! CGTTTGGTTTTGTATGTTTT+TGG - chr5_4:63143241-63143260 Msa0863370:intron 30.0%
! TTCTTATGATTTCTAGGTTG+TGG - chr5_4:63143333-63143352 Msa0863370:intron 30.0%
! TCTTATGATTTCTAGGTTGT+GGG - chr5_4:63143334-63143353 Msa0863370:intron 30.0%
!!! GTGAACTCATTGCTTTTTTT+TGG - chr5_4:63143387-63143406 Msa0863370:intron 30.0%
TAAAATTCCACGTCTTTATG+TGG - chr5_4:63143435-63143454 Msa0863370:intron 30.0%
AAAATTCCACGTCTTTATGT+GGG - chr5_4:63143436-63143455 Msa0863370:intron 30.0%
CTATTAGTAATCCAGTATTG+TGG - chr5_4:63143511-63143530 Msa0863370:intron 30.0%
!!! ATCCAGTATTGTGGTTTTAT+TGG - chr5_4:63143520-63143539 Msa0863370:intron 30.0%
ATGGAATGTTATGCATATGT+TGG - chr5_4:63143604-63143623 Msa0863370:intron 30.0%
!!! TCGTTGGTTTTTATATGACA+CGG - chr5_4:63144196-63144215 Msa0863370:intron 30.0%
!!! TTTTTTAAGTATTGGGGCTT+TGG - chr5_4:63144495-63144514 Msa0863370:intron 30.0%
!!! TTTTTAAGTATTGGGGCTTT+GGG - chr5_4:63144496-63144515 Msa0863370:intron 30.0%
TAATAAGCCCCCTAAATATA+AGG + chr5_4:63144527-63144546 None:intergenic 30.0%
ATTAGAGCTGTCAATTTGAT+GGG + chr5_4:63144638-63144657 None:intergenic 30.0%
AATTAGAGCTGTCAATTTGA+TGG + chr5_4:63144639-63144658 None:intergenic 30.0%
TTGTACTAAATTGCGTATCA+GGG + chr5_4:63144790-63144809 None:intergenic 30.0%
GGGAGATTAAGAAAAACTAT+AGG - chr5_4:63144913-63144932 Msa0863370:intron 30.0%
GGGAGATTAAGAAAAACTAT+AGG - chr5_4:63144913-63144932 Msa0863370:intron 30.0%
TGCTTTATCTGTAATGCAAA+TGG - chr5_4:63145123-63145142 Msa0863370:intron 30.0%
!!! TATTTTTTAGGAAGAATGCC+TGG - chr5_4:63145190-63145209 Msa0863370:intron 30.0%
!! TACATGTGTTTTTGTGTAGA+GGG - chr5_4:63145775-63145794 Msa0863370:intron 30.0%
TGATTGTTTCCTTGTAATCA+TGG - chr5_4:63145818-63145837 Msa0863370:intron 30.0%
GATTGTTTCCTTGTAATCAT+GGG - chr5_4:63145819-63145838 Msa0863370:intron 30.0%
ATTGTTTCCTTGTAATCATG+GGG - chr5_4:63145820-63145839 Msa0863370:intron 30.0%
!!! CAAGCATTACTTTTTTGAAG+GGG + chr5_4:63145996-63146015 None:intergenic 30.0%
ATAACAAAGAAAATCACACG+TGG + chr5_4:63146126-63146145 None:intergenic 30.0%
ACTGTCAAATTCATGATTGA+AGG - chr5_4:63146153-63146172 Msa0863370:intron 30.0%
CTGTCAAATTCATGATTGAA+GGG - chr5_4:63146154-63146173 Msa0863370:intron 30.0%
!!! TTTTCAAGTAACAGTGTCAA+TGG + chr5_4:63146186-63146205 None:intergenic 30.0%
!! TCCTTTCTATTTTAGAGGAA+CGG - chr5_4:63146218-63146237 Msa0863370:intron 30.0%
CTCTTAAAATACACAAAGAC+AGG + chr5_4:63146298-63146317 None:intergenic 30.0%
!! CTGTCTTTGTGTATTTTAAG+AGG - chr5_4:63146296-63146315 Msa0863370:CDS 30.0%
TTTCTATACTCAAGAAATGC+TGG + chr5_4:63146515-63146534 None:intergenic 30.0%
! AACAAGATTTTCAGTGTTCA+TGG - chr5_4:63146707-63146726 Msa0863370:intron 30.0%
TTCTATCAATAGTTCGTATC+TGG + chr5_4:63146850-63146869 None:intergenic 30.0%
AACTATTGATAGAAAGCAAG+AGG - chr5_4:63146856-63146875 Msa0863370:intron 30.0%
TATAGTCAATGTTATTGGTG+TGG + chr5_4:63147006-63147025 None:intergenic 30.0%
!! TGGTAATGGAAGGATATAAA+TGG - chr5_4:63147044-63147063 Msa0863370:intron 30.0%
ATAATCAGATAGTTACTGTC+TGG - chr5_4:63147074-63147093 Msa0863370:intron 30.0%
ATGTACCTGTAGCAATAATT+TGG + chr5_4:63147106-63147125 None:intergenic 30.0%
CTATTACTCTATTAGTGTTC+TGG - chr5_4:63147147-63147166 Msa0863370:intron 30.0%
TAATTAATTTCCTCCTTGGT+GGG + chr5_4:63147577-63147596 None:intergenic 30.0%
TTATTGAAACAGGAATCAAG+AGG - chr5_4:63147618-63147637 Msa0863370:intron 30.0%
TGAATACACGAATTGACAAA+CGG - chr5_4:63147705-63147724 Msa0863370:intron 30.0%
TTGTGCATCGTTATTATTGT+AGG - chr5_4:63147806-63147825 Msa0863370:intron 30.0%
AGAAAGAATTGGATTTGATC+AGG - chr5_4:63147952-63147971 Msa0863370:intron 30.0%
GAAAGAATTGGATTTGATCA+GGG - chr5_4:63147953-63147972 Msa0863370:intron 30.0%
CAGAAAGTAATACAAACACA+TGG - chr5_4:63148260-63148279 Msa0863370:five_prime_UTR 30.0%
!! ACTTCTTGGTTTTTGTGTGT+CGG + chr5_4:63140967-63140986 None:intergenic 35.0%
TTGACTTCAGATTCCTTCAA+TGG + chr5_4:63141150-63141169 None:intergenic 35.0%
TTCTTCAACAAGGATTTCGA+TGG + chr5_4:63141190-63141209 None:intergenic 35.0%
GTGGATAGTAAAGTAGCTTA+CGG + chr5_4:63141244-63141263 None:intergenic 35.0%
CATGACCCAGAAAGTAAAAA+TGG + chr5_4:63141300-63141319 None:intergenic 35.0%
AAACAGTGAAAACCCAGTAA+GGG + chr5_4:63141330-63141349 None:intergenic 35.0%
AAAACAGTGAAAACCCAGTA+AGG + chr5_4:63141331-63141350 None:intergenic 35.0%
!!! TCACTTTTTCGAGATTTGGT+AGG - chr5_4:63141552-63141571 Msa0863370:three_prime_UTR 35.0%
!! TTTCGAGATTTGGTAGGTTT+TGG - chr5_4:63141558-63141577 Msa0863370:three_prime_UTR 35.0%
!! TTCGAGATTTGGTAGGTTTT+GGG - chr5_4:63141559-63141578 Msa0863370:three_prime_UTR 35.0%
ACGTATTTGAGCTTATATGC+TGG - chr5_4:63141600-63141619 Msa0863370:exon 35.0%
!! GCATTTCATAAGCTGTTTTC+AGG - chr5_4:63141673-63141692 Msa0863370:intron 35.0%
! AATTTAGAGCCCATTTGGAT+TGG - chr5_4:63141769-63141788 Msa0863370:intron 35.0%
AAAAACACAAAAGCCCTGTT+TGG + chr5_4:63141986-63142005 None:intergenic 35.0%
! TGTTAGGGTCACTTTATCAA+AGG - chr5_4:63142305-63142324 Msa0863370:CDS 35.0%
! GTTAGGGTCACTTTATCAAA+GGG - chr5_4:63142306-63142325 Msa0863370:CDS 35.0%
! TTAGGGTCACTTTATCAAAG+GGG - chr5_4:63142307-63142326 Msa0863370:CDS 35.0%
CTAAACCTGAAAGCAAAAAC+AGG + chr5_4:63142465-63142484 None:intergenic 35.0%
! CACTTTATGTGTTTTATCGC+TGG + chr5_4:63142558-63142577 None:intergenic 35.0%
CAGCGATAAAACACATAAAG+TGG - chr5_4:63142556-63142575 Msa0863370:CDS 35.0%
GCGATAAAACACATAAAGTG+GGG - chr5_4:63142558-63142577 Msa0863370:CDS 35.0%
TAAAACACATAAAGTGGGGA+TGG - chr5_4:63142562-63142581 Msa0863370:CDS 35.0%
AAAACACATAAAGTGGGGAT+GGG - chr5_4:63142563-63142582 Msa0863370:CDS 35.0%
CTTACGGGGATCAAATAAAT+GGG - chr5_4:63142628-63142647 Msa0863370:intron 35.0%
TTACGGGGATCAAATAAATG+GGG - chr5_4:63142629-63142648 Msa0863370:intron 35.0%
ATAAATGGGGCTTTGCAATT+TGG - chr5_4:63142642-63142661 Msa0863370:intron 35.0%
TAAATGGGGCTTTGCAATTT+GGG - chr5_4:63142643-63142662 Msa0863370:intron 35.0%
TAGATATGTGGGGATATTCA+CGG - chr5_4:63142862-63142881 Msa0863370:intron 35.0%
!!! AAGGAGCTTTTTAAAGTTGG+TGG - chr5_4:63142901-63142920 Msa0863370:intron 35.0%
!! TTGTGTGGTCTTGTATGATT+TGG - chr5_4:63143118-63143137 Msa0863370:CDS 35.0%
!! TGTGTGGTCTTGTATGATTT+GGG - chr5_4:63143119-63143138 Msa0863370:CDS 35.0%
AATACGATCTTATGGTTTCC+AGG - chr5_4:63143180-63143199 Msa0863370:intron 35.0%
! TTGTAGTTTTTGTGTGCGTT+TGG - chr5_4:63143225-63143244 Msa0863370:intron 35.0%
GAAACTTGAAAATCTGTTGG+AGG - chr5_4:63143473-63143492 Msa0863370:intron 35.0%
CACCAATAAAACCACAATAC+TGG + chr5_4:63143525-63143544 None:intergenic 35.0%
! TTGTTCTTTTGTCTGGTTGT+TGG - chr5_4:63143572-63143591 Msa0863370:intron 35.0%
AGTAAAATGCTGTCTTCTGT+GGG + chr5_4:63143656-63143675 None:intergenic 35.0%
AAGTAAAATGCTGTCTTCTG+TGG + chr5_4:63143657-63143676 None:intergenic 35.0%
AGAACAGAAACCTACAAAGT+GGG + chr5_4:63143691-63143710 None:intergenic 35.0%
CTTTAGTAGGGCTTAATTGT+TGG + chr5_4:63143770-63143789 None:intergenic 35.0%
TGGGGCCAAAAATTAACTTA+TGG + chr5_4:63143817-63143836 None:intergenic 35.0%
AAATCATGACATATTGGGCT+GGG + chr5_4:63143836-63143855 None:intergenic 35.0%
AAAATCATGACATATTGGGC+TGG + chr5_4:63143837-63143856 None:intergenic 35.0%
AAGGTTTCTTCCTTCAAACA+AGG + chr5_4:63143891-63143910 None:intergenic 35.0%
CTTCATACCTATGAGGTTTA+CGG + chr5_4:63144005-63144024 None:intergenic 35.0%
CGTGATTGTATTGTCTTGTA+TGG + chr5_4:63144072-63144091 None:intergenic 35.0%
ACGTTTCTAAATAGATCCTC+CGG - chr5_4:63144089-63144108 Msa0863370:intron 35.0%
!!! CGTCAAAGTTTTTGAGATTC+CGG - chr5_4:63144219-63144238 Msa0863370:intron 35.0%
!!! TTTTAAGTATTGGGGCTTTG+GGG - chr5_4:63144497-63144516 Msa0863370:intron 35.0%
TTTAGGGGGCTTATTACATT+TGG - chr5_4:63144531-63144550 Msa0863370:intron 35.0%
TTAGGGGGCTTATTACATTT+GGG - chr5_4:63144532-63144551 Msa0863370:intron 35.0%
! AAACAAGACCCTTTTCACAT+AGG + chr5_4:63144559-63144578 None:intergenic 35.0%
TTAGAGCTGTCAATTTGATG+GGG + chr5_4:63144637-63144656 None:intergenic 35.0%
GAGTCCTTTGTCTTTAATGA+GGG - chr5_4:63144666-63144685 Msa0863370:intron 35.0%
AGTCCTTTGTCTTTAATGAG+GGG - chr5_4:63144667-63144686 Msa0863370:intron 35.0%
TGACAACACTGTCAAACTAT+TGG + chr5_4:63144712-63144731 None:intergenic 35.0%
TTGACAGTGTTGTCAAATAG+AGG - chr5_4:63144717-63144736 Msa0863370:intron 35.0%
CTTGTACTAAATTGCGTATC+AGG + chr5_4:63144791-63144810 None:intergenic 35.0%
CTGATACGCAATTTAGTACA+AGG - chr5_4:63144789-63144808 Msa0863370:intron 35.0%
!!! CAAATGGACTGTTCACTTTT+GGG - chr5_4:63145139-63145158 Msa0863370:intron 35.0%
AGCACAGATAATGACTCAAA+AGG + chr5_4:63145409-63145428 None:intergenic 35.0%
AGATCGGATAACGCTTATTA+GGG - chr5_4:63145487-63145506 Msa0863370:intron 35.0%
TTCAATATCCATCACTTGAC+AGG - chr5_4:63145633-63145652 Msa0863370:intron 35.0%
TTACTGAACCATATTTCCGA+AGG + chr5_4:63145681-63145700 None:intergenic 35.0%
!! GTACATGTGTTTTTGTGTAG+AGG - chr5_4:63145774-63145793 Msa0863370:intron 35.0%
GGTATGAAAAATGCAGTTTG+TGG + chr5_4:63146052-63146071 None:intergenic 35.0%
!!! TCTTTTTTCCGTCTGTTTTG+TGG - chr5_4:63146091-63146110 Msa0863370:intron 35.0%
!!! CTTTTTTCCGTCTGTTTTGT+GGG - chr5_4:63146092-63146111 Msa0863370:intron 35.0%
!! CCTTTCTATTTTAGAGGAAC+GGG - chr5_4:63146219-63146238 Msa0863370:intron 35.0%
!! CTTTCTATTTTAGAGGAACG+GGG - chr5_4:63146220-63146239 Msa0863370:intron 35.0%
!! TTTTAAGAGGAAAAGGGTTG+AGG - chr5_4:63146309-63146328 Msa0863370:CDS 35.0%
CTGTCAAAATATTTGGCCAA+TGG + chr5_4:63146351-63146370 None:intergenic 35.0%
GATGAGGCTGTCAAAATATT+TGG + chr5_4:63146358-63146377 None:intergenic 35.0%
! AAGATTTTCAGTGTTCATGG+TGG - chr5_4:63146710-63146729 Msa0863370:intron 35.0%
!! TTCTCCTGCTATTTCAACAT+TGG - chr5_4:63146736-63146755 Msa0863370:intron 35.0%
TGATCCAATGTTGAAATAGC+AGG + chr5_4:63146743-63146762 None:intergenic 35.0%
!! TGCTATTTCAACATTGGATC+AGG - chr5_4:63146742-63146761 Msa0863370:intron 35.0%
TTTCGTCTTTGTTACAGATG+TGG - chr5_4:63147187-63147206 Msa0863370:intron 35.0%
! GCTTGTATTGCTTCTTTTTG+AGG + chr5_4:63147365-63147384 None:intergenic 35.0%
TTCTTTACCACACGAATCAA+TGG + chr5_4:63147409-63147428 None:intergenic 35.0%
TCCTACTGAATCTATGTATC+AGG - chr5_4:63147464-63147483 Msa0863370:intron 35.0%
CCTACTGAATCTATGTATCA+GGG - chr5_4:63147465-63147484 Msa0863370:intron 35.0%
AATTAATTTCCTCCTTGGTG+GGG + chr5_4:63147576-63147595 None:intergenic 35.0%
CTAATTAATTTCCTCCTTGG+TGG + chr5_4:63147578-63147597 None:intergenic 35.0%
CAGCTAATTAATTTCCTCCT+TGG + chr5_4:63147581-63147600 None:intergenic 35.0%
CTGGTTTATAAGAAGTAGTC+TGG + chr5_4:63147666-63147685 None:intergenic 35.0%
CACATGTTATGAATGAACGA+AGG + chr5_4:63147874-63147893 None:intergenic 35.0%
CGTTCATTCATAACATGTGA+TGG - chr5_4:63147875-63147894 Msa0863370:intron 35.0%
TGGATTTGATCAGGGAATAT+TGG - chr5_4:63147961-63147980 Msa0863370:intron 35.0%
GGATTTGATCAGGGAATATT+GGG - chr5_4:63147962-63147981 Msa0863370:intron 35.0%
! GTTTTTCTCCACAGGTTATA+TGG + chr5_4:63147991-63148010 None:intergenic 35.0%
ACAAATGAACCTCTGAATAC+AGG + chr5_4:63148237-63148256 None:intergenic 35.0%
TAAAGTAGCTTACGGTGACA+GGG + chr5_4:63141236-63141255 None:intergenic 40.0%
AGAAGCAAAAAAAGGAGGAG+TGG + chr5_4:63141263-63141282 None:intergenic 40.0%
! TCATGATCGATTCCCTTACT+GGG - chr5_4:63141315-63141334 Msa0863370:three_prime_UTR 40.0%
!!! AGGGTCACTTTTTCGAGATT+TGG - chr5_4:63141548-63141567 Msa0863370:three_prime_UTR 40.0%
CTTTATCAAAGGGGTCTGTT+AGG - chr5_4:63142316-63142335 Msa0863370:CDS 40.0%
!!! GTTTCCCTGTTTTTGCTTTC+AGG - chr5_4:63142457-63142476 Msa0863370:intron 40.0%
TAAAAGGGGGCCAAGAATTA+TGG - chr5_4:63142603-63142622 Msa0863370:intron 40.0%
AAAAGGGGGCCAAGAATTAT+GGG - chr5_4:63142604-63142623 Msa0863370:intron 40.0%
GCTTACGGGGATCAAATAAA+TGG - chr5_4:63142627-63142646 Msa0863370:intron 40.0%
AAATGGGGCTTTGCAATTTG+GGG - chr5_4:63142644-63142663 Msa0863370:intron 40.0%
!! CGGACAGTTTTATGACATGA+AGG - chr5_4:63142882-63142901 Msa0863370:intron 40.0%
CTCTATCAACAAAATCCCCA+AGG + chr5_4:63142954-63142973 None:intergenic 40.0%
!! CTTGGGGATTTTGTTGATAG+AGG - chr5_4:63142952-63142971 Msa0863370:intron 40.0%
! CTTCTCGGGAAAGATTTTTG+TGG - chr5_4:63143034-63143053 Msa0863370:intron 40.0%
! TGATTTCTAGGTTGTGGGAT+TGG - chr5_4:63143339-63143358 Msa0863370:intron 40.0%
GGCGAAACTTGAAAATCTGT+TGG - chr5_4:63143470-63143489 Msa0863370:intron 40.0%
ACTTGAAAATCTGTTGGAGG+AGG - chr5_4:63143476-63143495 Msa0863370:intron 40.0%
CAGAACAGAAACCTACAAAG+TGG + chr5_4:63143692-63143711 None:intergenic 40.0%
! TTGGTGGGGCTTTTGTATTT+GGG + chr5_4:63143751-63143770 None:intergenic 40.0%
AGTAGGGCTTAATTGTTGGT+GGG + chr5_4:63143766-63143785 None:intergenic 40.0%
TAGTAGGGCTTAATTGTTGG+TGG + chr5_4:63143767-63143786 None:intergenic 40.0%
! GAAAGTTTGGGGCTTTAGTA+GGG + chr5_4:63143782-63143801 None:intergenic 40.0%
! AGAAAGTTTGGGGCTTTAGT+AGG + chr5_4:63143783-63143802 None:intergenic 40.0%
TACTAAAGCCCCAAACTTTC+TGG - chr5_4:63143782-63143801 Msa0863370:CDS 40.0%
AATCATGACATATTGGGCTG+GGG + chr5_4:63143835-63143854 None:intergenic 40.0%
!!! TTTTTTGTTGGGCCTAGTTG+AGG - chr5_4:63143853-63143872 Msa0863370:intron 40.0%
! TTTTTGTTGGGCCTAGTTGA+GGG - chr5_4:63143854-63143873 Msa0863370:intron 40.0%
AGTGAGAAGGAGTAACAAGA+AGG + chr5_4:63143910-63143929 None:intergenic 40.0%
CGTAAACCTCATAGGTATGA+AGG - chr5_4:63144003-63144022 Msa0863370:intron 40.0%
TCTTGTATGGCCTTTACTGA+AGG + chr5_4:63144059-63144078 None:intergenic 40.0%
AGCTTCTGCTTCTGAATCTA+CGG + chr5_4:63144144-63144163 None:intergenic 40.0%
!!! CAAAGTTTTTGAGATTCCGG+CGG - chr5_4:63144222-63144241 Msa0863370:intron 40.0%
TTGGGGCCAACCTTATATTT+AGG - chr5_4:63144514-63144533 Msa0863370:intron 40.0%
TGGGGCCAACCTTATATTTA+GGG - chr5_4:63144515-63144534 Msa0863370:intron 40.0%
AAGCCCCCTAAATATAAGGT+TGG + chr5_4:63144523-63144542 None:intergenic 40.0%
TAGGGGGCTTATTACATTTG+GGG - chr5_4:63144533-63144552 Msa0863370:intron 40.0%
! ATTTGGGGCCTATGTGAAAA+GGG - chr5_4:63144548-63144567 Msa0863370:intron 40.0%
GGAGTCCTTTGTCTTTAATG+AGG - chr5_4:63144665-63144684 Msa0863370:intron 40.0%
TCACCCCTCATTAAAGACAA+AGG + chr5_4:63144673-63144692 None:intergenic 40.0%
ATTGCAGATGGTCGAAATAG+AGG + chr5_4:63144868-63144887 None:intergenic 40.0%
TCAGTGTTCTCAATTGCAGA+TGG + chr5_4:63144880-63144899 None:intergenic 40.0%
GCAATTGAGAACACTGAAGT+TGG - chr5_4:63144883-63144902 Msa0863370:intron 40.0%
ATTGAGAACACTGAAGTTGG+AGG - chr5_4:63144886-63144905 Msa0863370:intron 40.0%
ATTTCTCTCCAAGTAGTCTG+TGG + chr5_4:63145015-63145034 None:intergenic 40.0%
GAGAAAGTTGCGTTGTTGAT+TGG - chr5_4:63145059-63145078 Msa0863370:intron 40.0%
! CAATCAAGCATTTTCTCACG+TGG + chr5_4:63145093-63145112 None:intergenic 40.0%
!!! GCAAATGGACTGTTCACTTT+TGG - chr5_4:63145138-63145157 Msa0863370:intron 40.0%
AAGCAGAAAGAAGAAGTTCC+AGG + chr5_4:63145211-63145230 None:intergenic 40.0%
CAACAACTCTTAGAACCTAG+TGG + chr5_4:63145373-63145392 None:intergenic 40.0%
!! CACTAGGTTCTAAGAGTTGT+TGG - chr5_4:63145371-63145390 Msa0863370:intron 40.0%
ATCAGGTGAGATATCCAGAT+CGG - chr5_4:63145471-63145490 Msa0863370:intron 40.0%
CTAATAAGCGTTATCCGATC+TGG + chr5_4:63145488-63145507 None:intergenic 40.0%
CAGATCGGATAACGCTTATT+AGG - chr5_4:63145486-63145505 Msa0863370:intron 40.0%
GATCGGATAACGCTTATTAG+GGG - chr5_4:63145488-63145507 Msa0863370:intron 40.0%
GGTTTGTCTATTAGCTGAAG+TGG - chr5_4:63145538-63145557 Msa0863370:intron 40.0%
AGTGAAAGGGAAAAAGTCAC+TGG - chr5_4:63145574-63145593 Msa0863370:intron 40.0%
TCCATCACTTGACAGGTATA+CGG - chr5_4:63145640-63145659 Msa0863370:intron 40.0%
TTTGTGTAGAGGGTGAATCT+TGG - chr5_4:63145785-63145804 Msa0863370:intron 40.0%
GATTTGACCCCATGATTACA+AGG + chr5_4:63145830-63145849 None:intergenic 40.0%
! CGAAAGGAAAGACTGTTTCT+AGG + chr5_4:63145852-63145871 None:intergenic 40.0%
AGAAACAGTCTTTCCTTTCG+CGG - chr5_4:63145852-63145871 Msa0863370:intron 40.0%
!! CCCGTTCCTCTAAAATAGAA+AGG + chr5_4:63146222-63146241 None:intergenic 40.0%
!! ATTTTAGAGGAACGGGGTTT+AGG - chr5_4:63146226-63146245 Msa0863370:intron 40.0%
TGGGTGATTTCAAGAACCAT+TGG - chr5_4:63146332-63146351 Msa0863370:CDS 40.0%
!! ACCGCACTCTTTTAGAGATT+GGG - chr5_4:63146406-63146425 Msa0863370:intron 40.0%
ATGCAGCCTCATTCGATAAA+CGG + chr5_4:63146435-63146454 None:intergenic 40.0%
TTTATCGAATGAGGCTGCAT+GGG - chr5_4:63146435-63146454 Msa0863370:intron 40.0%
TATCTTCAGGATCTGACCAT+AGG + chr5_4:63146910-63146929 None:intergenic 40.0%
GTCAGATCCTGAAGATATTG+TGG - chr5_4:63146913-63146932 Msa0863370:intron 40.0%
GATCCTGAAGATATTGTGGA+TGG - chr5_4:63146917-63146936 Msa0863370:intron 40.0%
TGAAGATATTGTGGATGGCT+GGG - chr5_4:63146922-63146941 Msa0863370:intron 40.0%
CAGCTCCAAATTATTGCTAC+AGG - chr5_4:63147098-63147117 Msa0863370:intron 40.0%
!! GTCAAATCCATTGATTCGTG+TGG - chr5_4:63147399-63147418 Msa0863370:intron 40.0%
CCCTGATACATAGATTCAGT+AGG + chr5_4:63147468-63147487 None:intergenic 40.0%
TATAAGAAGTAGTCTGGTGC+TGG + chr5_4:63147660-63147679 None:intergenic 40.0%
!! TCATAACATGTGATGGACAG+AGG - chr5_4:63147882-63147901 Msa0863370:intron 40.0%
!! CATAACATGTGATGGACAGA+GGG - chr5_4:63147883-63147902 Msa0863370:intron 40.0%
GGACAGAGGGTTTATTTAGA+AGG - chr5_4:63147896-63147915 Msa0863370:intron 40.0%
!!! AATAGTGGGTTTTTCTCCAC+AGG + chr5_4:63147999-63148018 None:intergenic 40.0%
CATGCATTTCCTGTATTCAG+AGG - chr5_4:63148225-63148244 Msa0863370:five_prime_UTR 40.0%
TTTGTGTGTCGGACCAACAA+GGG + chr5_4:63140956-63140975 None:intergenic 45.0%
! TTTTGTGTGTCGGACCAACA+AGG + chr5_4:63140957-63140976 None:intergenic 45.0%
GAAGAGATGCGAACCATTGA+AGG - chr5_4:63141134-63141153 Msa0863370:intron 45.0%
AAAGTAGCTTACGGTGACAG+GGG + chr5_4:63141235-63141254 None:intergenic 45.0%
GTAAAGTAGCTTACGGTGAC+AGG + chr5_4:63141237-63141256 None:intergenic 45.0%
! GTCATGATCGATTCCCTTAC+TGG - chr5_4:63141314-63141333 Msa0863370:three_prime_UTR 45.0%
!!! TGGTAGGTTTTGGGTCTGTT+TGG - chr5_4:63141568-63141587 Msa0863370:three_prime_UTR 45.0%
!!! GGTTTTGGGTCTGTTTGGAA+TGG - chr5_4:63141573-63141592 Msa0863370:three_prime_UTR 45.0%
! CGAAAGAACTTGCTCGGTAT+TGG - chr5_4:63142102-63142121 Msa0863370:intron 45.0%
CGTTTGTGACTGAGAAGAGT+GGG - chr5_4:63142435-63142454 Msa0863370:intron 45.0%
TTTATCGCTGGCCCATGTTA+AGG + chr5_4:63142546-63142565 None:intergenic 45.0%
AAAGGGGGCCAAGAATTATG+GGG - chr5_4:63142605-63142624 Msa0863370:intron 45.0%
GCCAAGAATTATGGGGCTTA+CGG - chr5_4:63142612-63142631 Msa0863370:intron 45.0%
CCAAGAATTATGGGGCTTAC+GGG - chr5_4:63142613-63142632 Msa0863370:intron 45.0%
CAAGAATTATGGGGCTTACG+GGG - chr5_4:63142614-63142633 Msa0863370:intron 45.0%
ATGCGAAGTGACAGTGTAGT+TGG - chr5_4:63142685-63142704 Msa0863370:intron 45.0%
TGCGAAGTGACAGTGTAGTT+GGG - chr5_4:63142686-63142705 Msa0863370:intron 45.0%
AGTGACAGTGTAGTTGGGAA+TGG - chr5_4:63142691-63142710 Msa0863370:intron 45.0%
GTGACAGTGTAGTTGGGAAT+GGG - chr5_4:63142692-63142711 Msa0863370:intron 45.0%
TGACAGTGTAGTTGGGAATG+GGG - chr5_4:63142693-63142712 Msa0863370:intron 45.0%
AAGTCAGTGTGGTTGGGAAT+GGG - chr5_4:63142776-63142795 Msa0863370:intron 45.0%
! CTCGGGAAAGATTTTTGTGG+CGG - chr5_4:63143037-63143056 Msa0863370:intron 45.0%
! GTATGATTTGGGTCTGCGTT+TGG - chr5_4:63143130-63143149 Msa0863370:CDS 45.0%
TGAACATGCTTCTAGCAACC+TGG + chr5_4:63143201-63143220 None:intergenic 45.0%
! TAGGTTGTGGGATTGGTGAT+AGG - chr5_4:63143346-63143365 Msa0863370:intron 45.0%
TTCCACGTCTTTATGTGGGA+TGG - chr5_4:63143440-63143459 Msa0863370:intron 45.0%
TTTATGTGGGATGGCATCAG+TGG - chr5_4:63143449-63143468 Msa0863370:intron 45.0%
TGTTGGAGGAGGCTTATTGA+TGG - chr5_4:63143487-63143506 Msa0863370:intron 45.0%
CAACTTTGCACCCACTTTGT+AGG - chr5_4:63143678-63143697 Msa0863370:intron 45.0%
! TGGTGGGGCTTTTGTATTTG+GGG + chr5_4:63143750-63143769 None:intergenic 45.0%
!! GTTGGTGGGGCTTTTGTATT+TGG + chr5_4:63143752-63143771 None:intergenic 45.0%
GTAGGGCTTAATTGTTGGTG+GGG + chr5_4:63143765-63143784 None:intergenic 45.0%
AATAGGGGGCCAGAAAGTTT+GGG + chr5_4:63143794-63143813 None:intergenic 45.0%
! TTTTGTTGGGCCTAGTTGAG+GGG - chr5_4:63143855-63143874 Msa0863370:intron 45.0%
ACTGTTGAGCAGTAGTGAGA+AGG + chr5_4:63143923-63143942 None:intergenic 45.0%
TATGAGGTTTACGGCGGTTA+TGG + chr5_4:63143996-63144015 None:intergenic 45.0%
ATAACCGCCGTAAACCTCAT+AGG - chr5_4:63143995-63144014 Msa0863370:intron 45.0%
CATACCTATGAGGTTTACGG+CGG + chr5_4:63144002-63144021 None:intergenic 45.0%
CGGAATCCTTCATACCTATG+AGG + chr5_4:63144012-63144031 None:intergenic 45.0%
TTTACTGAAGGTGGTGTGTG+TGG + chr5_4:63144047-63144066 None:intergenic 45.0%
ACACACACCACCTTCAGTAA+AGG - chr5_4:63144046-63144065 Msa0863370:intron 45.0%
TGTATGGCCTTTACTGAAGG+TGG + chr5_4:63144056-63144075 None:intergenic 45.0%
TTCTGCTTCTGAATCTACGG+TGG + chr5_4:63144141-63144160 None:intergenic 45.0%
AGAAGCAGAAGCTTCATCGA+CGG - chr5_4:63144151-63144170 Msa0863370:intron 45.0%
! AGGAAGGTGTGAGATTTCGT+TGG - chr5_4:63144180-63144199 Msa0863370:intron 45.0%
GGGGCCAACCTTATATTTAG+GGG - chr5_4:63144516-63144535 Msa0863370:intron 45.0%
GGGCCAACCTTATATTTAGG+GGG - chr5_4:63144517-63144536 Msa0863370:intron 45.0%
! CATTTGGGGCCTATGTGAAA+AGG - chr5_4:63144547-63144566 Msa0863370:intron 45.0%
AAGAGGGCCGAAAAACATCA+AGG + chr5_4:63144584-63144603 None:intergenic 45.0%
TCTCGTCTCTATACAGTCTG+TGG + chr5_4:63144944-63144963 None:intergenic 45.0%
AGAGACGAGAACACTGAAGT+TGG - chr5_4:63144954-63144973 Msa0863370:intron 45.0%
GAGAACACTGAAGTTGGAGA+TGG - chr5_4:63144960-63144979 Msa0863370:intron 45.0%
AACACTGAAGTTGGAGATGG+AGG - chr5_4:63144963-63144982 Msa0863370:intron 45.0%
ACACTGAAGTTGGAGATGGA+GGG - chr5_4:63144964-63144983 Msa0863370:intron 45.0%
AGGTCAAACCACAGACTACT+TGG - chr5_4:63145004-63145023 Msa0863370:intron 45.0%
! GCATTTTCTCACGTGGTACA+TGG + chr5_4:63145086-63145105 None:intergenic 45.0%
!! AAACGGGTTTTGTGACCACT+AGG - chr5_4:63145355-63145374 Msa0863370:intron 45.0%
GTGTGATCTGACGACTTTCA+TGG + chr5_4:63145517-63145536 None:intergenic 45.0%
TGAAAGTCGTCAGATCACAC+AGG - chr5_4:63145517-63145536 Msa0863370:intron 45.0%
ACCGTATACCTGTCAAGTGA+TGG + chr5_4:63145644-63145663 None:intergenic 45.0%
GTTTCTATGACGAGTGCCTT+CGG - chr5_4:63145662-63145681 Msa0863370:intron 45.0%
! TGACTAGTTGTTGGGGTCTT+GGG + chr5_4:63145902-63145921 None:intergenic 45.0%
! AAGGCTCTGACTAGTTGTTG+GGG + chr5_4:63145909-63145928 None:intergenic 45.0%
! CAAGGCTCTGACTAGTTGTT+GGG + chr5_4:63145910-63145929 None:intergenic 45.0%
! ACAAGGCTCTGACTAGTTGT+TGG + chr5_4:63145911-63145930 None:intergenic 45.0%
GAGAGATCTCAGCAACAGTA+TGG + chr5_4:63146073-63146092 None:intergenic 45.0%
ATACAGCATCCTTCGAGTCT+TGG + chr5_4:63146271-63146290 None:intergenic 45.0%
TAAGAGGAAAAGGGTTGAGG+TGG - chr5_4:63146312-63146331 Msa0863370:CDS 45.0%
AAGAGGAAAAGGGTTGAGGT+GGG - chr5_4:63146313-63146332 Msa0863370:CDS 45.0%
!! CACCGCACTCTTTTAGAGAT+TGG - chr5_4:63146405-63146424 Msa0863370:intron 45.0%
! GCCCAATCTCTAAAAGAGTG+CGG + chr5_4:63146410-63146429 None:intergenic 45.0%
TGCAGCCTCATTCGATAAAC+GGG + chr5_4:63146434-63146453 None:intergenic 45.0%
GTTTATCGAATGAGGCTGCA+TGG - chr5_4:63146434-63146453 Msa0863370:intron 45.0%
!! AAGCAAGAGGTACCTCATGA+CGG - chr5_4:63146869-63146888 Msa0863370:intron 45.0%
CAGCCATCCACAATATCTTC+AGG + chr5_4:63146923-63146942 None:intergenic 45.0%
CTGAAGATATTGTGGATGGC+TGG - chr5_4:63146921-63146940 Msa0863370:intron 45.0%
GAAGATATTGTGGATGGCTG+GGG - chr5_4:63146923-63146942 Msa0863370:intron 45.0%
AAACAAGAAACCAGCACCAC+GGG + chr5_4:63146957-63146976 None:intergenic 45.0%
CAAACAAGAAACCAGCACCA+CGG + chr5_4:63146958-63146977 None:intergenic 45.0%
! TTTGGTGGCAGTGTTGTTAC+TGG - chr5_4:63146974-63146993 Msa0863370:intron 45.0%
TATATGCCGAGCTCATCAGT+TGG - chr5_4:63147024-63147043 Msa0863370:intron 45.0%
CCATTACCAACTGATGAGCT+CGG + chr5_4:63147033-63147052 None:intergenic 45.0%
!! GCTCATCAGTTGGTAATGGA+AGG - chr5_4:63147034-63147053 Msa0863370:intron 45.0%
! TGGTAATGTAGCTGCGATTC+TGG - chr5_4:63147207-63147226 Msa0863370:intron 45.0%
ACTTTGCCAACAAACCTGTG+GGG + chr5_4:63147278-63147297 None:intergenic 45.0%
GACTTTGCCAACAAACCTGT+GGG + chr5_4:63147279-63147298 None:intergenic 45.0%
TGACTTTGCCAACAAACCTG+TGG + chr5_4:63147280-63147299 None:intergenic 45.0%
GGGATAATTGTCAGTTCTCG+AGG - chr5_4:63147761-63147780 Msa0863370:intron 45.0%
TTGGGAGTCCATATAACCTG+TGG - chr5_4:63147980-63147999 Msa0863370:intron 45.0%
!!! TGCTCTAGTTTTGCACTCTG+TGG - chr5_4:63148189-63148208 Msa0863370:five_prime_UTR 45.0%
!!! CTAGTTTTGCACTCTGTGGT+TGG - chr5_4:63148193-63148212 Msa0863370:five_prime_UTR 45.0%
!!! TTTTTTTTTTAAATATTGAT+TGG - chr5_4:63142052-63142071 Msa0863370:CDS 5.0%
!!! TTTTATTTTCTTTATTTTTT+AGG - chr5_4:63145178-63145197 Msa0863370:intron 5.0%
GAGAGATGTCAGACCTAGAC+AGG - chr5_4:63141097-63141116 Msa0863370:intron 50.0%
GTTGCTCTATCTGCCTGTCT+AGG + chr5_4:63141113-63141132 None:intergenic 50.0%
GCGTTTGTGACTGAGAAGAG+TGG - chr5_4:63142434-63142453 Msa0863370:intron 50.0%
CCCGTAAGCCCCATAATTCT+TGG + chr5_4:63142616-63142635 None:intergenic 50.0%
TGATGCGAAGTCAGTGTGGT+TGG - chr5_4:63142769-63142788 Msa0863370:intron 50.0%
GATGCGAAGTCAGTGTGGTT+GGG - chr5_4:63142770-63142789 Msa0863370:intron 50.0%
GAAGTCAGTGTGGTTGGGAA+TGG - chr5_4:63142775-63142794 Msa0863370:intron 50.0%
!! TCTGCTTTTGCTCGCTCTCA+AGG - chr5_4:63142996-63143015 Msa0863370:intron 50.0%
TGCCATCCCACATAAAGACG+TGG + chr5_4:63143445-63143464 None:intergenic 50.0%
TGTCTGGTTGTTGGTGCACT+TGG - chr5_4:63143581-63143600 Msa0863370:intron 50.0%
TGGTTGTTGGTGCACTTGGA+TGG - chr5_4:63143585-63143604 Msa0863370:intron 50.0%
ATAGGGGGCCAGAAAGTTTG+GGG + chr5_4:63143793-63143812 None:intergenic 50.0%
GAATAGGGGGCCAGAAAGTT+TGG + chr5_4:63143795-63143814 None:intergenic 50.0%
TTTGTTGGGCCTAGTTGAGG+GGG - chr5_4:63143856-63143875 Msa0863370:intron 50.0%
! GCTTAGGGGTCCTTGTTTGA+AGG - chr5_4:63143878-63143897 Msa0863370:intron 50.0%
! GAGAATACGGCGGTTTTACG+GGG + chr5_4:63143963-63143982 None:intergenic 50.0%
! GGAGAATACGGCGGTTTTAC+GGG + chr5_4:63143964-63143983 None:intergenic 50.0%
! CGGAGAATACGGCGGTTTTA+CGG + chr5_4:63143965-63143984 None:intergenic 50.0%
TGGAGGTCGAACGGAGAATA+CGG + chr5_4:63143976-63143995 None:intergenic 50.0%
AGGTATGAAGGATTCCGACC+AGG - chr5_4:63144015-63144034 Msa0863370:intron 50.0%
CCTCCGGAATCGTAACTTTC+CGG - chr5_4:63144105-63144124 Msa0863370:intron 50.0%
!!! AGTTTTTGAGATTCCGGCGG+CGG - chr5_4:63144225-63144244 Msa0863370:intron 50.0%
ATCGCGATCGTGAGTGTGTT+CGG - chr5_4:63144274-63144293 Msa0863370:intron 50.0%
TTTCGGCCCTCTTTGATGTG+TGG - chr5_4:63144591-63144610 Msa0863370:intron 50.0%
TTCGGCCCTCTTTGATGTGT+GGG - chr5_4:63144592-63144611 Msa0863370:intron 50.0%
AATGAGGGGTGACTAGTGAG+AGG - chr5_4:63144681-63144700 Msa0863370:intron 50.0%
GAGAACACTGAAGTTGGAGG+TGG - chr5_4:63144889-63144908 Msa0863370:intron 50.0%
AACACTGAAGTTGGAGGTGG+AGG - chr5_4:63144892-63144911 Msa0863370:intron 50.0%
ACACTGAAGTTGGAGGTGGA+GGG - chr5_4:63144893-63144912 Msa0863370:intron 50.0%
GACGAGTGCCTTCGGAAATA+TGG - chr5_4:63145670-63145689 Msa0863370:intron 50.0%
GTCTTTCCTTTCGCGGAGTA+AGG - chr5_4:63145859-63145878 Msa0863370:intron 50.0%
TAGTTGTTGGGGTCTTGGGA+GGG + chr5_4:63145898-63145917 None:intergenic 50.0%
! CTGACTAGTTGTTGGGGTCT+TGG + chr5_4:63145903-63145922 None:intergenic 50.0%
! TCCGTCTGTTTTGTGGGTAC+AGG - chr5_4:63146098-63146117 Msa0863370:intron 50.0%
CCCTGTACCCACAAAACAGA+CGG + chr5_4:63146102-63146121 None:intergenic 50.0%
! CCGTCTGTTTTGTGGGTACA+GGG - chr5_4:63146099-63146118 Msa0863370:intron 50.0%
! CGTCTGTTTTGTGGGTACAG+GGG - chr5_4:63146100-63146119 Msa0863370:intron 50.0%
TTAGAGGAACGGGGTTTAGG+TGG - chr5_4:63146229-63146248 Msa0863370:intron 50.0%
TAGGTGGATAGGAGCTAGCT+AGG - chr5_4:63146245-63146264 Msa0863370:intron 50.0%
TGACCATAGGAGGTCACACA+TGG + chr5_4:63146897-63146916 None:intergenic 50.0%
CTTCAGGATCTGACCATAGG+AGG + chr5_4:63146907-63146926 None:intergenic 50.0%
AACAAGAAACCAGCACCACG+GGG + chr5_4:63146956-63146975 None:intergenic 50.0%
!! CGTGGTGCTGGTTTCTTGTT+TGG - chr5_4:63146956-63146975 Msa0863370:intron 50.0%
!! GGTGCTGGTTTCTTGTTTGG+TGG - chr5_4:63146959-63146978 Msa0863370:intron 50.0%
!! CCGAGCTCATCAGTTGGTAA+TGG - chr5_4:63147030-63147049 Msa0863370:intron 50.0%
!! GCTGCGATTCTGGAGTTAGA+CGG - chr5_4:63147217-63147236 Msa0863370:intron 50.0%
! AATGTGCCGCTAATGCATCG+CGG - chr5_4:63147427-63147446 Msa0863370:intron 50.0%
TTGCAACCGCGATGCATTAG+CGG + chr5_4:63147436-63147455 None:intergenic 50.0%
!! GTAGTCTGGTGCTGGTTTCT+TGG + chr5_4:63147652-63147671 None:intergenic 50.0%
ACACGAATTGACAAACGGCG+AGG - chr5_4:63147710-63147729 Msa0863370:intron 50.0%
TGGGAATGGGGATACATGCG+AGG - chr5_4:63142705-63142724 Msa0863370:intron 55.0%
GCGATGATGCGAAGTCAGTG+TGG - chr5_4:63142765-63142784 Msa0863370:intron 55.0%
! TGGGTCTGCGTTTGGCTCAA+TGG - chr5_4:63143138-63143157 Msa0863370:CDS 55.0%
AGGTCGAACGGAGAATACGG+CGG + chr5_4:63143973-63143992 None:intergenic 55.0%
GAGGTTTACGGCGGTTATGG+AGG + chr5_4:63143993-63144012 None:intergenic 55.0%
GTGTGTGGCGTTTACCTGGT+CGG + chr5_4:63144032-63144051 None:intergenic 55.0%
TGGTGTGTGTGGCGTTTACC+TGG + chr5_4:63144036-63144055 None:intergenic 55.0%
CCGGAAAGTTACGATTCCGG+AGG + chr5_4:63144108-63144127 None:intergenic 55.0%
CCGCCGGAAAGTTACGATTC+CGG + chr5_4:63144111-63144130 None:intergenic 55.0%
CCGGAATCGTAACTTTCCGG+CGG - chr5_4:63144108-63144127 Msa0863370:intron 55.0%
! AGCTTCATCGACGGTGTCAG+AGG - chr5_4:63144160-63144179 Msa0863370:intron 55.0%
! TCATCGACGGTGTCAGAGGA+AGG - chr5_4:63144164-63144183 Msa0863370:intron 55.0%
GAACACACTCACGATCGCGA+TGG + chr5_4:63144275-63144294 None:intergenic 55.0%
CCCAGCCCACACATCAAAGA+GGG + chr5_4:63144600-63144619 None:intergenic 55.0%
CCCTCTTTGATGTGTGGGCT+GGG - chr5_4:63144597-63144616 Msa0863370:intron 55.0%
AGACAGCCTTACTCCGCGAA+AGG + chr5_4:63145868-63145887 None:intergenic 55.0%
CTAGTTGTTGGGGTCTTGGG+AGG + chr5_4:63145899-63145918 None:intergenic 55.0%
GGAACGGGGTTTAGGTGGAT+AGG - chr5_4:63146234-63146253 Msa0863370:intron 55.0%
CTAGCTAGGCCAAGACTCGA+AGG - chr5_4:63146259-63146278 Msa0863370:intron 55.0%
GGGCACCCGTTTATCGAATG+AGG - chr5_4:63146426-63146445 Msa0863370:intron 55.0%
TCACACATGGCACCGTCATG+AGG + chr5_4:63146884-63146903 None:intergenic 55.0%
GTGCCATGTGTGACCTCCTA+TGG - chr5_4:63146891-63146910 Msa0863370:intron 55.0%
TGTGTTTGATGCTGCCCCAC+AGG - chr5_4:63147261-63147280 Msa0863370:intron 55.0%
ATGCTGCCCCACAGGTTTGT+TGG - chr5_4:63147269-63147288 Msa0863370:intron 55.0%
TTTCCTCCTTGGTGGGGAGA+GGG + chr5_4:63147570-63147589 None:intergenic 55.0%
ATTTCCTCCTTGGTGGGGAG+AGG + chr5_4:63147571-63147590 None:intergenic 55.0%
!! TCTGGTGCTGGTTTCTTGGC+AGG + chr5_4:63147648-63147667 None:intergenic 55.0%
CGGCGAGGAGATGTCTGTAA+CGG - chr5_4:63147725-63147744 Msa0863370:intron 55.0%
GGCGAGGAGATGTCTGTAAC+GGG - chr5_4:63147726-63147745 Msa0863370:intron 55.0%
! GAGGAGATGTCTGTAACGGG+AGG - chr5_4:63147729-63147748 Msa0863370:intron 55.0%
! TGTAACGGGAGGAATCAGCG+AGG - chr5_4:63147740-63147759 Msa0863370:intron 55.0%
! GTAACGGGAGGAATCAGCGA+GGG - chr5_4:63147741-63147760 Msa0863370:intron 55.0%
GTTCTCGAGGCAGAAGAGTC+TGG - chr5_4:63147774-63147793 Msa0863370:intron 55.0%
GGCCTAGTTGAGGGGGCTTA+GGG - chr5_4:63143863-63143882 Msa0863370:intron 60.0%
GCCTAGTTGAGGGGGCTTAG+GGG - chr5_4:63143864-63143883 Msa0863370:intron 60.0%
ACCCCTAAGCCCCCTCAACT+AGG + chr5_4:63143868-63143887 None:intergenic 60.0%
! ACGGCGGTTTTACGGGGAAG+TGG + chr5_4:63143957-63143976 None:intergenic 60.0%
CGGCGGTTATGGAGGTCGAA+CGG + chr5_4:63143985-63144004 None:intergenic 60.0%
ACAGAATCTCACACCGCCGC+CGG + chr5_4:63144241-63144260 None:intergenic 60.0%
GCGGCGGTGTGAGATTCTGT+TGG - chr5_4:63144241-63144260 Msa0863370:intron 60.0%
GCCCTCTTTGATGTGTGGGC+TGG - chr5_4:63144596-63144615 Msa0863370:intron 60.0%
GCCCAGCCCACACATCAAAG+AGG + chr5_4:63144601-63144620 None:intergenic 60.0%
TTCCTCCTTGGTGGGGAGAG+GGG + chr5_4:63147569-63147588 None:intergenic 60.0%
GGGCCTAGTTGAGGGGGCTT+AGG - chr5_4:63143862-63143881 Msa0863370:intron 65.0%
CTACGGTGGATGCAGACCGC+CGG + chr5_4:63144127-63144146 None:intergenic 65.0%
GGTTTGAGTCCCCGTGGTGC+TGG - chr5_4:63146944-63146963 Msa0863370:intron 65.0%
GGCTGGGGTTTGAGTCCCCG+TGG - chr5_4:63146938-63146957 Msa0863370:intron 70.0%
GGTCTCCCCTCTCCCCACCA+AGG - chr5_4:63147561-63147580 Msa0863370:intron 70.0%
CTCCCCTCTCCCCACCAAGG+AGG - chr5_4:63147564-63147583 Msa0863370:intron 70.0%
Chromosome Type Strat End Strand Name
chr5_4 gene 63140944 63148341 63140944 ID=Msa0863370;Name=Msa0863370
chr5_4 mRNA 63140944 63148341 63140944 ID=Msa0863370-mRNA-1;Parent=Msa0863370;Name=Msa0863370-mRNA-1;_AED=0.23;_eAED=0.23;_QI=158|0.75|0.88|1|0.87|0.77|9|561|301
chr5_4 exon 63140944 63141105 63140944 ID=Msa0863370-mRNA-1:exon:19866;Parent=Msa0863370-mRNA-1
chr5_4 exon 63141206 63141655 63141206 ID=Msa0863370-mRNA-1:exon:19865;Parent=Msa0863370-mRNA-1
chr5_4 exon 63142003 63142081 63142003 ID=Msa0863370-mRNA-1:exon:19864;Parent=Msa0863370-mRNA-1
chr5_4 exon 63142166 63142434 63142166 ID=Msa0863370-mRNA-1:exon:19863;Parent=Msa0863370-mRNA-1
chr5_4 exon 63142522 63142597 63142522 ID=Msa0863370-mRNA-1:exon:19862;Parent=Msa0863370-mRNA-1
chr5_4 exon 63143092 63143165 63143092 ID=Msa0863370-mRNA-1:exon:19861;Parent=Msa0863370-mRNA-1
chr5_4 exon 63143747 63143809 63143747 ID=Msa0863370-mRNA-1:exon:19860;Parent=Msa0863370-mRNA-1
chr5_4 exon 63146268 63146420 63146268 ID=Msa0863370-mRNA-1:exon:19859;Parent=Msa0863370-mRNA-1
chr5_4 exon 63148043 63148341 63148043 ID=Msa0863370-mRNA-1:exon:19858;Parent=Msa0863370-mRNA-1
chr5_4 five_prime_UTR 63148184 63148341 63148184 ID=Msa0863370-mRNA-1:five_prime_utr;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63148043 63148183 63148043 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63146268 63146420 63146268 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63143747 63143809 63143747 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63143092 63143165 63143092 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63142522 63142597 63142522 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63142166 63142434 63142166 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63142003 63142081 63142003 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 CDS 63141605 63141655 63141605 ID=Msa0863370-mRNA-1:cds;Parent=Msa0863370-mRNA-1
chr5_4 three_prime_UTR 63141206 63141604 63141206 ID=Msa0863370-mRNA-1:three_prime_utr;Parent=Msa0863370-mRNA-1
chr5_4 three_prime_UTR 63140944 63141105 63140944 ID=Msa0863370-mRNA-1:three_prime_utr;Parent=Msa0863370-mRNA-1
Gene Sequence

>Msa0863370

ATGTCAGACCTAGACAGGCAGATAGAGCAACTGAAGAGATGCGAACCATTGAAGGAATCTGAAGTCAAATCTCTCTGTCTCAAAGCCATCGAAATCCTTGTTGAAGAAAGTAATGTTCAAAGGGTCGATGCCCCTGTCACCATATGTGGGGATATTCACGGACAGTTTTATGACATGAAGGAGCTTTTTAAAGTTGGTGGTGATTGCCCTAAAACAAATTATTTGTTCCTTGGGGATTTTGTTGATAGAGGATTTTACTCTGTCGAAACGTTTCTGCTTTTGCTCGCTCTCAAGGTGAGATATCCAGATCGGATAACGCTTATTAGGGGAAACCATGAAAGTCGTCAGATCACACAGGGGCCACGTGTGATTTTCTTTGTTATTCTTTCGACTGTCAAATTCATGATTGAAGGGTGTCTACCATTGACACTCTTGTCTGCTCTAATTGAAAACAAGATTTTCAGTGTTCATGGTGGTCTTTCTCCTGCTATTTCAACATTGGATCAGATACGAACTATTGATAGAAAGCAAGAGGTACCTCATGACGGTGCCATGTGTGACCTCCTATGGTCAGATCCTGAAGATATTGTGGATGGCTGGGGTTTGAGTCCCCGTGGTGCTGGTTTCTTGTTTGGTGGCAGTGTTGTTACTGGTTTTAACCACACCAATAACATTGACTATATATGCCGAGCTCATCAGTTGGTAATGGAAGGATATAAATGGATGTTCAATAATCAGATAGTTACTGTCTGGTCAGCTCCAAATTATTGCTACAGATGTGGTAATGTAGCTGCGATTCTGGAGTTAGACGGTAATCTTAATAAGCAGTTTCGTGTGTTTGATGCTGCCCCACAGGAATCAAGAGGTGCACCTGCCAAGAAACCAGCACCAGACTACTTCTTATAA
Protein sequence

>Msa0863370

MSDLDRQIEQLKRCEPLKESEVKSLCLKAIEILVEESNVQRVDAPVTICGDIHGQFYDMKELFKVGGDCPKTNYLFLGDFVDRGFYSVETFLLLLALKVRYPDRITLIRGNHESRQITQGPRVIFFVILSTVKFMIEGCLPLTLLSALIENKIFSVHGGLSPAISTLDQIRTIDRKQEVPHDGAMCDLLWSDPEDIVDGWGLSPRGAGFLFGGSVVTGFNHTNNIDYICRAHQLVMEGYKWMFNNQIVTVWSAPNYCYRCGNVAAILELDGNLNKQFRVFDAAPQESRGAPAKKPAPDYFL*