Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255690 | XP_013464613.1 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 1.64e-161 | 454 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255690 | sp|F4JL28|EBS_ARATH | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.51e-138 | 389 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255690 | I3T296 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 7.81e-162 | 454 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0255690 | TR | PHD |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0016670 | Msa0255690 | 0.803885 | 2.815556e-49 | -8.615850e-47 |
| Msa0017510 | Msa0255690 | 0.820109 | 8.158534e-53 | -8.615850e-47 |
| Msa0028420 | Msa0255690 | 0.804972 | 1.671254e-49 | -8.615850e-47 |
| Msa0076310 | Msa0255690 | 0.810251 | 1.265124e-50 | -8.615850e-47 |
| Msa0110970 | Msa0255690 | 0.824067 | 9.865329e-54 | -8.615850e-47 |
| Msa0157290 | Msa0255690 | 0.819966 | 8.796220e-53 | -8.615850e-47 |
| Msa0197230 | Msa0255690 | 0.811006 | 8.687275e-51 | -8.615850e-47 |
| Msa0238890 | Msa0255690 | 0.823470 | 1.361172e-53 | -8.615850e-47 |
| Msa0255690 | Msa0289890 | 0.802187 | 6.318532e-49 | -8.615850e-47 |
| Msa0255690 | Msa0308830 | 0.812427 | 4.263986e-51 | -8.615850e-47 |
| Msa0255690 | Msa0332920 | 0.815414 | 9.358125e-52 | -8.615850e-47 |
| Msa0255690 | Msa0388160 | 0.826092 | 3.279811e-54 | -8.615850e-47 |
| Msa0255690 | Msa0410650 | 0.822114 | 2.816130e-53 | -8.615850e-47 |
| Msa0255690 | Msa0422850 | 0.801513 | 8.689395e-49 | -8.615850e-47 |
| Msa0255690 | Msa0422930 | 0.801658 | 8.115041e-49 | -8.615850e-47 |
| Msa0255690 | Msa0507680 | 0.802824 | 4.669292e-49 | -8.615850e-47 |
| Msa0255690 | Msa0527550 | 0.801289 | 9.660150e-49 | -8.615850e-47 |
| Msa0255690 | Msa0566030 | 0.813972 | 1.952631e-51 | -8.615850e-47 |
| Msa0255690 | Msa0743200 | 0.831467 | 1.641770e-55 | -8.615850e-47 |
| Msa0255690 | Msa0754520 | 0.837632 | 4.634482e-57 | -8.615850e-47 |
| Msa0255690 | Msa0760380 | 0.816034 | 6.809048e-52 | -8.615850e-47 |
| Msa0255690 | Msa0787260 | 0.822617 | 2.152591e-53 | -8.615850e-47 |
| Msa0255690 | Msa0788410 | 0.807065 | 6.063285e-50 | -8.615850e-47 |
| Msa0255690 | Msa0824680 | 0.802628 | 5.126002e-49 | -8.615850e-47 |
| Msa0255690 | Msa0826580 | 0.849558 | 2.994068e-60 | -8.615850e-47 |
| Msa0255690 | Msa0833220 | 0.839289 | 1.732633e-57 | -8.615850e-47 |
| Msa0255690 | Msa0862100 | 0.806360 | 8.544495e-50 | -8.615850e-47 |
| Msa0255690 | Msa0863370 | 0.816544 | 5.236623e-52 | -8.615850e-47 |
| Msa0255690 | Msa0863870 | 0.817622 | 2.997772e-52 | -8.615850e-47 |
| Msa0255690 | Msa0864630 | 0.807100 | 5.959961e-50 | -8.615850e-47 |
| Msa0255690 | Msa0880140 | 0.817979 | 2.489411e-52 | -8.615850e-47 |
| Msa0255690 | Msa0896970 | 0.801436 | 9.010383e-49 | -8.615850e-47 |
| Msa0255690 | Msa0930780 | 0.807459 | 5.002387e-50 | -8.615850e-47 |
| Msa0255690 | Msa0936340 | 0.804458 | 2.139399e-49 | -8.615850e-47 |
| Msa0255690 | Msa1085200 | 0.816603 | 5.079139e-52 | -8.615850e-47 |
| Msa0255690 | Msa1111630 | 0.801109 | 1.051376e-48 | -8.615850e-47 |
| Msa0255690 | Msa1127950 | 0.815217 | 1.035096e-51 | -8.615850e-47 |
| Msa0255690 | Msa1129980 | 0.804771 | 1.841101e-49 | -8.615850e-47 |
| Msa0255690 | Msa1139810 | 0.819799 | 9.605070e-53 | -8.615850e-47 |
| Msa0255690 | Msa1167170 | 0.801159 | 1.026726e-48 | -8.615850e-47 |
| Msa0255690 | Msa1201650 | 0.808847 | 2.532543e-50 | -8.615850e-47 |
| Msa0255690 | Msa1242230 | 0.803670 | 3.119960e-49 | -8.615850e-47 |
| Msa0255690 | Msa1242240 | 0.800101 | 1.688076e-48 | -8.615850e-47 |
| Msa0255690 | Msa1271290 | 0.805780 | 1.131620e-49 | -8.615850e-47 |
| Msa0255690 | Msa1278840 | 0.808474 | 3.042200e-50 | -8.615850e-47 |
| Msa0255690 | Msa1292830 | 0.800392 | 1.472327e-48 | -8.615850e-47 |
| Msa0255690 | Msa1351760 | 0.828474 | 8.813914e-55 | -8.615850e-47 |
| Msa0255690 | Msa1365060 | 0.805054 | 1.606640e-49 | -8.615850e-47 |
| Msa0255690 | Msa1374550 | 0.802896 | 4.512106e-49 | -8.615850e-47 |
| Msa0255690 | Msa1430240 | 0.809204 | 2.124112e-50 | -8.615850e-47 |
| Msa0255690 | Msa1433710 | 0.998043 | 8.438489e-255 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255690 | MtrunA17_Chr2g0316511 | 99.541 | 218 | 1 | 0 | 1 | 218 | 1 | 218 | 1.50e-165 | 454 |
| Msa0255690 | MtrunA17_Chr3g0145031 | 67.123 | 219 | 68 | 3 | 1 | 216 | 1 | 218 | 4.55e-111 | 317 |
| Msa0255690 | MtrunA17_Chr2g0324381 | 64.398 | 191 | 63 | 3 | 1 | 189 | 10 | 197 | 4.82e-81 | 240 |
| Msa0255690 | MtrunA17_Chr3g0145041 | 57.513 | 193 | 78 | 2 | 24 | 216 | 8 | 196 | 1.16e-79 | 236 |
| Msa0255690 | MtrunA17_Chr5g0447451 | 48.819 | 127 | 55 | 5 | 71 | 187 | 15 | 141 | 1.98e-33 | 117 |
| Msa0255690 | MtrunA17_Chr2g0324361 | 57.576 | 99 | 39 | 2 | 25 | 123 | 12 | 107 | 9.70e-33 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0255690 | AT4G22140.2 | 84.375 | 224 | 27 | 1 | 1 | 216 | 1 | 224 | 8.57e-144 | 400 |
| Msa0255690 | AT4G22140.1 | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.56e-139 | 389 |
| Msa0255690 | AT4G22140.3 | 84.332 | 217 | 26 | 1 | 1 | 209 | 1 | 217 | 2.56e-139 | 389 |
| Msa0255690 | AT4G04260.2 | 75.543 | 184 | 43 | 2 | 26 | 208 | 9 | 191 | 9.06e-97 | 281 |
| Msa0255690 | AT4G39100.1 | 62.150 | 214 | 78 | 2 | 1 | 213 | 1 | 212 | 1.29e-96 | 281 |
| Msa0255690 | AT4G04260.1 | 74.860 | 179 | 43 | 2 | 31 | 208 | 1 | 178 | 1.67e-92 | 269 |
| Msa0255690 | AT4G39100.2 | 67.485 | 163 | 52 | 1 | 1 | 162 | 1 | 163 | 2.16e-81 | 240 |
| Msa0255690 | AT4G04260.3 | 76.429 | 140 | 32 | 1 | 1 | 139 | 1 | 140 | 4.69e-73 | 218 |
Find 69 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCTTTCTGAACAGAAAA+AGG | 0.288644 | 2_2:+49885072 | None:intergenic |
| TATCGAAGAAGCAAAGAAAT+TGG | 0.293372 | 2_2:-49886929 | Msa0255690:CDS |
| AGGTTTGAAAATGGTGAAAA+AGG | 0.319346 | 2_2:+49888534 | None:intergenic |
| GGAACAAACAAGGTTGTTAA+AGG | 0.327215 | 2_2:-49888397 | Msa0255690:intron |
| ATTAGGTCATCCGGGTTATA+AGG | 0.334913 | 2_2:+49887684 | None:intergenic |
| CTTCCACCAATAGATTCTTC+AGG | 0.349796 | 2_2:+49888046 | None:intergenic |
| CACTGCACCATTAGGTCATC+CGG | 0.369370 | 2_2:+49887675 | None:intergenic |
| TAAGGTTTGAGGTTTGAAAA+TGG | 0.384703 | 2_2:+49888525 | None:intergenic |
| CTATCAGATCCTGGTGATAC+AGG | 0.385003 | 2_2:+49886844 | None:intergenic |
| TAAAGAGTGAATGAAACCTT+AGG | 0.390761 | 2_2:-49888615 | Msa0255690:five_prime_UTR |
| AACATTCAGAACAAACAAAA+TGG | 0.403224 | 2_2:+49886905 | None:intergenic |
| AGAAGATCGAGCAAGATAAT+AGG | 0.403757 | 2_2:-49888105 | Msa0255690:CDS |
| TGCTGAAATGCTAAGGTTTG+AGG | 0.409965 | 2_2:+49888514 | None:intergenic |
| GTTCTGAGGATTACTATTGT+AGG | 0.415271 | 2_2:-49887898 | Msa0255690:CDS |
| ACCCTTCACACTGCACCATT+AGG | 0.433071 | 2_2:+49887667 | None:intergenic |
| TGATGCAGAAATGCAACTTT+TGG | 0.433600 | 2_2:-49885243 | Msa0255690:three_prime_UTR |
| TCAAGGTTTGATGTTATCTC+AGG | 0.436239 | 2_2:+49885034 | None:intergenic |
| GGTGGAAGAAGACAGTTTCA+TGG | 0.437599 | 2_2:-49888031 | Msa0255690:CDS |
| CAAAGTGCTCACACTATTGA+AGG | 0.439100 | 2_2:-49887971 | Msa0255690:CDS |
| TTATAACCCGGATGACCTAA+TGG | 0.443180 | 2_2:-49887682 | Msa0255690:CDS |
| TATGAGCGTGACGATTCATT+TGG | 0.452589 | 2_2:+49888641 | None:intergenic |
| TGTTGTTGTACAACTTTCAC+CGG | 0.462354 | 2_2:-49885195 | Msa0255690:three_prime_UTR |
| TTGTACAACTTTCACCGGAT+TGG | 0.467529 | 2_2:-49885190 | Msa0255690:three_prime_UTR |
| GGTCCTCTCTTTCGCCGCTT+CGG | 0.470540 | 2_2:+49885267 | None:intergenic |
| CTCACCTTGCTATCAGATCC+TGG | 0.485170 | 2_2:+49886835 | None:intergenic |
| CTTCTCCACACGTGCCACAT+AGG | 0.490109 | 2_2:+49888123 | None:intergenic |
| GAGCACTTTGAACATCAAAA+TGG | 0.494985 | 2_2:+49887984 | None:intergenic |
| TATAGACCTGAAGAATCTAT+TGG | 0.496809 | 2_2:-49888052 | Msa0255690:CDS |
| AAAGTTGCATTTCTGCATCA+TGG | 0.501663 | 2_2:+49885246 | None:intergenic |
| TAGGTACCATCCTGCTTGTG+TGG | 0.503860 | 2_2:-49886959 | Msa0255690:CDS |
| ACTCACACAGCAACACGGTC+AGG | 0.504648 | 2_2:+49887842 | None:intergenic |
| TTTGAGTATAAAGCTGCTAC+TGG | 0.508499 | 2_2:-49887875 | Msa0255690:CDS |
| TTCTCCACACGTGCCACATA+GGG | 0.531360 | 2_2:+49888124 | None:intergenic |
| GAGCCGAAGCGGCGAAAGAG+AGG | 0.538999 | 2_2:-49885270 | Msa0255690:CDS |
| AAAGAGTGAATGAAACCTTA+GGG | 0.541136 | 2_2:-49888614 | Msa0255690:five_prime_UTR |
| CACATGGCGAAGACAAGACC+AGG | 0.545829 | 2_2:-49888451 | Msa0255690:CDS |
| TATACTAAGCTTGAGAATGT+AGG | 0.549874 | 2_2:-49887920 | Msa0255690:CDS |
| AAAGGGTTGCTGAAATGCTA+AGG | 0.550212 | 2_2:+49888507 | None:intergenic |
| AAGACAGTTTCATGGAGCTA+AGG | 0.559466 | 2_2:-49888023 | Msa0255690:CDS |
| GACCTAATGGTGCAGTGTGA+AGG | 0.564361 | 2_2:-49887669 | Msa0255690:CDS |
| AAGATAATAGGAACAATGTG+AGG | 0.571957 | 2_2:-49888093 | Msa0255690:CDS |
| GCTTGAGAATGTAGGTTCTG+AGG | 0.572249 | 2_2:-49887912 | Msa0255690:CDS |
| ATAGTCATGCCCACACAAGC+AGG | 0.572617 | 2_2:+49886949 | None:intergenic |
| CACGAGTAAGCCACCCTATG+TGG | 0.577004 | 2_2:-49888137 | Msa0255690:CDS |
| AGAAGAACAGAGGAACCCTA+AGG | 0.584772 | 2_2:+49888599 | None:intergenic |
| AGTGTGAAGGGTGCAAGGAT+TGG | 0.587494 | 2_2:-49887656 | Msa0255690:intron |
| GCCACCCTATGTGGCACGTG+TGG | 0.588251 | 2_2:-49888128 | Msa0255690:CDS |
| ATGCGAGATGCCTTATAACC+CGG | 0.597197 | 2_2:-49887694 | Msa0255690:CDS |
| TCCACACGTGCCACATAGGG+TGG | 0.599622 | 2_2:+49888127 | None:intergenic |
| AGACCTGAAGAATCTATTGG+TGG | 0.602382 | 2_2:-49888049 | Msa0255690:CDS |
| ACCTAATGGTGCAGTGTGAA+GGG | 0.605001 | 2_2:-49887668 | Msa0255690:CDS |
| ACTGCACCATTAGGTCATCC+GGG | 0.612849 | 2_2:+49887676 | None:intergenic |
| CGATGATTTGAAGAAACCAC+AGG | 0.614767 | 2_2:-49886875 | Msa0255690:CDS |
| AGGTACCATCCTGCTTGTGT+GGG | 0.617835 | 2_2:-49886958 | Msa0255690:CDS |
| CACAATCAGAGGAACAAACA+AGG | 0.620724 | 2_2:-49888407 | Msa0255690:CDS |
| GCGGCGTTTCCTGTATCACC+AGG | 0.621923 | 2_2:-49886853 | Msa0255690:CDS |
| ATCACCAGGATCTGATAGCA+AGG | 0.624737 | 2_2:-49886839 | Msa0255690:intron |
| ATGTGAGGGTTCGTGTGAGA+TGG | 0.629136 | 2_2:-49888078 | Msa0255690:CDS |
| GATACAGGAAACGCCGCCTG+TGG | 0.630270 | 2_2:+49886859 | None:intergenic |
| GGTGGCTTACTCGTGTCAGA+AGG | 0.633090 | 2_2:+49888145 | None:intergenic |
| AAAGTGCTCACACTATTGAA+GGG | 0.633847 | 2_2:-49887970 | Msa0255690:CDS |
| ACACAAAATAGCTACCACAT+AGG | 0.637061 | 2_2:+49885215 | None:intergenic |
| ATGGACTCATACACAATCAG+AGG | 0.637106 | 2_2:-49888418 | Msa0255690:CDS |
| GGTGCAGTGTGAAGGGTGCA+AGG | 0.638726 | 2_2:-49887661 | Msa0255690:CDS |
| TGCGTTAAGAAGAAGAACAG+AGG | 0.645756 | 2_2:+49888589 | None:intergenic |
| AGATAATAGGAACAATGTGA+GGG | 0.647787 | 2_2:-49888092 | Msa0255690:CDS |
| TCATGCCCACACAAGCAGGA+TGG | 0.663384 | 2_2:+49886953 | None:intergenic |
| GAGAGACTCAAACACACACA+TGG | 0.668411 | 2_2:-49888467 | Msa0255690:exon |
| TGATTTGAAGAAACCACAGG+CGG | 0.754665 | 2_2:-49886872 | Msa0255690:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CATATATTCTAATTAAAATT+TGG | - | chr2_2:49886955-49886974 | Msa0255690:CDS | 10.0% |
| !! | TTGAAAAAAAATAACATATA+TGG | - | chr2_2:49887323-49887342 | Msa0255690:intron | 10.0% |
| !! | ATCAAATTTACAAAAATTTA+CGG | + | chr2_2:49887555-49887574 | None:intergenic | 10.0% |
| !!! | TTTAAATTTTGTGTTTTTTG+AGG | - | chr2_2:49885373-49885392 | Msa0255690:intron | 15.0% |
| !!! | ATTTAGTTCTAAATATTATG+AGG | - | chr2_2:49886808-49886827 | Msa0255690:intron | 15.0% |
| !!! | AAAGAATTTTGAGAAAAAAA+CGG | + | chr2_2:49887026-49887045 | None:intergenic | 15.0% |
| !!! | ACCTTTATAAATTTTAAATG+TGG | - | chr2_2:49887143-49887162 | Msa0255690:intron | 15.0% |
| !!! | ACCACATTTAAAATTTATAA+AGG | + | chr2_2:49887147-49887166 | None:intergenic | 15.0% |
| !! | TCAAATTTACAAAAATTTAC+GGG | + | chr2_2:49887554-49887573 | None:intergenic | 15.0% |
| !!! | ATTTTGTGAGTAATAAATAA+TGG | - | chr2_2:49888143-49888162 | Msa0255690:CDS | 15.0% |
| !!! | TTTTTCACTTAAAATATTCA+AGG | + | chr2_2:49888585-49888604 | None:intergenic | 15.0% |
| !!! | TGAATATTTTAAGTGAAAAA+TGG | - | chr2_2:49888585-49888604 | Msa0255690:five_prime_UTR | 15.0% |
| !!! | TTTTGAATAATTTGCTGATT+TGG | - | chr2_2:49885857-49885876 | Msa0255690:intron | 20.0% |
| !! | CAAATGCTAAAATTAGATAT+CGG | + | chr2_2:49886020-49886039 | None:intergenic | 20.0% |
| !!! | TTTTGATGAATGAATATATG+TGG | - | chr2_2:49886061-49886080 | Msa0255690:intron | 20.0% |
| !!! | AATTTTAGCTCTTGTATTAA+CGG | + | chr2_2:49886285-49886304 | None:intergenic | 20.0% |
| !!! | GTTTATTTTTTCCAATCTAT+AGG | - | chr2_2:49886413-49886432 | Msa0255690:intron | 20.0% |
| !! | TCATAAATTGAATTATGCAA+GGG | - | chr2_2:49886436-49886455 | Msa0255690:intron | 20.0% |
| !!! | GCAAAAGATTATTGAATTTT+TGG | - | chr2_2:49886520-49886539 | Msa0255690:intron | 20.0% |
| !! | TACCTTTCATAAAATATAGA+GGG | + | chr2_2:49886595-49886614 | None:intergenic | 20.0% |
| !! | TAATCAGTAGTTAATATCTA+GGG | - | chr2_2:49887632-49887651 | Msa0255690:intron | 20.0% |
| !! | TTATATTTAAGCTTATCTGA+TGG | - | chr2_2:49887671-49887690 | Msa0255690:CDS | 20.0% |
| !!! | GTTGTTTTTATAAGCAATAT+TGG | + | chr2_2:49887788-49887807 | None:intergenic | 20.0% |
| !!! | TCAAGTTTTTTATTCCTTTT+TGG | - | chr2_2:49888178-49888197 | Msa0255690:intron | 20.0% |
| !!! | ACATAATCTCTTTTAATCAA+TGG | - | chr2_2:49888201-49888220 | Msa0255690:intron | 20.0% |
| !!! | ATTATTTTGATTGACACTAT+AGG | - | chr2_2:49888247-49888266 | Msa0255690:intron | 20.0% |
| !!! | TTATTTTGATTGACACTATA+GGG | - | chr2_2:49888248-49888267 | Msa0255690:intron | 20.0% |
| !! | TTTTATGAACCCTAAAATTG+TGG | + | chr2_2:49885039-49885058 | None:intergenic | 25.0% |
| !! | CTTCAAAATCGTTTCTTTTA+TGG | - | chr2_2:49885286-49885305 | Msa0255690:intron | 25.0% |
| ! | AGAAATGTGTAAAACTATGT+GGG | - | chr2_2:49885321-49885340 | Msa0255690:intron | 25.0% |
| !! | GTTTAGATTCAAGAAAGTTT+TGG | - | chr2_2:49885348-49885367 | Msa0255690:intron | 25.0% |
| ! | AATAAAGAACCAAAAACGAA+AGG | + | chr2_2:49885795-49885814 | None:intergenic | 25.0% |
| ! | CAAATACTCAAAACTCAATT+AGG | + | chr2_2:49885820-49885839 | None:intergenic | 25.0% |
| !!! | TTTGAGTATTTGATTTGATG+AGG | - | chr2_2:49885828-49885847 | Msa0255690:intron | 25.0% |
| !!! | CGATATCTAATTTTAGCATT+TGG | - | chr2_2:49886018-49886037 | Msa0255690:intron | 25.0% |
| ! | TGTAATACATTCTCTGTTAT+TGG | - | chr2_2:49886162-49886181 | Msa0255690:intron | 25.0% |
| ! | AAAGTAAAACAGATAAATGC+TGG | - | chr2_2:49886228-49886247 | Msa0255690:intron | 25.0% |
| ! | TTCAAACAACGAAAAACAAT+TGG | + | chr2_2:49886326-49886345 | None:intergenic | 25.0% |
| ! | TCAATTTATGACCTATAGAT+TGG | + | chr2_2:49886427-49886446 | None:intergenic | 25.0% |
| ! | GTCATAAATTGAATTATGCA+AGG | - | chr2_2:49886435-49886454 | Msa0255690:intron | 25.0% |
| !!! | ATATGCTATATTGGCTTTTT+AGG | - | chr2_2:49886558-49886577 | Msa0255690:intron | 25.0% |
| !! | TTCCCTCTATATTTTATGAA+AGG | - | chr2_2:49886590-49886609 | Msa0255690:intron | 25.0% |
| ! | GTACCTTTCATAAAATATAG+AGG | + | chr2_2:49886596-49886615 | None:intergenic | 25.0% |
| ! | AACATTCAGAACAAACAAAA+TGG | + | chr2_2:49886697-49886716 | None:intergenic | 25.0% |
| ! | TTTAATCATATTGCAGCATT+AGG | + | chr2_2:49887093-49887112 | None:intergenic | 25.0% |
| ! | AATGCTGCAATATGATTAAA+AGG | - | chr2_2:49887093-49887112 | Msa0255690:intron | 25.0% |
| ! | ATGCTGCAATATGATTAAAA+GGG | - | chr2_2:49887094-49887113 | Msa0255690:intron | 25.0% |
| !!! | AAATGTGGTTTTGATATCTA+TGG | - | chr2_2:49887158-49887177 | Msa0255690:intron | 25.0% |
| ! | ATTGACATCAGAAATTATCT+AGG | - | chr2_2:49887248-49887267 | Msa0255690:intron | 25.0% |
| !! | GGATAGAGTTTAAAACAAAA+GGG | + | chr2_2:49887416-49887435 | None:intergenic | 25.0% |
| ! | TACCAAGGTAAAAGATAAAA+CGG | + | chr2_2:49887437-49887456 | None:intergenic | 25.0% |
| ! | TGTGAAATATAGTTCGAAAA+AGG | + | chr2_2:49887486-49887505 | None:intergenic | 25.0% |
| ! | GTAATCAGTAGTTAATATCT+AGG | - | chr2_2:49887631-49887650 | Msa0255690:intron | 25.0% |
| ! | AATCAGTAGTTAATATCTAG+GGG | - | chr2_2:49887633-49887652 | Msa0255690:intron | 25.0% |
| !! | ATTCTAACAATTTGAAGCTT+TGG | - | chr2_2:49888012-49888031 | Msa0255690:CDS | 25.0% |
| !! | TTTGGTGATCTGATAAAATA+AGG | - | chr2_2:49888035-49888054 | Msa0255690:CDS | 25.0% |
| !! | TTGGTGATCTGATAAAATAA+GGG | - | chr2_2:49888036-49888055 | Msa0255690:CDS | 25.0% |
| !! | TGGCTTTTACAAGAAAATAA+AGG | + | chr2_2:49888110-49888129 | None:intergenic | 25.0% |
| ! | TTGTGAGTAATAAATAATGG+AGG | - | chr2_2:49888146-49888165 | Msa0255690:CDS | 25.0% |
| ! | AAAAGAGATTATGTCCAAAA+AGG | + | chr2_2:49888195-49888214 | None:intergenic | 25.0% |
| ! | AGAAAAAGGAAACACATAAA+TGG | + | chr2_2:49888516-49888535 | None:intergenic | 25.0% |
| ! | TAATCTTTCTGAACAGAAAA+AGG | + | chr2_2:49888530-49888549 | None:intergenic | 25.0% |
| TAAAGAGTGAATGAAACCTT+AGG | - | chr2_2:49884984-49885003 | Msa0255690:three_prime_UTR | 30.0% | |
| AAAGAGTGAATGAAACCTTA+GGG | - | chr2_2:49884985-49885004 | Msa0255690:three_prime_UTR | 30.0% | |
| ! | TAACGCAAAACCACAATTTT+AGG | - | chr2_2:49885026-49885045 | Msa0255690:three_prime_UTR | 30.0% |
| ! | AACGCAAAACCACAATTTTA+GGG | - | chr2_2:49885027-49885046 | Msa0255690:three_prime_UTR | 30.0% |
| AGGTTTGAAAATGGTGAAAA+AGG | + | chr2_2:49885068-49885087 | None:intergenic | 30.0% | |
| ! | TAAGGTTTGAGGTTTGAAAA+TGG | + | chr2_2:49885077-49885096 | None:intergenic | 30.0% |
| !!! | TAAGCACTTTTTTCGCAAAA+GGG | + | chr2_2:49885112-49885131 | None:intergenic | 30.0% |
| CAAAAACAAAAGGGTTTCAA+GGG | + | chr2_2:49885243-49885262 | None:intergenic | 30.0% | |
| ACAAAAACAAAAGGGTTTCA+AGG | + | chr2_2:49885244-49885263 | None:intergenic | 30.0% | |
| GAGAAATGTGTAAAACTATG+TGG | - | chr2_2:49885320-49885339 | Msa0255690:intron | 30.0% | |
| AAGATAATAGGAACAATGTG+AGG | - | chr2_2:49885506-49885525 | Msa0255690:intron | 30.0% | |
| AGATAATAGGAACAATGTGA+GGG | - | chr2_2:49885507-49885526 | Msa0255690:intron | 30.0% | |
| TATAGACCTGAAGAATCTAT+TGG | - | chr2_2:49885547-49885566 | Msa0255690:intron | 30.0% | |
| TATACTAAGCTTGAGAATGT+AGG | - | chr2_2:49885679-49885698 | Msa0255690:intron | 30.0% | |
| TCAATCTTTATCGTTCTTCT+AGG | + | chr2_2:49886098-49886117 | None:intergenic | 30.0% | |
| AACAGATAAATGCTGGAAAT+AGG | - | chr2_2:49886235-49886254 | Msa0255690:intron | 30.0% | |
| ACAGATAAATGCTGGAAATA+GGG | - | chr2_2:49886236-49886255 | Msa0255690:intron | 30.0% | |
| AAACAACGAAAAACAATTGG+AGG | + | chr2_2:49886323-49886342 | None:intergenic | 30.0% | |
| TGAGAAGTCATATGCTATAT+TGG | - | chr2_2:49886549-49886568 | Msa0255690:intron | 30.0% | |
| ! | TCATTTTGTAGGTTTCTTGT+AGG | - | chr2_2:49886621-49886640 | Msa0255690:intron | 30.0% |
| TATCGAAGAAGCAAAGAAAT+TGG | - | chr2_2:49886670-49886689 | Msa0255690:intron | 30.0% | |
| ATTGTGTGTTTCTTCATTCT+TGG | - | chr2_2:49886982-49887001 | Msa0255690:intron | 30.0% | |
| ! | CGGATAGAGTTTAAAACAAA+AGG | + | chr2_2:49887417-49887436 | None:intergenic | 30.0% |
| ! | ATCCGTTTTATCTTTTACCT+TGG | - | chr2_2:49887432-49887451 | Msa0255690:intron | 30.0% |
| GAAATATAGTTCGAAAAAGG+AGG | + | chr2_2:49887483-49887502 | None:intergenic | 30.0% | |
| TTATGTCAAACAACTCAAAC+AGG | + | chr2_2:49887601-49887620 | None:intergenic | 30.0% | |
| AAATATAAGCCAATCCAAAC+AGG | + | chr2_2:49887659-49887678 | None:intergenic | 30.0% | |
| ! | TTATCTGATGGCATAAGTTT+TGG | - | chr2_2:49887683-49887702 | Msa0255690:CDS | 30.0% |
| ! | TATCTGATGGCATAAGTTTT+GGG | - | chr2_2:49887684-49887703 | Msa0255690:CDS | 30.0% |
| !! | AAGATCATTTAGGGTCTTTT+CGG | + | chr2_2:49887940-49887959 | None:intergenic | 30.0% |
| ! | AAAGACCCTAAATGATCTTT+TGG | - | chr2_2:49887941-49887960 | Msa0255690:CDS | 30.0% |
| CACTACCAAAAGATCATTTA+GGG | + | chr2_2:49887949-49887968 | None:intergenic | 30.0% | |
| ! | AACAATTTGAAGCTTTGGTT+TGG | - | chr2_2:49888017-49888036 | Msa0255690:CDS | 30.0% |
| TGGTGATCTGATAAAATAAG+GGG | - | chr2_2:49888037-49888056 | Msa0255690:CDS | 30.0% | |
| ACAAAATGAACACTGCTTAA+TGG | + | chr2_2:49888130-49888149 | None:intergenic | 30.0% | |
| TAAAAACATTGCATCCAATC+CGG | + | chr2_2:49888426-49888445 | None:intergenic | 30.0% | |
| !!! | TTTATTTTGACAGCAAGTCT+CGG | - | chr2_2:49888452-49888471 | Msa0255690:exon | 30.0% |
| !!! | CTAAGCACTTTTTTCGCAAA+AGG | + | chr2_2:49885113-49885132 | None:intergenic | 35.0% |
| GGAACAAACAAGGTTGTTAA+AGG | - | chr2_2:49885202-49885221 | Msa0255690:three_prime_UTR | 35.0% | |
| TTGAAGATGTTTCCTCAACT+GGG | + | chr2_2:49885272-49885291 | None:intergenic | 35.0% | |
| TTTGAAGATGTTTCCTCAAC+TGG | + | chr2_2:49885273-49885292 | None:intergenic | 35.0% | |
| !!! | TGTTTTGTTGTTGTTGTAGC+TGG | - | chr2_2:49885412-49885431 | Msa0255690:intron | 35.0% |
| AGAAGATCGAGCAAGATAAT+AGG | - | chr2_2:49885494-49885513 | Msa0255690:intron | 35.0% | |
| GAGCACTTTGAACATCAAAA+TGG | + | chr2_2:49885618-49885637 | None:intergenic | 35.0% | |
| ! | AAAGTGCTCACACTATTGAA+GGG | - | chr2_2:49885629-49885648 | Msa0255690:intron | 35.0% |
| !! | GTTCTGAGGATTACTATTGT+AGG | - | chr2_2:49885701-49885720 | Msa0255690:intron | 35.0% |
| TTTGAGTATAAAGCTGCTAC+TGG | - | chr2_2:49885724-49885743 | Msa0255690:intron | 35.0% | |
| AAAAAACTCACACAGCAACA+CGG | + | chr2_2:49885765-49885784 | None:intergenic | 35.0% | |
| !! | TTGCTTTAGCCTTTCGTTTT+TGG | - | chr2_2:49885783-49885802 | Msa0255690:intron | 35.0% |
| CTTTATCAAACATCTCCCTA+GGG | + | chr2_2:49886133-49886152 | None:intergenic | 35.0% | |
| ACTTTATCAAACATCTCCCT+AGG | + | chr2_2:49886134-49886153 | None:intergenic | 35.0% | |
| ACTTTAACTGAACAAGCAGA+AGG | + | chr2_2:49886213-49886232 | None:intergenic | 35.0% | |
| ! | GTTGTTTGAAATGAAACTGC+TGG | - | chr2_2:49886336-49886355 | Msa0255690:intron | 35.0% |
| ! | GCTCAAAGTCAAGATCTTTT+AGG | + | chr2_2:49886387-49886406 | None:intergenic | 35.0% |
| ! | AGGTACACACTTCATTTTGT+AGG | - | chr2_2:49886610-49886629 | Msa0255690:intron | 35.0% |
| !! | TATGAGGCATTCTTTTGCTT+TGG | - | chr2_2:49886824-49886843 | Msa0255690:intron | 35.0% |
| TTTCTTCATTCTTGGTACCA+TGG | - | chr2_2:49886990-49887009 | Msa0255690:intron | 35.0% | |
| ATCAAGCACAAGAATTACCA+AGG | + | chr2_2:49887452-49887471 | None:intergenic | 35.0% | |
| TCAAACAGGTTATCAATAGC+GGG | + | chr2_2:49887587-49887606 | None:intergenic | 35.0% | |
| CTCAAACAGGTTATCAATAG+CGG | + | chr2_2:49887588-49887607 | None:intergenic | 35.0% | |
| !!! | ATAAGTTTTGGGAGTCTGTT+TGG | - | chr2_2:49887695-49887714 | Msa0255690:CDS | 35.0% |
| !!! | TAAGTTTTGGGAGTCTGTTT+GGG | - | chr2_2:49887696-49887715 | Msa0255690:CDS | 35.0% |
| CCACTACCAAAAGATCATTT+AGG | + | chr2_2:49887950-49887969 | None:intergenic | 35.0% | |
| ! | CCTAAATGATCTTTTGGTAG+TGG | - | chr2_2:49887947-49887966 | Msa0255690:CDS | 35.0% |
| ! | GAACAATGCTTGAATTTTGC+AGG | - | chr2_2:49888304-49888323 | Msa0255690:intron | 35.0% |
| AAAGTTGCATTTCTGCATCA+TGG | + | chr2_2:49888356-49888375 | None:intergenic | 35.0% | |
| ! | TGATGCAGAAATGCAACTTT+TGG | - | chr2_2:49888356-49888375 | Msa0255690:intron | 35.0% |
| ACACAAAATAGCTACCACAT+AGG | + | chr2_2:49888387-49888406 | None:intergenic | 35.0% | |
| TGTTGTTGTACAACTTTCAC+CGG | - | chr2_2:49888404-49888423 | Msa0255690:CDS | 35.0% | |
| !!! | TTATTTTGACAGCAAGTCTC+GGG | - | chr2_2:49888453-49888472 | Msa0255690:exon | 35.0% |
| TCAAGGTTTGATGTTATCTC+AGG | + | chr2_2:49888568-49888587 | None:intergenic | 35.0% | |
| TATGAGCGTGACGATTCATT+TGG | + | chr2_2:49884961-49884980 | None:intergenic | 40.0% | |
| TGCGTTAAGAAGAAGAACAG+AGG | + | chr2_2:49885013-49885032 | None:intergenic | 40.0% | |
| TGCTGAAATGCTAAGGTTTG+AGG | + | chr2_2:49885088-49885107 | None:intergenic | 40.0% | |
| AAAGGGTTGCTGAAATGCTA+AGG | + | chr2_2:49885095-49885114 | None:intergenic | 40.0% | |
| GAAGACAAGACCAGGAAAAA+AGG | - | chr2_2:49885156-49885175 | Msa0255690:three_prime_UTR | 40.0% | |
| AAGACCAGGAAAAAAGGACA+TGG | - | chr2_2:49885162-49885181 | Msa0255690:three_prime_UTR | 40.0% | |
| ATGGACTCATACACAATCAG+AGG | - | chr2_2:49885181-49885200 | Msa0255690:three_prime_UTR | 40.0% | |
| CACAATCAGAGGAACAAACA+AGG | - | chr2_2:49885192-49885211 | Msa0255690:three_prime_UTR | 40.0% | |
| GGGTCGGTACAAAAACAAAA+GGG | + | chr2_2:49885252-49885271 | None:intergenic | 40.0% | |
| TGGGTCGGTACAAAAACAAA+AGG | + | chr2_2:49885253-49885272 | None:intergenic | 40.0% | |
| AGACCTGAAGAATCTATTGG+TGG | - | chr2_2:49885550-49885569 | Msa0255690:intron | 40.0% | |
| CTTCCACCAATAGATTCTTC+AGG | + | chr2_2:49885556-49885575 | None:intergenic | 40.0% | |
| AAGACAGTTTCATGGAGCTA+AGG | - | chr2_2:49885576-49885595 | Msa0255690:intron | 40.0% | |
| ! | CAAAGTGCTCACACTATTGA+AGG | - | chr2_2:49885628-49885647 | Msa0255690:intron | 40.0% |
| ATTAGGTCATCCGGGTTATA+AGG | + | chr2_2:49885918-49885937 | None:intergenic | 40.0% | |
| TTATAACCCGGATGACCTAA+TGG | - | chr2_2:49885917-49885936 | Msa0255690:intron | 40.0% | |
| ! | TTTATCGTTCTTCTAGGAGC+TGG | + | chr2_2:49886092-49886111 | None:intergenic | 40.0% |
| TTGAACAAAGACTTAGCCCT+AGG | - | chr2_2:49886114-49886133 | Msa0255690:intron | 40.0% | |
| TGAACAAAGACTTAGCCCTA+GGG | - | chr2_2:49886115-49886134 | Msa0255690:intron | 40.0% | |
| AATGCTGGAAATAGGGAACA+TGG | - | chr2_2:49886243-49886262 | Msa0255690:intron | 40.0% | |
| ATGCTGGAAATAGGGAACAT+GGG | - | chr2_2:49886244-49886263 | Msa0255690:intron | 40.0% | |
| CGATGATTTGAAGAAACCAC+AGG | - | chr2_2:49886724-49886743 | Msa0255690:intron | 40.0% | |
| TGATTTGAAGAAACCACAGG+CGG | - | chr2_2:49886727-49886746 | Msa0255690:intron | 40.0% | |
| TTTGCTTTGGCCCTTTGATA+CGG | - | chr2_2:49886837-49886856 | Msa0255690:intron | 40.0% | |
| !! | AAAACGGATTACGCTAACCA+TGG | + | chr2_2:49887010-49887029 | None:intergenic | 40.0% |
| ATAACATATATGGCCCCAAC+CGG | - | chr2_2:49887333-49887352 | Msa0255690:intron | 40.0% | |
| GCATTTGACTGCAGATCAAA+AGG | + | chr2_2:49887374-49887393 | None:intergenic | 40.0% | |
| AATGCTCTACTACTGAGCTA+TGG | - | chr2_2:49887389-49887408 | Msa0255690:intron | 40.0% | |
| TTAATATCTAGGGGCCTGTT+TGG | - | chr2_2:49887642-49887661 | Msa0255690:intron | 40.0% | |
| ! | CAATGCTTGAATTTTGCAGG+TGG | - | chr2_2:49888307-49888326 | Msa0255690:intron | 40.0% |
| ! | TGCAGAAATGCAACTTTTGG+TGG | - | chr2_2:49888359-49888378 | Msa0255690:intron | 40.0% |
| TTGTACAACTTTCACCGGAT+TGG | - | chr2_2:49888409-49888428 | Msa0255690:CDS | 40.0% | |
| AGAAGAACAGAGGAACCCTA+AGG | + | chr2_2:49885003-49885022 | None:intergenic | 45.0% | |
| GAGAGACTCAAACACACACA+TGG | - | chr2_2:49885132-49885151 | Msa0255690:three_prime_UTR | 45.0% | |
| !!! | GAGTCCATGTCCTTTTTTCC+TGG | + | chr2_2:49885169-49885188 | None:intergenic | 45.0% |
| !! | TTTTTGTACCGACCCAGTTG+AGG | - | chr2_2:49885257-49885276 | Msa0255690:exon | 45.0% |
| AGATGTTTCCTCAACTGGGT+CGG | + | chr2_2:49885268-49885287 | None:intergenic | 45.0% | |
| GGTGGAAGAAGACAGTTTCA+TGG | - | chr2_2:49885568-49885587 | Msa0255690:intron | 45.0% | |
| GCTTGAGAATGTAGGTTCTG+AGG | - | chr2_2:49885687-49885706 | Msa0255690:intron | 45.0% | |
| ATGCGAGATGCCTTATAACC+CGG | - | chr2_2:49885905-49885924 | Msa0255690:intron | 45.0% | |
| ACCTAATGGTGCAGTGTGAA+GGG | - | chr2_2:49885931-49885950 | Msa0255690:intron | 45.0% | |
| CTGTTATTGGAACTCTGTCC+CGG | - | chr2_2:49886175-49886194 | Msa0255690:intron | 45.0% | |
| CTATCAGATCCTGGTGATAC+AGG | + | chr2_2:49886758-49886777 | None:intergenic | 45.0% | |
| ATCACCAGGATCTGATAGCA+AGG | - | chr2_2:49886760-49886779 | Msa0255690:intron | 45.0% | |
| TTGCTTTGGCCCTTTGATAC+GGG | - | chr2_2:49886838-49886857 | Msa0255690:intron | 45.0% | |
| CTGTGATAGCCCGTATCAAA+GGG | + | chr2_2:49886850-49886869 | None:intergenic | 45.0% | |
| TCTGTGATAGCCCGTATCAA+AGG | + | chr2_2:49886851-49886870 | None:intergenic | 45.0% | |
| TAACATATATGGCCCCAACC+GGG | - | chr2_2:49887334-49887353 | Msa0255690:intron | 45.0% | |
| ! | AGATCAAAAGGTCACCGGTT+CGG | + | chr2_2:49887362-49887381 | None:intergenic | 45.0% |
| ACTGCAGATCAAAAGGTCAC+CGG | + | chr2_2:49887367-49887386 | None:intergenic | 45.0% | |
| !!! | AACTTTTGGTGGTGCCTATG+TGG | - | chr2_2:49888370-49888389 | Msa0255690:intron | 45.0% |
| TTCTCCACACGTGCCACATA+GGG | + | chr2_2:49885478-49885497 | None:intergenic | 50.0% | |
| ATGTGAGGGTTCGTGTGAGA+TGG | - | chr2_2:49885521-49885540 | Msa0255690:intron | 50.0% | |
| ACTGCACCATTAGGTCATCC+GGG | + | chr2_2:49885926-49885945 | None:intergenic | 50.0% | |
| CACTGCACCATTAGGTCATC+CGG | + | chr2_2:49885927-49885946 | None:intergenic | 50.0% | |
| GACCTAATGGTGCAGTGTGA+AGG | - | chr2_2:49885930-49885949 | Msa0255690:intron | 50.0% | |
| ACCCTTCACACTGCACCATT+AGG | + | chr2_2:49885935-49885954 | None:intergenic | 50.0% | |
| ! | AGTGTGAAGGGTGCAAGGAT+TGG | - | chr2_2:49885943-49885962 | Msa0255690:intron | 50.0% |
| ! | CAAGCAGAAGGCTTTGTCCT+AGG | + | chr2_2:49886201-49886220 | None:intergenic | 50.0% |
| TAGGTACCATCCTGCTTGTG+TGG | - | chr2_2:49886640-49886659 | Msa0255690:intron | 50.0% | |
| AGGTACCATCCTGCTTGTGT+GGG | - | chr2_2:49886641-49886660 | Msa0255690:intron | 50.0% | |
| ATAGTCATGCCCACACAAGC+AGG | + | chr2_2:49886653-49886672 | None:intergenic | 50.0% | |
| ! | CTCACCTTGCTATCAGATCC+TGG | + | chr2_2:49886767-49886786 | None:intergenic | 50.0% |
| ATCTAGGGGCCTGTTTGGAT+TGG | - | chr2_2:49887647-49887666 | Msa0255690:intron | 50.0% | |
| CACATGGCGAAGACAAGACC+AGG | - | chr2_2:49885148-49885167 | Msa0255690:three_prime_UTR | 55.0% | |
| GGTGGCTTACTCGTGTCAGA+AGG | + | chr2_2:49885457-49885476 | None:intergenic | 55.0% | |
| CACGAGTAAGCCACCCTATG+TGG | - | chr2_2:49885462-49885481 | Msa0255690:intron | 55.0% | |
| CTTCTCCACACGTGCCACAT+AGG | + | chr2_2:49885479-49885498 | None:intergenic | 55.0% | |
| ACTCACACAGCAACACGGTC+AGG | + | chr2_2:49885760-49885779 | None:intergenic | 55.0% | |
| ! | AGAAGGCTTTGTCCTAGGCC+GGG | + | chr2_2:49886196-49886215 | None:intergenic | 55.0% |
| ! | CAGAAGGCTTTGTCCTAGGC+CGG | + | chr2_2:49886197-49886216 | None:intergenic | 55.0% |
| TCATGCCCACACAAGCAGGA+TGG | + | chr2_2:49886649-49886668 | None:intergenic | 55.0% | |
| ! | TTTTGCAGGTGGAGCCGAAG+CGG | - | chr2_2:49888318-49888337 | Msa0255690:intron | 55.0% |
| TCCACACGTGCCACATAGGG+TGG | + | chr2_2:49885475-49885494 | None:intergenic | 60.0% | |
| ! | GGTGCAGTGTGAAGGGTGCA+AGG | - | chr2_2:49885938-49885957 | Msa0255690:intron | 60.0% |
| TTGGAACTCTGTCCCGGCCT+AGG | - | chr2_2:49886181-49886200 | Msa0255690:intron | 60.0% | |
| GATACAGGAAACGCCGCCTG+TGG | + | chr2_2:49886743-49886762 | None:intergenic | 60.0% | |
| GCGGCGTTTCCTGTATCACC+AGG | - | chr2_2:49886746-49886765 | Msa0255690:intron | 60.0% | |
| !! | AAGGTCACCGGTTCGGAACC+CGG | + | chr2_2:49887355-49887374 | None:intergenic | 60.0% |
| GGTCCTCTCTTTCGCCGCTT+CGG | + | chr2_2:49888335-49888354 | None:intergenic | 60.0% | |
| GCCACCCTATGTGGCACGTG+TGG | - | chr2_2:49885471-49885490 | Msa0255690:intron | 65.0% | |
| !! | ACCGGTTCGGAACCCGGTTG+GGG | + | chr2_2:49887349-49887368 | None:intergenic | 65.0% |
| !! | CACCGGTTCGGAACCCGGTT+GGG | + | chr2_2:49887350-49887369 | None:intergenic | 65.0% |
| !! | TCACCGGTTCGGAACCCGGT+TGG | + | chr2_2:49887351-49887370 | None:intergenic | 65.0% |
| GAGCCGAAGCGGCGAAAGAG+AGG | - | chr2_2:49888329-49888348 | Msa0255690:intron | 65.0% | |
| GCCCCAACCGGGTTCCGAAC+CGG | - | chr2_2:49887345-49887364 | Msa0255690:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 49884957 | 49888664 | 49884957 | ID=Msa0255690;Name=Msa0255690 |
| chr2_2 | mRNA | 49884957 | 49888664 | 49884957 | ID=Msa0255690-mRNA-1;Parent=Msa0255690;Name=Msa0255690-mRNA-1;_AED=0.01;_eAED=0.01;_QI=194|1|1|1|1|1|5|306|218 |
| chr2_2 | exon | 49884957 | 49885295 | 49884957 | ID=Msa0255690-mRNA-1:exon:14998;Parent=Msa0255690-mRNA-1 |
| chr2_2 | exon | 49886840 | 49886978 | 49886840 | ID=Msa0255690-mRNA-1:exon:14997;Parent=Msa0255690-mRNA-1 |
| chr2_2 | exon | 49887657 | 49887725 | 49887657 | ID=Msa0255690-mRNA-1:exon:14996;Parent=Msa0255690-mRNA-1 |
| chr2_2 | exon | 49887848 | 49888190 | 49887848 | ID=Msa0255690-mRNA-1:exon:14995;Parent=Msa0255690-mRNA-1 |
| chr2_2 | exon | 49888398 | 49888664 | 49888398 | ID=Msa0255690-mRNA-1:exon:14994;Parent=Msa0255690-mRNA-1 |
| chr2_2 | five_prime_UTR | 49888471 | 49888664 | 49888471 | ID=Msa0255690-mRNA-1:five_prime_utr;Parent=Msa0255690-mRNA-1 |
| chr2_2 | CDS | 49888398 | 49888470 | 49888398 | ID=Msa0255690-mRNA-1:cds;Parent=Msa0255690-mRNA-1 |
| chr2_2 | CDS | 49887848 | 49888190 | 49887848 | ID=Msa0255690-mRNA-1:cds;Parent=Msa0255690-mRNA-1 |
| chr2_2 | CDS | 49887657 | 49887725 | 49887657 | ID=Msa0255690-mRNA-1:cds;Parent=Msa0255690-mRNA-1 |
| chr2_2 | CDS | 49886840 | 49886978 | 49886840 | ID=Msa0255690-mRNA-1:cds;Parent=Msa0255690-mRNA-1 |
| chr2_2 | CDS | 49885263 | 49885295 | 49885263 | ID=Msa0255690-mRNA-1:cds;Parent=Msa0255690-mRNA-1 |
| chr2_2 | three_prime_UTR | 49884957 | 49885262 | 49884957 | ID=Msa0255690-mRNA-1:three_prime_utr;Parent=Msa0255690-mRNA-1 |
| Gene Sequence |
| Protein sequence |
