Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84863.t1 | XP_003627536.2 | 99.6 | 232 | 1 | 0 | 1 | 232 | 1 | 232 | 2.50E-123 | 451.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84863.t1 | Q9LNK1 | 73.1 | 234 | 59 | 3 | 2 | 232 | 5 | 237 | 2.1e-86 | 320.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84863.t1 | G7LAV3 | 99.6 | 232 | 1 | 0 | 1 | 232 | 1 | 232 | 1.8e-123 | 451.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049418 | MS.gene84863 | 0.823475 | 1.36E-53 | -1.69E-46 |
MS.gene051021 | MS.gene84863 | 0.848049 | 7.85E-60 | -1.69E-46 |
MS.gene051478 | MS.gene84863 | 0.815131 | 1.08E-51 | -1.69E-46 |
MS.gene051648 | MS.gene84863 | 0.804725 | 1.88E-49 | -1.69E-46 |
MS.gene051719 | MS.gene84863 | 0.807538 | 4.81E-50 | -1.69E-46 |
MS.gene051720 | MS.gene84863 | 0.819039 | 1.43E-52 | -1.69E-46 |
MS.gene052151 | MS.gene84863 | 0.803894 | 2.80E-49 | -1.69E-46 |
MS.gene052732 | MS.gene84863 | 0.825355 | 4.90E-54 | -1.69E-46 |
MS.gene053144 | MS.gene84863 | 0.839021 | 2.03E-57 | -1.69E-46 |
MS.gene053174 | MS.gene84863 | 0.80051 | 1.39E-48 | -1.69E-46 |
MS.gene053581 | MS.gene84863 | 0.80998 | 1.45E-50 | -1.69E-46 |
MS.gene054550 | MS.gene84863 | 0.812829 | 3.48E-51 | -1.69E-46 |
MS.gene054584 | MS.gene84863 | 0.846099 | 2.69E-59 | -1.69E-46 |
MS.gene055537 | MS.gene84863 | 0.856359 | 3.39E-62 | -1.69E-46 |
MS.gene057004 | MS.gene84863 | 0.823233 | 1.55E-53 | -1.69E-46 |
MS.gene057082 | MS.gene84863 | 0.803837 | 2.88E-49 | -1.69E-46 |
MS.gene05894 | MS.gene84863 | 0.810585 | 1.07E-50 | -1.69E-46 |
MS.gene060519 | MS.gene84863 | 0.882246 | 1.22E-70 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84863.t1 | MTR_8g027220 | 99.569 | 232 | 1 | 0 | 1 | 232 | 1 | 232 | 3.46e-171 | 470 |
MS.gene84863.t1 | MTR_7g117910 | 70.561 | 214 | 45 | 2 | 21 | 232 | 15 | 212 | 5.28e-104 | 300 |
MS.gene84863.t1 | MTR_8g089985 | 66.986 | 209 | 64 | 2 | 18 | 222 | 9 | 216 | 2.47e-97 | 283 |
MS.gene84863.t1 | MTR_3g086980 | 64.977 | 217 | 68 | 2 | 18 | 230 | 8 | 220 | 2.30e-96 | 281 |
MS.gene84863.t1 | MTR_1g052475 | 66.832 | 202 | 60 | 2 | 18 | 213 | 7 | 207 | 8.35e-94 | 274 |
MS.gene84863.t1 | MTR_0262s0050 | 66.500 | 200 | 63 | 1 | 18 | 213 | 7 | 206 | 1.25e-91 | 269 |
MS.gene84863.t1 | MTR_2g014990 | 58.333 | 216 | 88 | 1 | 17 | 232 | 4 | 217 | 6.14e-88 | 259 |
MS.gene84863.t1 | MTR_4g088090 | 57.407 | 216 | 90 | 1 | 17 | 232 | 4 | 217 | 2.81e-87 | 257 |
MS.gene84863.t1 | MTR_2g005510 | 61.692 | 201 | 75 | 1 | 20 | 218 | 9 | 209 | 4.00e-86 | 254 |
MS.gene84863.t1 | MTR_4g079350 | 56.019 | 216 | 93 | 1 | 17 | 232 | 4 | 217 | 1.83e-85 | 253 |
MS.gene84863.t1 | MTR_4g064897 | 61.458 | 192 | 74 | 0 | 17 | 208 | 3 | 194 | 3.44e-85 | 252 |
MS.gene84863.t1 | MTR_2g075950 | 56.422 | 218 | 87 | 3 | 17 | 231 | 4 | 216 | 7.66e-84 | 249 |
MS.gene84863.t1 | MTR_3g069510 | 56.164 | 219 | 86 | 2 | 17 | 231 | 3 | 215 | 9.63e-84 | 248 |
MS.gene84863.t1 | MTR_2g083860 | 55.349 | 215 | 95 | 1 | 17 | 231 | 4 | 217 | 2.47e-82 | 245 |
MS.gene84863.t1 | MTR_2g090865 | 55.140 | 214 | 93 | 1 | 19 | 232 | 4 | 214 | 3.87e-81 | 242 |
MS.gene84863.t1 | MTR_8g036220 | 54.378 | 217 | 92 | 2 | 20 | 230 | 10 | 225 | 2.43e-79 | 238 |
MS.gene84863.t1 | MTR_1g078200 | 59.239 | 184 | 74 | 1 | 20 | 202 | 7 | 190 | 4.34e-76 | 229 |
MS.gene84863.t1 | MTR_7g405790 | 51.456 | 206 | 99 | 1 | 25 | 230 | 14 | 218 | 3.22e-72 | 219 |
MS.gene84863.t1 | MTR_6g079550 | 49.309 | 217 | 100 | 2 | 19 | 231 | 5 | 215 | 2.29e-70 | 214 |
MS.gene84863.t1 | MTR_7g051940 | 51.456 | 206 | 96 | 2 | 25 | 230 | 12 | 213 | 6.40e-70 | 213 |
MS.gene84863.t1 | MTR_8g107070 | 54.444 | 180 | 82 | 0 | 19 | 198 | 7 | 186 | 4.75e-64 | 200 |
MS.gene84863.t1 | MTR_8g031870 | 52.147 | 163 | 78 | 0 | 25 | 187 | 5 | 167 | 1.06e-58 | 184 |
MS.gene84863.t1 | MTR_2g027660 | 53.797 | 158 | 73 | 0 | 25 | 182 | 5 | 162 | 2.70e-57 | 181 |
MS.gene84863.t1 | MTR_8g031660 | 51.534 | 163 | 79 | 0 | 25 | 187 | 5 | 167 | 3.81e-56 | 178 |
MS.gene84863.t1 | MTR_6g021790 | 51.220 | 164 | 80 | 0 | 24 | 187 | 4 | 167 | 4.46e-56 | 178 |
MS.gene84863.t1 | MTR_2g005500 | 46.032 | 189 | 101 | 1 | 24 | 211 | 7 | 195 | 1.22e-54 | 174 |
MS.gene84863.t1 | MTR_8g031680 | 49.080 | 163 | 83 | 0 | 25 | 187 | 5 | 167 | 6.12e-54 | 172 |
MS.gene84863.t1 | MTR_8g006970 | 49.112 | 169 | 86 | 0 | 19 | 187 | 1 | 169 | 2.54e-53 | 170 |
MS.gene84863.t1 | MTR_7g081700 | 42.424 | 198 | 114 | 0 | 19 | 216 | 1 | 198 | 2.72e-53 | 171 |
MS.gene84863.t1 | MTR_8g006970 | 44.330 | 194 | 107 | 1 | 24 | 216 | 20 | 213 | 3.61e-53 | 171 |
MS.gene84863.t1 | MTR_8g031830 | 47.904 | 167 | 86 | 1 | 25 | 190 | 5 | 171 | 3.06e-52 | 167 |
MS.gene84863.t1 | MTR_1g068740 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 8.73e-51 | 164 |
MS.gene84863.t1 | MTR_7g100020 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 1.52e-50 | 164 |
MS.gene84863.t1 | MTR_1g115325 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 1.85e-50 | 164 |
MS.gene84863.t1 | MTR_1g068730 | 46.061 | 165 | 88 | 1 | 24 | 187 | 13 | 177 | 2.97e-50 | 163 |
MS.gene84863.t1 | MTR_8g093740 | 44.706 | 170 | 91 | 3 | 20 | 187 | 7 | 175 | 8.45e-46 | 152 |
MS.gene84863.t1 | MTR_3g064390 | 41.899 | 179 | 99 | 1 | 28 | 206 | 12 | 185 | 9.66e-46 | 151 |
MS.gene84863.t1 | MTR_2g096550 | 42.353 | 170 | 96 | 2 | 20 | 187 | 9 | 178 | 1.11e-45 | 151 |
MS.gene84863.t1 | MTR_5g076590 | 41.899 | 179 | 99 | 1 | 28 | 206 | 12 | 185 | 1.52e-45 | 150 |
MS.gene84863.t1 | MTR_1g029450 | 46.429 | 168 | 87 | 3 | 22 | 187 | 13 | 179 | 1.54e-45 | 151 |
MS.gene84863.t1 | MTR_4g063160 | 44.910 | 167 | 89 | 2 | 24 | 187 | 13 | 179 | 1.79e-45 | 151 |
MS.gene84863.t1 | MTR_4g099470 | 43.750 | 160 | 90 | 0 | 57 | 216 | 15 | 174 | 6.14e-45 | 148 |
MS.gene84863.t1 | MTR_3g096350 | 43.429 | 175 | 96 | 3 | 15 | 187 | 1 | 174 | 9.86e-44 | 146 |
MS.gene84863.t1 | MTR_1g094220 | 44.118 | 170 | 90 | 2 | 28 | 196 | 33 | 198 | 1.18e-43 | 145 |
MS.gene84863.t1 | MTR_1g094220 | 44.643 | 168 | 88 | 2 | 28 | 194 | 33 | 196 | 6.25e-43 | 144 |
MS.gene84863.t1 | MTR_1g094220 | 46.753 | 154 | 81 | 1 | 28 | 180 | 33 | 186 | 1.26e-42 | 143 |
MS.gene84863.t1 | MTR_3g087160 | 42.038 | 157 | 91 | 0 | 27 | 183 | 10 | 166 | 1.46e-42 | 143 |
MS.gene84863.t1 | MTR_1g094220 | 46.753 | 154 | 81 | 1 | 28 | 180 | 33 | 186 | 3.29e-42 | 143 |
MS.gene84863.t1 | MTR_1g068740 | 48.462 | 130 | 66 | 1 | 24 | 152 | 13 | 142 | 6.47e-42 | 141 |
MS.gene84863.t1 | MTR_5g013900 | 34.951 | 206 | 126 | 1 | 27 | 232 | 10 | 207 | 9.39e-42 | 141 |
MS.gene84863.t1 | MTR_8g103550 | 42.500 | 160 | 92 | 0 | 28 | 187 | 11 | 170 | 1.07e-41 | 140 |
MS.gene84863.t1 | MTR_1g068730 | 50.000 | 120 | 60 | 0 | 24 | 143 | 13 | 132 | 1.26e-41 | 140 |
MS.gene84863.t1 | MTR_7g103070 | 45.679 | 162 | 86 | 2 | 24 | 183 | 14 | 175 | 1.47e-41 | 141 |
MS.gene84863.t1 | MTR_8g090215 | 41.401 | 157 | 92 | 0 | 27 | 183 | 10 | 166 | 2.35e-41 | 140 |
MS.gene84863.t1 | MTR_2g102060 | 39.444 | 180 | 103 | 1 | 28 | 207 | 12 | 185 | 3.03e-41 | 140 |
MS.gene84863.t1 | MTR_4g098950 | 38.854 | 157 | 96 | 0 | 27 | 183 | 10 | 166 | 1.68e-40 | 138 |
MS.gene84863.t1 | MTR_1g062760 | 44.444 | 171 | 92 | 3 | 24 | 192 | 12 | 181 | 3.93e-40 | 137 |
MS.gene84863.t1 | MTR_1g090717 | 44.186 | 172 | 93 | 3 | 24 | 192 | 13 | 184 | 1.27e-36 | 128 |
MS.gene84863.t1 | MTR_3g096350 | 43.537 | 147 | 77 | 4 | 15 | 159 | 1 | 143 | 2.41e-36 | 125 |
MS.gene84863.t1 | MTR_3g064390 | 45.312 | 128 | 70 | 0 | 28 | 155 | 12 | 139 | 3.25e-35 | 123 |
MS.gene84863.t1 | MTR_3g096350 | 46.212 | 132 | 68 | 3 | 15 | 144 | 1 | 131 | 1.12e-34 | 121 |
MS.gene84863.t1 | MTR_8g093740 | 45.113 | 133 | 71 | 2 | 57 | 187 | 10 | 142 | 7.13e-34 | 120 |
MS.gene84863.t1 | MTR_4g069850 | 33.937 | 221 | 124 | 6 | 19 | 232 | 1 | 206 | 1.34e-32 | 117 |
MS.gene84863.t1 | MTR_8g092020 | 34.579 | 214 | 117 | 6 | 26 | 232 | 12 | 209 | 5.41e-32 | 116 |
MS.gene84863.t1 | MTR_1g097420 | 37.423 | 163 | 95 | 3 | 26 | 181 | 8 | 170 | 1.02e-30 | 113 |
MS.gene84863.t1 | MTR_2g101890 | 37.654 | 162 | 94 | 3 | 26 | 180 | 10 | 171 | 4.26e-30 | 111 |
MS.gene84863.t1 | MTR_4g012940 | 33.032 | 221 | 127 | 6 | 19 | 232 | 1 | 207 | 8.18e-30 | 110 |
MS.gene84863.t1 | MTR_7g103070 | 46.610 | 118 | 61 | 2 | 68 | 183 | 2 | 119 | 4.81e-29 | 107 |
MS.gene84863.t1 | MTR_6g039490 | 35.583 | 163 | 98 | 3 | 26 | 181 | 8 | 170 | 1.10e-27 | 105 |
MS.gene84863.t1 | MTR_2g005500 | 33.333 | 189 | 85 | 2 | 24 | 211 | 7 | 155 | 1.58e-25 | 98.2 |
MS.gene84863.t1 | MTR_1g097420 | 34.545 | 165 | 99 | 4 | 24 | 181 | 35 | 197 | 1.68e-25 | 100 |
MS.gene84863.t1 | MTR_8g031810 | 43.269 | 104 | 45 | 1 | 25 | 128 | 5 | 94 | 5.52e-23 | 89.7 |
MS.gene84863.t1 | MTR_3g107717 | 30.198 | 202 | 134 | 5 | 20 | 220 | 6 | 201 | 1.37e-21 | 89.4 |
MS.gene84863.t1 | MTR_3g107713 | 33.136 | 169 | 109 | 4 | 20 | 187 | 6 | 171 | 1.38e-21 | 89.4 |
MS.gene84863.t1 | MTR_3g107707 | 33.136 | 169 | 109 | 4 | 20 | 187 | 6 | 171 | 1.44e-21 | 89.4 |
MS.gene84863.t1 | MTR_1g069245 | 35.570 | 149 | 71 | 3 | 6 | 133 | 55 | 199 | 3.28e-20 | 85.9 |
MS.gene84863.t1 | MTR_4g073250 | 39.496 | 119 | 69 | 3 | 28 | 145 | 8 | 124 | 3.96e-20 | 85.1 |
MS.gene84863.t1 | MTR_4g088055 | 38.655 | 119 | 70 | 3 | 28 | 145 | 8 | 124 | 4.17e-20 | 85.1 |
MS.gene84863.t1 | MTR_5g022600 | 38.655 | 119 | 70 | 3 | 28 | 145 | 8 | 124 | 4.59e-20 | 84.7 |
MS.gene84863.t1 | MTR_2g090875 | 33.939 | 165 | 95 | 5 | 28 | 180 | 8 | 170 | 4.88e-20 | 84.7 |
MS.gene84863.t1 | MTR_3g078260 | 35.758 | 165 | 92 | 6 | 28 | 180 | 10 | 172 | 9.39e-20 | 84.3 |
MS.gene84863.t1 | MTR_8g075240 | 31.522 | 184 | 97 | 7 | 28 | 204 | 8 | 169 | 1.02e-19 | 84.0 |
MS.gene84863.t1 | MTR_6g087980 | 31.604 | 212 | 116 | 8 | 28 | 232 | 8 | 197 | 1.47e-19 | 84.0 |
MS.gene84863.t1 | MTR_2g078000 | 61.224 | 49 | 19 | 0 | 87 | 135 | 46 | 94 | 1.34e-17 | 75.9 |
MS.gene84863.t1 | MTR_1452s0010 | 46.377 | 69 | 37 | 0 | 56 | 124 | 11 | 79 | 6.08e-17 | 73.9 |
MS.gene84863.t1 | MTR_3g078260 | 36.842 | 114 | 69 | 3 | 28 | 140 | 10 | 121 | 2.59e-16 | 73.6 |
MS.gene84863.t1 | MTR_4g113620 | 29.630 | 162 | 102 | 5 | 26 | 187 | 13 | 162 | 1.24e-14 | 70.5 |
MS.gene84863.t1 | MTR_1g059590 | 32.335 | 167 | 106 | 3 | 29 | 195 | 398 | 557 | 1.61e-14 | 72.4 |
MS.gene84863.t1 | MTR_1g059590 | 32.335 | 167 | 106 | 3 | 29 | 195 | 431 | 590 | 1.87e-14 | 72.4 |
MS.gene84863.t1 | MTR_1686s0010 | 36.905 | 84 | 53 | 0 | 54 | 137 | 9 | 92 | 3.47e-14 | 66.2 |
MS.gene84863.t1 | MTR_3g053480 | 51.667 | 60 | 26 | 1 | 12 | 71 | 5 | 61 | 7.15e-14 | 64.7 |
MS.gene84863.t1 | MTR_8g099250 | 54.386 | 57 | 23 | 1 | 12 | 68 | 5 | 58 | 1.18e-13 | 64.3 |
MS.gene84863.t1 | MTR_2g078560 | 56.522 | 46 | 20 | 0 | 88 | 133 | 54 | 99 | 1.19e-12 | 66.6 |
MS.gene84863.t1 | MTR_5g092060 | 27.322 | 183 | 118 | 5 | 5 | 180 | 88 | 262 | 6.63e-11 | 61.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene84863.t1 | AT1G01200 | 73.077 | 234 | 59 | 3 | 2 | 232 | 5 | 237 | 1.83e-118 | 337 |
MS.gene84863.t1 | AT5G65270 | 66.019 | 206 | 62 | 2 | 18 | 217 | 9 | 212 | 2.38e-97 | 283 |
MS.gene84863.t1 | AT5G47960 | 67.453 | 212 | 63 | 3 | 14 | 220 | 3 | 213 | 1.30e-95 | 279 |
MS.gene84863.t1 | AT3G12160 | 66.667 | 207 | 61 | 2 | 18 | 218 | 7 | 211 | 2.10e-95 | 278 |
MS.gene84863.t1 | AT4G39990 | 64.151 | 212 | 69 | 4 | 22 | 230 | 13 | 220 | 1.12e-92 | 271 |
MS.gene84863.t1 | AT4G18800 | 58.796 | 216 | 82 | 2 | 17 | 231 | 4 | 213 | 2.69e-87 | 257 |
MS.gene84863.t1 | AT5G60860 | 56.744 | 215 | 91 | 1 | 17 | 231 | 4 | 216 | 1.62e-86 | 256 |
MS.gene84863.t1 | AT3G15060 | 56.279 | 215 | 92 | 1 | 17 | 231 | 4 | 216 | 1.59e-85 | 253 |
MS.gene84863.t1 | AT1G16920 | 57.407 | 216 | 87 | 2 | 17 | 231 | 4 | 215 | 4.11e-85 | 252 |
MS.gene84863.t1 | AT1G09630 | 59.204 | 201 | 80 | 1 | 20 | 218 | 6 | 206 | 5.96e-85 | 251 |
MS.gene84863.t1 | AT1G28550 | 57.143 | 217 | 90 | 2 | 17 | 232 | 4 | 218 | 1.20e-84 | 251 |
MS.gene84863.t1 | AT5G45750 | 56.944 | 216 | 88 | 2 | 17 | 231 | 4 | 215 | 1.35e-84 | 251 |
MS.gene84863.t1 | AT1G07410 | 59.799 | 199 | 73 | 2 | 19 | 213 | 5 | 200 | 5.29e-84 | 249 |
MS.gene84863.t1 | AT2G33870 | 55.300 | 217 | 94 | 2 | 17 | 232 | 4 | 218 | 6.04e-84 | 249 |
MS.gene84863.t1 | AT5G59150 | 65.169 | 178 | 62 | 0 | 17 | 194 | 3 | 180 | 5.14e-83 | 247 |
MS.gene84863.t1 | AT4G18430 | 54.884 | 215 | 95 | 1 | 17 | 231 | 4 | 216 | 2.76e-82 | 245 |
MS.gene84863.t1 | AT3G46830 | 63.889 | 180 | 65 | 0 | 15 | 194 | 1 | 180 | 2.86e-82 | 245 |
MS.gene84863.t1 | AT3G46830 | 63.889 | 180 | 65 | 0 | 15 | 194 | 1 | 180 | 2.86e-82 | 245 |
MS.gene84863.t1 | AT1G06400 | 53.704 | 216 | 95 | 2 | 17 | 231 | 4 | 215 | 4.63e-80 | 239 |
MS.gene84863.t1 | AT5G47520 | 60.694 | 173 | 68 | 0 | 24 | 196 | 12 | 184 | 1.61e-74 | 225 |
MS.gene84863.t1 | AT1G05810 | 53.807 | 197 | 91 | 0 | 6 | 202 | 38 | 234 | 6.26e-73 | 223 |
MS.gene84863.t1 | AT1G05810 | 56.216 | 185 | 81 | 0 | 18 | 202 | 4 | 188 | 3.65e-72 | 219 |
MS.gene84863.t1 | AT1G73640 | 59.429 | 175 | 71 | 0 | 20 | 194 | 7 | 181 | 1.89e-71 | 218 |
MS.gene84863.t1 | AT2G43130 | 54.595 | 185 | 84 | 0 | 18 | 202 | 4 | 188 | 2.19e-71 | 217 |
MS.gene84863.t1 | AT3G07410 | 52.404 | 208 | 98 | 1 | 24 | 231 | 10 | 216 | 2.49e-71 | 217 |
MS.gene84863.t1 | AT2G31680 | 55.307 | 179 | 80 | 0 | 24 | 202 | 10 | 188 | 2.83e-70 | 214 |
MS.gene84863.t1 | AT1G18200 | 56.000 | 175 | 77 | 0 | 20 | 194 | 7 | 181 | 2.54e-67 | 207 |
MS.gene84863.t1 | AT4G35860 | 49.180 | 183 | 89 | 1 | 24 | 202 | 4 | 186 | 6.11e-58 | 182 |
MS.gene84863.t1 | AT4G17170 | 49.432 | 176 | 89 | 0 | 25 | 200 | 5 | 180 | 1.51e-57 | 182 |
MS.gene84863.t1 | AT4G17160 | 48.333 | 180 | 93 | 0 | 25 | 204 | 5 | 184 | 2.05e-56 | 179 |
MS.gene84863.t1 | AT1G02130 | 44.330 | 194 | 107 | 1 | 19 | 211 | 1 | 194 | 5.77e-55 | 175 |
MS.gene84863.t1 | AT5G47200 | 42.424 | 198 | 114 | 0 | 19 | 216 | 1 | 198 | 4.65e-54 | 172 |
MS.gene84863.t1 | AT5G59150 | 63.780 | 127 | 46 | 0 | 68 | 194 | 3 | 129 | 4.92e-54 | 171 |
MS.gene84863.t1 | AT4G17530 | 42.424 | 198 | 114 | 0 | 19 | 216 | 1 | 198 | 1.42e-53 | 171 |
MS.gene84863.t1 | AT3G11730 | 47.337 | 169 | 89 | 0 | 19 | 187 | 1 | 169 | 3.68e-53 | 170 |
MS.gene84863.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 2.62e-50 | 163 |
MS.gene84863.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 2.62e-50 | 163 |
MS.gene84863.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 24 | 187 | 13 | 177 | 2.62e-50 | 163 |
MS.gene84863.t1 | AT3G46060 | 45.882 | 170 | 91 | 1 | 24 | 192 | 13 | 182 | 3.04e-50 | 163 |
MS.gene84863.t1 | AT3G46060 | 45.882 | 170 | 91 | 1 | 24 | 192 | 13 | 182 | 3.04e-50 | 163 |
MS.gene84863.t1 | AT3G46060 | 45.882 | 170 | 91 | 1 | 24 | 192 | 13 | 182 | 3.04e-50 | 163 |
MS.gene84863.t1 | AT5G59840 | 46.061 | 165 | 88 | 1 | 24 | 187 | 13 | 177 | 1.10e-49 | 162 |
MS.gene84863.t1 | AT3G09900 | 47.879 | 165 | 85 | 1 | 24 | 187 | 13 | 177 | 6.08e-49 | 160 |
MS.gene84863.t1 | AT5G03520 | 47.273 | 165 | 86 | 1 | 24 | 187 | 13 | 177 | 6.74e-49 | 160 |
MS.gene84863.t1 | AT4G19640 | 41.081 | 185 | 104 | 1 | 28 | 212 | 12 | 191 | 2.40e-48 | 158 |
MS.gene84863.t1 | AT3G54840 | 47.337 | 169 | 84 | 2 | 28 | 195 | 35 | 199 | 4.45e-47 | 155 |
MS.gene84863.t1 | AT3G54840 | 47.024 | 168 | 84 | 2 | 29 | 195 | 2 | 165 | 9.38e-47 | 153 |
MS.gene84863.t1 | AT5G45130 | 43.558 | 163 | 92 | 0 | 28 | 190 | 12 | 174 | 2.22e-46 | 153 |
MS.gene84863.t1 | AT3G54840 | 49.351 | 154 | 77 | 1 | 28 | 180 | 35 | 188 | 5.82e-46 | 151 |
MS.gene84863.t1 | AT5G45130 | 43.478 | 161 | 91 | 0 | 30 | 190 | 22 | 182 | 3.98e-45 | 150 |
MS.gene84863.t1 | AT1G43890 | 45.882 | 170 | 89 | 3 | 20 | 187 | 7 | 175 | 3.96e-44 | 147 |
MS.gene84863.t1 | AT1G43890 | 45.882 | 170 | 89 | 3 | 20 | 187 | 7 | 175 | 3.96e-44 | 147 |
MS.gene84863.t1 | AT1G43890 | 45.882 | 170 | 89 | 3 | 20 | 187 | 7 | 175 | 3.96e-44 | 147 |
MS.gene84863.t1 | AT4G35860 | 50.360 | 139 | 65 | 1 | 68 | 202 | 2 | 140 | 9.86e-44 | 145 |
MS.gene84863.t1 | AT5G10260 | 42.038 | 157 | 91 | 0 | 27 | 183 | 10 | 166 | 3.25e-43 | 145 |
MS.gene84863.t1 | AT2G44610 | 40.764 | 157 | 93 | 0 | 27 | 183 | 10 | 166 | 8.15e-42 | 141 |
MS.gene84863.t1 | AT2G22290 | 40.127 | 157 | 94 | 0 | 27 | 183 | 10 | 166 | 7.26e-40 | 136 |
MS.gene84863.t1 | AT5G64990 | 40.127 | 157 | 94 | 0 | 27 | 183 | 8 | 164 | 7.72e-39 | 134 |
MS.gene84863.t1 | AT4G39890 | 37.725 | 167 | 103 | 1 | 27 | 192 | 10 | 176 | 1.09e-38 | 134 |
MS.gene84863.t1 | AT5G03530 | 43.860 | 171 | 93 | 3 | 24 | 192 | 11 | 180 | 1.44e-38 | 133 |
MS.gene84863.t1 | AT5G03530 | 43.860 | 171 | 93 | 3 | 24 | 192 | 11 | 180 | 1.44e-38 | 133 |
MS.gene84863.t1 | AT5G03520 | 46.875 | 128 | 67 | 1 | 61 | 187 | 40 | 167 | 3.48e-38 | 132 |
MS.gene84863.t1 | AT4G19640 | 44.800 | 125 | 69 | 0 | 28 | 152 | 12 | 136 | 6.20e-37 | 127 |
MS.gene84863.t1 | AT4G19640 | 43.511 | 131 | 74 | 0 | 28 | 158 | 12 | 142 | 1.96e-36 | 127 |
MS.gene84863.t1 | AT5G64990 | 38.415 | 164 | 94 | 1 | 27 | 183 | 8 | 171 | 3.49e-36 | 127 |
MS.gene84863.t1 | AT3G09910 | 41.848 | 184 | 94 | 4 | 24 | 195 | 11 | 193 | 6.86e-36 | 126 |
MS.gene84863.t1 | AT3G09910 | 41.848 | 184 | 94 | 4 | 24 | 195 | 11 | 193 | 6.86e-36 | 126 |
MS.gene84863.t1 | AT3G09910 | 41.848 | 184 | 94 | 4 | 24 | 195 | 11 | 193 | 6.86e-36 | 126 |
MS.gene84863.t1 | AT3G09910 | 43.827 | 162 | 88 | 3 | 24 | 183 | 11 | 171 | 3.77e-35 | 124 |
MS.gene84863.t1 | AT3G09910 | 43.827 | 162 | 88 | 3 | 24 | 183 | 11 | 171 | 3.77e-35 | 124 |
MS.gene84863.t1 | AT3G18820 | 33.937 | 221 | 124 | 6 | 19 | 232 | 1 | 206 | 2.38e-32 | 117 |
MS.gene84863.t1 | AT1G52280 | 38.824 | 170 | 95 | 4 | 19 | 180 | 1 | 169 | 1.03e-31 | 115 |
MS.gene84863.t1 | AT2G21880 | 36.364 | 165 | 98 | 3 | 26 | 183 | 9 | 173 | 1.55e-30 | 112 |
MS.gene84863.t1 | AT4G09720 | 38.554 | 166 | 93 | 4 | 26 | 183 | 8 | 172 | 2.00e-30 | 112 |
MS.gene84863.t1 | AT3G16100 | 38.235 | 170 | 96 | 4 | 19 | 180 | 1 | 169 | 2.13e-30 | 112 |
MS.gene84863.t1 | AT1G49300 | 37.427 | 171 | 98 | 4 | 19 | 181 | 1 | 170 | 2.59e-30 | 112 |
MS.gene84863.t1 | AT1G49300 | 37.427 | 171 | 98 | 4 | 19 | 181 | 1 | 170 | 2.59e-30 | 112 |
MS.gene84863.t1 | AT1G22740 | 35.294 | 170 | 103 | 3 | 19 | 181 | 1 | 170 | 3.06e-30 | 111 |
MS.gene84863.t1 | AT4G09720 | 36.471 | 170 | 96 | 3 | 26 | 183 | 8 | 177 | 8.69e-30 | 110 |
MS.gene84863.t1 | AT4G09720 | 35.227 | 176 | 96 | 3 | 26 | 183 | 8 | 183 | 9.39e-29 | 108 |
MS.gene84863.t1 | AT5G39620 | 32.864 | 213 | 122 | 6 | 27 | 232 | 6 | 204 | 3.17e-27 | 103 |
MS.gene84863.t1 | AT5G55080 | 32.716 | 162 | 106 | 2 | 26 | 187 | 13 | 171 | 3.25e-25 | 99.0 |
MS.gene84863.t1 | AT5G46025 | 48.148 | 108 | 54 | 2 | 88 | 193 | 6 | 113 | 2.97e-24 | 93.6 |
MS.gene84863.t1 | AT2G44690 | 35.294 | 187 | 104 | 6 | 28 | 199 | 20 | 204 | 9.02e-24 | 95.1 |
MS.gene84863.t1 | AT2G21880 | 33.784 | 148 | 91 | 3 | 43 | 183 | 1 | 148 | 1.77e-22 | 90.9 |
MS.gene84863.t1 | AT2G21880 | 33.784 | 148 | 91 | 3 | 43 | 183 | 1 | 148 | 1.77e-22 | 90.9 |
MS.gene84863.t1 | AT4G09720 | 37.778 | 135 | 77 | 3 | 56 | 183 | 4 | 138 | 1.30e-21 | 88.2 |
MS.gene84863.t1 | AT4G09720 | 37.778 | 135 | 77 | 3 | 56 | 183 | 4 | 138 | 1.30e-21 | 88.2 |
MS.gene84863.t1 | AT4G09720 | 37.778 | 135 | 77 | 3 | 56 | 183 | 4 | 138 | 1.30e-21 | 88.2 |
MS.gene84863.t1 | AT5G20020 | 33.136 | 169 | 109 | 4 | 20 | 187 | 6 | 171 | 1.33e-21 | 89.7 |
MS.gene84863.t1 | AT5G55190 | 33.136 | 169 | 109 | 4 | 20 | 187 | 6 | 171 | 1.41e-21 | 89.4 |
MS.gene84863.t1 | AT5G20010 | 33.136 | 169 | 109 | 4 | 20 | 187 | 6 | 171 | 1.68e-21 | 89.4 |
MS.gene84863.t1 | AT4G35950 | 32.609 | 184 | 95 | 7 | 28 | 204 | 8 | 169 | 5.75e-21 | 87.4 |
MS.gene84863.t1 | AT2G21880 | 31.515 | 165 | 98 | 4 | 26 | 183 | 9 | 165 | 8.95e-21 | 87.0 |
MS.gene84863.t1 | AT4G35020 | 36.364 | 165 | 91 | 5 | 28 | 180 | 8 | 170 | 1.41e-20 | 86.3 |
MS.gene84863.t1 | AT4G35020 | 36.364 | 165 | 91 | 5 | 28 | 180 | 8 | 170 | 1.41e-20 | 86.3 |
MS.gene84863.t1 | AT4G35020 | 36.364 | 165 | 91 | 5 | 28 | 180 | 8 | 170 | 1.41e-20 | 86.3 |
MS.gene84863.t1 | AT1G75840 | 34.545 | 165 | 94 | 5 | 28 | 180 | 8 | 170 | 2.22e-20 | 85.9 |
MS.gene84863.t1 | AT2G17800 | 32.065 | 184 | 96 | 7 | 28 | 204 | 8 | 169 | 2.36e-20 | 85.5 |
MS.gene84863.t1 | AT2G17800 | 32.065 | 184 | 96 | 7 | 28 | 204 | 8 | 169 | 2.36e-20 | 85.5 |
MS.gene84863.t1 | AT1G20090 | 33.939 | 165 | 95 | 5 | 28 | 180 | 7 | 169 | 4.90e-20 | 84.7 |
MS.gene84863.t1 | AT3G51300 | 38.655 | 119 | 70 | 3 | 28 | 145 | 8 | 124 | 2.09e-19 | 83.2 |
MS.gene84863.t1 | AT4G28950 | 39.496 | 119 | 69 | 3 | 28 | 145 | 8 | 124 | 4.31e-19 | 82.4 |
MS.gene84863.t1 | AT4G35020 | 39.474 | 114 | 66 | 3 | 28 | 140 | 8 | 119 | 1.33e-18 | 79.7 |
MS.gene84863.t1 | AT4G35020 | 39.474 | 114 | 66 | 3 | 28 | 140 | 8 | 119 | 1.33e-18 | 79.7 |
MS.gene84863.t1 | AT5G45970 | 37.815 | 119 | 71 | 3 | 28 | 145 | 8 | 124 | 5.18e-18 | 79.7 |
MS.gene84863.t1 | AT5G62880 | 31.844 | 179 | 94 | 6 | 28 | 187 | 10 | 179 | 7.58e-18 | 79.3 |
MS.gene84863.t1 | AT3G48040 | 33.939 | 165 | 95 | 5 | 28 | 180 | 10 | 172 | 1.02e-17 | 79.0 |
MS.gene84863.t1 | AT5G62880 | 36.496 | 137 | 77 | 5 | 28 | 163 | 10 | 137 | 1.18e-17 | 78.2 |
MS.gene84863.t1 | AT3G48040 | 38.017 | 121 | 72 | 3 | 28 | 147 | 10 | 128 | 3.45e-17 | 76.6 |
MS.gene84863.t1 | AT4G08190 | 51.562 | 64 | 28 | 1 | 117 | 180 | 67 | 127 | 1.36e-12 | 63.2 |
MS.gene84863.t1 | AT3G21700 | 25.967 | 181 | 118 | 6 | 8 | 180 | 93 | 265 | 1.38e-11 | 63.2 |
MS.gene84863.t1 | AT3G51290 | 39.241 | 79 | 46 | 2 | 68 | 145 | 648 | 725 | 6.72e-11 | 62.0 |
Find 42 sgRNAs with CRISPR-Local
Find 99 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAATAGATTATGTGTTTA+AGG | 0.115067 | 8.4:+69772718 | MS.gene84863:CDS |
CATTTGATCATGTTGCTAAA+TGG | 0.168189 | 8.4:+69774162 | MS.gene84863:CDS |
TAATAGTGTAGTTTCTAAAA+AGG | 0.249947 | 8.4:+69774385 | MS.gene84863:CDS |
ACTAGGACTGTCACTATTAA+TGG | 0.266282 | 8.4:+69772848 | MS.gene84863:CDS |
GTGAAGGGGATTGCACTAAA+AGG | 0.273863 | 8.4:+69774425 | MS.gene84863:CDS |
TCAGAGACTTCAGCTCTTAC+TGG | 0.284192 | 8.4:+69774320 | MS.gene84863:CDS |
AGAGAGAGATGAACCTTTCT+TGG | 0.285797 | 8.4:-69772907 | None:intergenic |
ATGATCAAATGATTGTCTTT+TGG | 0.311811 | 8.4:-69774150 | None:intergenic |
TCTAAGATTGATGTAATTTC+AGG | 0.313382 | 8.4:+69774449 | MS.gene84863:CDS |
GCATACTATAGAGGTGCATT+AGG | 0.336401 | 8.4:+69774104 | MS.gene84863:CDS |
TTTGACTCAAAGTCAACTAT+TGG | 0.357309 | 8.4:+69772812 | MS.gene84863:CDS |
TGTAATTTCAGGTGCTGAAT+TGG | 0.361003 | 8.4:+69774460 | MS.gene84863:CDS |
CATACTATAGAGGTGCATTA+GGG | 0.364580 | 8.4:+69774105 | MS.gene84863:CDS |
AAGTAATTAAAGCTCAGATC+TGG | 0.376078 | 8.4:+69772873 | MS.gene84863:CDS |
CAAGAAAATAGATTATGATA+TGG | 0.396441 | 8.4:+69772691 | MS.gene84863:CDS |
ATTTGATCATGTTGCTAAAT+GGG | 0.407497 | 8.4:+69774163 | MS.gene84863:CDS |
TCTCTTGCTTCTTCTCACCC+TGG | 0.465966 | 8.4:-69772661 | None:intergenic |
GGTGAGAAGAAGCAAGAGAA+TGG | 0.479409 | 8.4:+69772665 | MS.gene84863:CDS |
GTGTTTAAGGTAGTTGTCAT+TGG | 0.480881 | 8.4:+69772731 | MS.gene84863:CDS |
GGGATACTGCTGGCCAAGAA+AGG | 0.510670 | 8.4:+69772894 | MS.gene84863:CDS |
TGAAGGGGATTGCACTAAAA+GGG | 0.515906 | 8.4:+69774426 | MS.gene84863:CDS |
AGTAATTAAAGCTCAGATCT+GGG | 0.523029 | 8.4:+69772874 | MS.gene84863:CDS |
AGCTCTTACTGGTGTGAATG+TGG | 0.537237 | 8.4:+69774331 | MS.gene84863:CDS |
TGACCTTGTTGATTTGAGAA+TGG | 0.538385 | 8.4:+69774247 | MS.gene84863:CDS |
TCAATTGTGATCATGCTAGT+TGG | 0.549084 | 8.4:+69774215 | MS.gene84863:CDS |
TTGGAATGTGGTAATGTGAA+GGG | 0.563064 | 8.4:+69774410 | MS.gene84863:CDS |
TTGGTGTTGAATTTCAAACT+AGG | 0.565498 | 8.4:+69772831 | MS.gene84863:CDS |
GCTCAGATCTGGGATACTGC+TGG | 0.566767 | 8.4:+69772884 | MS.gene84863:CDS |
GTAACAAGTGCATACTATAG+AGG | 0.570377 | 8.4:+69774095 | MS.gene84863:CDS |
TCATGTTGCTAAATGGGTTG+AGG | 0.586597 | 8.4:+69774169 | MS.gene84863:CDS |
CTTACTGGTGTGAATGTGGA+GGG | 0.593992 | 8.4:+69774335 | MS.gene84863:CDS |
TCTTACTGGTGTGAATGTGG+AGG | 0.594853 | 8.4:+69774334 | MS.gene84863:CDS |
AACTCAACTGCATCTTCAGT+AGG | 0.619231 | 8.4:-69774272 | None:intergenic |
GTCATTGGTGACTCAGCAGT+AGG | 0.628855 | 8.4:+69772746 | MS.gene84863:CDS |
GTTGAGTTTGCAGAAGACCA+AGG | 0.629515 | 8.4:+69774287 | MS.gene84863:CDS |
TCTCTGAGAAGAATAAACCT+TGG | 0.630408 | 8.4:-69774304 | None:intergenic |
TGGAATGTGGTAATGTGAAG+GGG | 0.631602 | 8.4:+69774411 | MS.gene84863:CDS |
ATTGGAATGTGGTAATGTGA+AGG | 0.637056 | 8.4:+69774409 | MS.gene84863:CDS |
ATACTATAGAGGTGCATTAG+GGG | 0.644147 | 8.4:+69774106 | MS.gene84863:CDS |
ATCATGCTAGTTGGTAACAA+AGG | 0.656634 | 8.4:+69774224 | MS.gene84863:CDS |
TTGTTGCTGATATAGGTACA+GGG | 0.661207 | 8.4:+69774070 | MS.gene84863:intron |
GAACCATTCTCAAATCAACA+AGG | 0.712150 | 8.4:-69774250 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTATGTTACATTAATGTAC+TGG | + | chr8.4:69773221-69773240 | MS.gene84863:intron | 20.0% |
!! | CAAGAAAATAGATTATGATA+TGG | + | chr8.4:69772691-69772710 | MS.gene84863:CDS | 20.0% |
!! | GAAAATAGATTATGTGTTTA+AGG | + | chr8.4:69772718-69772737 | MS.gene84863:CDS | 20.0% |
!! | TCAAAATGGTACATAATTAT+TGG | + | chr8.4:69773013-69773032 | MS.gene84863:intron | 20.0% |
!! | TTATTATTGCAATATTAGTG+TGG | + | chr8.4:69773131-69773150 | MS.gene84863:intron | 20.0% |
!!! | TAATAGTGTAGTTTCTAAAA+AGG | + | chr8.4:69774385-69774404 | MS.gene84863:CDS | 20.0% |
! | AAAGAAGAAATCTGATCAAA+AGG | + | chr8.4:69773510-69773529 | MS.gene84863:intron | 25.0% |
! | AACTACATTGAGTTTCAAAA+TGG | + | chr8.4:69772999-69773018 | MS.gene84863:intron | 25.0% |
! | ATTTGATCATGTTGCTAAAT+GGG | + | chr8.4:69774163-69774182 | MS.gene84863:CDS | 25.0% |
! | GAAAAACTCAAATACTATCA+AGG | + | chr8.4:69772768-69772787 | MS.gene84863:CDS | 25.0% |
! | GGTAAATGATCAATTGTTAT+GGG | - | chr8.4:69773838-69773857 | None:intergenic | 25.0% |
! | TGGTAAATGATCAATTGTTA+TGG | - | chr8.4:69773839-69773858 | None:intergenic | 25.0% |
! | TTATGAAGAAGCAAAAATGT+AGG | + | chr8.4:69773889-69773908 | MS.gene84863:intron | 25.0% |
!! | ATGATCAAATGATTGTCTTT+TGG | - | chr8.4:69774153-69774172 | None:intergenic | 25.0% |
!! | GTAAATTTTGTTGCTGATAT+AGG | + | chr8.4:69774063-69774082 | MS.gene84863:intron | 25.0% |
!! | TCTAAGATTGATGTAATTTC+AGG | + | chr8.4:69774449-69774468 | MS.gene84863:CDS | 25.0% |
AAGTAATTAAAGCTCAGATC+TGG | + | chr8.4:69772873-69772892 | MS.gene84863:CDS | 30.0% | |
AGTAATTAAAGCTCAGATCT+GGG | + | chr8.4:69772874-69772893 | MS.gene84863:CDS | 30.0% | |
CATTTGATCATGTTGCTAAA+TGG | + | chr8.4:69774162-69774181 | MS.gene84863:CDS | 30.0% | |
CGAACATTTGACAACATTAT+TGG | - | chr8.4:69773859-69773878 | None:intergenic | 30.0% | |
GTTACATTAATGTACTGGAA+GGG | + | chr8.4:69773226-69773245 | MS.gene84863:intron | 30.0% | |
TAGGTGTTTAGATACTTCAT+GGG | + | chr8.4:69773780-69773799 | MS.gene84863:intron | 30.0% | |
TGAAACTCAATGTAGTTCAA+GGG | - | chr8.4:69772996-69773015 | None:intergenic | 30.0% | |
TGTTACATTAATGTACTGGA+AGG | + | chr8.4:69773225-69773244 | MS.gene84863:intron | 30.0% | |
TTGAAACTCAATGTAGTTCA+AGG | - | chr8.4:69772997-69773016 | None:intergenic | 30.0% | |
TTGCAATATTAGTGTGGTAT+TGG | + | chr8.4:69773137-69773156 | MS.gene84863:intron | 30.0% | |
TTGTCAAATGTTCGATTCTT+AGG | + | chr8.4:69773865-69773884 | MS.gene84863:intron | 30.0% | |
TTTGACTCAAAGTCAACTAT+TGG | + | chr8.4:69772812-69772831 | MS.gene84863:CDS | 30.0% | |
! | CTGAACAATTTTCAATCCAT+TGG | - | chr8.4:69773344-69773363 | None:intergenic | 30.0% |
! | TGTAGTTTCTAAAAAGGCAT+TGG | + | chr8.4:69774391-69774410 | MS.gene84863:CDS | 30.0% |
!! | ATTATACCCTGCTTTAGAAA+AGG | + | chr8.4:69773304-69773323 | MS.gene84863:intron | 30.0% |
!! | TTGGTGTTGAATTTCAAACT+AGG | + | chr8.4:69772831-69772850 | MS.gene84863:CDS | 30.0% |
!!! | AGAGTGCTCATTTTTAACTT+AGG | - | chr8.4:69773040-69773059 | None:intergenic | 30.0% |
ACTAGGACTGTCACTATTAA+TGG | + | chr8.4:69772848-69772867 | MS.gene84863:CDS | 35.0% | |
GAACCATTCTCAAATCAACA+AGG | - | chr8.4:69774253-69774272 | None:intergenic | 35.0% | |
GAGAATGAGCAAAATGTGTT+GGG | - | chr8.4:69773572-69773591 | None:intergenic | 35.0% | |
GCAAAAATGTAGGAAGTGAT+CGG | + | chr8.4:69773899-69773918 | MS.gene84863:intron | 35.0% | |
GTAACAAGTGCATACTATAG+AGG | + | chr8.4:69774095-69774114 | MS.gene84863:CDS | 35.0% | |
GTAGGTGTTTAGATACTTCA+TGG | + | chr8.4:69773779-69773798 | MS.gene84863:intron | 35.0% | |
GTTAAAAATGAGCACTCTGA+CGG | + | chr8.4:69773042-69773061 | MS.gene84863:intron | 35.0% | |
TAGTTCAAGGGAAATAGAGA+AGG | - | chr8.4:69772984-69773003 | None:intergenic | 35.0% | |
TCAATTGTGATCATGCTAGT+TGG | + | chr8.4:69774215-69774234 | MS.gene84863:CDS | 35.0% | |
TGAGAATGAGCAAAATGTGT+TGG | - | chr8.4:69773573-69773592 | None:intergenic | 35.0% | |
TTAGTCTCTGTAGTTGTATG+CGG | + | chr8.4:69773954-69773973 | MS.gene84863:intron | 35.0% | |
TTGTTCAGTGTGTGCATTAA+TGG | + | chr8.4:69773356-69773375 | MS.gene84863:intron | 35.0% | |
TTGTTGCTGATATAGGTACA+GGG | + | chr8.4:69774070-69774089 | MS.gene84863:intron | 35.0% | |
TTTGTTGCTGATATAGGTAC+AGG | + | chr8.4:69774069-69774088 | MS.gene84863:intron | 35.0% | |
! | ATACTATAGAGGTGCATTAG+GGG | + | chr8.4:69774106-69774125 | MS.gene84863:CDS | 35.0% |
! | ATTGGAATGTGGTAATGTGA+AGG | + | chr8.4:69774409-69774428 | MS.gene84863:CDS | 35.0% |
! | CATACTATAGAGGTGCATTA+GGG | + | chr8.4:69774105-69774124 | MS.gene84863:CDS | 35.0% |
! | GTGTTTAAGGTAGTTGTCAT+TGG | + | chr8.4:69772731-69772750 | MS.gene84863:CDS | 35.0% |
! | TCTCTGAGAAGAATAAACCT+TGG | - | chr8.4:69774307-69774326 | None:intergenic | 35.0% |
! | TTGGAATGTGGTAATGTGAA+GGG | + | chr8.4:69774410-69774429 | MS.gene84863:CDS | 35.0% |
!! | AGCATTTTTGGAAGTTTGGT+TGG | + | chr8.4:69773720-69773739 | MS.gene84863:intron | 35.0% |
!! | ATCATGCTAGTTGGTAACAA+AGG | + | chr8.4:69774224-69774243 | MS.gene84863:CDS | 35.0% |
!! | GCATTTTTGGAAGTTTGGTT+GGG | + | chr8.4:69773721-69773740 | MS.gene84863:intron | 35.0% |
!! | TCTAAAAAGGCATTGGAATG+TGG | + | chr8.4:69774398-69774417 | MS.gene84863:CDS | 35.0% |
!! | TGACCTTGTTGATTTGAGAA+TGG | + | chr8.4:69774247-69774266 | MS.gene84863:CDS | 35.0% |
!! | TGTAATTTCAGGTGCTGAAT+TGG | + | chr8.4:69774460-69774479 | MS.gene84863:CDS | 35.0% |
!!! | CAGAGGCATTTTTAGAAGTT+TGG | - | chr8.4:69773597-69773616 | None:intergenic | 35.0% |
!!! | GGAAGGGTTTTTTAAGTATG+AGG | + | chr8.4:69773242-69773261 | MS.gene84863:intron | 35.0% |
AAAAGGAGAGAATACACCGT+AGG | + | chr8.4:69773527-69773546 | MS.gene84863:intron | 40.0% | |
AACTCAACTGCATCTTCAGT+AGG | - | chr8.4:69774275-69774294 | None:intergenic | 40.0% | |
AGAGAGAGATGAACCTTTCT+TGG | - | chr8.4:69772910-69772929 | None:intergenic | 40.0% | |
AGAGCAGAATTCAACACCTA+CGG | - | chr8.4:69773546-69773565 | None:intergenic | 40.0% | |
ATAACACACTGACATGAGCT+TGG | + | chr8.4:69773426-69773445 | MS.gene84863:intron | 40.0% | |
GTTGTATGCGGAATATGTCT+TGG | + | chr8.4:69773966-69773985 | MS.gene84863:intron | 40.0% | |
TGAAGGGGATTGCACTAAAA+GGG | + | chr8.4:69774426-69774445 | MS.gene84863:CDS | 40.0% | |
TTTGGTTGGGAATGAGCAAA+AGG | + | chr8.4:69773734-69773753 | MS.gene84863:intron | 40.0% | |
! | GCATACTATAGAGGTGCATT+AGG | + | chr8.4:69774104-69774123 | MS.gene84863:CDS | 40.0% |
! | TATGAGGCAGTGAACAGTTT+TGG | + | chr8.4:69773258-69773277 | MS.gene84863:intron | 40.0% |
! | TGGAATGTGGTAATGTGAAG+GGG | + | chr8.4:69774411-69774430 | MS.gene84863:CDS | 40.0% |
!! | TACCCTGCTTTAGAAAAGGT+AGG | + | chr8.4:69773308-69773327 | MS.gene84863:intron | 40.0% |
!! | TCATGTTGCTAAATGGGTTG+AGG | + | chr8.4:69774169-69774188 | MS.gene84863:CDS | 40.0% |
!!! | CACCTACCTTTTCTAAAGCA+GGG | - | chr8.4:69773313-69773332 | None:intergenic | 40.0% |
!!! | CAGGAGCATTTTTGGAAGTT+TGG | + | chr8.4:69773716-69773735 | MS.gene84863:intron | 40.0% |
!!! | TCACCTACCTTTTCTAAAGC+AGG | - | chr8.4:69773314-69773333 | None:intergenic | 40.0% |
AGCTCTTACTGGTGTGAATG+TGG | + | chr8.4:69774331-69774350 | MS.gene84863:CDS | 45.0% | |
CTTACTGGTGTGAATGTGGA+GGG | + | chr8.4:69774335-69774354 | MS.gene84863:CDS | 45.0% | |
GGGAGAAGAGTAGAATTCGT+AGG | + | chr8.4:69773761-69773780 | MS.gene84863:intron | 45.0% | |
GGTAGGTGACTAGATTCCAA+TGG | + | chr8.4:69773325-69773344 | MS.gene84863:intron | 45.0% | |
GGTGAGAAGAAGCAAGAGAA+TGG | + | chr8.4:69772665-69772684 | MS.gene84863:CDS | 45.0% | |
GTGAAGGGGATTGCACTAAA+AGG | + | chr8.4:69774425-69774444 | MS.gene84863:CDS | 45.0% | |
GTTGAGTTTGCAGAAGACCA+AGG | + | chr8.4:69774287-69774306 | MS.gene84863:CDS | 45.0% | |
TCAGAGACTTCAGCTCTTAC+TGG | + | chr8.4:69774320-69774339 | MS.gene84863:CDS | 45.0% | |
TCTTACTGGTGTGAATGTGG+AGG | + | chr8.4:69774334-69774353 | MS.gene84863:CDS | 45.0% | |
TGACATGAGCTTGGTACAAG+TGG | + | chr8.4:69773435-69773454 | MS.gene84863:intron | 45.0% | |
! | TGGGAATGAGCAAAAGGTGT+TGG | + | chr8.4:69773740-69773759 | MS.gene84863:intron | 45.0% |
!! | GGGAATGAGCAAAAGGTGTT+GGG | + | chr8.4:69773741-69773760 | MS.gene84863:intron | 45.0% |
!!! | AACTCACGCAGGAGCATTTT+TGG | + | chr8.4:69773708-69773727 | MS.gene84863:intron | 45.0% |
CTCTGACGGTGATTATCACG+CGG | + | chr8.4:69773056-69773075 | MS.gene84863:intron | 50.0% | |
GATTATCACGCGGACACATG+TGG | + | chr8.4:69773066-69773085 | MS.gene84863:intron | 50.0% | |
GCGTGAGTTAACTTACGCAG+AGG | - | chr8.4:69773614-69773633 | None:intergenic | 50.0% | |
TCTCTTGCTTCTTCTCACCC+TGG | - | chr8.4:69772664-69772683 | None:intergenic | 50.0% | |
! | GTCATTGGTGACTCAGCAGT+AGG | + | chr8.4:69772746-69772765 | MS.gene84863:CDS | 50.0% |
CAGCGTGTGTTAACTCACGC+AGG | + | chr8.4:69773697-69773716 | MS.gene84863:intron | 55.0% | |
CTGCGTGAGTTAACACACGC+AGG | - | chr8.4:69773680-69773699 | None:intergenic | 55.0% | |
GGGATACTGCTGGCCAAGAA+AGG | + | chr8.4:69772894-69772913 | MS.gene84863:CDS | 55.0% | |
! | GCTCAGATCTGGGATACTGC+TGG | + | chr8.4:69772884-69772903 | MS.gene84863:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.4 | gene | 69772656 | 69774523 | 69772656 | ID=MS.gene84863 |
chr8.4 | mRNA | 69772656 | 69774523 | 69772656 | ID=MS.gene84863.t1;Parent=MS.gene84863 |
chr8.4 | exon | 69772656 | 69772915 | 69772656 | ID=MS.gene84863.t1.exon1;Parent=MS.gene84863.t1 |
chr8.4 | CDS | 69772656 | 69772915 | 69772656 | ID=cds.MS.gene84863.t1;Parent=MS.gene84863.t1 |
chr8.4 | exon | 69774085 | 69774523 | 69774085 | ID=MS.gene84863.t1.exon2;Parent=MS.gene84863.t1 |
chr8.4 | CDS | 69774085 | 69774523 | 69774085 | ID=cds.MS.gene84863.t1;Parent=MS.gene84863.t1 |
Gene Sequence |
Protein sequence |