Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025879.t1 | RHN49575.1 | 95.6 | 228 | 10 | 0 | 1 | 228 | 1 | 228 | 2.20E-116 | 428.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025879.t1 | Q9LNK1 | 69.0 | 239 | 61 | 4 | 1 | 228 | 1 | 237 | 1.2e-83 | 310.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025879.t1 | A0A396HE47 | 95.6 | 228 | 10 | 0 | 1 | 228 | 1 | 228 | 1.6e-116 | 428.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025879.t1 | MTR_7g117910 | 83.333 | 228 | 22 | 2 | 1 | 228 | 1 | 212 | 3.05e-135 | 379 |
MS.gene025879.t1 | MTR_8g027220 | 82.791 | 215 | 35 | 1 | 14 | 228 | 20 | 232 | 1.35e-131 | 370 |
MS.gene025879.t1 | MTR_8g089985 | 65.877 | 211 | 69 | 2 | 15 | 223 | 12 | 221 | 3.83e-97 | 283 |
MS.gene025879.t1 | MTR_3g086980 | 66.184 | 207 | 67 | 2 | 15 | 219 | 11 | 216 | 2.40e-96 | 280 |
MS.gene025879.t1 | MTR_0262s0050 | 67.526 | 194 | 61 | 1 | 16 | 207 | 11 | 204 | 3.10e-91 | 268 |
MS.gene025879.t1 | MTR_1g052475 | 64.796 | 196 | 66 | 1 | 15 | 207 | 10 | 205 | 7.52e-91 | 266 |
MS.gene025879.t1 | MTR_2g005510 | 59.813 | 214 | 83 | 1 | 14 | 227 | 9 | 219 | 7.90e-89 | 261 |
MS.gene025879.t1 | MTR_2g075950 | 54.167 | 216 | 95 | 1 | 12 | 227 | 5 | 216 | 4.23e-83 | 247 |
MS.gene025879.t1 | MTR_2g014990 | 54.795 | 219 | 95 | 2 | 10 | 228 | 3 | 217 | 1.45e-82 | 245 |
MS.gene025879.t1 | MTR_4g064897 | 56.863 | 204 | 88 | 0 | 10 | 213 | 2 | 205 | 2.35e-82 | 244 |
MS.gene025879.t1 | MTR_4g088090 | 54.338 | 219 | 96 | 2 | 10 | 228 | 3 | 217 | 3.84e-82 | 244 |
MS.gene025879.t1 | MTR_4g079350 | 54.338 | 219 | 96 | 2 | 10 | 228 | 3 | 217 | 7.99e-82 | 243 |
MS.gene025879.t1 | MTR_3g069510 | 57.000 | 200 | 86 | 0 | 10 | 209 | 2 | 201 | 2.80e-81 | 242 |
MS.gene025879.t1 | MTR_2g090865 | 55.399 | 213 | 90 | 3 | 15 | 227 | 6 | 213 | 1.20e-78 | 235 |
MS.gene025879.t1 | MTR_2g083860 | 59.116 | 181 | 74 | 0 | 12 | 192 | 5 | 185 | 1.30e-78 | 235 |
MS.gene025879.t1 | MTR_8g036220 | 50.885 | 226 | 106 | 2 | 5 | 226 | 1 | 225 | 1.92e-77 | 233 |
MS.gene025879.t1 | MTR_1g078200 | 60.000 | 175 | 70 | 0 | 18 | 192 | 12 | 186 | 6.68e-75 | 226 |
MS.gene025879.t1 | MTR_7g405790 | 51.923 | 208 | 97 | 1 | 19 | 226 | 14 | 218 | 5.20e-73 | 221 |
MS.gene025879.t1 | MTR_7g051940 | 51.905 | 210 | 94 | 2 | 19 | 228 | 12 | 214 | 7.61e-71 | 216 |
MS.gene025879.t1 | MTR_6g079550 | 48.649 | 222 | 102 | 2 | 10 | 227 | 2 | 215 | 2.72e-70 | 214 |
MS.gene025879.t1 | MTR_8g107070 | 52.604 | 192 | 91 | 0 | 15 | 206 | 9 | 200 | 6.95e-65 | 202 |
MS.gene025879.t1 | MTR_8g031870 | 52.761 | 163 | 77 | 0 | 19 | 181 | 5 | 167 | 5.45e-59 | 184 |
MS.gene025879.t1 | MTR_8g031660 | 52.096 | 167 | 80 | 0 | 19 | 185 | 5 | 171 | 5.82e-58 | 182 |
MS.gene025879.t1 | MTR_2g027660 | 48.066 | 181 | 94 | 0 | 19 | 199 | 5 | 185 | 6.25e-58 | 182 |
MS.gene025879.t1 | MTR_8g031680 | 50.588 | 170 | 84 | 0 | 19 | 188 | 5 | 174 | 1.60e-56 | 179 |
MS.gene025879.t1 | MTR_6g021790 | 50.610 | 164 | 81 | 0 | 18 | 181 | 4 | 167 | 5.04e-56 | 177 |
MS.gene025879.t1 | MTR_2g005500 | 45.263 | 190 | 103 | 1 | 18 | 207 | 7 | 195 | 7.83e-55 | 174 |
MS.gene025879.t1 | MTR_8g031830 | 50.299 | 167 | 82 | 1 | 19 | 184 | 5 | 171 | 5.30e-54 | 172 |
MS.gene025879.t1 | MTR_7g081700 | 43.077 | 195 | 109 | 1 | 18 | 212 | 6 | 198 | 9.25e-53 | 169 |
MS.gene025879.t1 | MTR_8g006970 | 43.878 | 196 | 107 | 2 | 18 | 212 | 20 | 213 | 9.52e-53 | 169 |
MS.gene025879.t1 | MTR_1g068730 | 40.887 | 203 | 114 | 2 | 12 | 213 | 7 | 204 | 3.38e-51 | 166 |
MS.gene025879.t1 | MTR_8g006970 | 48.171 | 164 | 85 | 0 | 18 | 181 | 6 | 169 | 7.04e-51 | 164 |
MS.gene025879.t1 | MTR_1g068740 | 40.887 | 203 | 114 | 2 | 12 | 213 | 7 | 204 | 7.08e-51 | 165 |
MS.gene025879.t1 | MTR_7g100020 | 41.146 | 192 | 107 | 2 | 18 | 208 | 13 | 199 | 7.55e-49 | 159 |
MS.gene025879.t1 | MTR_1g115325 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 2.84e-48 | 158 |
MS.gene025879.t1 | MTR_3g064390 | 42.945 | 163 | 93 | 0 | 22 | 184 | 12 | 174 | 6.37e-47 | 154 |
MS.gene025879.t1 | MTR_8g093740 | 42.188 | 192 | 105 | 4 | 8 | 197 | 1 | 188 | 5.97e-46 | 152 |
MS.gene025879.t1 | MTR_5g076590 | 41.975 | 162 | 94 | 0 | 22 | 183 | 12 | 173 | 6.61e-46 | 151 |
MS.gene025879.t1 | MTR_1g094220 | 42.941 | 170 | 92 | 2 | 22 | 190 | 33 | 198 | 1.07e-45 | 151 |
MS.gene025879.t1 | MTR_2g102060 | 39.326 | 178 | 107 | 1 | 12 | 189 | 3 | 179 | 4.64e-45 | 149 |
MS.gene025879.t1 | MTR_2g096550 | 37.688 | 199 | 118 | 4 | 14 | 206 | 9 | 207 | 2.88e-44 | 147 |
MS.gene025879.t1 | MTR_8g103550 | 40.120 | 167 | 100 | 0 | 22 | 188 | 11 | 177 | 3.07e-44 | 147 |
MS.gene025879.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 3.39e-44 | 147 |
MS.gene025879.t1 | MTR_1g029450 | 41.026 | 195 | 112 | 3 | 16 | 208 | 13 | 206 | 3.47e-44 | 147 |
MS.gene025879.t1 | MTR_3g096350 | 41.969 | 193 | 105 | 5 | 8 | 198 | 1 | 188 | 4.53e-44 | 147 |
MS.gene025879.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 6.96e-44 | 146 |
MS.gene025879.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 1.17e-43 | 147 |
MS.gene025879.t1 | MTR_4g099470 | 43.558 | 163 | 88 | 2 | 51 | 212 | 15 | 174 | 1.38e-43 | 145 |
MS.gene025879.t1 | MTR_4g063160 | 42.012 | 169 | 95 | 2 | 18 | 183 | 13 | 181 | 3.30e-43 | 145 |
MS.gene025879.t1 | MTR_7g103070 | 45.062 | 162 | 87 | 2 | 18 | 177 | 14 | 175 | 3.47e-43 | 145 |
MS.gene025879.t1 | MTR_1g062760 | 44.444 | 171 | 92 | 3 | 18 | 186 | 12 | 181 | 2.04e-42 | 143 |
MS.gene025879.t1 | MTR_1g068730 | 44.444 | 135 | 75 | 0 | 9 | 143 | 4 | 138 | 7.71e-42 | 140 |
MS.gene025879.t1 | MTR_1g068740 | 44.604 | 139 | 76 | 1 | 9 | 146 | 4 | 142 | 1.19e-41 | 140 |
MS.gene025879.t1 | MTR_5g013900 | 40.127 | 157 | 94 | 0 | 21 | 177 | 10 | 166 | 1.65e-41 | 140 |
MS.gene025879.t1 | MTR_4g098950 | 38.854 | 157 | 96 | 0 | 21 | 177 | 10 | 166 | 1.21e-40 | 138 |
MS.gene025879.t1 | MTR_3g087160 | 38.217 | 157 | 97 | 0 | 21 | 177 | 10 | 166 | 1.90e-40 | 137 |
MS.gene025879.t1 | MTR_8g090215 | 38.217 | 157 | 97 | 0 | 21 | 177 | 10 | 166 | 6.67e-40 | 136 |
MS.gene025879.t1 | MTR_1g090717 | 44.253 | 174 | 94 | 3 | 18 | 188 | 13 | 186 | 3.69e-39 | 134 |
MS.gene025879.t1 | MTR_3g096350 | 44.366 | 142 | 73 | 5 | 8 | 145 | 1 | 140 | 1.23e-35 | 124 |
MS.gene025879.t1 | MTR_3g096350 | 47.368 | 133 | 66 | 4 | 8 | 138 | 1 | 131 | 1.70e-35 | 123 |
MS.gene025879.t1 | MTR_3g064390 | 42.969 | 128 | 73 | 0 | 22 | 149 | 12 | 139 | 1.35e-34 | 121 |
MS.gene025879.t1 | MTR_8g093740 | 43.243 | 148 | 79 | 3 | 51 | 196 | 10 | 154 | 1.76e-33 | 119 |
MS.gene025879.t1 | MTR_8g092020 | 38.650 | 163 | 93 | 3 | 20 | 175 | 12 | 174 | 7.26e-33 | 118 |
MS.gene025879.t1 | MTR_1g097420 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 5.32e-32 | 116 |
MS.gene025879.t1 | MTR_4g069850 | 38.889 | 162 | 92 | 3 | 20 | 174 | 8 | 169 | 2.75e-31 | 114 |
MS.gene025879.t1 | MTR_2g101890 | 37.654 | 162 | 94 | 3 | 20 | 174 | 10 | 171 | 2.28e-30 | 112 |
MS.gene025879.t1 | MTR_7g103070 | 45.763 | 118 | 62 | 2 | 62 | 177 | 2 | 119 | 3.39e-30 | 110 |
MS.gene025879.t1 | MTR_4g012940 | 37.654 | 162 | 94 | 3 | 20 | 174 | 8 | 169 | 5.66e-30 | 110 |
MS.gene025879.t1 | MTR_6g039490 | 36.196 | 163 | 97 | 3 | 20 | 175 | 8 | 170 | 1.10e-27 | 105 |
MS.gene025879.t1 | MTR_2g005500 | 33.158 | 190 | 86 | 2 | 18 | 207 | 7 | 155 | 2.46e-26 | 100 |
MS.gene025879.t1 | MTR_1g097420 | 35.152 | 165 | 98 | 4 | 18 | 175 | 35 | 197 | 3.15e-26 | 102 |
MS.gene025879.t1 | MTR_3g107717 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 3.65e-23 | 93.6 |
MS.gene025879.t1 | MTR_3g107713 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 3.77e-23 | 93.6 |
MS.gene025879.t1 | MTR_3g107707 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 4.10e-23 | 93.6 |
MS.gene025879.t1 | MTR_8g031810 | 43.269 | 104 | 45 | 1 | 19 | 122 | 5 | 94 | 6.28e-23 | 89.4 |
MS.gene025879.t1 | MTR_1g069245 | 47.368 | 95 | 46 | 2 | 33 | 127 | 109 | 199 | 4.93e-21 | 87.8 |
MS.gene025879.t1 | MTR_5g022600 | 33.939 | 165 | 95 | 5 | 22 | 174 | 8 | 170 | 6.03e-21 | 87.0 |
MS.gene025879.t1 | MTR_8g075240 | 33.939 | 165 | 95 | 5 | 22 | 174 | 8 | 170 | 6.04e-20 | 84.3 |
MS.gene025879.t1 | MTR_4g088055 | 37.190 | 121 | 73 | 3 | 22 | 141 | 8 | 126 | 6.56e-20 | 84.3 |
MS.gene025879.t1 | MTR_2g090875 | 32.121 | 165 | 98 | 5 | 22 | 174 | 8 | 170 | 1.34e-19 | 83.6 |
MS.gene025879.t1 | MTR_4g073250 | 37.815 | 119 | 71 | 3 | 22 | 139 | 8 | 124 | 3.56e-19 | 82.4 |
MS.gene025879.t1 | MTR_6g087980 | 38.017 | 121 | 72 | 3 | 22 | 141 | 8 | 126 | 5.64e-19 | 82.0 |
MS.gene025879.t1 | MTR_2g078000 | 63.265 | 49 | 18 | 0 | 81 | 129 | 46 | 94 | 2.72e-18 | 77.4 |
MS.gene025879.t1 | MTR_3g078260 | 32.727 | 165 | 97 | 5 | 22 | 174 | 10 | 172 | 7.13e-18 | 79.3 |
MS.gene025879.t1 | MTR_1452s0010 | 42.683 | 82 | 47 | 0 | 50 | 131 | 11 | 92 | 5.00e-17 | 74.3 |
MS.gene025879.t1 | MTR_3g078260 | 35.965 | 114 | 70 | 3 | 22 | 134 | 10 | 121 | 3.83e-16 | 73.2 |
MS.gene025879.t1 | MTR_4g113620 | 31.579 | 171 | 103 | 6 | 13 | 181 | 4 | 162 | 6.52e-16 | 73.9 |
MS.gene025879.t1 | MTR_1g059590 | 32.335 | 167 | 106 | 3 | 23 | 189 | 398 | 557 | 1.39e-15 | 75.5 |
MS.gene025879.t1 | MTR_1g059590 | 32.335 | 167 | 106 | 3 | 23 | 189 | 431 | 590 | 1.42e-15 | 75.5 |
MS.gene025879.t1 | MTR_1686s0010 | 36.905 | 84 | 53 | 0 | 48 | 131 | 9 | 92 | 4.34e-14 | 66.2 |
MS.gene025879.t1 | MTR_8g099250 | 51.724 | 58 | 28 | 0 | 5 | 62 | 1 | 58 | 1.59e-13 | 63.9 |
MS.gene025879.t1 | MTR_3g053480 | 49.180 | 61 | 31 | 0 | 5 | 65 | 1 | 61 | 1.86e-13 | 63.5 |
MS.gene025879.t1 | MTR_2g078560 | 58.696 | 46 | 19 | 0 | 82 | 127 | 54 | 99 | 2.01e-13 | 68.6 |
MS.gene025879.t1 | MTR_5g092060 | 29.814 | 161 | 103 | 3 | 21 | 174 | 105 | 262 | 9.73e-12 | 63.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene025879.t1 | AT1G01200 | 69.456 | 239 | 60 | 5 | 1 | 228 | 1 | 237 | 3.06e-115 | 329 |
MS.gene025879.t1 | AT5G65270 | 66.197 | 213 | 70 | 1 | 13 | 223 | 10 | 222 | 6.89e-102 | 295 |
MS.gene025879.t1 | AT4G39990 | 66.832 | 202 | 66 | 1 | 16 | 217 | 13 | 213 | 2.72e-96 | 280 |
MS.gene025879.t1 | AT3G12160 | 65.842 | 202 | 67 | 1 | 15 | 214 | 10 | 211 | 1.14e-94 | 276 |
MS.gene025879.t1 | AT5G47960 | 64.186 | 215 | 70 | 3 | 15 | 226 | 10 | 220 | 1.53e-93 | 273 |
MS.gene025879.t1 | AT1G09630 | 57.798 | 218 | 88 | 1 | 10 | 227 | 2 | 215 | 1.49e-90 | 266 |
MS.gene025879.t1 | AT4G18800 | 55.093 | 216 | 90 | 2 | 12 | 227 | 5 | 213 | 2.79e-83 | 247 |
MS.gene025879.t1 | AT5G45750 | 58.081 | 198 | 82 | 1 | 12 | 209 | 5 | 201 | 2.84e-82 | 244 |
MS.gene025879.t1 | AT1G07410 | 58.000 | 200 | 83 | 1 | 10 | 209 | 2 | 200 | 6.02e-82 | 244 |
MS.gene025879.t1 | AT5G60860 | 54.128 | 218 | 96 | 2 | 10 | 227 | 3 | 216 | 2.00e-81 | 243 |
MS.gene025879.t1 | AT5G59150 | 63.687 | 179 | 65 | 0 | 10 | 188 | 2 | 180 | 3.50e-81 | 242 |
MS.gene025879.t1 | AT3G15060 | 53.211 | 218 | 98 | 2 | 10 | 227 | 3 | 216 | 1.40e-80 | 240 |
MS.gene025879.t1 | AT1G16920 | 52.778 | 216 | 97 | 2 | 12 | 227 | 5 | 215 | 2.24e-80 | 240 |
MS.gene025879.t1 | AT4G18430 | 53.211 | 218 | 98 | 2 | 10 | 227 | 3 | 216 | 3.95e-80 | 239 |
MS.gene025879.t1 | AT3G46830 | 63.483 | 178 | 65 | 0 | 11 | 188 | 3 | 180 | 8.22e-80 | 238 |
MS.gene025879.t1 | AT3G46830 | 63.483 | 178 | 65 | 0 | 11 | 188 | 3 | 180 | 8.22e-80 | 238 |
MS.gene025879.t1 | AT1G28550 | 52.752 | 218 | 100 | 2 | 10 | 227 | 3 | 217 | 2.06e-79 | 237 |
MS.gene025879.t1 | AT1G06400 | 56.566 | 198 | 85 | 1 | 12 | 209 | 5 | 201 | 2.98e-79 | 237 |
MS.gene025879.t1 | AT2G33870 | 50.926 | 216 | 103 | 2 | 12 | 227 | 5 | 217 | 2.51e-77 | 232 |
MS.gene025879.t1 | AT5G47520 | 53.774 | 212 | 93 | 2 | 18 | 227 | 12 | 220 | 2.20e-75 | 227 |
MS.gene025879.t1 | AT3G07410 | 51.364 | 220 | 100 | 3 | 7 | 226 | 2 | 214 | 2.74e-72 | 219 |
MS.gene025879.t1 | AT1G05810 | 57.955 | 176 | 74 | 0 | 18 | 193 | 10 | 185 | 4.23e-72 | 219 |
MS.gene025879.t1 | AT1G05810 | 57.955 | 176 | 74 | 0 | 18 | 193 | 56 | 231 | 8.22e-72 | 220 |
MS.gene025879.t1 | AT2G43130 | 55.978 | 184 | 78 | 1 | 11 | 194 | 6 | 186 | 1.18e-71 | 218 |
MS.gene025879.t1 | AT1G73640 | 55.319 | 188 | 83 | 1 | 14 | 201 | 7 | 193 | 2.98e-71 | 217 |
MS.gene025879.t1 | AT2G31680 | 56.250 | 176 | 77 | 0 | 18 | 193 | 10 | 185 | 1.22e-70 | 215 |
MS.gene025879.t1 | AT1G18200 | 48.529 | 204 | 98 | 1 | 11 | 207 | 4 | 207 | 4.66e-67 | 206 |
MS.gene025879.t1 | AT4G17170 | 48.066 | 181 | 94 | 0 | 19 | 199 | 5 | 185 | 3.09e-58 | 183 |
MS.gene025879.t1 | AT4G35860 | 49.724 | 181 | 87 | 1 | 18 | 194 | 4 | 184 | 3.88e-58 | 183 |
MS.gene025879.t1 | AT4G17160 | 50.898 | 167 | 82 | 0 | 19 | 185 | 5 | 171 | 6.43e-56 | 177 |
MS.gene025879.t1 | AT3G11730 | 44.737 | 190 | 105 | 0 | 18 | 207 | 6 | 195 | 8.82e-55 | 174 |
MS.gene025879.t1 | AT4G17530 | 43.590 | 195 | 108 | 1 | 18 | 212 | 6 | 198 | 1.51e-52 | 169 |
MS.gene025879.t1 | AT5G47200 | 43.077 | 195 | 109 | 1 | 18 | 212 | 6 | 198 | 2.75e-52 | 168 |
MS.gene025879.t1 | AT5G59150 | 62.205 | 127 | 48 | 0 | 62 | 188 | 3 | 129 | 2.77e-52 | 167 |
MS.gene025879.t1 | AT1G02130 | 42.105 | 190 | 109 | 1 | 18 | 207 | 6 | 194 | 3.71e-52 | 167 |
MS.gene025879.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 4.34e-50 | 162 |
MS.gene025879.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 4.34e-50 | 162 |
MS.gene025879.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 4.34e-50 | 162 |
MS.gene025879.t1 | AT5G59840 | 41.117 | 197 | 110 | 2 | 18 | 213 | 13 | 204 | 8.49e-50 | 162 |
MS.gene025879.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 4.10e-48 | 157 |
MS.gene025879.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 4.10e-48 | 157 |
MS.gene025879.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 4.10e-48 | 157 |
MS.gene025879.t1 | AT3G09900 | 42.135 | 178 | 102 | 1 | 7 | 183 | 2 | 179 | 1.34e-47 | 156 |
MS.gene025879.t1 | AT3G54840 | 42.541 | 181 | 99 | 2 | 13 | 192 | 26 | 202 | 1.66e-47 | 155 |
MS.gene025879.t1 | AT4G19640 | 41.104 | 163 | 96 | 0 | 22 | 184 | 12 | 174 | 9.86e-47 | 154 |
MS.gene025879.t1 | AT3G54840 | 43.860 | 171 | 91 | 2 | 23 | 192 | 2 | 168 | 1.18e-46 | 152 |
MS.gene025879.t1 | AT5G03520 | 41.573 | 178 | 103 | 1 | 7 | 183 | 2 | 179 | 3.90e-46 | 152 |
MS.gene025879.t1 | AT3G54840 | 44.172 | 163 | 90 | 1 | 13 | 174 | 26 | 188 | 4.39e-46 | 152 |
MS.gene025879.t1 | AT5G45130 | 40.491 | 163 | 97 | 0 | 22 | 184 | 12 | 174 | 2.33e-45 | 150 |
MS.gene025879.t1 | AT5G45130 | 40.373 | 161 | 96 | 0 | 24 | 184 | 22 | 182 | 6.00e-44 | 147 |
MS.gene025879.t1 | AT4G35860 | 51.095 | 137 | 63 | 1 | 62 | 194 | 2 | 138 | 7.45e-44 | 145 |
MS.gene025879.t1 | AT1G43890 | 42.021 | 188 | 106 | 3 | 14 | 199 | 7 | 193 | 7.91e-44 | 146 |
MS.gene025879.t1 | AT1G43890 | 42.021 | 188 | 106 | 3 | 14 | 199 | 7 | 193 | 7.91e-44 | 146 |
MS.gene025879.t1 | AT1G43890 | 42.021 | 188 | 106 | 3 | 14 | 199 | 7 | 193 | 7.91e-44 | 146 |
MS.gene025879.t1 | AT5G10260 | 40.127 | 157 | 94 | 0 | 21 | 177 | 10 | 166 | 2.53e-42 | 142 |
MS.gene025879.t1 | AT2G44610 | 35.789 | 190 | 112 | 2 | 21 | 200 | 10 | 199 | 8.05e-41 | 139 |
MS.gene025879.t1 | AT5G03530 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 6.53e-40 | 136 |
MS.gene025879.t1 | AT5G03530 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 6.53e-40 | 136 |
MS.gene025879.t1 | AT2G22290 | 38.217 | 157 | 97 | 0 | 21 | 177 | 10 | 166 | 3.13e-39 | 134 |
MS.gene025879.t1 | AT4G39890 | 37.975 | 158 | 97 | 1 | 21 | 177 | 10 | 167 | 2.99e-38 | 132 |
MS.gene025879.t1 | AT3G09910 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 1.14e-37 | 130 |
MS.gene025879.t1 | AT3G09910 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 1.14e-37 | 130 |
MS.gene025879.t1 | AT3G09910 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 1.14e-37 | 130 |
MS.gene025879.t1 | AT3G09910 | 42.442 | 172 | 96 | 3 | 14 | 183 | 7 | 177 | 3.46e-37 | 129 |
MS.gene025879.t1 | AT3G09910 | 42.442 | 172 | 96 | 3 | 14 | 183 | 7 | 177 | 3.46e-37 | 129 |
MS.gene025879.t1 | AT5G64990 | 37.580 | 157 | 98 | 0 | 21 | 177 | 8 | 164 | 5.57e-37 | 129 |
MS.gene025879.t1 | AT4G19640 | 41.600 | 125 | 73 | 0 | 22 | 146 | 12 | 136 | 2.54e-35 | 123 |
MS.gene025879.t1 | AT4G19640 | 40.458 | 131 | 78 | 0 | 22 | 152 | 12 | 142 | 9.91e-35 | 122 |
MS.gene025879.t1 | AT5G03520 | 42.308 | 130 | 74 | 1 | 55 | 183 | 40 | 169 | 1.33e-34 | 122 |
MS.gene025879.t1 | AT5G64990 | 35.976 | 164 | 98 | 1 | 21 | 177 | 8 | 171 | 2.80e-34 | 122 |
MS.gene025879.t1 | AT1G52280 | 39.877 | 163 | 89 | 4 | 20 | 174 | 8 | 169 | 6.73e-32 | 115 |
MS.gene025879.t1 | AT3G18820 | 39.506 | 162 | 91 | 3 | 20 | 174 | 8 | 169 | 6.80e-32 | 115 |
MS.gene025879.t1 | AT4G09720 | 38.182 | 165 | 95 | 3 | 20 | 177 | 8 | 172 | 1.11e-31 | 115 |
MS.gene025879.t1 | AT1G22740 | 36.810 | 163 | 96 | 3 | 20 | 175 | 8 | 170 | 1.48e-31 | 115 |
MS.gene025879.t1 | AT2G21880 | 36.970 | 165 | 97 | 3 | 20 | 177 | 9 | 173 | 2.68e-31 | 114 |
MS.gene025879.t1 | AT4G09720 | 37.059 | 170 | 95 | 3 | 20 | 177 | 8 | 177 | 4.85e-31 | 114 |
MS.gene025879.t1 | AT1G49300 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 3.29e-30 | 111 |
MS.gene025879.t1 | AT1G49300 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 3.29e-30 | 111 |
MS.gene025879.t1 | AT4G09720 | 35.795 | 176 | 95 | 3 | 20 | 177 | 8 | 183 | 5.29e-30 | 111 |
MS.gene025879.t1 | AT3G16100 | 38.650 | 163 | 91 | 4 | 20 | 174 | 8 | 169 | 8.86e-30 | 110 |
MS.gene025879.t1 | AT5G39620 | 35.366 | 164 | 99 | 3 | 21 | 177 | 6 | 169 | 1.79e-26 | 101 |
MS.gene025879.t1 | AT5G55080 | 32.544 | 169 | 110 | 3 | 14 | 181 | 6 | 171 | 7.02e-25 | 98.2 |
MS.gene025879.t1 | AT5G20020 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 5.07e-23 | 93.2 |
MS.gene025879.t1 | AT5G55190 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 5.24e-23 | 93.2 |
MS.gene025879.t1 | AT5G20010 | 33.728 | 169 | 108 | 3 | 14 | 181 | 6 | 171 | 5.35e-23 | 93.2 |
MS.gene025879.t1 | AT2G21880 | 34.459 | 148 | 90 | 3 | 37 | 177 | 1 | 148 | 6.26e-23 | 92.0 |
MS.gene025879.t1 | AT2G21880 | 34.459 | 148 | 90 | 3 | 37 | 177 | 1 | 148 | 6.26e-23 | 92.0 |
MS.gene025879.t1 | AT5G46025 | 46.729 | 107 | 55 | 2 | 82 | 186 | 6 | 112 | 6.27e-23 | 90.1 |
MS.gene025879.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.01e-22 | 90.5 |
MS.gene025879.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.01e-22 | 90.5 |
MS.gene025879.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.01e-22 | 90.5 |
MS.gene025879.t1 | AT2G21880 | 32.121 | 165 | 97 | 4 | 20 | 177 | 9 | 165 | 1.29e-21 | 89.0 |
MS.gene025879.t1 | AT2G44690 | 34.545 | 165 | 94 | 5 | 22 | 174 | 20 | 182 | 1.90e-21 | 88.6 |
MS.gene025879.t1 | AT1G75840 | 33.939 | 165 | 95 | 5 | 22 | 174 | 8 | 170 | 7.63e-21 | 86.7 |
MS.gene025879.t1 | AT1G20090 | 33.333 | 165 | 96 | 5 | 22 | 174 | 7 | 169 | 1.92e-20 | 85.9 |
MS.gene025879.t1 | AT4G35020 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 4.12e-20 | 85.1 |
MS.gene025879.t1 | AT4G35020 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 4.12e-20 | 85.1 |
MS.gene025879.t1 | AT4G35020 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 4.12e-20 | 85.1 |
MS.gene025879.t1 | AT3G51300 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 1.18e-19 | 83.6 |
MS.gene025879.t1 | AT4G35950 | 33.939 | 165 | 95 | 5 | 22 | 174 | 8 | 170 | 1.44e-19 | 83.6 |
MS.gene025879.t1 | AT2G17800 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 2.17e-19 | 83.2 |
MS.gene025879.t1 | AT2G17800 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 2.17e-19 | 83.2 |
MS.gene025879.t1 | AT4G28950 | 29.442 | 197 | 122 | 6 | 21 | 202 | 7 | 201 | 7.51e-19 | 82.0 |
MS.gene025879.t1 | AT3G48040 | 30.049 | 203 | 124 | 6 | 22 | 212 | 10 | 206 | 7.43e-18 | 79.3 |
MS.gene025879.t1 | AT5G45970 | 35.537 | 121 | 75 | 3 | 22 | 141 | 8 | 126 | 9.14e-18 | 79.0 |
MS.gene025879.t1 | AT5G62880 | 30.387 | 181 | 98 | 5 | 22 | 183 | 10 | 181 | 1.49e-17 | 78.6 |
MS.gene025879.t1 | AT3G48040 | 37.190 | 121 | 73 | 3 | 22 | 141 | 10 | 128 | 2.16e-17 | 77.4 |
MS.gene025879.t1 | AT4G35020 | 35.965 | 114 | 70 | 3 | 22 | 134 | 8 | 119 | 5.10e-17 | 75.5 |
MS.gene025879.t1 | AT4G35020 | 35.965 | 114 | 70 | 3 | 22 | 134 | 8 | 119 | 5.10e-17 | 75.5 |
MS.gene025879.t1 | AT5G62880 | 34.000 | 150 | 87 | 5 | 22 | 170 | 10 | 148 | 5.43e-17 | 76.6 |
MS.gene025879.t1 | AT4G07524 | 66.667 | 33 | 11 | 0 | 44 | 76 | 2 | 34 | 4.84e-11 | 57.4 |
Find 45 sgRNAs with CRISPR-Local
Find 91 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAATAGATTATGTGTTTA+AGG | 0.114114 | 7.1:-596575 | MS.gene025879:CDS |
AACAATGTTGCTACACTTAA+AGG | 0.136675 | 7.1:-595118 | MS.gene025879:CDS |
ACTAGAACTGTCACAATTAA+TGG | 0.238881 | 7.1:-596445 | MS.gene025879:CDS |
CTTCCGTGTGCACCACTCTT+TGG | 0.290440 | 7.1:+595290 | None:intergenic |
ATTAGATTCTAACGACCTTT+TGG | 0.294249 | 7.1:+595150 | None:intergenic |
ATTGCTTGAAGAGATTAATA+AGG | 0.303173 | 7.1:-595179 | MS.gene025879:CDS |
TCCATCGTCATCATGCTAAT+TGG | 0.315923 | 7.1:-595334 | MS.gene025879:CDS |
GCATACTACAGAGGAGCATT+AGG | 0.316511 | 7.1:-595445 | MS.gene025879:CDS |
GGAAGAAAAGAAACCTTTCT+TGG | 0.341516 | 7.1:+596386 | None:intergenic |
AACTCATCAAAGCTCAGATC+TGG | 0.360411 | 7.1:-596420 | MS.gene025879:CDS |
CGTTTGATCATGTAGCTAGA+TGG | 0.371088 | 7.1:-595387 | MS.gene025879:CDS |
TGTGGAGTTTGCAGAGGATC+AGG | 0.380249 | 7.1:-595263 | MS.gene025879:CDS |
CATACTACAGAGGAGCATTA+GGG | 0.398256 | 7.1:-595444 | MS.gene025879:CDS |
GTGTTTAAGGTTGTTGTGAT+TGG | 0.414253 | 7.1:-596562 | MS.gene025879:CDS |
TTGATCGAAGAAAATGAATC+AGG | 0.424173 | 7.1:-596632 | None:intergenic |
CATGATGACGATGGAGTTGT+CGG | 0.445142 | 7.1:+595342 | None:intergenic |
ACAATGTTGCTACACTTAAA+GGG | 0.474727 | 7.1:-595117 | MS.gene025879:CDS |
TTTGACTCAAAATCAACCAT+TGG | 0.498039 | 7.1:-596481 | MS.gene025879:CDS |
TTAATAAGGTTGTCTCCAAA+AGG | 0.501126 | 7.1:-595165 | MS.gene025879:CDS |
GGGATACTGCTGGCCAAGAA+AGG | 0.510670 | 7.1:-596399 | MS.gene025879:intron |
AGGAGCATTAGGGGCCATGC+TGG | 0.520247 | 7.1:-595434 | MS.gene025879:CDS |
AGTCTGAAATTCAACTCCAA+TGG | 0.545485 | 7.1:+596465 | None:intergenic |
GTGGAGTTTGCAGAGGATCA+GGG | 0.547643 | 7.1:-595262 | MS.gene025879:CDS |
ACTCATCAAAGCTCAGATCT+GGG | 0.560858 | 7.1:-596419 | MS.gene025879:CDS |
GAAAGACTCAAATGCTGTCA+AGG | 0.561718 | 7.1:-596525 | MS.gene025879:CDS |
TCTGAGACTTCAGCGTTCAG+TGG | 0.562534 | 7.1:-595229 | MS.gene025879:CDS |
GCTCAGATCTGGGATACTGC+TGG | 0.566767 | 7.1:-596409 | MS.gene025879:CDS |
TGGTAACAAAGGTGATCTTG+TGG | 0.577617 | 7.1:-595314 | MS.gene025879:CDS |
TCATGTAGCTAGATGGATTG+AGG | 0.580303 | 7.1:-595380 | MS.gene025879:CDS |
GTGATTGGTGATTCAGCAGT+AGG | 0.583856 | 7.1:-596547 | MS.gene025879:CDS |
AAAATGAATCAGGAAATGAA+TGG | 0.586232 | 7.1:-596622 | MS.gene025879:CDS |
ATCATGCTAATTGGTAACAA+AGG | 0.587810 | 7.1:-595325 | MS.gene025879:CDS |
AGTTATGTCATACACCAGCA+TGG | 0.629305 | 7.1:+595420 | None:intergenic |
GGTGCACACGGAAGATGCTG+TGG | 0.634616 | 7.1:-595281 | MS.gene025879:CDS |
ACCAATTAGCATGATGACGA+TGG | 0.636916 | 7.1:+595333 | None:intergenic |
CTAGATCAACAAGAACATGA+AGG | 0.637055 | 7.1:+595037 | None:intergenic |
GAATCAGGAAATGAATGGTG+TGG | 0.639083 | 7.1:-596617 | MS.gene025879:CDS |
GGACCAAAGAGTGGTGCACA+CGG | 0.641793 | 7.1:-595293 | MS.gene025879:CDS |
AGATGCTGTGGAGTTTGCAG+AGG | 0.660975 | 7.1:-595269 | MS.gene025879:CDS |
ATACTACAGAGGAGCATTAG+GGG | 0.672037 | 7.1:-595443 | MS.gene025879:CDS |
TGAATGGTGTGGAAGCTGAA+AGG | 0.673720 | 7.1:-596606 | MS.gene025879:CDS |
CTAGATGGATTGAGGAACTG+CGG | 0.688972 | 7.1:-595372 | MS.gene025879:CDS |
TGATCTTGTGGACCAAAGAG+TGG | 0.691658 | 7.1:-595302 | MS.gene025879:CDS |
GTTACAAGTGCATACTACAG+AGG | 0.706445 | 7.1:-595454 | MS.gene025879:CDS |
ATAATAATATAGGTACAGAG+CGG | 0.790789 | 7.1:-595476 | MS.gene025879:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATATAATAATATAATAATAT+AGG | - | chr7.1:596175-596194 | MS.gene025879:intron | 0.0% |
!!! | TTTTCATTAAGAAAATTTAT+AGG | - | chr7.1:596033-596052 | MS.gene025879:intron | 10.0% |
!! | GATTTAGTTAGTAAAAAATT+TGG | - | chr7.1:595629-595648 | MS.gene025879:intron | 15.0% |
!! | GGTGAAAATATAAAAAATAA+AGG | - | chr7.1:595831-595850 | MS.gene025879:intron | 15.0% |
!! | TCAAAAATAGATATAATTTC+AGG | - | chr7.1:596567-596586 | MS.gene025879:CDS | 15.0% |
!! | ACAGAAATTTATTAATCACT+TGG | + | chr7.1:595698-595717 | None:intergenic | 20.0% |
!! | ACCTATAAATTAACATAATC+AGG | + | chr7.1:595857-595876 | None:intergenic | 20.0% |
!! | ATAATATAAAAGACATGTCT+CGG | - | chr7.1:596122-596141 | MS.gene025879:intron | 20.0% |
!! | CAGAAATTTATTAATCACTT+GGG | + | chr7.1:595697-595716 | None:intergenic | 20.0% |
!! | CTAAAAAAAGTTAAAAGTGA+TGG | + | chr7.1:595321-595340 | None:intergenic | 20.0% |
!! | CTAAATATGGCAATTATAAT+AGG | + | chr7.1:595469-595488 | None:intergenic | 20.0% |
!! | GAAAATAGATTATGTGTTTA+AGG | - | chr7.1:595086-595105 | MS.gene025879:CDS | 20.0% |
!! | GAAAATTGGTCATAATAATT+CGG | + | chr7.1:595785-595804 | None:intergenic | 20.0% |
! | ATAATAATATAGGTACAGAG+CGG | - | chr7.1:596185-596204 | MS.gene025879:intron | 25.0% |
! | ATTGCTTGAAGAGATTAATA+AGG | - | chr7.1:596482-596501 | MS.gene025879:CDS | 25.0% |
! | CAATTAGAGAAACATCTAAT+TGG | + | chr7.1:595970-595989 | None:intergenic | 25.0% |
! | CTTACTATAATTGCCATATT+TGG | - | chr7.1:595388-595407 | MS.gene025879:CDS | 25.0% |
! | GCCTGATTATGTTAATTTAT+AGG | - | chr7.1:595853-595872 | MS.gene025879:intron | 25.0% |
! | TATATTATCATGTGCATGTT+TGG | + | chr7.1:596110-596129 | None:intergenic | 25.0% |
! | TTCAAGTAAGAAACCAAATA+TGG | + | chr7.1:595404-595423 | None:intergenic | 25.0% |
!! | ACATAATCTATTTTCTCTTG+TGG | + | chr7.1:595081-595100 | None:intergenic | 25.0% |
!! | ATTAGATGCAACTAAAGTTT+TGG | + | chr7.1:595911-595930 | None:intergenic | 25.0% |
!! | TATTATGACCAATTTTCACT+AGG | - | chr7.1:595788-595807 | MS.gene025879:intron | 25.0% |
!!! | CAAATAGTAGAAAGTACTAA+TGG | - | chr7.1:595588-595607 | MS.gene025879:intron | 25.0% |
!!! | GATTTTGAATACATTGGTTT+TGG | + | chr7.1:595533-595552 | None:intergenic | 25.0% |
!!! | TAGGTTTTGTAAAATCATGT+TGG | - | chr7.1:596052-596071 | MS.gene025879:intron | 25.0% |
!!! | TTTTTTGTGTCTAAAGTTTG+TGG | + | chr7.1:595431-595450 | None:intergenic | 25.0% |
AACAATGTTGCTACACTTAA+AGG | - | chr7.1:596543-596562 | MS.gene025879:CDS | 30.0% | |
ACAATGTTGCTACACTTAAA+GGG | - | chr7.1:596544-596563 | MS.gene025879:CDS | 30.0% | |
ACTAGAACTGTCACAATTAA+TGG | - | chr7.1:595216-595235 | MS.gene025879:CDS | 30.0% | |
ATGTATTCAAAATCCCAATC+TGG | - | chr7.1:595539-595558 | MS.gene025879:intron | 30.0% | |
GGTAAGTAGGAAACTAAATA+TGG | + | chr7.1:595482-595501 | None:intergenic | 30.0% | |
TGTATTCAAAATCCCAATCT+GGG | - | chr7.1:595540-595559 | MS.gene025879:intron | 30.0% | |
TGTCAATAAGATAGCTCATT+CGG | + | chr7.1:595946-595965 | None:intergenic | 30.0% | |
TTAATAAGGTTGTCTCCAAA+AGG | - | chr7.1:596496-596515 | MS.gene025879:CDS | 30.0% | |
TTTGACTCAAAATCAACCAT+TGG | - | chr7.1:595180-595199 | MS.gene025879:CDS | 30.0% | |
! | ATCATGCTAATTGGTAACAA+AGG | - | chr7.1:596336-596355 | MS.gene025879:intron | 30.0% |
! | ATTAGATTCTAACGACCTTT+TGG | + | chr7.1:596514-596533 | None:intergenic | 30.0% |
! | GATTGGGATTTTGAATACAT+TGG | + | chr7.1:595539-595558 | None:intergenic | 30.0% |
!! | TGTAAAATCATGTTGGTTCA+AGG | - | chr7.1:596059-596078 | MS.gene025879:intron | 30.0% |
!!! | CATTGGTTTTGGTAGTTTTT+TGG | + | chr7.1:595522-595541 | None:intergenic | 30.0% |
!!! | GCAACTAAAGTTTTGGTTAT+AGG | + | chr7.1:595904-595923 | None:intergenic | 30.0% |
!!! | TTTTTTGGTCTGAAGTTTGT+GGG | + | chr7.1:595507-595526 | None:intergenic | 30.0% |
AGGTGATTTCAACAAATCCA+TGG | - | chr7.1:596079-596098 | MS.gene025879:intron | 35.0% | |
ATTTCAAGACAACCCAGATT+GGG | + | chr7.1:595555-595574 | None:intergenic | 35.0% | |
GGAAGAAAAGAAACCTTTCT+TGG | + | chr7.1:595278-595297 | None:intergenic | 35.0% | |
TATTTCAAGACAACCCAGAT+TGG | + | chr7.1:595556-595575 | None:intergenic | 35.0% | |
! | AATTTTCACTAGGAACCAGA+TGG | - | chr7.1:595798-595817 | MS.gene025879:intron | 35.0% |
! | AGTCTGAAATTCAACTCCAA+TGG | + | chr7.1:595199-595218 | None:intergenic | 35.0% |
! | ATCTGGTTCCTAGTGAAAAT+TGG | + | chr7.1:595799-595818 | None:intergenic | 35.0% |
! | GTGTTTAAGGTTGTTGTGAT+TGG | - | chr7.1:595099-595118 | MS.gene025879:CDS | 35.0% |
!!! | GTTTTTTGGTCTGAAGTTTG+TGG | + | chr7.1:595508-595527 | None:intergenic | 35.0% |
AACACATACAACTAGCCAAC+CGG | - | chr7.1:595663-595682 | MS.gene025879:intron | 40.0% | |
AACTCATCAAAGCTCAGATC+TGG | - | chr7.1:595241-595260 | MS.gene025879:CDS | 40.0% | |
AAGTTTGTGGGATGGTAAGT+AGG | + | chr7.1:595495-595514 | None:intergenic | 40.0% | |
AATCACTTGGGATCAACAAC+CGG | + | chr7.1:595685-595704 | None:intergenic | 40.0% | |
ACTCATCAAAGCTCAGATCT+GGG | - | chr7.1:595242-595261 | MS.gene025879:CDS | 40.0% | |
AGTTATGTCATACACCAGCA+TGG | + | chr7.1:596244-596263 | None:intergenic | 40.0% | |
CGTTTGATCATGTAGCTAGA+TGG | - | chr7.1:596274-596293 | MS.gene025879:intron | 40.0% | |
CTGAAGTCTCAGAGAAAAAG+AGG | + | chr7.1:596425-596444 | None:intergenic | 40.0% | |
GAAAGACTCAAATGCTGTCA+AGG | - | chr7.1:595136-595155 | MS.gene025879:CDS | 40.0% | |
GAATCAGGAAATGAATGGTG+TGG | - | chr7.1:595044-595063 | MS.gene025879:CDS | 40.0% | |
GACAAGCAAGTAAAACAGAG+AGG | + | chr7.1:595299-595318 | None:intergenic | 40.0% | |
GTGCATGTTTGGTATTTCCA+TGG | + | chr7.1:596099-596118 | None:intergenic | 40.0% | |
GTTACAAGTGCATACTACAG+AGG | - | chr7.1:596207-596226 | MS.gene025879:intron | 40.0% | |
TCACCTTAAGACAATCCATC+TGG | + | chr7.1:595816-595835 | None:intergenic | 40.0% | |
TCCATCGTCATCATGCTAAT+TGG | - | chr7.1:596327-596346 | MS.gene025879:intron | 40.0% | |
TGGTAACAAAGGTGATCTTG+TGG | - | chr7.1:596347-596366 | MS.gene025879:intron | 40.0% | |
! | ACCAATTAGCATGATGACGA+TGG | + | chr7.1:596331-596350 | None:intergenic | 40.0% |
!! | ATACTACAGAGGAGCATTAG+GGG | - | chr7.1:596218-596237 | MS.gene025879:intron | 40.0% |
!! | CATACTACAGAGGAGCATTA+GGG | - | chr7.1:596217-596236 | MS.gene025879:intron | 40.0% |
!! | GAACCAGATGGATTGTCTTA+AGG | - | chr7.1:595810-595829 | MS.gene025879:intron | 40.0% |
!! | TCATGTAGCTAGATGGATTG+AGG | - | chr7.1:596281-596300 | MS.gene025879:intron | 40.0% |
TGAATGGTGTGGAAGCTGAA+AGG | - | chr7.1:595055-595074 | MS.gene025879:CDS | 45.0% | |
TGATCTTGTGGACCAAAGAG+TGG | - | chr7.1:596359-596378 | MS.gene025879:intron | 45.0% | |
! | CATGATGACGATGGAGTTGT+CGG | + | chr7.1:596322-596341 | None:intergenic | 45.0% |
! | GTGATTGGTGATTCAGCAGT+AGG | - | chr7.1:595114-595133 | MS.gene025879:CDS | 45.0% |
! | TTGGTCTGAAGTTTGTGGGA+TGG | + | chr7.1:595503-595522 | None:intergenic | 45.0% |
!! | CTAGATGGATTGAGGAACTG+CGG | - | chr7.1:596289-596308 | MS.gene025879:intron | 45.0% |
!! | GCATACTACAGAGGAGCATT+AGG | - | chr7.1:596216-596235 | MS.gene025879:intron | 45.0% |
ACTTGGGATCAACAACCGGT+TGG | + | chr7.1:595681-595700 | None:intergenic | 50.0% | |
AGATGCTGTGGAGTTTGCAG+AGG | - | chr7.1:596392-596411 | MS.gene025879:intron | 50.0% | |
GTGGAGTTTGCAGAGGATCA+GGG | - | chr7.1:596399-596418 | MS.gene025879:intron | 50.0% | |
TGTGGAGTTTGCAGAGGATC+AGG | - | chr7.1:596398-596417 | MS.gene025879:intron | 50.0% | |
! | TCTGAGACTTCAGCGTTCAG+TGG | - | chr7.1:596432-596451 | MS.gene025879:CDS | 50.0% |
CTTCCGTGTGCACCACTCTT+TGG | + | chr7.1:596374-596393 | None:intergenic | 55.0% | |
GGACCAAAGAGTGGTGCACA+CGG | - | chr7.1:596368-596387 | MS.gene025879:intron | 55.0% | |
GGGATACTGCTGGCCAAGAA+AGG | - | chr7.1:595262-595281 | MS.gene025879:CDS | 55.0% | |
! | GCTCAGATCTGGGATACTGC+TGG | - | chr7.1:595252-595271 | MS.gene025879:CDS | 55.0% |
GGTGCACACGGAAGATGCTG+TGG | - | chr7.1:596380-596399 | MS.gene025879:intron | 60.0% | |
!! | AGGAGCATTAGGGGCCATGC+TGG | - | chr7.1:596227-596246 | MS.gene025879:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.1 | gene | 595042 | 596641 | 595042 | ID=MS.gene025879 |
chr7.1 | mRNA | 595042 | 596641 | 595042 | ID=MS.gene025879.t1;Parent=MS.gene025879 |
chr7.1 | exon | 596400 | 596641 | 596400 | ID=MS.gene025879.t1.exon1;Parent=MS.gene025879.t1 |
chr7.1 | CDS | 596400 | 596641 | 596400 | ID=cds.MS.gene025879.t1;Parent=MS.gene025879.t1 |
chr7.1 | exon | 595042 | 595486 | 595042 | ID=MS.gene025879.t1.exon2;Parent=MS.gene025879.t1 |
chr7.1 | CDS | 595042 | 595486 | 595042 | ID=cds.MS.gene025879.t1;Parent=MS.gene025879.t1 |
Gene Sequence |
Protein sequence |