Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031648.t1 | XP_003607539.1 | 100 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 2.10E-116 | 428.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031648.t1 | Q9FJH0 | 94.4 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 1.8e-113 | 409.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031648.t1 | G7JUZ6 | 100.0 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.5e-116 | 428.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031648.t1 | MTR_4g079350 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.29e-161 | 445 |
MS.gene031648.t1 | MTR_4g088090 | 94.009 | 217 | 13 | 0 | 1 | 217 | 1 | 217 | 1.64e-154 | 427 |
MS.gene031648.t1 | MTR_2g014990 | 93.548 | 217 | 14 | 0 | 1 | 217 | 1 | 217 | 7.08e-153 | 423 |
MS.gene031648.t1 | MTR_2g090865 | 80.556 | 216 | 39 | 2 | 1 | 216 | 1 | 213 | 8.80e-128 | 359 |
MS.gene031648.t1 | MTR_2g075950 | 76.256 | 219 | 48 | 3 | 1 | 217 | 1 | 217 | 4.93e-124 | 350 |
MS.gene031648.t1 | MTR_2g083860 | 73.516 | 219 | 53 | 2 | 1 | 216 | 1 | 217 | 4.90e-116 | 330 |
MS.gene031648.t1 | MTR_3g069510 | 67.130 | 216 | 67 | 2 | 3 | 216 | 2 | 215 | 1.55e-106 | 305 |
MS.gene031648.t1 | MTR_2g005510 | 65.581 | 215 | 69 | 2 | 6 | 217 | 8 | 220 | 3.10e-105 | 302 |
MS.gene031648.t1 | MTR_4g064897 | 67.593 | 216 | 65 | 3 | 3 | 216 | 2 | 214 | 1.62e-104 | 300 |
MS.gene031648.t1 | MTR_1g052475 | 61.905 | 210 | 75 | 2 | 11 | 215 | 13 | 222 | 3.34e-93 | 272 |
MS.gene031648.t1 | MTR_8g089985 | 58.796 | 216 | 85 | 1 | 6 | 217 | 10 | 225 | 2.84e-88 | 259 |
MS.gene031648.t1 | MTR_0262s0050 | 60.190 | 211 | 78 | 3 | 11 | 217 | 13 | 221 | 3.03e-88 | 259 |
MS.gene031648.t1 | MTR_6g079550 | 57.277 | 213 | 87 | 2 | 7 | 217 | 6 | 216 | 4.33e-88 | 259 |
MS.gene031648.t1 | MTR_3g086980 | 55.814 | 215 | 88 | 2 | 6 | 215 | 9 | 221 | 8.09e-86 | 253 |
MS.gene031648.t1 | MTR_8g027220 | 56.019 | 216 | 93 | 1 | 4 | 217 | 17 | 232 | 1.53e-85 | 253 |
MS.gene031648.t1 | MTR_1g078200 | 56.604 | 212 | 86 | 3 | 11 | 216 | 12 | 223 | 5.27e-80 | 239 |
MS.gene031648.t1 | MTR_7g405790 | 57.005 | 207 | 87 | 1 | 12 | 216 | 14 | 220 | 8.24e-80 | 238 |
MS.gene031648.t1 | MTR_8g036220 | 51.982 | 227 | 98 | 4 | 1 | 216 | 1 | 227 | 1.15e-77 | 233 |
MS.gene031648.t1 | MTR_7g051940 | 55.769 | 208 | 85 | 2 | 12 | 216 | 12 | 215 | 3.47e-76 | 229 |
MS.gene031648.t1 | MTR_8g107070 | 56.731 | 208 | 85 | 2 | 7 | 211 | 8 | 213 | 4.40e-75 | 228 |
MS.gene031648.t1 | MTR_7g117910 | 49.315 | 219 | 91 | 3 | 3 | 217 | 10 | 212 | 3.44e-68 | 208 |
MS.gene031648.t1 | MTR_2g027660 | 47.143 | 210 | 107 | 2 | 10 | 216 | 3 | 211 | 2.00e-64 | 199 |
MS.gene031648.t1 | MTR_6g021790 | 44.131 | 213 | 109 | 3 | 10 | 216 | 3 | 211 | 2.15e-61 | 191 |
MS.gene031648.t1 | MTR_7g081700 | 46.445 | 211 | 103 | 1 | 7 | 217 | 2 | 202 | 4.22e-60 | 187 |
MS.gene031648.t1 | MTR_8g006970 | 46.635 | 208 | 100 | 2 | 11 | 217 | 20 | 217 | 1.48e-57 | 181 |
MS.gene031648.t1 | MTR_8g031660 | 46.190 | 210 | 104 | 4 | 10 | 216 | 3 | 206 | 3.20e-57 | 180 |
MS.gene031648.t1 | MTR_1g068730 | 44.954 | 218 | 107 | 5 | 5 | 217 | 7 | 216 | 2.99e-56 | 178 |
MS.gene031648.t1 | MTR_1g115325 | 44.340 | 212 | 105 | 4 | 9 | 215 | 11 | 214 | 1.30e-55 | 176 |
MS.gene031648.t1 | MTR_1g068740 | 44.495 | 218 | 108 | 5 | 5 | 217 | 7 | 216 | 1.41e-55 | 176 |
MS.gene031648.t1 | MTR_8g006970 | 53.012 | 166 | 78 | 0 | 9 | 174 | 4 | 169 | 1.03e-54 | 173 |
MS.gene031648.t1 | MTR_7g100020 | 45.327 | 214 | 104 | 5 | 9 | 217 | 11 | 216 | 5.51e-54 | 172 |
MS.gene031648.t1 | MTR_8g031870 | 51.266 | 158 | 77 | 0 | 12 | 169 | 5 | 162 | 1.33e-53 | 170 |
MS.gene031648.t1 | MTR_8g031680 | 40.670 | 209 | 121 | 2 | 10 | 216 | 3 | 210 | 2.17e-53 | 171 |
MS.gene031648.t1 | MTR_2g005500 | 42.654 | 211 | 110 | 2 | 6 | 215 | 2 | 202 | 1.08e-51 | 166 |
MS.gene031648.t1 | MTR_4g063160 | 42.925 | 212 | 109 | 5 | 9 | 215 | 11 | 215 | 4.96e-50 | 162 |
MS.gene031648.t1 | MTR_2g096550 | 39.631 | 217 | 116 | 4 | 4 | 215 | 6 | 212 | 1.09e-49 | 161 |
MS.gene031648.t1 | MTR_3g064390 | 39.806 | 206 | 103 | 3 | 15 | 216 | 12 | 200 | 1.97e-49 | 160 |
MS.gene031648.t1 | MTR_8g031830 | 49.673 | 153 | 77 | 0 | 12 | 164 | 5 | 157 | 2.69e-49 | 159 |
MS.gene031648.t1 | MTR_5g076590 | 38.614 | 202 | 111 | 2 | 15 | 216 | 12 | 200 | 1.32e-48 | 158 |
MS.gene031648.t1 | MTR_1g068730 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 1.96e-47 | 154 |
MS.gene031648.t1 | MTR_1g094220 | 45.399 | 163 | 88 | 1 | 15 | 176 | 33 | 195 | 2.44e-47 | 155 |
MS.gene031648.t1 | MTR_1g068740 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 2.62e-47 | 154 |
MS.gene031648.t1 | MTR_8g093740 | 40.455 | 220 | 114 | 5 | 1 | 215 | 1 | 208 | 5.42e-47 | 154 |
MS.gene031648.t1 | MTR_1g094220 | 45.570 | 158 | 85 | 1 | 15 | 171 | 33 | 190 | 4.59e-46 | 152 |
MS.gene031648.t1 | MTR_3g096350 | 41.981 | 212 | 106 | 5 | 9 | 215 | 8 | 207 | 2.14e-45 | 150 |
MS.gene031648.t1 | MTR_1g094220 | 46.753 | 154 | 81 | 1 | 15 | 167 | 33 | 186 | 2.51e-45 | 150 |
MS.gene031648.t1 | MTR_1g029450 | 42.932 | 191 | 95 | 4 | 9 | 197 | 13 | 191 | 2.58e-45 | 150 |
MS.gene031648.t1 | MTR_1g094220 | 43.575 | 179 | 91 | 2 | 15 | 192 | 33 | 202 | 5.37e-45 | 150 |
MS.gene031648.t1 | MTR_2g102060 | 37.931 | 203 | 110 | 3 | 15 | 216 | 12 | 199 | 8.57e-45 | 148 |
MS.gene031648.t1 | MTR_4g099470 | 42.529 | 174 | 90 | 1 | 44 | 217 | 15 | 178 | 2.16e-44 | 146 |
MS.gene031648.t1 | MTR_7g103070 | 41.315 | 213 | 108 | 4 | 10 | 216 | 13 | 214 | 2.92e-44 | 147 |
MS.gene031648.t1 | MTR_1g090717 | 46.893 | 177 | 91 | 3 | 6 | 179 | 8 | 184 | 1.23e-43 | 145 |
MS.gene031648.t1 | MTR_1g062760 | 42.453 | 212 | 104 | 6 | 10 | 215 | 11 | 210 | 4.51e-43 | 144 |
MS.gene031648.t1 | MTR_5g013900 | 34.715 | 193 | 108 | 1 | 14 | 206 | 10 | 184 | 9.05e-42 | 140 |
MS.gene031648.t1 | MTR_8g103550 | 39.645 | 169 | 101 | 1 | 15 | 182 | 11 | 179 | 1.03e-41 | 140 |
MS.gene031648.t1 | MTR_4g098950 | 33.161 | 193 | 111 | 1 | 14 | 206 | 10 | 184 | 1.19e-40 | 138 |
MS.gene031648.t1 | MTR_3g087160 | 36.306 | 157 | 100 | 0 | 14 | 170 | 10 | 166 | 6.80e-39 | 133 |
MS.gene031648.t1 | MTR_8g090215 | 32.124 | 193 | 113 | 1 | 14 | 206 | 10 | 184 | 8.30e-39 | 133 |
MS.gene031648.t1 | MTR_2g101890 | 41.071 | 168 | 91 | 4 | 13 | 173 | 10 | 176 | 1.07e-37 | 130 |
MS.gene031648.t1 | MTR_8g092020 | 41.975 | 162 | 87 | 3 | 13 | 167 | 12 | 173 | 1.56e-37 | 130 |
MS.gene031648.t1 | MTR_4g069850 | 35.238 | 210 | 115 | 7 | 13 | 214 | 8 | 204 | 1.76e-37 | 130 |
MS.gene031648.t1 | MTR_4g012940 | 40.741 | 162 | 89 | 3 | 13 | 167 | 8 | 169 | 9.40e-37 | 128 |
MS.gene031648.t1 | MTR_3g064390 | 45.600 | 125 | 68 | 0 | 15 | 139 | 12 | 136 | 1.07e-36 | 126 |
MS.gene031648.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 1.25e-36 | 125 |
MS.gene031648.t1 | MTR_1g097420 | 35.204 | 196 | 120 | 3 | 13 | 201 | 8 | 203 | 1.65e-36 | 127 |
MS.gene031648.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 2.35e-36 | 125 |
MS.gene031648.t1 | MTR_6g039490 | 38.889 | 162 | 92 | 3 | 13 | 167 | 8 | 169 | 5.10e-33 | 119 |
MS.gene031648.t1 | MTR_1g069245 | 65.263 | 95 | 29 | 2 | 26 | 120 | 109 | 199 | 8.70e-33 | 118 |
MS.gene031648.t1 | MTR_8g093740 | 38.983 | 177 | 92 | 4 | 44 | 215 | 10 | 175 | 4.47e-32 | 115 |
MS.gene031648.t1 | MTR_1g097420 | 31.193 | 218 | 116 | 4 | 13 | 196 | 8 | 225 | 2.24e-30 | 112 |
MS.gene031648.t1 | MTR_7g103070 | 39.286 | 168 | 85 | 4 | 55 | 216 | 2 | 158 | 2.83e-30 | 110 |
MS.gene031648.t1 | MTR_2g078000 | 87.755 | 49 | 6 | 0 | 74 | 122 | 46 | 94 | 9.67e-26 | 96.7 |
MS.gene031648.t1 | MTR_3g107713 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.50e-24 | 96.7 |
MS.gene031648.t1 | MTR_3g107707 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.50e-24 | 96.7 |
MS.gene031648.t1 | MTR_3g107717 | 30.481 | 187 | 124 | 4 | 14 | 200 | 14 | 194 | 3.42e-24 | 95.9 |
MS.gene031648.t1 | MTR_2g005500 | 31.959 | 194 | 91 | 2 | 6 | 198 | 2 | 155 | 1.33e-22 | 90.1 |
MS.gene031648.t1 | MTR_8g031810 | 43.689 | 103 | 44 | 1 | 12 | 114 | 5 | 93 | 6.67e-22 | 86.3 |
MS.gene031648.t1 | MTR_2g078560 | 84.783 | 46 | 7 | 0 | 75 | 120 | 54 | 99 | 1.33e-20 | 88.2 |
MS.gene031648.t1 | MTR_4g088055 | 34.667 | 150 | 88 | 4 | 13 | 161 | 6 | 146 | 4.15e-20 | 84.7 |
MS.gene031648.t1 | MTR_4g073250 | 34.000 | 150 | 89 | 4 | 13 | 161 | 6 | 146 | 4.24e-20 | 84.7 |
MS.gene031648.t1 | MTR_1452s0010 | 43.038 | 79 | 45 | 0 | 33 | 111 | 1 | 79 | 5.22e-20 | 81.6 |
MS.gene031648.t1 | MTR_6g087980 | 37.500 | 128 | 77 | 3 | 13 | 139 | 6 | 131 | 9.56e-20 | 84.0 |
MS.gene031648.t1 | MTR_2g090875 | 36.567 | 134 | 82 | 3 | 13 | 145 | 6 | 137 | 2.11e-19 | 82.8 |
MS.gene031648.t1 | MTR_5g022600 | 35.606 | 132 | 82 | 3 | 13 | 143 | 6 | 135 | 4.07e-19 | 82.0 |
MS.gene031648.t1 | MTR_4g113620 | 26.425 | 193 | 127 | 5 | 14 | 206 | 14 | 191 | 4.19e-19 | 82.4 |
MS.gene031648.t1 | MTR_8g075240 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 6.72e-19 | 81.3 |
MS.gene031648.t1 | MTR_3g078260 | 28.177 | 181 | 116 | 5 | 13 | 181 | 8 | 186 | 1.18e-17 | 78.2 |
MS.gene031648.t1 | MTR_3g053480 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 1.01e-15 | 69.3 |
MS.gene031648.t1 | MTR_1g059590 | 33.140 | 172 | 105 | 5 | 10 | 181 | 428 | 589 | 1.75e-15 | 75.1 |
MS.gene031648.t1 | MTR_1g059590 | 33.140 | 172 | 105 | 5 | 10 | 181 | 395 | 556 | 1.84e-15 | 74.7 |
MS.gene031648.t1 | MTR_1686s0010 | 33.696 | 92 | 61 | 0 | 33 | 124 | 1 | 92 | 2.33e-15 | 69.3 |
MS.gene031648.t1 | MTR_3g078260 | 33.621 | 116 | 74 | 3 | 13 | 127 | 8 | 121 | 6.26e-15 | 69.7 |
MS.gene031648.t1 | MTR_8g099250 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 3.61e-14 | 65.5 |
MS.gene031648.t1 | MTR_5g092060 | 25.521 | 192 | 134 | 4 | 3 | 187 | 95 | 284 | 8.04e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031648.t1 | AT5G60860 | 94.444 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 3.29e-154 | 426 |
MS.gene031648.t1 | AT3G15060 | 89.862 | 217 | 22 | 0 | 1 | 217 | 1 | 217 | 7.14e-148 | 410 |
MS.gene031648.t1 | AT1G28550 | 88.532 | 218 | 24 | 1 | 1 | 217 | 1 | 218 | 2.51e-144 | 401 |
MS.gene031648.t1 | AT2G33870 | 86.175 | 217 | 29 | 1 | 1 | 216 | 1 | 217 | 8.40e-140 | 390 |
MS.gene031648.t1 | AT4G18430 | 81.567 | 217 | 40 | 0 | 1 | 217 | 1 | 217 | 5.78e-138 | 385 |
MS.gene031648.t1 | AT4G18800 | 79.263 | 217 | 40 | 2 | 1 | 216 | 1 | 213 | 4.92e-127 | 357 |
MS.gene031648.t1 | AT5G45750 | 77.880 | 217 | 45 | 2 | 1 | 216 | 1 | 215 | 7.57e-125 | 352 |
MS.gene031648.t1 | AT1G16920 | 75.115 | 217 | 51 | 2 | 1 | 216 | 1 | 215 | 9.30e-121 | 342 |
MS.gene031648.t1 | AT1G06400 | 72.811 | 217 | 56 | 2 | 1 | 216 | 1 | 215 | 1.52e-118 | 336 |
MS.gene031648.t1 | AT1G09630 | 66.359 | 217 | 69 | 2 | 3 | 217 | 2 | 216 | 3.20e-106 | 305 |
MS.gene031648.t1 | AT1G07410 | 64.186 | 215 | 73 | 2 | 3 | 216 | 2 | 213 | 7.48e-102 | 294 |
MS.gene031648.t1 | AT5G59150 | 64.679 | 218 | 70 | 3 | 3 | 216 | 2 | 216 | 1.92e-98 | 285 |
MS.gene031648.t1 | AT3G46830 | 63.303 | 218 | 73 | 3 | 4 | 217 | 3 | 217 | 5.30e-97 | 281 |
MS.gene031648.t1 | AT3G46830 | 63.303 | 218 | 73 | 3 | 4 | 217 | 3 | 217 | 5.30e-97 | 281 |
MS.gene031648.t1 | AT5G47960 | 64.455 | 211 | 66 | 3 | 11 | 215 | 13 | 220 | 2.90e-93 | 272 |
MS.gene031648.t1 | AT3G12160 | 61.244 | 209 | 75 | 2 | 11 | 215 | 13 | 219 | 9.29e-92 | 268 |
MS.gene031648.t1 | AT4G39990 | 59.524 | 210 | 81 | 3 | 11 | 217 | 15 | 223 | 9.24e-89 | 261 |
MS.gene031648.t1 | AT5G47520 | 56.757 | 222 | 90 | 3 | 1 | 217 | 1 | 221 | 6.68e-85 | 251 |
MS.gene031648.t1 | AT5G65270 | 56.604 | 212 | 87 | 1 | 11 | 217 | 15 | 226 | 1.66e-84 | 250 |
MS.gene031648.t1 | AT1G05810 | 58.019 | 212 | 80 | 3 | 11 | 217 | 10 | 217 | 9.11e-80 | 238 |
MS.gene031648.t1 | AT2G43130 | 55.556 | 216 | 87 | 3 | 6 | 216 | 2 | 213 | 1.21e-79 | 237 |
MS.gene031648.t1 | AT1G05810 | 56.757 | 222 | 85 | 4 | 3 | 217 | 46 | 263 | 1.83e-79 | 239 |
MS.gene031648.t1 | AT2G31680 | 55.502 | 209 | 91 | 1 | 11 | 217 | 10 | 218 | 3.69e-79 | 236 |
MS.gene031648.t1 | AT1G73640 | 52.444 | 225 | 91 | 4 | 7 | 215 | 7 | 231 | 2.57e-78 | 234 |
MS.gene031648.t1 | AT3G07410 | 57.005 | 207 | 88 | 1 | 11 | 216 | 10 | 216 | 4.75e-78 | 233 |
MS.gene031648.t1 | AT1G01200 | 57.075 | 212 | 86 | 3 | 11 | 217 | 26 | 237 | 2.74e-75 | 227 |
MS.gene031648.t1 | AT1G18200 | 57.459 | 181 | 77 | 0 | 1 | 181 | 1 | 181 | 6.24e-75 | 226 |
MS.gene031648.t1 | AT5G59150 | 60.241 | 166 | 59 | 3 | 55 | 216 | 3 | 165 | 2.00e-64 | 197 |
MS.gene031648.t1 | AT4G17170 | 45.933 | 209 | 111 | 1 | 10 | 216 | 3 | 211 | 2.65e-63 | 196 |
MS.gene031648.t1 | AT4G35860 | 44.019 | 209 | 115 | 1 | 10 | 216 | 3 | 211 | 9.76e-62 | 192 |
MS.gene031648.t1 | AT4G17160 | 43.689 | 206 | 112 | 1 | 10 | 215 | 3 | 204 | 7.14e-61 | 189 |
MS.gene031648.t1 | AT1G02130 | 45.498 | 211 | 104 | 2 | 7 | 216 | 2 | 202 | 3.40e-58 | 182 |
MS.gene031648.t1 | AT4G17530 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 3.03e-57 | 180 |
MS.gene031648.t1 | AT5G47200 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 4.74e-57 | 179 |
MS.gene031648.t1 | AT5G03520 | 45.833 | 216 | 105 | 4 | 5 | 216 | 7 | 214 | 1.55e-55 | 176 |
MS.gene031648.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene031648.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene031648.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene031648.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene031648.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene031648.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene031648.t1 | AT5G59840 | 43.925 | 214 | 107 | 4 | 9 | 217 | 11 | 216 | 8.90e-54 | 172 |
MS.gene031648.t1 | AT3G11730 | 46.286 | 175 | 94 | 0 | 8 | 182 | 3 | 177 | 8.76e-53 | 169 |
MS.gene031648.t1 | AT3G09900 | 43.981 | 216 | 111 | 3 | 5 | 216 | 7 | 216 | 1.81e-52 | 168 |
MS.gene031648.t1 | AT5G45130 | 41.089 | 202 | 106 | 3 | 15 | 216 | 12 | 200 | 2.09e-51 | 165 |
MS.gene031648.t1 | AT5G45130 | 41.000 | 200 | 105 | 3 | 17 | 216 | 22 | 208 | 3.06e-50 | 162 |
MS.gene031648.t1 | AT4G19640 | 45.399 | 163 | 89 | 0 | 15 | 177 | 12 | 174 | 9.77e-50 | 161 |
MS.gene031648.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene031648.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene031648.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene031648.t1 | AT3G54840 | 46.626 | 163 | 86 | 1 | 15 | 176 | 35 | 197 | 8.04e-48 | 156 |
MS.gene031648.t1 | AT3G54840 | 46.296 | 162 | 86 | 1 | 16 | 176 | 2 | 163 | 2.25e-47 | 154 |
MS.gene031648.t1 | AT3G54840 | 48.052 | 154 | 79 | 1 | 15 | 167 | 35 | 188 | 2.80e-46 | 152 |
MS.gene031648.t1 | AT5G03530 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 4.66e-46 | 152 |
MS.gene031648.t1 | AT5G03530 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 4.66e-46 | 152 |
MS.gene031648.t1 | AT4G35860 | 40.244 | 164 | 96 | 1 | 55 | 216 | 2 | 165 | 6.12e-43 | 142 |
MS.gene031648.t1 | AT1G22740 | 42.593 | 162 | 86 | 3 | 13 | 167 | 8 | 169 | 3.83e-40 | 136 |
MS.gene031648.t1 | AT2G44610 | 33.679 | 193 | 110 | 1 | 14 | 206 | 10 | 184 | 4.76e-40 | 136 |
MS.gene031648.t1 | AT5G03520 | 42.197 | 173 | 88 | 4 | 48 | 216 | 40 | 204 | 3.28e-39 | 134 |
MS.gene031648.t1 | AT1G52280 | 42.262 | 168 | 89 | 4 | 13 | 173 | 8 | 174 | 4.53e-39 | 134 |
MS.gene031648.t1 | AT4G19640 | 45.802 | 131 | 71 | 0 | 15 | 145 | 12 | 142 | 5.88e-39 | 133 |
MS.gene031648.t1 | AT2G22290 | 35.669 | 157 | 101 | 0 | 14 | 170 | 10 | 166 | 7.16e-39 | 133 |
MS.gene031648.t1 | AT4G39890 | 37.342 | 158 | 98 | 1 | 14 | 170 | 10 | 167 | 8.22e-39 | 133 |
MS.gene031648.t1 | AT3G09910 | 42.857 | 196 | 101 | 5 | 1 | 194 | 1 | 187 | 1.66e-38 | 132 |
MS.gene031648.t1 | AT3G09910 | 42.857 | 196 | 101 | 5 | 1 | 194 | 1 | 187 | 1.66e-38 | 132 |
MS.gene031648.t1 | AT4G19640 | 46.400 | 125 | 67 | 0 | 15 | 139 | 12 | 136 | 2.04e-38 | 130 |
MS.gene031648.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene031648.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene031648.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene031648.t1 | AT5G10260 | 32.124 | 193 | 113 | 1 | 14 | 206 | 10 | 184 | 1.55e-37 | 130 |
MS.gene031648.t1 | AT3G18820 | 36.190 | 210 | 113 | 7 | 13 | 214 | 8 | 204 | 1.73e-37 | 130 |
MS.gene031648.t1 | AT3G16100 | 40.741 | 162 | 89 | 3 | 13 | 167 | 8 | 169 | 1.40e-36 | 127 |
MS.gene031648.t1 | AT2G21880 | 40.000 | 165 | 92 | 3 | 13 | 170 | 9 | 173 | 2.29e-36 | 127 |
MS.gene031648.t1 | AT5G64990 | 34.783 | 161 | 105 | 0 | 14 | 174 | 8 | 168 | 2.64e-36 | 127 |
MS.gene031648.t1 | AT4G09720 | 38.788 | 165 | 94 | 2 | 13 | 170 | 8 | 172 | 4.47e-36 | 126 |
MS.gene031648.t1 | AT5G46025 | 57.547 | 106 | 44 | 1 | 75 | 179 | 6 | 111 | 5.78e-36 | 123 |
MS.gene031648.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 1.83e-35 | 124 |
MS.gene031648.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 1.83e-35 | 124 |
MS.gene031648.t1 | AT4G09720 | 37.059 | 170 | 95 | 2 | 13 | 170 | 8 | 177 | 1.28e-34 | 122 |
MS.gene031648.t1 | AT5G64990 | 33.333 | 168 | 105 | 1 | 14 | 174 | 8 | 175 | 1.53e-33 | 120 |
MS.gene031648.t1 | AT4G09720 | 35.795 | 176 | 95 | 2 | 13 | 170 | 8 | 183 | 1.73e-33 | 120 |
MS.gene031648.t1 | AT5G39620 | 37.195 | 164 | 96 | 3 | 14 | 170 | 6 | 169 | 9.19e-32 | 115 |
MS.gene031648.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 3.25e-27 | 102 |
MS.gene031648.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 3.25e-27 | 102 |
MS.gene031648.t1 | AT2G21880 | 35.152 | 165 | 92 | 4 | 13 | 170 | 9 | 165 | 1.79e-26 | 101 |
MS.gene031648.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene031648.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene031648.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene031648.t1 | AT5G55190 | 29.744 | 195 | 131 | 4 | 14 | 208 | 14 | 202 | 1.71e-24 | 96.7 |
MS.gene031648.t1 | AT5G20020 | 29.474 | 190 | 128 | 4 | 14 | 203 | 14 | 197 | 1.75e-24 | 96.7 |
MS.gene031648.t1 | AT5G20010 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.81e-24 | 96.7 |
MS.gene031648.t1 | AT5G55080 | 31.818 | 154 | 102 | 3 | 14 | 167 | 14 | 164 | 4.67e-24 | 95.5 |
MS.gene031648.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene031648.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene031648.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene031648.t1 | AT2G44690 | 31.667 | 180 | 109 | 5 | 13 | 180 | 18 | 195 | 1.80e-20 | 85.9 |
MS.gene031648.t1 | AT4G28950 | 38.333 | 120 | 71 | 3 | 13 | 131 | 6 | 123 | 1.47e-19 | 83.6 |
MS.gene031648.t1 | AT1G75840 | 34.000 | 150 | 89 | 4 | 13 | 161 | 6 | 146 | 1.63e-19 | 83.2 |
MS.gene031648.t1 | AT1G20090 | 33.333 | 150 | 90 | 4 | 13 | 161 | 5 | 145 | 3.09e-19 | 82.4 |
MS.gene031648.t1 | AT5G45970 | 38.333 | 120 | 71 | 3 | 13 | 131 | 6 | 123 | 7.96e-19 | 81.3 |
MS.gene031648.t1 | AT4G08190 | 53.521 | 71 | 30 | 1 | 97 | 167 | 60 | 127 | 9.69e-19 | 79.3 |
MS.gene031648.t1 | AT2G17800 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 1.43e-18 | 80.5 |
MS.gene031648.t1 | AT2G17800 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 1.43e-18 | 80.5 |
MS.gene031648.t1 | AT3G51300 | 33.784 | 148 | 88 | 4 | 15 | 161 | 8 | 146 | 1.45e-18 | 80.5 |
MS.gene031648.t1 | AT4G35950 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 3.62e-18 | 79.3 |
MS.gene031648.t1 | AT3G48040 | 31.138 | 167 | 101 | 5 | 13 | 167 | 8 | 172 | 7.95e-18 | 79.0 |
MS.gene031648.t1 | AT3G48040 | 34.615 | 130 | 82 | 3 | 13 | 141 | 8 | 135 | 2.38e-17 | 77.0 |
MS.gene031648.t1 | AT5G62880 | 28.977 | 176 | 111 | 5 | 13 | 176 | 8 | 181 | 3.40e-17 | 77.4 |
MS.gene031648.t1 | AT4G35020 | 36.885 | 122 | 74 | 3 | 15 | 135 | 8 | 127 | 3.57e-17 | 75.5 |
MS.gene031648.t1 | AT4G35020 | 36.885 | 122 | 74 | 3 | 15 | 135 | 8 | 127 | 3.57e-17 | 75.5 |
MS.gene031648.t1 | AT5G62880 | 35.000 | 120 | 75 | 3 | 13 | 131 | 8 | 125 | 9.75e-17 | 75.5 |
MS.gene031648.t1 | AT3G21700 | 24.859 | 177 | 125 | 4 | 5 | 175 | 99 | 273 | 4.90e-11 | 61.2 |
Find 41 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATTGTAAAGGCGCAAATT+TGG | 0.263893 | 4.3:+29799209 | MS.gene031648:CDS |
CTCTTCAAGGTTGTTCTTAT+CGG | 0.265240 | 4.3:+29799067 | MS.gene031648:CDS |
AAATGTGGAGAGATGGTTAA+AGG | 0.339786 | 4.3:+29800850 | MS.gene031648:CDS |
GATTGTAAAGGCGCAAATTT+GGG | 0.346753 | 4.3:+29799210 | MS.gene031648:CDS |
ACATTGATTGTCTGCCCTTT+CGG | 0.347019 | 4.3:-29801121 | None:intergenic |
AAGTGCTTACTCAAATATAT+CGG | 0.355067 | 4.3:+29801050 | MS.gene031648:CDS |
TGATGTCTCAGCTGTTAAAA+AGG | 0.356391 | 4.3:+29801156 | MS.gene031648:CDS |
TGCCCTTTCGGCAAAGCAGC+AGG | 0.357959 | 4.3:-29801109 | None:intergenic |
AACATTGTAATTATGCTTGT+AGG | 0.389104 | 4.3:+29800896 | MS.gene031648:CDS |
TGACTACGATTATCTCTTCA+AGG | 0.407767 | 4.3:+29799054 | MS.gene031648:CDS |
TGTGAAACGTGATAAGAGAT+TGG | 0.428162 | 4.3:-29799110 | None:intergenic |
AGTAGGAAGACTCTTGAGAT+TGG | 0.447739 | 4.3:+29801079 | MS.gene031648:CDS |
ACCCTGCTGCTTTGCCGAAA+GGG | 0.452369 | 4.3:+29801107 | MS.gene031648:CDS |
AAATATATCGGGTCGTTAGT+AGG | 0.469802 | 4.3:+29801062 | MS.gene031648:CDS |
GACCCTGCTGCTTTGCCGAA+AGG | 0.495154 | 4.3:+29801106 | MS.gene031648:CDS |
ACATTGTAATTATGCTTGTA+GGG | 0.495874 | 4.3:+29800897 | MS.gene031648:CDS |
GGGATACCGCTGGCCAAGAA+AGG | 0.500181 | 4.3:+29799230 | MS.gene031648:CDS |
TGTCAACATTCAATGATTCA+AGG | 0.510469 | 4.3:-29801015 | None:intergenic |
GTCAACATTCAATGATTCAA+GGG | 0.527360 | 4.3:-29801014 | None:intergenic |
TACAAGCATAATTACAATGT+TGG | 0.532166 | 4.3:-29800894 | None:intergenic |
AGTGCTTACTCAAATATATC+GGG | 0.535722 | 4.3:+29801051 | MS.gene031648:CDS |
TTGGAATCTAAATCCACCAT+TGG | 0.540764 | 4.3:+29799148 | MS.gene031648:CDS |
GTTGTTCTTATCGGTGACTC+CGG | 0.557067 | 4.3:+29799076 | MS.gene031648:CDS |
GCATATTACCGAGGAGCTGT+TGG | 0.560112 | 4.3:+29800785 | MS.gene031648:CDS |
CTTATCGGTGACTCCGGCGT+CGG | 0.565545 | 4.3:+29799082 | MS.gene031648:CDS |
TGTTGATGATAAGATTGTAA+AGG | 0.565954 | 4.3:+29799198 | MS.gene031648:CDS |
GAGATAATCGTAGTCATCAT+CGG | 0.580615 | 4.3:-29799047 | None:intergenic |
AATTATGCTTGTAGGGAACA+AGG | 0.586038 | 4.3:+29800904 | MS.gene031648:CDS |
GCGCAAATTTGGGATACCGC+TGG | 0.594608 | 4.3:+29799220 | MS.gene031648:CDS |
AAAGGGCAGACAATCAATGT+TGG | 0.598448 | 4.3:+29801124 | MS.gene031648:CDS |
AGCGAATTCAACACCAATGG+TGG | 0.599801 | 4.3:-29799161 | None:intergenic |
GAGATTGGATTTACCGACGC+CGG | 0.606160 | 4.3:-29799095 | None:intergenic |
GCCCTTTCGGCAAAGCAGCA+GGG | 0.609170 | 4.3:-29801108 | None:intergenic |
TTTAGCATCATCTGTGGACA+CGG | 0.622264 | 4.3:-29800948 | None:intergenic |
ATGTAACCTTTCTTGGCCAG+CGG | 0.634062 | 4.3:-29799236 | None:intergenic |
GCAATGCACCAACAGCTCCT+CGG | 0.640378 | 4.3:-29800793 | None:intergenic |
TTGGTGTTGAATTCGCTACA+CGG | 0.653013 | 4.3:+29799167 | MS.gene031648:CDS |
TGTAGCGAATTCAACACCAA+TGG | 0.659620 | 4.3:-29799164 | None:intergenic |
AAATGCTTTAGCATCATCTG+TGG | 0.691636 | 4.3:-29800954 | None:intergenic |
ATCACAAGTGCATATTACCG+AGG | 0.696878 | 4.3:+29800776 | MS.gene031648:CDS |
TTACAATGTTGGCATCTGTG+TGG | 0.772558 | 4.3:-29800883 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTATGCTATATATTTA+TGG | + | chr4.3:29799586-29799605 | MS.gene031648:intron | 10.0% |
!!! | TTTTCTTTTTGTTATAAAAT+AGG | - | chr4.3:29799965-29799984 | None:intergenic | 10.0% |
!!! | AATTTTGATGATACTTTTAA+TGG | + | chr4.3:29800588-29800607 | MS.gene031648:intron | 15.0% |
!! | ATTAGAAAAAATGCAAACAT+AGG | + | chr4.3:29799528-29799547 | MS.gene031648:intron | 20.0% |
!! | TCCAATATAAAAACCTAAAA+TGG | - | chr4.3:29799862-29799881 | None:intergenic | 20.0% |
!! | TGAAAAATTGAGATTTGATT+TGG | + | chr4.3:29799383-29799402 | MS.gene031648:intron | 20.0% |
!!! | ACCATTTTAGGTTTTTATAT+TGG | + | chr4.3:29799858-29799877 | MS.gene031648:intron | 20.0% |
!!! | ATTATTTTTTGGGATTTTTG+TGG | + | chr4.3:29799308-29799327 | MS.gene031648:intron | 20.0% |
! | AAAATAGGTATCCTTTGTAT+TGG | - | chr4.3:29799950-29799969 | None:intergenic | 25.0% |
! | AAAGAAAAGGAAAGGTTAAT+TGG | - | chr4.3:29800235-29800254 | None:intergenic | 25.0% |
! | AAATAGGTATCCTTTGTATT+GGG | - | chr4.3:29799949-29799968 | None:intergenic | 25.0% |
! | AACATTGTAATTATGCTTGT+AGG | + | chr4.3:29800896-29800915 | MS.gene031648:CDS | 25.0% |
! | AAGTGCTTACTCAAATATAT+CGG | + | chr4.3:29801050-29801069 | MS.gene031648:CDS | 25.0% |
! | ACATTGTAATTATGCTTGTA+GGG | + | chr4.3:29800897-29800916 | MS.gene031648:CDS | 25.0% |
! | ATATTGCTTAGAGAAAGAAA+AGG | - | chr4.3:29800248-29800267 | None:intergenic | 25.0% |
! | ATGTTTATTGAGAAATCATG+TGG | - | chr4.3:29800323-29800342 | None:intergenic | 25.0% |
! | ATTATTTCACAATTCACACA+AGG | - | chr4.3:29800154-29800173 | None:intergenic | 25.0% |
! | GATAAAAATGTAACCTTTCT+TGG | - | chr4.3:29799246-29799265 | None:intergenic | 25.0% |
! | TACAAGCATAATTACAATGT+TGG | - | chr4.3:29800897-29800916 | None:intergenic | 25.0% |
! | TCATAAAAGTGACATCAATT+TGG | + | chr4.3:29800406-29800425 | MS.gene031648:intron | 25.0% |
! | TTGATCTCAAAATTCATTGA+AGG | + | chr4.3:29800624-29800643 | MS.gene031648:intron | 25.0% |
!! | ATTTGATGACTTCTGTAAAA+TGG | + | chr4.3:29799991-29800010 | MS.gene031648:intron | 25.0% |
!! | CACAAAGTATTTGGTATATT+GGG | + | chr4.3:29799698-29799717 | MS.gene031648:intron | 25.0% |
!!! | AAGAGAGAACACATTTTTTA+TGG | + | chr4.3:29800982-29801001 | MS.gene031648:CDS | 25.0% |
!!! | ACATGTAACTTTTGAAAATG+TGG | + | chr4.3:29800835-29800854 | MS.gene031648:CDS | 25.0% |
!!! | AGATATCACTTTTATGACTT+AGG | - | chr4.3:29800434-29800453 | None:intergenic | 25.0% |
!!! | ATAGGCTTTAATACCATTTT+AGG | + | chr4.3:29799846-29799865 | MS.gene031648:intron | 25.0% |
!!! | GGGTTTGGTTAAATTTTAAT+GGG | + | chr4.3:29799345-29799364 | MS.gene031648:intron | 25.0% |
!!! | TGTTGATGATAAGATTGTAA+AGG | + | chr4.3:29799198-29799217 | MS.gene031648:CDS | 25.0% |
!!! | TTTGATCGCATTTCTTTTTT+TGG | + | chr4.3:29799271-29799290 | MS.gene031648:intron | 25.0% |
AAGTCATAAAAGTGACATCA+TGG | + | chr4.3:29800465-29800484 | MS.gene031648:intron | 30.0% | |
AGTGCTTACTCAAATATATC+GGG | + | chr4.3:29801051-29801070 | MS.gene031648:CDS | 30.0% | |
ATGTGGAAGAAAAAAACATG+AGG | - | chr4.3:29800187-29800206 | None:intergenic | 30.0% | |
CAAAGTGATATTGTATCATC+GGG | - | chr4.3:29800385-29800404 | None:intergenic | 30.0% | |
CACAAAAAACGAATTCAGTT+TGG | + | chr4.3:29799129-29799148 | MS.gene031648:CDS | 30.0% | |
CATCCTTACAAACTCTAATT+TGG | + | chr4.3:29799889-29799908 | MS.gene031648:intron | 30.0% | |
CCAAAGTGATATTGTATCAT+CGG | - | chr4.3:29800386-29800405 | None:intergenic | 30.0% | |
GTCAACATTCAATGATTCAA+GGG | - | chr4.3:29801017-29801036 | None:intergenic | 30.0% | |
TGTCAACATTCAATGATTCA+AGG | - | chr4.3:29801018-29801037 | None:intergenic | 30.0% | |
TGTGGAAGAAAAAAACATGA+GGG | - | chr4.3:29800186-29800205 | None:intergenic | 30.0% | |
! | AACGATAGGCTTTGATAATT+GGG | + | chr4.3:29799770-29799789 | MS.gene031648:intron | 30.0% |
! | GATGATACTTTTAATGGTTG+AGG | + | chr4.3:29800594-29800613 | MS.gene031648:intron | 30.0% |
! | GCACAAAGTATTTGGTATAT+TGG | + | chr4.3:29799697-29799716 | MS.gene031648:intron | 30.0% |
! | TATGCCATTCACATTTTTCT+GGG | + | chr4.3:29799553-29799572 | MS.gene031648:intron | 30.0% |
! | TTATGCCATTCACATTTTTC+TGG | + | chr4.3:29799552-29799571 | MS.gene031648:intron | 30.0% |
!! | GGGGTTTGGTTAAATTTTAA+TGG | + | chr4.3:29799344-29799363 | MS.gene031648:intron | 30.0% |
!! | TATCTGGATGATTTTGACAT+TGG | + | chr4.3:29799478-29799497 | MS.gene031648:intron | 30.0% |
!!! | ATGATGTCACTTTTATGACT+TGG | - | chr4.3:29800466-29800485 | None:intergenic | 30.0% |
!!! | TGATGTCACTTTTATGACTT+GGG | - | chr4.3:29800465-29800484 | None:intergenic | 30.0% |
AAATATATCGGGTCGTTAGT+AGG | + | chr4.3:29801062-29801081 | MS.gene031648:CDS | 35.0% | |
AAATGCTTTAGCATCATCTG+TGG | - | chr4.3:29800957-29800976 | None:intergenic | 35.0% | |
AAATGTGGAGAGATGGTTAA+AGG | + | chr4.3:29800850-29800869 | MS.gene031648:CDS | 35.0% | |
AATTATGCTTGTAGGGAACA+AGG | + | chr4.3:29800904-29800923 | MS.gene031648:CDS | 35.0% | |
ACAACTCATTCGTACAAAAC+CGG | + | chr4.3:29799794-29799813 | MS.gene031648:intron | 35.0% | |
AGAGTTTGTAAGGATGAGTT+AGG | - | chr4.3:29799885-29799904 | None:intergenic | 35.0% | |
AGGCCAAATTAGAGTTTGTA+AGG | - | chr4.3:29799895-29799914 | None:intergenic | 35.0% | |
AGGCTCAAAAGTTAAAACCA+TGG | - | chr4.3:29800042-29800061 | None:intergenic | 35.0% | |
CAATTCTGTAGTGTAGATGA+AGG | + | chr4.3:29800114-29800133 | MS.gene031648:intron | 35.0% | |
CCGATGATACAATATCACTT+TGG | + | chr4.3:29800383-29800402 | MS.gene031648:intron | 35.0% | |
CTCTTCAAGGTTGTTCTTAT+CGG | + | chr4.3:29799067-29799086 | MS.gene031648:CDS | 35.0% | |
GACTTCTGTAAAATGGTGAA+TGG | + | chr4.3:29799998-29800017 | MS.gene031648:intron | 35.0% | |
GAGATAATCGTAGTCATCAT+CGG | - | chr4.3:29799050-29799069 | None:intergenic | 35.0% | |
GCTTAGAGAAAGAAAAGGAA+AGG | - | chr4.3:29800243-29800262 | None:intergenic | 35.0% | |
GTAGTGTAGATGAAGGTTTA+GGG | + | chr4.3:29800121-29800140 | MS.gene031648:intron | 35.0% | |
GTTGCAAAAACAAACGAATG+TGG | - | chr4.3:29800204-29800223 | None:intergenic | 35.0% | |
TAGTCCATCAATCTGTACAA+AGG | + | chr4.3:29800563-29800582 | MS.gene031648:intron | 35.0% | |
TGACTACGATTATCTCTTCA+AGG | + | chr4.3:29799054-29799073 | MS.gene031648:CDS | 35.0% | |
TGATGTCTCAGCTGTTAAAA+AGG | + | chr4.3:29801156-29801175 | MS.gene031648:CDS | 35.0% | |
TGTAGTGTAGATGAAGGTTT+AGG | + | chr4.3:29800120-29800139 | MS.gene031648:intron | 35.0% | |
TGTCAACTTTGCATGATTGA+AGG | - | chr4.3:29800537-29800556 | None:intergenic | 35.0% | |
TGTGAAACGTGATAAGAGAT+TGG | - | chr4.3:29799113-29799132 | None:intergenic | 35.0% | |
TTGGAATCTAAATCCACCAT+TGG | + | chr4.3:29799148-29799167 | MS.gene031648:CDS | 35.0% | |
TTGGGTTTATCCCAATACAA+AGG | + | chr4.3:29799936-29799955 | MS.gene031648:intron | 35.0% | |
TTGTCCCAGAAAAATGTGAA+TGG | - | chr4.3:29799560-29799579 | None:intergenic | 35.0% | |
TTGTCCTTTGTACAGATTGA+TGG | - | chr4.3:29800570-29800589 | None:intergenic | 35.0% | |
! | AGATTGTAAAGGCGCAAATT+TGG | + | chr4.3:29799209-29799228 | MS.gene031648:CDS | 35.0% |
! | GAAATGTCTGTTGTTGTTGT+GGG | + | chr4.3:29799444-29799463 | MS.gene031648:intron | 35.0% |
! | GAACGATAGGCTTTGATAAT+TGG | + | chr4.3:29799769-29799788 | MS.gene031648:intron | 35.0% |
! | GATTGTAAAGGCGCAAATTT+GGG | + | chr4.3:29799210-29799229 | MS.gene031648:CDS | 35.0% |
! | GCCTTATCTTTTATCAATGC+GGG | + | chr4.3:29799911-29799930 | MS.gene031648:intron | 35.0% |
! | TCCCGCATTGATAAAAGATA+AGG | - | chr4.3:29799915-29799934 | None:intergenic | 35.0% |
! | TGAAATGTCTGTTGTTGTTG+TGG | + | chr4.3:29799443-29799462 | MS.gene031648:intron | 35.0% |
! | TTGAAAGCTTTATGTTGCCA+TGG | + | chr4.3:29800022-29800041 | MS.gene031648:intron | 35.0% |
! | TTTTGTGGAGCGAATTTTAG+TGG | + | chr4.3:29799323-29799342 | MS.gene031648:intron | 35.0% |
!! | CTTTTGAAAATGTGGAGAGA+TGG | + | chr4.3:29800843-29800862 | MS.gene031648:CDS | 35.0% |
!! | GGCCTTATCTTTTATCAATG+CGG | + | chr4.3:29799910-29799929 | MS.gene031648:intron | 35.0% |
!! | TTGGTGATGATGAATGATGT+AGG | + | chr4.3:29799402-29799421 | MS.gene031648:intron | 35.0% |
!! | TTTGTGGAGCGAATTTTAGT+GGG | + | chr4.3:29799324-29799343 | MS.gene031648:intron | 35.0% |
!!! | GTGGGATTCTTGTTTTTATC+TGG | + | chr4.3:29799462-29799481 | MS.gene031648:intron | 35.0% |
!!! | TGGTTTTAACTTTTGAGCCT+TGG | + | chr4.3:29800042-29800061 | MS.gene031648:intron | 35.0% |
AAAACCGGATTGTAAGGTGA+GGG | + | chr4.3:29799737-29799756 | MS.gene031648:intron | 40.0% | |
AAAGGGCAGACAATCAATGT+TGG | + | chr4.3:29801124-29801143 | MS.gene031648:CDS | 40.0% | |
ACAACTCGTTCGTACAAAAC+CGG | + | chr4.3:29799722-29799741 | MS.gene031648:intron | 40.0% | |
ACATCATGGTCCTCCAAAAA+AGG | + | chr4.3:29800479-29800498 | MS.gene031648:intron | 40.0% | |
AGTAGGAAGACTCTTGAGAT+TGG | + | chr4.3:29801079-29801098 | MS.gene031648:CDS | 40.0% | |
ATCACAAGTGCATATTACCG+AGG | + | chr4.3:29800776-29800795 | MS.gene031648:CDS | 40.0% | |
GTATCATCGGGTACGTAAAT+GGG | - | chr4.3:29800373-29800392 | None:intergenic | 40.0% | |
GTCTCAGCTGTTAAAAAGGT+TGG | + | chr4.3:29801160-29801179 | MS.gene031648:CDS | 40.0% | |
TCGTACAAAACCGGATTGTA+AGG | + | chr4.3:29799731-29799750 | MS.gene031648:intron | 40.0% | |
TGTAGCGAATTCAACACCAA+TGG | - | chr4.3:29799167-29799186 | None:intergenic | 40.0% | |
TGTATCATCGGGTACGTAAA+TGG | - | chr4.3:29800374-29800393 | None:intergenic | 40.0% | |
TTACAATGTTGGCATCTGTG+TGG | - | chr4.3:29800886-29800905 | None:intergenic | 40.0% | |
TTTAGCATCATCTGTGGACA+CGG | - | chr4.3:29800951-29800970 | None:intergenic | 40.0% | |
! | AACTTTTGAGCCTTGGTAGA+TGG | + | chr4.3:29800049-29800068 | MS.gene031648:intron | 40.0% |
! | ACATTGATTGTCTGCCCTTT+CGG | - | chr4.3:29801124-29801143 | None:intergenic | 40.0% |
! | CTTTTATCAATGCGGGACTT+GGG | + | chr4.3:29799918-29799937 | MS.gene031648:intron | 40.0% |
! | TCTTTTATCAATGCGGGACT+TGG | + | chr4.3:29799917-29799936 | MS.gene031648:intron | 40.0% |
!! | TTGGTGTTGAATTCGCTACA+CGG | + | chr4.3:29799167-29799186 | MS.gene031648:CDS | 40.0% |
!! | TTGTGGAGCGAATTTTAGTG+GGG | + | chr4.3:29799325-29799344 | MS.gene031648:intron | 40.0% |
!!! | CTACCTAATGCCACCTTTTT+TGG | - | chr4.3:29800495-29800514 | None:intergenic | 40.0% |
AAACCGGATTGTAAGGTGAG+GGG | + | chr4.3:29799738-29799757 | MS.gene031648:intron | 45.0% | |
AGCGAATTCAACACCAATGG+TGG | - | chr4.3:29799164-29799183 | None:intergenic | 45.0% | |
ATGTAACCTTTCTTGGCCAG+CGG | - | chr4.3:29799239-29799258 | None:intergenic | 45.0% | |
CAAAACCGGATTGTAAGGTG+AGG | + | chr4.3:29799736-29799755 | MS.gene031648:intron | 45.0% | |
CACAATTACCTGAGTGCACT+TGG | + | chr4.3:29799638-29799657 | MS.gene031648:intron | 45.0% | |
CCAAATACTTTGTGCGCAAC+TGG | - | chr4.3:29799692-29799711 | None:intergenic | 45.0% | |
CCTCCAAAAAAGGTGGCATT+AGG | + | chr4.3:29800489-29800508 | MS.gene031648:intron | 45.0% | |
GCACTTGGATGAGATGGTTT+AGG | + | chr4.3:29799653-29799672 | MS.gene031648:intron | 45.0% | |
GTTGTTCTTATCGGTGACTC+CGG | + | chr4.3:29799076-29799095 | MS.gene031648:CDS | 45.0% | |
TCATGGTCCTCCAAAAAAGG+TGG | + | chr4.3:29800482-29800501 | MS.gene031648:intron | 45.0% | |
! | CCAGTTGCGCACAAAGTATT+TGG | + | chr4.3:29799689-29799708 | MS.gene031648:intron | 45.0% |
! | CCATCTACCCAGACGATTTT+GGG | - | chr4.3:29800277-29800296 | None:intergenic | 45.0% |
!! | AGCCTTGGTAGATGGTTTTG+TGG | + | chr4.3:29800057-29800076 | MS.gene031648:intron | 45.0% |
!! | GAGCGAATTTTAGTGGGGTT+TGG | + | chr4.3:29799330-29799349 | MS.gene031648:intron | 45.0% |
!!! | CCTAATGCCACCTTTTTTGG+AGG | - | chr4.3:29800492-29800511 | None:intergenic | 45.0% |
!!! | CCTTGGTAGATGGTTTTGTG+GGG | + | chr4.3:29800059-29800078 | MS.gene031648:intron | 45.0% |
!!! | GCCTTGGTAGATGGTTTTGT+GGG | + | chr4.3:29800058-29800077 | MS.gene031648:intron | 45.0% |
!!! | TGATTTTTTTATTATTTTTT+GGG | + | chr4.3:29799298-29799317 | MS.gene031648:intron | 5.0% |
!!! | TTGATTTTTTTATTATTTTT+TGG | + | chr4.3:29799297-29799316 | MS.gene031648:intron | 5.0% |
AACCGGATTGTAAGGTGAGG+GGG | + | chr4.3:29799739-29799758 | MS.gene031648:intron | 50.0% | |
ATGCTGCTCCCAAAATCGTC+TGG | + | chr4.3:29800266-29800285 | MS.gene031648:intron | 50.0% | |
CATCTCATCCAAGTGCACTC+AGG | - | chr4.3:29799649-29799668 | None:intergenic | 50.0% | |
CCCAAAATCGTCTGGGTAGA+TGG | + | chr4.3:29800274-29800293 | MS.gene031648:intron | 50.0% | |
CCCCACAAAACCATCTACCA+AGG | - | chr4.3:29800062-29800081 | None:intergenic | 50.0% | |
CTGAGTGCACTTGGATGAGA+TGG | + | chr4.3:29799647-29799666 | MS.gene031648:intron | 50.0% | |
GAGATTGGATTTACCGACGC+CGG | - | chr4.3:29799098-29799117 | None:intergenic | 50.0% | |
GCATATTACCGAGGAGCTGT+TGG | + | chr4.3:29800785-29800804 | MS.gene031648:CDS | 50.0% | |
TGCTGCTCCCAAAATCGTCT+GGG | + | chr4.3:29800267-29800286 | MS.gene031648:intron | 50.0% | |
! | GCCATCTACCCAGACGATTT+TGG | - | chr4.3:29800278-29800297 | None:intergenic | 50.0% |
!!! | GTAGATGGTTTTGTGGGGAG+TGG | + | chr4.3:29800064-29800083 | MS.gene031648:intron | 50.0% |
CACCCCCTCACCTTACAATC+CGG | - | chr4.3:29799744-29799763 | None:intergenic | 55.0% | |
GCAATGCACCAACAGCTCCT+CGG | - | chr4.3:29800796-29800815 | None:intergenic | 55.0% | |
TGTAAGGTGAGGGGGTGACT+CGG | + | chr4.3:29799747-29799766 | MS.gene031648:intron | 55.0% | |
! | GCGCAAATTTGGGATACCGC+TGG | + | chr4.3:29799220-29799239 | MS.gene031648:CDS | 55.0% |
!! | ACCCTGCTGCTTTGCCGAAA+GGG | + | chr4.3:29801107-29801126 | MS.gene031648:CDS | 55.0% |
CTTATCGGTGACTCCGGCGT+CGG | + | chr4.3:29799082-29799101 | MS.gene031648:CDS | 60.0% | |
GCCCTTTCGGCAAAGCAGCA+GGG | - | chr4.3:29801111-29801130 | None:intergenic | 60.0% | |
GGGATACCGCTGGCCAAGAA+AGG | + | chr4.3:29799230-29799249 | MS.gene031648:CDS | 60.0% | |
TGCCCTTTCGGCAAAGCAGC+AGG | - | chr4.3:29801112-29801131 | None:intergenic | 60.0% | |
! | AGGGGGTGACTCGGAACGAT+AGG | + | chr4.3:29799756-29799775 | MS.gene031648:intron | 60.0% |
!! | GACCCTGCTGCTTTGCCGAA+AGG | + | chr4.3:29801106-29801125 | MS.gene031648:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 29799031 | 29801198 | 29799031 | ID=MS.gene031648 |
chr4.3 | mRNA | 29799031 | 29801198 | 29799031 | ID=MS.gene031648.t1;Parent=MS.gene031648 |
chr4.3 | exon | 29799031 | 29799251 | 29799031 | ID=MS.gene031648.t1.exon1;Parent=MS.gene031648.t1 |
chr4.3 | CDS | 29799031 | 29799251 | 29799031 | ID=cds.MS.gene031648.t1;Parent=MS.gene031648.t1 |
chr4.3 | exon | 29800766 | 29801198 | 29800766 | ID=MS.gene031648.t1.exon2;Parent=MS.gene031648.t1 |
chr4.3 | CDS | 29800766 | 29801198 | 29800766 | ID=cds.MS.gene031648.t1;Parent=MS.gene031648.t1 |
Gene Sequence |
Protein sequence |