Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26865.t1 | XP_013456917.1 | 100 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 3.00E-115 | 424.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26865.t1 | Q9FJH0 | 92.1 | 216 | 17 | 0 | 1 | 216 | 1 | 216 | 6.6e-111 | 401.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26865.t1 | I3SPW7 | 100.0 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 2.2e-115 | 424.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26865.t1 | MTR_4g088090 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.26e-161 | 445 |
MS.gene26865.t1 | MTR_2g014990 | 95.392 | 217 | 10 | 0 | 1 | 217 | 1 | 217 | 1.68e-155 | 429 |
MS.gene26865.t1 | MTR_4g079350 | 94.009 | 217 | 13 | 0 | 1 | 217 | 1 | 217 | 1.64e-154 | 427 |
MS.gene26865.t1 | MTR_2g090865 | 80.556 | 216 | 39 | 2 | 1 | 216 | 1 | 213 | 3.82e-128 | 360 |
MS.gene26865.t1 | MTR_2g075950 | 78.539 | 219 | 43 | 3 | 1 | 217 | 1 | 217 | 2.08e-125 | 353 |
MS.gene26865.t1 | MTR_2g083860 | 76.256 | 219 | 47 | 2 | 1 | 216 | 1 | 217 | 9.28e-118 | 334 |
MS.gene26865.t1 | MTR_3g069510 | 67.593 | 216 | 66 | 2 | 3 | 216 | 2 | 215 | 1.18e-107 | 308 |
MS.gene26865.t1 | MTR_2g005510 | 66.977 | 215 | 66 | 2 | 6 | 217 | 8 | 220 | 1.11e-106 | 306 |
MS.gene26865.t1 | MTR_4g064897 | 67.593 | 216 | 65 | 3 | 3 | 216 | 2 | 214 | 6.91e-105 | 301 |
MS.gene26865.t1 | MTR_1g052475 | 61.905 | 210 | 75 | 2 | 11 | 215 | 13 | 222 | 3.28e-94 | 275 |
MS.gene26865.t1 | MTR_0262s0050 | 60.190 | 211 | 78 | 3 | 11 | 217 | 13 | 221 | 2.56e-89 | 262 |
MS.gene26865.t1 | MTR_8g089985 | 57.870 | 216 | 87 | 1 | 6 | 217 | 10 | 225 | 4.45e-88 | 259 |
MS.gene26865.t1 | MTR_8g027220 | 57.407 | 216 | 90 | 1 | 4 | 217 | 17 | 232 | 2.63e-87 | 257 |
MS.gene26865.t1 | MTR_6g079550 | 56.808 | 213 | 88 | 2 | 7 | 217 | 6 | 216 | 3.94e-87 | 256 |
MS.gene26865.t1 | MTR_3g086980 | 55.814 | 215 | 88 | 2 | 6 | 215 | 9 | 221 | 1.52e-86 | 255 |
MS.gene26865.t1 | MTR_7g405790 | 57.005 | 207 | 87 | 1 | 12 | 216 | 14 | 220 | 1.62e-79 | 237 |
MS.gene26865.t1 | MTR_8g036220 | 53.304 | 227 | 95 | 4 | 1 | 216 | 1 | 227 | 8.43e-79 | 236 |
MS.gene26865.t1 | MTR_1g078200 | 54.717 | 212 | 90 | 3 | 11 | 216 | 12 | 223 | 1.28e-78 | 235 |
MS.gene26865.t1 | MTR_7g051940 | 54.327 | 208 | 88 | 2 | 12 | 216 | 12 | 215 | 4.09e-75 | 226 |
MS.gene26865.t1 | MTR_8g107070 | 57.212 | 208 | 84 | 2 | 7 | 211 | 8 | 213 | 6.66e-75 | 227 |
MS.gene26865.t1 | MTR_7g117910 | 47.945 | 219 | 94 | 3 | 3 | 217 | 10 | 212 | 8.39e-67 | 204 |
MS.gene26865.t1 | MTR_2g027660 | 47.619 | 210 | 106 | 2 | 10 | 216 | 3 | 211 | 2.00e-65 | 201 |
MS.gene26865.t1 | MTR_6g021790 | 45.070 | 213 | 107 | 3 | 10 | 216 | 3 | 211 | 9.46e-63 | 194 |
MS.gene26865.t1 | MTR_7g081700 | 45.498 | 211 | 105 | 1 | 7 | 217 | 2 | 202 | 1.46e-59 | 186 |
MS.gene26865.t1 | MTR_8g031660 | 46.667 | 210 | 103 | 4 | 10 | 216 | 3 | 206 | 1.40e-57 | 181 |
MS.gene26865.t1 | MTR_8g006970 | 46.154 | 208 | 101 | 2 | 11 | 217 | 20 | 217 | 1.47e-57 | 181 |
MS.gene26865.t1 | MTR_1g115325 | 42.925 | 212 | 108 | 3 | 9 | 215 | 11 | 214 | 3.20e-56 | 178 |
MS.gene26865.t1 | MTR_1g068740 | 44.037 | 218 | 109 | 5 | 5 | 217 | 7 | 216 | 4.57e-56 | 177 |
MS.gene26865.t1 | MTR_1g068730 | 43.578 | 218 | 110 | 5 | 5 | 217 | 7 | 216 | 2.11e-55 | 176 |
MS.gene26865.t1 | MTR_7g100020 | 44.860 | 214 | 105 | 5 | 9 | 217 | 11 | 216 | 1.39e-54 | 174 |
MS.gene26865.t1 | MTR_8g006970 | 52.410 | 166 | 79 | 0 | 9 | 174 | 4 | 169 | 1.84e-54 | 172 |
MS.gene26865.t1 | MTR_8g031870 | 51.899 | 158 | 76 | 0 | 12 | 169 | 5 | 162 | 2.16e-54 | 172 |
MS.gene26865.t1 | MTR_8g031680 | 40.670 | 209 | 121 | 2 | 10 | 216 | 3 | 210 | 2.10e-53 | 171 |
MS.gene26865.t1 | MTR_2g005500 | 47.929 | 169 | 88 | 0 | 6 | 174 | 2 | 170 | 2.36e-51 | 165 |
MS.gene26865.t1 | MTR_4g063160 | 42.453 | 212 | 110 | 5 | 9 | 215 | 11 | 215 | 1.51e-50 | 163 |
MS.gene26865.t1 | MTR_8g031830 | 50.327 | 153 | 76 | 0 | 12 | 164 | 5 | 157 | 3.30e-50 | 162 |
MS.gene26865.t1 | MTR_2g096550 | 39.631 | 217 | 116 | 5 | 4 | 215 | 6 | 212 | 3.20e-49 | 160 |
MS.gene26865.t1 | MTR_3g064390 | 39.109 | 202 | 110 | 2 | 15 | 216 | 12 | 200 | 1.99e-48 | 157 |
MS.gene26865.t1 | MTR_8g093740 | 40.000 | 220 | 115 | 5 | 1 | 215 | 1 | 208 | 2.36e-48 | 157 |
MS.gene26865.t1 | MTR_1g068730 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 6.11e-48 | 155 |
MS.gene26865.t1 | MTR_5g076590 | 39.109 | 202 | 110 | 2 | 15 | 216 | 12 | 200 | 6.70e-48 | 156 |
MS.gene26865.t1 | MTR_1g068740 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 8.31e-48 | 155 |
MS.gene26865.t1 | MTR_1g094220 | 44.785 | 163 | 89 | 1 | 15 | 176 | 33 | 195 | 3.98e-47 | 154 |
MS.gene26865.t1 | MTR_7g103070 | 42.723 | 213 | 105 | 4 | 10 | 216 | 13 | 214 | 1.24e-46 | 153 |
MS.gene26865.t1 | MTR_1g029450 | 40.092 | 217 | 106 | 6 | 9 | 216 | 13 | 214 | 1.61e-46 | 153 |
MS.gene26865.t1 | MTR_3g096350 | 41.509 | 212 | 107 | 5 | 9 | 215 | 8 | 207 | 1.81e-46 | 152 |
MS.gene26865.t1 | MTR_1g094220 | 44.937 | 158 | 86 | 1 | 15 | 171 | 33 | 190 | 5.34e-46 | 151 |
MS.gene26865.t1 | MTR_4g099470 | 43.103 | 174 | 89 | 1 | 44 | 217 | 15 | 178 | 3.13e-45 | 149 |
MS.gene26865.t1 | MTR_1g094220 | 46.104 | 154 | 82 | 1 | 15 | 167 | 33 | 186 | 3.25e-45 | 149 |
MS.gene26865.t1 | MTR_1g094220 | 43.017 | 179 | 92 | 2 | 15 | 192 | 33 | 202 | 6.11e-45 | 150 |
MS.gene26865.t1 | MTR_2g102060 | 37.438 | 203 | 111 | 3 | 15 | 216 | 12 | 199 | 7.80e-44 | 145 |
MS.gene26865.t1 | MTR_1g090717 | 41.014 | 217 | 110 | 6 | 6 | 216 | 8 | 212 | 9.37e-44 | 146 |
MS.gene26865.t1 | MTR_1g062760 | 41.981 | 212 | 105 | 6 | 10 | 215 | 11 | 210 | 2.68e-43 | 145 |
MS.gene26865.t1 | MTR_4g098950 | 34.197 | 193 | 109 | 1 | 14 | 206 | 10 | 184 | 8.34e-42 | 140 |
MS.gene26865.t1 | MTR_5g013900 | 33.679 | 193 | 110 | 1 | 14 | 206 | 10 | 184 | 9.25e-42 | 140 |
MS.gene26865.t1 | MTR_8g103550 | 40.000 | 160 | 96 | 0 | 15 | 174 | 11 | 170 | 2.56e-41 | 139 |
MS.gene26865.t1 | MTR_3g087160 | 36.306 | 157 | 100 | 0 | 14 | 170 | 10 | 166 | 9.34e-40 | 135 |
MS.gene26865.t1 | MTR_8g090215 | 36.306 | 157 | 100 | 0 | 14 | 170 | 10 | 166 | 1.08e-39 | 135 |
MS.gene26865.t1 | MTR_4g069850 | 36.190 | 210 | 113 | 7 | 13 | 214 | 8 | 204 | 8.08e-39 | 133 |
MS.gene26865.t1 | MTR_2g101890 | 38.071 | 197 | 104 | 6 | 13 | 201 | 10 | 196 | 6.58e-38 | 131 |
MS.gene26865.t1 | MTR_4g012940 | 37.500 | 200 | 103 | 7 | 13 | 202 | 8 | 195 | 2.67e-37 | 129 |
MS.gene26865.t1 | MTR_3g064390 | 46.400 | 125 | 67 | 0 | 15 | 139 | 12 | 136 | 3.38e-37 | 127 |
MS.gene26865.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 5.78e-37 | 126 |
MS.gene26865.t1 | MTR_1g097420 | 39.506 | 162 | 91 | 3 | 13 | 167 | 8 | 169 | 7.83e-37 | 128 |
MS.gene26865.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 1.01e-36 | 126 |
MS.gene26865.t1 | MTR_8g092020 | 41.358 | 162 | 88 | 3 | 13 | 167 | 12 | 173 | 1.42e-36 | 127 |
MS.gene26865.t1 | MTR_8g093740 | 38.418 | 177 | 93 | 4 | 44 | 215 | 10 | 175 | 3.24e-33 | 118 |
MS.gene26865.t1 | MTR_1g069245 | 66.316 | 95 | 28 | 2 | 26 | 120 | 109 | 199 | 4.34e-33 | 119 |
MS.gene26865.t1 | MTR_7g103070 | 41.071 | 168 | 82 | 4 | 55 | 216 | 2 | 158 | 2.76e-32 | 115 |
MS.gene26865.t1 | MTR_6g039490 | 37.654 | 162 | 94 | 3 | 13 | 167 | 8 | 169 | 7.62e-32 | 115 |
MS.gene26865.t1 | MTR_1g097420 | 30.734 | 218 | 117 | 4 | 13 | 196 | 8 | 225 | 1.23e-30 | 113 |
MS.gene26865.t1 | MTR_3g107707 | 30.526 | 190 | 126 | 4 | 14 | 203 | 14 | 197 | 3.63e-26 | 100 |
MS.gene26865.t1 | MTR_3g107713 | 30.526 | 190 | 126 | 4 | 14 | 203 | 14 | 197 | 3.71e-26 | 100 |
MS.gene26865.t1 | MTR_2g078000 | 89.796 | 49 | 5 | 0 | 74 | 122 | 46 | 94 | 4.56e-26 | 97.4 |
MS.gene26865.t1 | MTR_3g107717 | 31.016 | 187 | 123 | 4 | 14 | 200 | 14 | 194 | 8.04e-26 | 100 |
MS.gene26865.t1 | MTR_2g005500 | 32.544 | 169 | 74 | 1 | 6 | 174 | 2 | 130 | 2.67e-22 | 89.4 |
MS.gene26865.t1 | MTR_8g031810 | 43.689 | 103 | 44 | 1 | 12 | 114 | 5 | 93 | 2.99e-22 | 87.4 |
MS.gene26865.t1 | MTR_2g078560 | 84.783 | 46 | 7 | 0 | 75 | 120 | 54 | 99 | 1.09e-20 | 88.6 |
MS.gene26865.t1 | MTR_1452s0010 | 43.038 | 79 | 45 | 0 | 33 | 111 | 1 | 79 | 5.51e-20 | 81.6 |
MS.gene26865.t1 | MTR_4g113620 | 26.425 | 193 | 127 | 5 | 14 | 206 | 14 | 191 | 7.04e-20 | 84.3 |
MS.gene26865.t1 | MTR_3g078260 | 30.387 | 181 | 112 | 5 | 13 | 181 | 8 | 186 | 7.35e-20 | 84.3 |
MS.gene26865.t1 | MTR_4g088055 | 37.500 | 120 | 72 | 3 | 13 | 131 | 6 | 123 | 7.96e-20 | 84.0 |
MS.gene26865.t1 | MTR_4g073250 | 29.834 | 181 | 113 | 5 | 13 | 181 | 6 | 184 | 2.71e-19 | 82.4 |
MS.gene26865.t1 | MTR_6g087980 | 36.290 | 124 | 76 | 3 | 13 | 135 | 6 | 127 | 2.74e-19 | 82.8 |
MS.gene26865.t1 | MTR_2g090875 | 31.138 | 167 | 101 | 5 | 13 | 167 | 6 | 170 | 5.81e-19 | 81.6 |
MS.gene26865.t1 | MTR_5g022600 | 31.737 | 167 | 100 | 5 | 13 | 167 | 6 | 170 | 1.00e-18 | 80.9 |
MS.gene26865.t1 | MTR_8g075240 | 31.737 | 167 | 100 | 5 | 13 | 167 | 6 | 170 | 2.40e-18 | 79.7 |
MS.gene26865.t1 | MTR_3g053480 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 7.03e-16 | 69.7 |
MS.gene26865.t1 | MTR_1686s0010 | 32.609 | 92 | 62 | 0 | 33 | 124 | 1 | 92 | 2.82e-15 | 68.9 |
MS.gene26865.t1 | MTR_3g078260 | 34.483 | 116 | 73 | 3 | 13 | 127 | 8 | 121 | 3.35e-15 | 70.5 |
MS.gene26865.t1 | MTR_8g099250 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 2.96e-14 | 65.5 |
MS.gene26865.t1 | MTR_1g059590 | 30.058 | 173 | 111 | 4 | 10 | 182 | 428 | 590 | 3.35e-14 | 71.2 |
MS.gene26865.t1 | MTR_1g059590 | 30.058 | 173 | 111 | 4 | 10 | 182 | 395 | 557 | 3.75e-14 | 70.9 |
MS.gene26865.t1 | MTR_5g092060 | 23.958 | 192 | 137 | 4 | 3 | 187 | 95 | 284 | 2.43e-12 | 65.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene26865.t1 | AT5G60860 | 92.130 | 216 | 17 | 0 | 1 | 216 | 1 | 216 | 4.89e-152 | 421 |
MS.gene26865.t1 | AT3G15060 | 88.479 | 217 | 25 | 0 | 1 | 217 | 1 | 217 | 1.90e-146 | 407 |
MS.gene26865.t1 | AT1G28550 | 86.697 | 218 | 28 | 1 | 1 | 217 | 1 | 218 | 8.95e-143 | 397 |
MS.gene26865.t1 | AT2G33870 | 85.714 | 217 | 30 | 1 | 1 | 216 | 1 | 217 | 2.00e-140 | 391 |
MS.gene26865.t1 | AT4G18430 | 82.488 | 217 | 38 | 0 | 1 | 217 | 1 | 217 | 7.59e-140 | 390 |
MS.gene26865.t1 | AT4G18800 | 82.028 | 217 | 34 | 2 | 1 | 216 | 1 | 213 | 4.00e-129 | 363 |
MS.gene26865.t1 | AT5G45750 | 80.645 | 217 | 39 | 2 | 1 | 216 | 1 | 215 | 2.27e-127 | 358 |
MS.gene26865.t1 | AT1G16920 | 77.419 | 217 | 46 | 2 | 1 | 216 | 1 | 215 | 1.22e-121 | 344 |
MS.gene26865.t1 | AT1G06400 | 74.194 | 217 | 53 | 2 | 1 | 216 | 1 | 215 | 1.42e-118 | 336 |
MS.gene26865.t1 | AT1G09630 | 67.742 | 217 | 66 | 2 | 3 | 217 | 2 | 216 | 9.73e-108 | 308 |
MS.gene26865.t1 | AT1G07410 | 66.047 | 215 | 69 | 2 | 3 | 216 | 2 | 213 | 3.10e-104 | 300 |
MS.gene26865.t1 | AT5G59150 | 66.055 | 218 | 67 | 3 | 3 | 216 | 2 | 216 | 4.13e-100 | 289 |
MS.gene26865.t1 | AT3G46830 | 65.138 | 218 | 69 | 3 | 4 | 217 | 3 | 217 | 7.59e-99 | 286 |
MS.gene26865.t1 | AT3G46830 | 65.138 | 218 | 69 | 3 | 4 | 217 | 3 | 217 | 7.59e-99 | 286 |
MS.gene26865.t1 | AT3G12160 | 61.722 | 209 | 74 | 2 | 11 | 215 | 13 | 219 | 2.43e-93 | 272 |
MS.gene26865.t1 | AT5G47960 | 63.507 | 211 | 68 | 3 | 11 | 215 | 13 | 220 | 1.58e-92 | 270 |
MS.gene26865.t1 | AT4G39990 | 58.095 | 210 | 84 | 3 | 11 | 217 | 15 | 223 | 2.57e-87 | 257 |
MS.gene26865.t1 | AT5G65270 | 57.075 | 212 | 86 | 1 | 11 | 217 | 15 | 226 | 1.26e-85 | 253 |
MS.gene26865.t1 | AT5G47520 | 54.955 | 222 | 94 | 3 | 1 | 217 | 1 | 221 | 5.33e-84 | 249 |
MS.gene26865.t1 | AT2G43130 | 55.093 | 216 | 88 | 3 | 6 | 216 | 2 | 213 | 5.40e-79 | 236 |
MS.gene26865.t1 | AT1G05810 | 56.604 | 212 | 83 | 3 | 11 | 217 | 10 | 217 | 9.23e-79 | 235 |
MS.gene26865.t1 | AT1G73640 | 59.574 | 188 | 75 | 1 | 7 | 193 | 7 | 194 | 9.32e-79 | 236 |
MS.gene26865.t1 | AT1G05810 | 55.405 | 222 | 88 | 4 | 3 | 217 | 46 | 263 | 1.99e-78 | 236 |
MS.gene26865.t1 | AT2G31680 | 54.067 | 209 | 94 | 1 | 11 | 217 | 10 | 218 | 1.19e-77 | 233 |
MS.gene26865.t1 | AT1G18200 | 60.571 | 175 | 69 | 0 | 7 | 181 | 7 | 181 | 2.14e-76 | 229 |
MS.gene26865.t1 | AT3G07410 | 55.072 | 207 | 92 | 1 | 11 | 216 | 10 | 216 | 7.14e-76 | 228 |
MS.gene26865.t1 | AT1G01200 | 56.132 | 212 | 88 | 3 | 11 | 217 | 26 | 237 | 4.43e-75 | 226 |
MS.gene26865.t1 | AT5G59150 | 62.048 | 166 | 56 | 3 | 55 | 216 | 3 | 165 | 7.72e-66 | 201 |
MS.gene26865.t1 | AT4G17170 | 46.411 | 209 | 110 | 1 | 10 | 216 | 3 | 211 | 1.68e-64 | 199 |
MS.gene26865.t1 | AT4G35860 | 44.498 | 209 | 114 | 1 | 10 | 216 | 3 | 211 | 6.55e-63 | 195 |
MS.gene26865.t1 | AT4G17160 | 44.660 | 206 | 110 | 1 | 10 | 215 | 3 | 204 | 3.89e-62 | 192 |
MS.gene26865.t1 | AT1G02130 | 45.972 | 211 | 103 | 2 | 7 | 216 | 2 | 202 | 3.07e-59 | 185 |
MS.gene26865.t1 | AT4G17530 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 6.68e-58 | 182 |
MS.gene26865.t1 | AT5G47200 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 1.20e-57 | 181 |
MS.gene26865.t1 | AT5G03520 | 44.907 | 216 | 107 | 4 | 5 | 216 | 7 | 214 | 1.40e-55 | 176 |
MS.gene26865.t1 | AT3G46060 | 44.811 | 212 | 104 | 4 | 9 | 215 | 11 | 214 | 3.10e-55 | 175 |
MS.gene26865.t1 | AT3G46060 | 44.811 | 212 | 104 | 4 | 9 | 215 | 11 | 214 | 3.10e-55 | 175 |
MS.gene26865.t1 | AT3G46060 | 44.811 | 212 | 104 | 4 | 9 | 215 | 11 | 214 | 3.10e-55 | 175 |
MS.gene26865.t1 | AT3G53610 | 43.396 | 212 | 107 | 3 | 9 | 215 | 11 | 214 | 7.32e-55 | 174 |
MS.gene26865.t1 | AT3G53610 | 43.396 | 212 | 107 | 3 | 9 | 215 | 11 | 214 | 7.32e-55 | 174 |
MS.gene26865.t1 | AT3G53610 | 43.396 | 212 | 107 | 3 | 9 | 215 | 11 | 214 | 7.32e-55 | 174 |
MS.gene26865.t1 | AT5G59840 | 43.458 | 214 | 108 | 4 | 9 | 217 | 11 | 216 | 1.11e-54 | 174 |
MS.gene26865.t1 | AT3G09900 | 43.519 | 216 | 112 | 3 | 5 | 216 | 7 | 216 | 3.76e-53 | 170 |
MS.gene26865.t1 | AT3G11730 | 42.857 | 210 | 109 | 3 | 8 | 215 | 3 | 203 | 3.92e-53 | 170 |
MS.gene26865.t1 | AT5G45130 | 40.594 | 202 | 107 | 3 | 15 | 216 | 12 | 200 | 8.86e-51 | 164 |
MS.gene26865.t1 | AT1G43890 | 46.739 | 184 | 95 | 3 | 1 | 182 | 1 | 183 | 8.66e-50 | 161 |
MS.gene26865.t1 | AT1G43890 | 46.739 | 184 | 95 | 3 | 1 | 182 | 1 | 183 | 8.66e-50 | 161 |
MS.gene26865.t1 | AT1G43890 | 46.739 | 184 | 95 | 3 | 1 | 182 | 1 | 183 | 8.66e-50 | 161 |
MS.gene26865.t1 | AT4G19640 | 44.785 | 163 | 90 | 0 | 15 | 177 | 12 | 174 | 9.05e-50 | 161 |
MS.gene26865.t1 | AT5G45130 | 40.500 | 200 | 106 | 3 | 17 | 216 | 22 | 208 | 1.41e-49 | 160 |
MS.gene26865.t1 | AT3G54840 | 46.012 | 163 | 87 | 1 | 15 | 176 | 35 | 197 | 1.79e-47 | 155 |
MS.gene26865.t1 | AT5G03530 | 41.892 | 222 | 111 | 6 | 1 | 216 | 1 | 210 | 3.32e-47 | 155 |
MS.gene26865.t1 | AT5G03530 | 41.892 | 222 | 111 | 6 | 1 | 216 | 1 | 210 | 3.32e-47 | 155 |
MS.gene26865.t1 | AT3G54840 | 45.679 | 162 | 87 | 1 | 16 | 176 | 2 | 163 | 5.48e-47 | 153 |
MS.gene26865.t1 | AT3G54840 | 47.403 | 154 | 80 | 1 | 15 | 167 | 35 | 188 | 6.11e-46 | 151 |
MS.gene26865.t1 | AT4G35860 | 40.854 | 164 | 95 | 1 | 55 | 216 | 2 | 165 | 5.16e-44 | 145 |
MS.gene26865.t1 | AT2G44610 | 33.679 | 193 | 110 | 1 | 14 | 206 | 10 | 184 | 1.72e-40 | 137 |
MS.gene26865.t1 | AT2G22290 | 36.306 | 157 | 100 | 0 | 14 | 170 | 10 | 166 | 3.73e-40 | 137 |
MS.gene26865.t1 | AT4G19640 | 47.328 | 131 | 69 | 0 | 15 | 145 | 12 | 142 | 1.28e-39 | 135 |
MS.gene26865.t1 | AT4G39890 | 36.709 | 158 | 99 | 1 | 14 | 170 | 10 | 167 | 1.71e-39 | 135 |
MS.gene26865.t1 | AT4G19640 | 46.875 | 128 | 68 | 0 | 15 | 142 | 12 | 139 | 3.31e-39 | 132 |
MS.gene26865.t1 | AT5G03520 | 41.040 | 173 | 90 | 4 | 48 | 216 | 40 | 204 | 4.43e-39 | 134 |
MS.gene26865.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 1.77e-38 | 132 |
MS.gene26865.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 1.77e-38 | 132 |
MS.gene26865.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 1.77e-38 | 132 |
MS.gene26865.t1 | AT5G10260 | 31.606 | 193 | 114 | 1 | 14 | 206 | 10 | 184 | 2.17e-38 | 132 |
MS.gene26865.t1 | AT1G22740 | 40.741 | 162 | 89 | 3 | 13 | 167 | 8 | 169 | 4.19e-38 | 131 |
MS.gene26865.t1 | AT3G18820 | 36.667 | 210 | 112 | 7 | 13 | 214 | 8 | 204 | 4.45e-38 | 131 |
MS.gene26865.t1 | AT1G52280 | 39.881 | 168 | 93 | 4 | 13 | 173 | 8 | 174 | 7.31e-38 | 130 |
MS.gene26865.t1 | AT3G09910 | 40.816 | 196 | 105 | 4 | 1 | 194 | 1 | 187 | 1.60e-37 | 129 |
MS.gene26865.t1 | AT3G09910 | 40.816 | 196 | 105 | 4 | 1 | 194 | 1 | 187 | 1.60e-37 | 129 |
MS.gene26865.t1 | AT2G21880 | 40.000 | 165 | 92 | 3 | 13 | 170 | 9 | 173 | 6.10e-37 | 129 |
MS.gene26865.t1 | AT5G64990 | 34.161 | 161 | 106 | 0 | 14 | 174 | 8 | 168 | 1.18e-36 | 127 |
MS.gene26865.t1 | AT3G16100 | 39.506 | 162 | 91 | 3 | 13 | 167 | 8 | 169 | 3.30e-36 | 126 |
MS.gene26865.t1 | AT5G46025 | 57.547 | 106 | 44 | 1 | 75 | 179 | 6 | 111 | 8.45e-36 | 122 |
MS.gene26865.t1 | AT4G09720 | 38.788 | 165 | 94 | 3 | 13 | 170 | 8 | 172 | 1.54e-35 | 125 |
MS.gene26865.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 4.86e-35 | 123 |
MS.gene26865.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 4.86e-35 | 123 |
MS.gene26865.t1 | AT4G09720 | 37.059 | 170 | 95 | 3 | 13 | 170 | 8 | 177 | 4.36e-34 | 121 |
MS.gene26865.t1 | AT5G64990 | 32.738 | 168 | 106 | 1 | 14 | 174 | 8 | 175 | 6.20e-34 | 120 |
MS.gene26865.t1 | AT5G39620 | 39.024 | 164 | 93 | 3 | 14 | 170 | 6 | 169 | 1.96e-33 | 119 |
MS.gene26865.t1 | AT4G09720 | 35.795 | 176 | 95 | 3 | 13 | 170 | 8 | 183 | 4.39e-33 | 119 |
MS.gene26865.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 6.99e-28 | 104 |
MS.gene26865.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 6.99e-28 | 104 |
MS.gene26865.t1 | AT2G21880 | 35.152 | 165 | 92 | 4 | 13 | 170 | 9 | 165 | 4.25e-27 | 103 |
MS.gene26865.t1 | AT5G20010 | 30.526 | 190 | 126 | 4 | 14 | 203 | 14 | 197 | 3.69e-26 | 101 |
MS.gene26865.t1 | AT5G20020 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 4.01e-26 | 100 |
MS.gene26865.t1 | AT5G55190 | 30.256 | 195 | 130 | 4 | 14 | 208 | 14 | 202 | 4.56e-26 | 100 |
MS.gene26865.t1 | AT5G55080 | 30.899 | 178 | 117 | 4 | 14 | 191 | 14 | 185 | 1.15e-25 | 99.8 |
MS.gene26865.t1 | AT4G09720 | 36.957 | 138 | 80 | 3 | 40 | 170 | 1 | 138 | 3.37e-24 | 94.7 |
MS.gene26865.t1 | AT4G09720 | 36.957 | 138 | 80 | 3 | 40 | 170 | 1 | 138 | 3.37e-24 | 94.7 |
MS.gene26865.t1 | AT4G09720 | 36.957 | 138 | 80 | 3 | 40 | 170 | 1 | 138 | 3.37e-24 | 94.7 |
MS.gene26865.t1 | AT2G44690 | 31.667 | 180 | 109 | 5 | 13 | 180 | 18 | 195 | 1.76e-21 | 88.6 |
MS.gene26865.t1 | AT4G08190 | 56.338 | 71 | 28 | 1 | 97 | 167 | 60 | 127 | 2.15e-20 | 83.6 |
MS.gene26865.t1 | AT4G35020 | 34.667 | 150 | 88 | 4 | 13 | 161 | 6 | 146 | 2.16e-20 | 85.5 |
MS.gene26865.t1 | AT4G35020 | 34.667 | 150 | 88 | 4 | 13 | 161 | 6 | 146 | 2.16e-20 | 85.5 |
MS.gene26865.t1 | AT4G35020 | 34.667 | 150 | 88 | 4 | 13 | 161 | 6 | 146 | 2.16e-20 | 85.5 |
MS.gene26865.t1 | AT4G28950 | 28.492 | 179 | 116 | 5 | 13 | 181 | 6 | 182 | 2.06e-19 | 83.2 |
MS.gene26865.t1 | AT3G48040 | 30.601 | 183 | 109 | 6 | 13 | 183 | 8 | 184 | 3.16e-19 | 82.4 |
MS.gene26865.t1 | AT5G45970 | 32.934 | 167 | 98 | 5 | 13 | 167 | 6 | 170 | 6.88e-19 | 81.6 |
MS.gene26865.t1 | AT1G75840 | 36.667 | 120 | 73 | 3 | 13 | 131 | 6 | 123 | 9.44e-19 | 80.9 |
MS.gene26865.t1 | AT1G20090 | 35.833 | 120 | 74 | 3 | 13 | 131 | 5 | 122 | 1.29e-18 | 80.5 |
MS.gene26865.t1 | AT5G62880 | 29.545 | 176 | 110 | 5 | 13 | 176 | 8 | 181 | 1.52e-18 | 80.9 |
MS.gene26865.t1 | AT3G51300 | 32.121 | 165 | 98 | 5 | 15 | 167 | 8 | 170 | 4.06e-18 | 79.3 |
MS.gene26865.t1 | AT2G17800 | 35.833 | 120 | 74 | 3 | 13 | 131 | 6 | 123 | 9.15e-18 | 78.6 |
MS.gene26865.t1 | AT2G17800 | 35.833 | 120 | 74 | 3 | 13 | 131 | 6 | 123 | 9.15e-18 | 78.6 |
MS.gene26865.t1 | AT4G35950 | 35.833 | 120 | 74 | 3 | 13 | 131 | 6 | 123 | 1.01e-17 | 78.2 |
MS.gene26865.t1 | AT3G48040 | 31.210 | 157 | 94 | 5 | 13 | 157 | 8 | 162 | 3.40e-17 | 76.6 |
MS.gene26865.t1 | AT4G35020 | 36.066 | 122 | 75 | 3 | 15 | 135 | 8 | 127 | 5.33e-17 | 75.1 |
MS.gene26865.t1 | AT4G35020 | 36.066 | 122 | 75 | 3 | 15 | 135 | 8 | 127 | 5.33e-17 | 75.1 |
MS.gene26865.t1 | AT5G62880 | 35.000 | 120 | 75 | 3 | 13 | 131 | 8 | 125 | 8.00e-17 | 75.9 |
Find 39 sgRNAs with CRISPR-Local
Find 120 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGGTTGTTAAAGCTCAGATT+TGG | 0.353549 | 4.1:-22286288 | MS.gene26865:CDS |
GTGGTATTGATTGGTGATTC+AGG | 0.360317 | 4.1:-22286421 | MS.gene26865:CDS |
CTATTCAAAGTGGTATTGAT+TGG | 0.383098 | 4.1:-22286430 | MS.gene26865:CDS |
CTATCGTGTGGTAAGCAAAA+AGG | 0.392175 | 4.1:-22285094 | MS.gene26865:CDS |
AAGCATTCATGTTGATGATA+AGG | 0.404191 | 4.1:-22286308 | MS.gene26865:CDS |
GGTTGTTAAAGCTCAGATTT+GGG | 0.406299 | 4.1:-22286287 | MS.gene26865:CDS |
ACATTAATCGTCTGTCCCTT+AGG | 0.435771 | 4.1:+22285039 | None:intergenic |
AACATCGTCGTGATGCTTGT+AGG | 0.462903 | 4.1:-22285264 | MS.gene26865:CDS |
GAAAGCACTTTCAACGTTCA+AGG | 0.472065 | 4.1:+22285137 | None:intergenic |
TTGATTGGTGATTCAGGTGT+TGG | 0.487252 | 4.1:-22286415 | MS.gene26865:CDS |
CCATGTTACATTTGAAAATG+TGG | 0.513693 | 4.1:-22285325 | MS.gene26865:CDS |
GCTTACTATCGTGGAGCTGT+TGG | 0.514723 | 4.1:-22285375 | MS.gene26865:CDS |
TGATCCAGCTGCTTTACCTA+AGG | 0.527209 | 4.1:-22285055 | MS.gene26865:CDS |
AGGGACAGACGATTAATGTT+GGG | 0.538607 | 4.1:-22285035 | MS.gene26865:CDS |
GTATCGGCTGTGAAGAAAGC+TGG | 0.539767 | 4.1:-22285000 | MS.gene26865:CDS |
GGGATACTGCTGGTCAAGAA+AGG | 0.539914 | 4.1:-22286267 | MS.gene26865:intron |
AAGGGACAGACGATTAATGT+TGG | 0.545050 | 4.1:-22285036 | MS.gene26865:CDS |
CATTTGAAAATGTGGAGAGA+TGG | 0.551036 | 4.1:-22285317 | MS.gene26865:CDS |
CTCGAATCTAAATCCACCAT+TGG | 0.555704 | 4.1:-22286349 | MS.gene26865:CDS |
CTGGATCATCACCAATCTCA+AGG | 0.559042 | 4.1:+22285070 | None:intergenic |
TTTCAACGTTCAAGGACTCA+AGG | 0.559306 | 4.1:+22285145 | None:intergenic |
GCTCAGATTTGGGATACTGC+TGG | 0.571910 | 4.1:-22286277 | MS.gene26865:CDS |
TGTCCCTTAGGTAAAGCAGC+TGG | 0.572395 | 4.1:+22285051 | None:intergenic |
AGTAAGCACTTGTAATTGCT+CGG | 0.574407 | 4.1:+22285391 | None:intergenic |
AGCGAATTCAACACCAATGG+TGG | 0.577629 | 4.1:+22286336 | None:intergenic |
TACAAGCATCACGACGATGT+TGG | 0.583030 | 4.1:+22285266 | None:intergenic |
TGGGTCCCGTGATGATGTAT+CGG | 0.586366 | 4.1:-22285016 | MS.gene26865:CDS |
CACAGCCGATACATCATCAC+GGG | 0.588334 | 4.1:+22285011 | None:intergenic |
TAGATAATCGTAATCATCGT+CGG | 0.591501 | 4.1:+22286450 | None:intergenic |
GATCCAGCTGCTTTACCTAA+GGG | 0.596088 | 4.1:-22285054 | MS.gene26865:CDS |
ATAGATCTGCGTCAACACTT+CGG | 0.604271 | 4.1:+22285113 | None:intergenic |
ATTACAAGTGCTTACTATCG+TGG | 0.615261 | 4.1:-22285384 | MS.gene26865:CDS |
TTACGATTATCTATTCAAAG+TGG | 0.630384 | 4.1:-22286440 | MS.gene26865:CDS |
TGGATCATCACCAATCTCAA+GGG | 0.633161 | 4.1:+22285071 | None:intergenic |
TTCAACGTTCAAGGACTCAA+GGG | 0.634550 | 4.1:+22285146 | None:intergenic |
AAACTGCTCGTAAATGACGC+AGG | 0.673148 | 4.1:+22285229 | None:intergenic |
TCACAGCCGATACATCATCA+CGG | 0.674525 | 4.1:+22285010 | None:intergenic |
AGTAGCGAATTCAACACCAA+TGG | 0.678218 | 4.1:+22286333 | None:intergenic |
GTTGACGCAGATCTATCGTG+TGG | 0.716753 | 4.1:-22285106 | MS.gene26865:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAAAGTTAATATTCCATTTT+TGG | - | chr4.1:22285831-22285850 | MS.gene26865:intron | 15.0% |
!! | AAAATGTAATTCACCAAAAA+TGG | + | chr4.1:22285847-22285866 | None:intergenic | 20.0% |
!! | TGTAGTAATTTATAGCAAAA+TGG | - | chr4.1:22285246-22285265 | MS.gene26865:CDS | 20.0% |
!!! | AAAAGTTGATAAAATACAGT+AGG | + | chr4.1:22285995-22286014 | None:intergenic | 20.0% |
!!! | AAAGTTGATAAAATACAGTA+GGG | + | chr4.1:22285994-22286013 | None:intergenic | 20.0% |
!!! | ATTTTTGGTGAATTACATTT+TGG | - | chr4.1:22285846-22285865 | MS.gene26865:intron | 20.0% |
!!! | TTGTAAGTTATTTGGTAATT+TGG | - | chr4.1:22285269-22285288 | MS.gene26865:CDS | 20.0% |
! | CAAAAAATTGTGGTTACAAA+CGG | + | chr4.1:22285662-22285681 | None:intergenic | 25.0% |
! | CAAAATGGTTGTAAGTTATT+TGG | - | chr4.1:22285261-22285280 | MS.gene26865:CDS | 25.0% |
! | CAATGCACTTAATTGTTAAA+CGG | - | chr4.1:22285714-22285733 | MS.gene26865:intron | 25.0% |
! | CATTAACTGTTGAATAATAG+AGG | - | chr4.1:22285303-22285322 | MS.gene26865:CDS | 25.0% |
! | GTTTAACAATTAAGTGCATT+GGG | + | chr4.1:22285715-22285734 | None:intergenic | 25.0% |
! | TAAACCTAATGATTAAGCAT+CGG | - | chr4.1:22285419-22285438 | MS.gene26865:intron | 25.0% |
! | TTACGATTATCTATTCAAAG+TGG | - | chr4.1:22285010-22285029 | MS.gene26865:CDS | 25.0% |
! | TTTGCTTCAAATCTACATTT+CGG | + | chr4.1:22285457-22285476 | None:intergenic | 25.0% |
!! | AGTTATTTGGTAATTTGGTT+AGG | - | chr4.1:22285274-22285293 | MS.gene26865:CDS | 25.0% |
!! | GTTATTTGGTAATTTGGTTA+GGG | - | chr4.1:22285275-22285294 | MS.gene26865:CDS | 25.0% |
!! | TTTTGATATTTTCATGTTGG+TGG | + | chr4.1:22285619-22285638 | None:intergenic | 25.0% |
!!! | GTAACCACAATTTTTTGATA+AGG | - | chr4.1:22285665-22285684 | MS.gene26865:intron | 25.0% |
AATTAGGATGAGGAAGTTAA+AGG | + | chr4.1:22285886-22285905 | None:intergenic | 30.0% | |
AATTGTTAAACGGTTTATCC+AGG | - | chr4.1:22285724-22285743 | MS.gene26865:intron | 30.0% | |
AGAAAAACTTGTAGCATCTT+CGG | + | chr4.1:22286250-22286269 | None:intergenic | 30.0% | |
AGGCTGTCAAATTACTAAAA+AGG | - | chr4.1:22285906-22285925 | MS.gene26865:intron | 30.0% | |
AGTAATTTGACAGCCTAATT+AGG | + | chr4.1:22285902-22285921 | None:intergenic | 30.0% | |
CCATGTTACATTTGAAAATG+TGG | - | chr4.1:22286125-22286144 | MS.gene26865:intron | 30.0% | |
CGTTTAACAATTAAGTGCAT+TGG | + | chr4.1:22285716-22285735 | None:intergenic | 30.0% | |
GTTGCCTTATCAAAAAATTG+TGG | + | chr4.1:22285672-22285691 | None:intergenic | 30.0% | |
TAGATAATCGTAATCATCGT+CGG | + | chr4.1:22285003-22285022 | None:intergenic | 30.0% | |
TTAACTTCCTCATCCTAATT+AGG | - | chr4.1:22285886-22285905 | MS.gene26865:intron | 30.0% | |
! | ACGGGAGAATACATATTTTA+TGG | - | chr4.1:22286272-22286291 | MS.gene26865:CDS | 30.0% |
! | ATGCTACAAGTTTTTCTGAA+CGG | - | chr4.1:22286253-22286272 | MS.gene26865:intron | 30.0% |
! | ATTTTCAAATGTAACATGGC+GGG | + | chr4.1:22286124-22286143 | None:intergenic | 30.0% |
! | CATTTTCAAATGTAACATGG+CGG | + | chr4.1:22286125-22286144 | None:intergenic | 30.0% |
! | CCACATTTTCAAATGTAACA+TGG | + | chr4.1:22286128-22286147 | None:intergenic | 30.0% |
!! | AAGCATTCATGTTGATGATA+AGG | - | chr4.1:22285142-22285161 | MS.gene26865:CDS | 30.0% |
!! | CGGTTTTGATATTTTCATGT+TGG | + | chr4.1:22285622-22285641 | None:intergenic | 30.0% |
!! | CTATTCAAAGTGGTATTGAT+TGG | - | chr4.1:22285020-22285039 | MS.gene26865:CDS | 30.0% |
!!! | AGTTTGCTTTTTTTCACTGA+AGG | - | chr4.1:22286034-22286053 | MS.gene26865:intron | 30.0% |
AACAATTAAGTGCATTGGGT+GGG | + | chr4.1:22285711-22285730 | None:intergenic | 35.0% | |
ACTTTCATTTCAGCCATTCA+TGG | + | chr4.1:22285374-22285393 | None:intergenic | 35.0% | |
AGGGTAGATCATTAGTAACA+TGG | + | chr4.1:22285975-22285994 | None:intergenic | 35.0% | |
AGGTTGTTAAAGCTCAGATT+TGG | - | chr4.1:22285162-22285181 | MS.gene26865:CDS | 35.0% | |
AGTAAGCACTTGTAATTGCT+CGG | + | chr4.1:22286062-22286081 | None:intergenic | 35.0% | |
ATTACAAGTGCTTACTATCG+TGG | - | chr4.1:22286066-22286085 | MS.gene26865:intron | 35.0% | |
CATTTGAAAATGTGGAGAGA+TGG | - | chr4.1:22286133-22286152 | MS.gene26865:intron | 35.0% | |
CTGCTATTACGAATGTCATT+TGG | - | chr4.1:22285344-22285363 | MS.gene26865:CDS | 35.0% | |
GGTTGTTAAAGCTCAGATTT+GGG | - | chr4.1:22285163-22285182 | MS.gene26865:CDS | 35.0% | |
TAACAATTAAGTGCATTGGG+TGG | + | chr4.1:22285712-22285731 | None:intergenic | 35.0% | |
! | TGCTACAAGTTTTTCTGAAC+GGG | - | chr4.1:22286254-22286273 | MS.gene26865:intron | 35.0% |
! | TTCGAGACTGAATTCGTTTT+TGG | + | chr4.1:22285087-22285106 | None:intergenic | 35.0% |
AAGGGACAGACGATTAATGT+TGG | - | chr4.1:22286414-22286433 | MS.gene26865:CDS | 40.0% | |
ACATTAATCGTCTGTCCCTT+AGG | + | chr4.1:22286414-22286433 | None:intergenic | 40.0% | |
AGGGACAGACGATTAATGTT+GGG | - | chr4.1:22286415-22286434 | MS.gene26865:CDS | 40.0% | |
AGTAGCGAATTCAACACCAA+TGG | + | chr4.1:22285120-22285139 | None:intergenic | 40.0% | |
ATAGATCTGCGTCAACACTT+CGG | + | chr4.1:22286340-22286359 | None:intergenic | 40.0% | |
CTATCGTGTGGTAAGCAAAA+AGG | - | chr4.1:22286356-22286375 | MS.gene26865:CDS | 40.0% | |
CTCGAATCTAAATCCACCAT+TGG | - | chr4.1:22285101-22285120 | MS.gene26865:CDS | 40.0% | |
TAAACGGTTTATCCAGGTTG+CGG | - | chr4.1:22285730-22285749 | MS.gene26865:intron | 40.0% | |
TGGATCATCACCAATCTCAA+GGG | + | chr4.1:22286382-22286401 | None:intergenic | 40.0% | |
TTCAACGTTCAAGGACTCAA+GGG | + | chr4.1:22286307-22286326 | None:intergenic | 40.0% | |
TTGACAGCCTAATTAGGATG+AGG | + | chr4.1:22285896-22285915 | None:intergenic | 40.0% | |
TTGTCGAGCATTCTCACTTA+GGG | + | chr4.1:22285778-22285797 | None:intergenic | 40.0% | |
TTTCAACGTTCAAGGACTCA+AGG | + | chr4.1:22286308-22286327 | None:intergenic | 40.0% | |
! | TTGATTGGTGATTCAGGTGT+TGG | - | chr4.1:22285035-22285054 | MS.gene26865:CDS | 40.0% |
!! | CCTAATGATTAAGCATCGGT+CGG | - | chr4.1:22285423-22285442 | MS.gene26865:intron | 40.0% |
!! | GAAAGCACTTTCAACGTTCA+AGG | + | chr4.1:22286316-22286335 | None:intergenic | 40.0% |
!! | GTGGTATTGATTGGTGATTC+AGG | - | chr4.1:22285029-22285048 | MS.gene26865:CDS | 40.0% |
!!! | TGCATTGGGTGGGTTATTTT+GGG | + | chr4.1:22285701-22285720 | None:intergenic | 40.0% |
AAACTGCTCGTAAATGACGC+AGG | + | chr4.1:22286224-22286243 | None:intergenic | 45.0% | |
AACATCGTCGTGATGCTTGT+AGG | - | chr4.1:22286186-22286205 | MS.gene26865:intron | 45.0% | |
AGCAAAAAGGCCCTTGAGAT+TGG | - | chr4.1:22286369-22286388 | MS.gene26865:CDS | 45.0% | |
AGCAAGCTTGTGGTTTAGTC+GGG | - | chr4.1:22285511-22285530 | MS.gene26865:intron | 45.0% | |
AGCGAATTCAACACCAATGG+TGG | + | chr4.1:22285117-22285136 | None:intergenic | 45.0% | |
CCGACCGATGCTTAATCATT+AGG | + | chr4.1:22285426-22285445 | None:intergenic | 45.0% | |
CGAAACTGGGTGCATATTTC+AGG | + | chr4.1:22285487-22285506 | None:intergenic | 45.0% | |
CTGGATCATCACCAATCTCA+AGG | + | chr4.1:22286383-22286402 | None:intergenic | 45.0% | |
CTTGTCGAGCATTCTCACTT+AGG | + | chr4.1:22285779-22285798 | None:intergenic | 45.0% | |
GAGCAAGCTTGTGGTTTAGT+CGG | - | chr4.1:22285510-22285529 | MS.gene26865:intron | 45.0% | |
TACAAACGGTTGAACGTGGT+CGG | + | chr4.1:22285648-22285667 | None:intergenic | 45.0% | |
TACAAGCATCACGACGATGT+TGG | + | chr4.1:22286187-22286206 | None:intergenic | 45.0% | |
TCACAGCCGATACATCATCA+CGG | + | chr4.1:22286443-22286462 | None:intergenic | 45.0% | |
TGGTTACAAACGGTTGAACG+TGG | + | chr4.1:22285652-22285671 | None:intergenic | 45.0% | |
TGTCGAGCATTCTCACTTAG+GGG | + | chr4.1:22285777-22285796 | None:intergenic | 45.0% | |
! | GACTAAACCACAAGCTTGCT+CGG | + | chr4.1:22285511-22285530 | None:intergenic | 45.0% |
! | GATCCAGCTGCTTTACCTAA+GGG | - | chr4.1:22286396-22286415 | MS.gene26865:CDS | 45.0% |
! | GGGTGCATATTTCAGGTCAT+CGG | + | chr4.1:22285480-22285499 | None:intergenic | 45.0% |
! | GTCATTTGGAGTGCCATGAA+TGG | - | chr4.1:22285358-22285377 | MS.gene26865:CDS | 45.0% |
! | TGATCCAGCTGCTTTACCTA+AGG | - | chr4.1:22286395-22286414 | MS.gene26865:CDS | 45.0% |
!!! | GATTAAGCATCGGTCGGTTT+TGG | - | chr4.1:22285429-22285448 | MS.gene26865:intron | 45.0% |
!!! | GTGCATTGGGTGGGTTATTT+TGG | + | chr4.1:22285702-22285721 | None:intergenic | 45.0% |
CACAGCCGATACATCATCAC+GGG | + | chr4.1:22286442-22286461 | None:intergenic | 50.0% | |
GCTTACTATCGTGGAGCTGT+TGG | - | chr4.1:22286075-22286094 | MS.gene26865:intron | 50.0% | |
GGGATACTGCTGGTCAAGAA+AGG | - | chr4.1:22285183-22285202 | MS.gene26865:CDS | 50.0% | |
GTTGACGCAGATCTATCGTG+TGG | - | chr4.1:22286344-22286363 | MS.gene26865:CDS | 50.0% | |
TGTCCCTTAGGTAAAGCAGC+TGG | + | chr4.1:22286402-22286421 | None:intergenic | 50.0% | |
! | AAGCTTGCTCGGTCGAAACT+GGG | + | chr4.1:22285500-22285519 | None:intergenic | 50.0% |
! | ATTCTCTGTGCGGTCGGTTT+GGG | - | chr4.1:22285590-22285609 | MS.gene26865:intron | 50.0% |
! | GCTCAGATTTGGGATACTGC+TGG | - | chr4.1:22285173-22285192 | MS.gene26865:CDS | 50.0% |
! | TGGGTCCCGTGATGATGTAT+CGG | - | chr4.1:22286434-22286453 | MS.gene26865:CDS | 50.0% |
! | TTTGCACGGGAGGGTTTGTT+TGG | - | chr4.1:22285556-22285575 | MS.gene26865:intron | 50.0% |
!! | GTATCGGCTGTGAAGAAAGC+TGG | - | chr4.1:22286450-22286469 | MS.gene26865:CDS | 50.0% |
!!! | GGGTGGGTTATTTTGGGCTT+CGG | + | chr4.1:22285695-22285714 | None:intergenic | 50.0% |
!!! | GGTGGGTTATTTTGGGCTTC+GGG | + | chr4.1:22285694-22285713 | None:intergenic | 50.0% |
AGCGGAGAAGCTGTTTGCAC+GGG | - | chr4.1:22285543-22285562 | MS.gene26865:intron | 55.0% | |
CAGCGGAGAAGCTGTTTGCA+CGG | - | chr4.1:22285542-22285561 | MS.gene26865:intron | 55.0% | |
CATTCTCTGTGCGGTCGGTT+TGG | - | chr4.1:22285589-22285608 | MS.gene26865:intron | 55.0% | |
CGACACATTCTCTGTGCGGT+CGG | - | chr4.1:22285584-22285603 | MS.gene26865:intron | 55.0% | |
CGACCGCACAGAGAATGTGT+CGG | + | chr4.1:22285586-22285605 | None:intergenic | 55.0% | |
CTTGTGGTTTAGTCGGGTGC+GGG | - | chr4.1:22285517-22285536 | MS.gene26865:intron | 55.0% | |
GACCGCACAGAGAATGTGTC+GGG | + | chr4.1:22285585-22285604 | None:intergenic | 55.0% | |
GAGAAGCTGTTTGCACGGGA+GGG | - | chr4.1:22285547-22285566 | MS.gene26865:intron | 55.0% | |
GCTTGTGGTTTAGTCGGGTG+CGG | - | chr4.1:22285516-22285535 | MS.gene26865:intron | 55.0% | |
GTTTCGACCGAGCAAGCTTG+TGG | - | chr4.1:22285501-22285520 | MS.gene26865:intron | 55.0% | |
TATCCAGGTTGCGGTCGTCT+CGG | - | chr4.1:22285739-22285758 | MS.gene26865:intron | 55.0% | |
TGCCCGACACATTCTCTGTG+CGG | - | chr4.1:22285580-22285599 | MS.gene26865:intron | 55.0% | |
! | CAAGCTTGCTCGGTCGAAAC+TGG | + | chr4.1:22285501-22285520 | None:intergenic | 55.0% |
GGAGAAGCTGTTTGCACGGG+AGG | - | chr4.1:22285546-22285565 | MS.gene26865:intron | 60.0% | |
TTAGTCGGGTGCGGGTTCAG+CGG | - | chr4.1:22285525-22285544 | MS.gene26865:intron | 60.0% | |
! | CGGTTGAACGTGGTCGGCTT+CGG | + | chr4.1:22285642-22285661 | None:intergenic | 60.0% |
ACACCGAGACGACCGCAACC+TGG | + | chr4.1:22285745-22285764 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 22284984 | 22286488 | 22284984 | ID=MS.gene26865 |
chr4.1 | mRNA | 22284984 | 22286488 | 22284984 | ID=MS.gene26865.t1;Parent=MS.gene26865 |
chr4.1 | exon | 22286268 | 22286488 | 22286268 | ID=MS.gene26865.t1.exon1;Parent=MS.gene26865.t1 |
chr4.1 | CDS | 22286268 | 22286488 | 22286268 | ID=cds.MS.gene26865.t1;Parent=MS.gene26865.t1 |
chr4.1 | exon | 22284984 | 22285416 | 22284984 | ID=MS.gene26865.t1.exon2;Parent=MS.gene26865.t1 |
chr4.1 | CDS | 22284984 | 22285416 | 22284984 | ID=cds.MS.gene26865.t1;Parent=MS.gene26865.t1 |
Gene Sequence |
Protein sequence |