AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene045532


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045532.t1 MTR_4g079350 100.000 217 0 0 1 217 1 217 1.29e-161 445
MS.gene045532.t1 MTR_4g088090 94.009 217 13 0 1 217 1 217 1.64e-154 427
MS.gene045532.t1 MTR_2g014990 93.548 217 14 0 1 217 1 217 7.08e-153 423
MS.gene045532.t1 MTR_2g090865 80.556 216 39 2 1 216 1 213 8.80e-128 359
MS.gene045532.t1 MTR_2g075950 76.256 219 48 3 1 217 1 217 4.93e-124 350
MS.gene045532.t1 MTR_2g083860 73.516 219 53 2 1 216 1 217 4.90e-116 330
MS.gene045532.t1 MTR_3g069510 67.130 216 67 2 3 216 2 215 1.55e-106 305
MS.gene045532.t1 MTR_2g005510 65.581 215 69 2 6 217 8 220 3.10e-105 302
MS.gene045532.t1 MTR_4g064897 67.593 216 65 3 3 216 2 214 1.62e-104 300
MS.gene045532.t1 MTR_1g052475 61.905 210 75 2 11 215 13 222 3.34e-93 272
MS.gene045532.t1 MTR_8g089985 58.796 216 85 1 6 217 10 225 2.84e-88 259
MS.gene045532.t1 MTR_0262s0050 60.190 211 78 3 11 217 13 221 3.03e-88 259
MS.gene045532.t1 MTR_6g079550 57.277 213 87 2 7 217 6 216 4.33e-88 259
MS.gene045532.t1 MTR_3g086980 55.814 215 88 2 6 215 9 221 8.09e-86 253
MS.gene045532.t1 MTR_8g027220 56.019 216 93 1 4 217 17 232 1.53e-85 253
MS.gene045532.t1 MTR_1g078200 56.604 212 86 3 11 216 12 223 5.27e-80 239
MS.gene045532.t1 MTR_7g405790 57.005 207 87 1 12 216 14 220 8.24e-80 238
MS.gene045532.t1 MTR_8g036220 51.982 227 98 4 1 216 1 227 1.15e-77 233
MS.gene045532.t1 MTR_7g051940 55.769 208 85 2 12 216 12 215 3.47e-76 229
MS.gene045532.t1 MTR_8g107070 56.731 208 85 2 7 211 8 213 4.40e-75 228
MS.gene045532.t1 MTR_7g117910 49.315 219 91 3 3 217 10 212 3.44e-68 208
MS.gene045532.t1 MTR_2g027660 47.143 210 107 2 10 216 3 211 2.00e-64 199
MS.gene045532.t1 MTR_6g021790 44.131 213 109 3 10 216 3 211 2.15e-61 191
MS.gene045532.t1 MTR_7g081700 46.445 211 103 1 7 217 2 202 4.22e-60 187
MS.gene045532.t1 MTR_8g006970 46.635 208 100 2 11 217 20 217 1.48e-57 181
MS.gene045532.t1 MTR_8g031660 46.190 210 104 4 10 216 3 206 3.20e-57 180
MS.gene045532.t1 MTR_1g068730 44.954 218 107 5 5 217 7 216 2.99e-56 178
MS.gene045532.t1 MTR_1g115325 44.340 212 105 4 9 215 11 214 1.30e-55 176
MS.gene045532.t1 MTR_1g068740 44.495 218 108 5 5 217 7 216 1.41e-55 176
MS.gene045532.t1 MTR_8g006970 53.012 166 78 0 9 174 4 169 1.03e-54 173
MS.gene045532.t1 MTR_7g100020 45.327 214 104 5 9 217 11 216 5.51e-54 172
MS.gene045532.t1 MTR_8g031870 51.266 158 77 0 12 169 5 162 1.33e-53 170
MS.gene045532.t1 MTR_8g031680 40.670 209 121 2 10 216 3 210 2.17e-53 171
MS.gene045532.t1 MTR_2g005500 42.654 211 110 2 6 215 2 202 1.08e-51 166
MS.gene045532.t1 MTR_4g063160 42.925 212 109 5 9 215 11 215 4.96e-50 162
MS.gene045532.t1 MTR_2g096550 39.631 217 116 4 4 215 6 212 1.09e-49 161
MS.gene045532.t1 MTR_3g064390 39.806 206 103 3 15 216 12 200 1.97e-49 160
MS.gene045532.t1 MTR_8g031830 49.673 153 77 0 12 164 5 157 2.69e-49 159
MS.gene045532.t1 MTR_5g076590 38.614 202 111 2 15 216 12 200 1.32e-48 158
MS.gene045532.t1 MTR_1g068730 56.349 126 55 0 5 130 7 132 1.96e-47 154
MS.gene045532.t1 MTR_1g094220 45.399 163 88 1 15 176 33 195 2.44e-47 155
MS.gene045532.t1 MTR_1g068740 56.349 126 55 0 5 130 7 132 2.62e-47 154
MS.gene045532.t1 MTR_8g093740 40.455 220 114 5 1 215 1 208 5.42e-47 154
MS.gene045532.t1 MTR_1g094220 45.570 158 85 1 15 171 33 190 4.59e-46 152
MS.gene045532.t1 MTR_3g096350 41.981 212 106 5 9 215 8 207 2.14e-45 150
MS.gene045532.t1 MTR_1g094220 46.753 154 81 1 15 167 33 186 2.51e-45 150
MS.gene045532.t1 MTR_1g029450 42.932 191 95 4 9 197 13 191 2.58e-45 150
MS.gene045532.t1 MTR_1g094220 43.575 179 91 2 15 192 33 202 5.37e-45 150
MS.gene045532.t1 MTR_2g102060 37.931 203 110 3 15 216 12 199 8.57e-45 148
MS.gene045532.t1 MTR_4g099470 42.529 174 90 1 44 217 15 178 2.16e-44 146
MS.gene045532.t1 MTR_7g103070 41.315 213 108 4 10 216 13 214 2.92e-44 147
MS.gene045532.t1 MTR_1g090717 46.893 177 91 3 6 179 8 184 1.23e-43 145
MS.gene045532.t1 MTR_1g062760 42.453 212 104 6 10 215 11 210 4.51e-43 144
MS.gene045532.t1 MTR_5g013900 34.715 193 108 1 14 206 10 184 9.05e-42 140
MS.gene045532.t1 MTR_8g103550 39.645 169 101 1 15 182 11 179 1.03e-41 140
MS.gene045532.t1 MTR_4g098950 33.161 193 111 1 14 206 10 184 1.19e-40 138
MS.gene045532.t1 MTR_3g087160 36.306 157 100 0 14 170 10 166 6.80e-39 133
MS.gene045532.t1 MTR_8g090215 32.124 193 113 1 14 206 10 184 8.30e-39 133
MS.gene045532.t1 MTR_2g101890 41.071 168 91 4 13 173 10 176 1.07e-37 130
MS.gene045532.t1 MTR_8g092020 41.975 162 87 3 13 167 12 173 1.56e-37 130
MS.gene045532.t1 MTR_4g069850 35.238 210 115 7 13 214 8 204 1.76e-37 130
MS.gene045532.t1 MTR_4g012940 40.741 162 89 3 13 167 8 169 9.40e-37 128
MS.gene045532.t1 MTR_3g064390 45.600 125 68 0 15 139 12 136 1.07e-36 126
MS.gene045532.t1 MTR_3g096350 52.846 123 55 3 9 129 8 129 1.25e-36 125
MS.gene045532.t1 MTR_1g097420 35.204 196 120 3 13 201 8 203 1.65e-36 127
MS.gene045532.t1 MTR_3g096350 52.846 123 55 3 9 129 8 129 2.35e-36 125
MS.gene045532.t1 MTR_6g039490 38.889 162 92 3 13 167 8 169 5.10e-33 119
MS.gene045532.t1 MTR_1g069245 65.263 95 29 2 26 120 109 199 8.70e-33 118
MS.gene045532.t1 MTR_8g093740 38.983 177 92 4 44 215 10 175 4.47e-32 115
MS.gene045532.t1 MTR_1g097420 31.193 218 116 4 13 196 8 225 2.24e-30 112
MS.gene045532.t1 MTR_7g103070 39.286 168 85 4 55 216 2 158 2.83e-30 110
MS.gene045532.t1 MTR_2g078000 87.755 49 6 0 74 122 46 94 9.67e-26 96.7
MS.gene045532.t1 MTR_3g107713 30.000 190 127 4 14 203 14 197 1.50e-24 96.7
MS.gene045532.t1 MTR_3g107707 30.000 190 127 4 14 203 14 197 1.50e-24 96.7
MS.gene045532.t1 MTR_3g107717 30.481 187 124 4 14 200 14 194 3.42e-24 95.9
MS.gene045532.t1 MTR_2g005500 31.959 194 91 2 6 198 2 155 1.33e-22 90.1
MS.gene045532.t1 MTR_8g031810 43.689 103 44 1 12 114 5 93 6.67e-22 86.3
MS.gene045532.t1 MTR_2g078560 84.783 46 7 0 75 120 54 99 1.33e-20 88.2
MS.gene045532.t1 MTR_4g088055 34.667 150 88 4 13 161 6 146 4.15e-20 84.7
MS.gene045532.t1 MTR_4g073250 34.000 150 89 4 13 161 6 146 4.24e-20 84.7
MS.gene045532.t1 MTR_1452s0010 43.038 79 45 0 33 111 1 79 5.22e-20 81.6
MS.gene045532.t1 MTR_6g087980 37.500 128 77 3 13 139 6 131 9.56e-20 84.0
MS.gene045532.t1 MTR_2g090875 36.567 134 82 3 13 145 6 137 2.11e-19 82.8
MS.gene045532.t1 MTR_5g022600 35.606 132 82 3 13 143 6 135 4.07e-19 82.0
MS.gene045532.t1 MTR_4g113620 26.425 193 127 5 14 206 14 191 4.19e-19 82.4
MS.gene045532.t1 MTR_8g075240 33.333 150 90 4 13 161 6 146 6.72e-19 81.3
MS.gene045532.t1 MTR_3g078260 28.177 181 116 5 13 181 8 186 1.18e-17 78.2
MS.gene045532.t1 MTR_3g053480 55.172 58 23 1 1 55 1 58 1.01e-15 69.3
MS.gene045532.t1 MTR_1g059590 33.140 172 105 5 10 181 428 589 1.75e-15 75.1
MS.gene045532.t1 MTR_1g059590 33.140 172 105 5 10 181 395 556 1.84e-15 74.7
MS.gene045532.t1 MTR_1686s0010 33.696 92 61 0 33 124 1 92 2.33e-15 69.3
MS.gene045532.t1 MTR_3g078260 33.621 116 74 3 13 127 8 121 6.26e-15 69.7
MS.gene045532.t1 MTR_8g099250 55.172 58 23 1 1 55 1 58 3.61e-14 65.5
MS.gene045532.t1 MTR_5g092060 25.521 192 134 4 3 187 95 284 8.04e-14 69.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene045532.t1 AT5G60860 94.444 216 12 0 1 216 1 216 3.29e-154 426
MS.gene045532.t1 AT3G15060 89.862 217 22 0 1 217 1 217 7.14e-148 410
MS.gene045532.t1 AT1G28550 88.532 218 24 1 1 217 1 218 2.51e-144 401
MS.gene045532.t1 AT2G33870 86.175 217 29 1 1 216 1 217 8.40e-140 390
MS.gene045532.t1 AT4G18430 81.567 217 40 0 1 217 1 217 5.78e-138 385
MS.gene045532.t1 AT4G18800 79.263 217 40 2 1 216 1 213 4.92e-127 357
MS.gene045532.t1 AT5G45750 77.880 217 45 2 1 216 1 215 7.57e-125 352
MS.gene045532.t1 AT1G16920 75.115 217 51 2 1 216 1 215 9.30e-121 342
MS.gene045532.t1 AT1G06400 72.811 217 56 2 1 216 1 215 1.52e-118 336
MS.gene045532.t1 AT1G09630 66.359 217 69 2 3 217 2 216 3.20e-106 305
MS.gene045532.t1 AT1G07410 64.186 215 73 2 3 216 2 213 7.48e-102 294
MS.gene045532.t1 AT5G59150 64.679 218 70 3 3 216 2 216 1.92e-98 285
MS.gene045532.t1 AT3G46830 63.303 218 73 3 4 217 3 217 5.30e-97 281
MS.gene045532.t1 AT3G46830 63.303 218 73 3 4 217 3 217 5.30e-97 281
MS.gene045532.t1 AT5G47960 64.455 211 66 3 11 215 13 220 2.90e-93 272
MS.gene045532.t1 AT3G12160 61.244 209 75 2 11 215 13 219 9.29e-92 268
MS.gene045532.t1 AT4G39990 59.524 210 81 3 11 217 15 223 9.24e-89 261
MS.gene045532.t1 AT5G47520 56.757 222 90 3 1 217 1 221 6.68e-85 251
MS.gene045532.t1 AT5G65270 56.604 212 87 1 11 217 15 226 1.66e-84 250
MS.gene045532.t1 AT1G05810 58.019 212 80 3 11 217 10 217 9.11e-80 238
MS.gene045532.t1 AT2G43130 55.556 216 87 3 6 216 2 213 1.21e-79 237
MS.gene045532.t1 AT1G05810 56.757 222 85 4 3 217 46 263 1.83e-79 239
MS.gene045532.t1 AT2G31680 55.502 209 91 1 11 217 10 218 3.69e-79 236
MS.gene045532.t1 AT1G73640 52.444 225 91 4 7 215 7 231 2.57e-78 234
MS.gene045532.t1 AT3G07410 57.005 207 88 1 11 216 10 216 4.75e-78 233
MS.gene045532.t1 AT1G01200 57.075 212 86 3 11 217 26 237 2.74e-75 227
MS.gene045532.t1 AT1G18200 57.459 181 77 0 1 181 1 181 6.24e-75 226
MS.gene045532.t1 AT5G59150 60.241 166 59 3 55 216 3 165 2.00e-64 197
MS.gene045532.t1 AT4G17170 45.933 209 111 1 10 216 3 211 2.65e-63 196
MS.gene045532.t1 AT4G35860 44.019 209 115 1 10 216 3 211 9.76e-62 192
MS.gene045532.t1 AT4G17160 43.689 206 112 1 10 215 3 204 7.14e-61 189
MS.gene045532.t1 AT1G02130 45.498 211 104 2 7 216 2 202 3.40e-58 182
MS.gene045532.t1 AT4G17530 44.076 211 108 1 7 217 2 202 3.03e-57 180
MS.gene045532.t1 AT5G47200 44.076 211 108 1 7 217 2 202 4.74e-57 179
MS.gene045532.t1 AT5G03520 45.833 216 105 4 5 216 7 214 1.55e-55 176
MS.gene045532.t1 AT3G46060 45.755 212 102 5 9 215 11 214 1.90e-54 173
MS.gene045532.t1 AT3G46060 45.755 212 102 5 9 215 11 214 1.90e-54 173
MS.gene045532.t1 AT3G46060 45.755 212 102 5 9 215 11 214 1.90e-54 173
MS.gene045532.t1 AT3G53610 43.868 212 106 3 9 215 11 214 4.74e-54 172
MS.gene045532.t1 AT3G53610 43.868 212 106 3 9 215 11 214 4.74e-54 172
MS.gene045532.t1 AT3G53610 43.868 212 106 3 9 215 11 214 4.74e-54 172
MS.gene045532.t1 AT5G59840 43.925 214 107 4 9 217 11 216 8.90e-54 172
MS.gene045532.t1 AT3G11730 46.286 175 94 0 8 182 3 177 8.76e-53 169
MS.gene045532.t1 AT3G09900 43.981 216 111 3 5 216 7 216 1.81e-52 168
MS.gene045532.t1 AT5G45130 41.089 202 106 3 15 216 12 200 2.09e-51 165
MS.gene045532.t1 AT5G45130 41.000 200 105 3 17 216 22 208 3.06e-50 162
MS.gene045532.t1 AT4G19640 45.399 163 89 0 15 177 12 174 9.77e-50 161
MS.gene045532.t1 AT1G43890 46.961 181 93 3 1 179 1 180 8.18e-49 159
MS.gene045532.t1 AT1G43890 46.961 181 93 3 1 179 1 180 8.18e-49 159
MS.gene045532.t1 AT1G43890 46.961 181 93 3 1 179 1 180 8.18e-49 159
MS.gene045532.t1 AT3G54840 46.626 163 86 1 15 176 35 197 8.04e-48 156
MS.gene045532.t1 AT3G54840 46.296 162 86 1 16 176 2 163 2.25e-47 154
MS.gene045532.t1 AT3G54840 48.052 154 79 1 15 167 35 188 2.80e-46 152
MS.gene045532.t1 AT5G03530 46.961 181 93 3 1 179 1 180 4.66e-46 152
MS.gene045532.t1 AT5G03530 46.961 181 93 3 1 179 1 180 4.66e-46 152
MS.gene045532.t1 AT4G35860 40.244 164 96 1 55 216 2 165 6.12e-43 142
MS.gene045532.t1 AT1G22740 42.593 162 86 3 13 167 8 169 3.83e-40 136
MS.gene045532.t1 AT2G44610 33.679 193 110 1 14 206 10 184 4.76e-40 136
MS.gene045532.t1 AT5G03520 42.197 173 88 4 48 216 40 204 3.28e-39 134
MS.gene045532.t1 AT1G52280 42.262 168 89 4 13 173 8 174 4.53e-39 134
MS.gene045532.t1 AT4G19640 45.802 131 71 0 15 145 12 142 5.88e-39 133
MS.gene045532.t1 AT2G22290 35.669 157 101 0 14 170 10 166 7.16e-39 133
MS.gene045532.t1 AT4G39890 37.342 158 98 1 14 170 10 167 8.22e-39 133
MS.gene045532.t1 AT3G09910 42.857 196 101 5 1 194 1 187 1.66e-38 132
MS.gene045532.t1 AT3G09910 42.857 196 101 5 1 194 1 187 1.66e-38 132
MS.gene045532.t1 AT4G19640 46.400 125 67 0 15 139 12 136 2.04e-38 130
MS.gene045532.t1 AT3G09910 39.726 219 116 6 1 217 1 205 4.38e-38 131
MS.gene045532.t1 AT3G09910 39.726 219 116 6 1 217 1 205 4.38e-38 131
MS.gene045532.t1 AT3G09910 39.726 219 116 6 1 217 1 205 4.38e-38 131
MS.gene045532.t1 AT5G10260 32.124 193 113 1 14 206 10 184 1.55e-37 130
MS.gene045532.t1 AT3G18820 36.190 210 113 7 13 214 8 204 1.73e-37 130
MS.gene045532.t1 AT3G16100 40.741 162 89 3 13 167 8 169 1.40e-36 127
MS.gene045532.t1 AT2G21880 40.000 165 92 3 13 170 9 173 2.29e-36 127
MS.gene045532.t1 AT5G64990 34.783 161 105 0 14 174 8 168 2.64e-36 127
MS.gene045532.t1 AT4G09720 38.788 165 94 2 13 170 8 172 4.47e-36 126
MS.gene045532.t1 AT5G46025 57.547 106 44 1 75 179 6 111 5.78e-36 123
MS.gene045532.t1 AT1G49300 33.971 209 119 5 13 214 8 204 1.83e-35 124
MS.gene045532.t1 AT1G49300 33.971 209 119 5 13 214 8 204 1.83e-35 124
MS.gene045532.t1 AT4G09720 37.059 170 95 2 13 170 8 177 1.28e-34 122
MS.gene045532.t1 AT5G64990 33.333 168 105 1 14 174 8 175 1.53e-33 120
MS.gene045532.t1 AT4G09720 35.795 176 95 2 13 170 8 183 1.73e-33 120
MS.gene045532.t1 AT5G39620 37.195 164 96 3 14 170 6 169 9.19e-32 115
MS.gene045532.t1 AT2G21880 37.162 148 86 3 30 170 1 148 3.25e-27 102
MS.gene045532.t1 AT2G21880 37.162 148 86 3 30 170 1 148 3.25e-27 102
MS.gene045532.t1 AT2G21880 35.152 165 92 4 13 170 9 165 1.79e-26 101
MS.gene045532.t1 AT4G09720 36.957 138 80 2 40 170 1 138 1.24e-24 95.9
MS.gene045532.t1 AT4G09720 36.957 138 80 2 40 170 1 138 1.24e-24 95.9
MS.gene045532.t1 AT4G09720 36.957 138 80 2 40 170 1 138 1.24e-24 95.9
MS.gene045532.t1 AT5G55190 29.744 195 131 4 14 208 14 202 1.71e-24 96.7
MS.gene045532.t1 AT5G20020 29.474 190 128 4 14 203 14 197 1.75e-24 96.7
MS.gene045532.t1 AT5G20010 30.000 190 127 4 14 203 14 197 1.81e-24 96.7
MS.gene045532.t1 AT5G55080 31.818 154 102 3 14 167 14 164 4.67e-24 95.5
MS.gene045532.t1 AT4G35020 36.667 150 85 4 13 161 6 146 5.73e-22 89.7
MS.gene045532.t1 AT4G35020 36.667 150 85 4 13 161 6 146 5.73e-22 89.7
MS.gene045532.t1 AT4G35020 36.667 150 85 4 13 161 6 146 5.73e-22 89.7
MS.gene045532.t1 AT2G44690 31.667 180 109 5 13 180 18 195 1.80e-20 85.9
MS.gene045532.t1 AT4G28950 38.333 120 71 3 13 131 6 123 1.47e-19 83.6
MS.gene045532.t1 AT1G75840 34.000 150 89 4 13 161 6 146 1.63e-19 83.2
MS.gene045532.t1 AT1G20090 33.333 150 90 4 13 161 5 145 3.09e-19 82.4
MS.gene045532.t1 AT5G45970 38.333 120 71 3 13 131 6 123 7.96e-19 81.3
MS.gene045532.t1 AT4G08190 53.521 71 30 1 97 167 60 127 9.69e-19 79.3
MS.gene045532.t1 AT2G17800 33.333 150 90 4 13 161 6 146 1.43e-18 80.5
MS.gene045532.t1 AT2G17800 33.333 150 90 4 13 161 6 146 1.43e-18 80.5
MS.gene045532.t1 AT3G51300 33.784 148 88 4 15 161 8 146 1.45e-18 80.5
MS.gene045532.t1 AT4G35950 33.333 150 90 4 13 161 6 146 3.62e-18 79.3
MS.gene045532.t1 AT3G48040 31.138 167 101 5 13 167 8 172 7.95e-18 79.0
MS.gene045532.t1 AT3G48040 34.615 130 82 3 13 141 8 135 2.38e-17 77.0
MS.gene045532.t1 AT5G62880 28.977 176 111 5 13 176 8 181 3.40e-17 77.4
MS.gene045532.t1 AT4G35020 36.885 122 74 3 15 135 8 127 3.57e-17 75.5
MS.gene045532.t1 AT4G35020 36.885 122 74 3 15 135 8 127 3.57e-17 75.5
MS.gene045532.t1 AT5G62880 35.000 120 75 3 13 131 8 125 9.75e-17 75.5
MS.gene045532.t1 AT3G21700 24.859 177 125 4 5 175 99 273 4.90e-11 61.2

Find 0 sgRNAs with CRISPR-Local

Find 143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATTATGCTATATATTTA+TGG + 31019:12835-12854 MS.gene045532:intron 10.0%
!!! TTTTCTTTTTGTTATAAAAT+AGG - 31019:13148-13167 None:intergenic 10.0%
!! TTATTAAAAAATGCAAACAT+AGG + 31019:12777-12796 MS.gene045532:intron 15.0%
!!! AAGTTTTGACTATTTTATTT+TGG + 31019:13794-13813 MS.gene045532:intron 15.0%
!! AAAAAAAAGGAAAGGATAAT+TGG - 31019:13413-13432 None:intergenic 20.0%
!! AAAAATCCCAAAAAAATCAA+AGG - 31019:12592-12611 None:intergenic 20.0%
!! TGAAAAATTGAGATTTGATT+TGG + 31019:12668-12687 MS.gene045532:intron 20.0%
!!! AACCTTATCTTTTATTAATG+CGG + 31019:13093-13112 MS.gene045532:intron 20.0%
!!! AATTTTGATGATACCTTTAA+TGG + 31019:13724-13743 MS.gene045532:intron 20.0%
!!! ATTAAAGGTATCATCAAAAT+TGG - 31019:13725-13744 None:intergenic 20.0%
! AAAATAGGTATCCTTTGTAT+TGG - 31019:13133-13152 None:intergenic 25.0%
! AAATAGGTATCCTTTGTATT+GGG - 31019:13132-13151 None:intergenic 25.0%
! AACATTGTAATTATGCTTGT+AGG + 31019:14039-14058 MS.gene045532:CDS 25.0%
! AAGTGCTTACTCAAATATAT+CGG + 31019:14193-14212 MS.gene045532:CDS 25.0%
! ACATTGTAATTATGCTTGTA+GGG + 31019:14040-14059 MS.gene045532:CDS 25.0%
! ATTGATGCAATTGATATGAT+TGG - 31019:13678-13697 None:intergenic 25.0%
! CCTGATATAAAAACCTAAAA+TGG - 31019:13045-13064 None:intergenic 25.0%
! TACAAGCATAATTACAATGT+TGG - 31019:14040-14059 None:intergenic 25.0%
! TTATGACATAGGAAACAAAT+TGG - 31019:13557-13576 None:intergenic 25.0%
!! ACCTTATCTTTTATTAATGC+GGG + 31019:13094-13113 MS.gene045532:intron 25.0%
!! ATTTGATGACTTCTGTAAAA+TGG + 31019:13174-13193 MS.gene045532:intron 25.0%
!! TGTTGCTTAAAAAAAAGGAA+AGG - 31019:13421-13440 None:intergenic 25.0%
!!! AAGAGAGAACACATTTTTTA+TGG + 31019:14125-14144 MS.gene045532:CDS 25.0%
!!! ACATGTAACTTTTGAAAATG+TGG + 31019:13978-13997 MS.gene045532:CDS 25.0%
!!! CCATTTTAGGTTTTTATATC+AGG + 31019:13042-13061 MS.gene045532:intron 25.0%
!!! CTAAATTCTTTGAAGTTTGA+AGG + 31019:13767-13786 MS.gene045532:intron 25.0%
!!! GGGTTTGGTTAAATTTTAAT+GGG + 31019:12630-12649 MS.gene045532:intron 25.0%
!!! GTATTTTTTATTCTACTGTG+CGG + 31019:13847-13866 MS.gene045532:intron 25.0%
!!! TAAGCCATTCACATTTTTTT+GGG + 31019:12802-12821 MS.gene045532:intron 25.0%
!!! TGATTTTTTTGGGATTTTTG+TGG + 31019:12593-12612 MS.gene045532:intron 25.0%
!!! TGTTGATGATAAGATTGTAA+AGG + 31019:12493-12512 MS.gene045532:CDS 25.0%
!!! TTAAGCCATTCACATTTTTT+TGG + 31019:12801-12820 MS.gene045532:intron 25.0%
!!! TTTGATCGCATTTCTTTTTT+TGG + 31019:12566-12585 MS.gene045532:intron 25.0%
!!! TTTTGGCCTTTGATTTTTTT+GGG + 31019:12583-12602 MS.gene045532:intron 25.0%
!!! TTTTTGGCCTTTGATTTTTT+TGG + 31019:12582-12601 MS.gene045532:intron 25.0%
AGGTTTGATTAGAGTTTGTA+AGG - 31019:13078-13097 None:intergenic 30.0%
AGTGCTTACTCAAATATATC+GGG + 31019:14194-14213 MS.gene045532:CDS 30.0%
ATGATACCTTTAATGGTTGA+GGG + 31019:13731-13750 MS.gene045532:intron 30.0%
ATTATTTCCCAATTCACACA+AGG - 31019:13334-13353 None:intergenic 30.0%
CACAAAAAACGAATTCAGTT+TGG + 31019:12424-12443 MS.gene045532:CDS 30.0%
GATAAAAACGTAACCTTTCT+TGG - 31019:12541-12560 None:intergenic 30.0%
GTCAACATTCAATGATTCAA+GGG - 31019:14160-14179 None:intergenic 30.0%
TAGTCTATCAATCTGTACAA+AGG + 31019:13699-13718 MS.gene045532:intron 30.0%
TCATAAAAGTGACATCAGTT+TGG + 31019:13571-13590 MS.gene045532:intron 30.0%
TCCCGCATTAATAAAAGATA+AGG - 31019:13098-13117 None:intergenic 30.0%
TGTCAACATTCAATGATTCA+AGG - 31019:14161-14180 None:intergenic 30.0%
TTGAGTTTATCCCAATACAA+AGG + 31019:13119-13138 MS.gene045532:intron 30.0%
TTGTCCCAAAAAAATGTGAA+TGG - 31019:12809-12828 None:intergenic 30.0%
TTTGCAAAAACAAACGAATG+TGG - 31019:13382-13401 None:intergenic 30.0%
! CACAAAGTATTTGGTAGATT+GGG + 31019:12953-12972 MS.gene045532:intron 30.0%
! CAGCATGTTGCTTAAAAAAA+AGG - 31019:13426-13445 None:intergenic 30.0%
!! ATAGGCTTTGATACCATTTT+AGG + 31019:13029-13048 MS.gene045532:intron 30.0%
!! GGGGTTTGGTTAAATTTTAA+TGG + 31019:12629-12648 MS.gene045532:intron 30.0%
!!! CTTCCTAATGTCAACTTTTT+TGG - 31019:13601-13620 None:intergenic 30.0%
!!! TGATGTCACTTTTATGACAT+AGG - 31019:13568-13587 None:intergenic 30.0%
AAATATATCGGGTCGTTAGT+AGG + 31019:14205-14224 MS.gene045532:CDS 35.0%
AAATGCTTTAGCATCATCTG+TGG - 31019:14100-14119 None:intergenic 35.0%
AAATGTGGAGAGATGGTTAA+AGG + 31019:13993-14012 MS.gene045532:CDS 35.0%
AAGGAAAGGATAATTGGAAG+TGG - 31019:13407-13426 None:intergenic 35.0%
AAGTTTATTGAGAAGTCGTG+TGG - 31019:13497-13516 None:intergenic 35.0%
AATTATGCTTGTAGGGAACA+AGG + 31019:14047-14066 MS.gene045532:CDS 35.0%
CCTCCAAAAAAGTTGACATT+AGG + 31019:13595-13614 MS.gene045532:intron 35.0%
CTCTTCAAGGTTGTTCTTAT+CGG + 31019:12362-12381 MS.gene045532:CDS 35.0%
GACTTCTGTAAAATGGTGAA+TGG + 31019:13181-13200 MS.gene045532:intron 35.0%
GAGATAATCGTAGTCATCAT+CGG - 31019:12345-12364 None:intergenic 35.0%
GATGATACCTTTAATGGTTG+AGG + 31019:13730-13749 MS.gene045532:intron 35.0%
GTAACTCATCTCTACAAAAG+CGG + 31019:12977-12996 MS.gene045532:intron 35.0%
TATCTCTCCTTGTGTGAATT+GGG + 31019:13324-13343 MS.gene045532:intron 35.0%
TGACTACGATTATCTCTTCA+AGG + 31019:12349-12368 MS.gene045532:CDS 35.0%
TGATGTCTCAGCTGTTAAAA+AGG + 31019:14299-14318 MS.gene045532:CDS 35.0%
TGTGAAACGTGATAAGAGAT+TGG - 31019:12408-12427 None:intergenic 35.0%
TTGGAATCTAAATCCACCAT+TGG + 31019:12443-12462 MS.gene045532:CDS 35.0%
! AGATTGTAAAGGCGCAAATT+TGG + 31019:12504-12523 MS.gene045532:CDS 35.0%
! ATTGAAAGCTTTATGTTGCC+AGG + 31019:13204-13223 MS.gene045532:intron 35.0%
! GATTGTAAAGGCGCAAATTT+GGG + 31019:12505-12524 MS.gene045532:CDS 35.0%
! GCACAAAGTATTTGGTAGAT+TGG + 31019:12952-12971 MS.gene045532:intron 35.0%
! GTGATGATGATGAATGATGT+TGG + 31019:12690-12709 MS.gene045532:intron 35.0%
! TTGAAAGCTTTATGTTGCCA+GGG + 31019:13205-13224 MS.gene045532:intron 35.0%
! TTTTGTGGAGCGAATTTTAG+TGG + 31019:12608-12627 MS.gene045532:intron 35.0%
!! AGGAAACAAATTGGTGTCAA+TGG - 31019:13548-13567 None:intergenic 35.0%
!! CTTTTGAAAATGTGGAGAGA+TGG + 31019:13986-14005 MS.gene045532:CDS 35.0%
!! GATCTGGATGATTTTGACAT+TGG + 31019:12726-12745 MS.gene045532:intron 35.0%
!! TCATCTACCCAGTTGATTTT+GGG - 31019:13451-13470 None:intergenic 35.0%
!! TTTGTGGAGCGAATTTTAGT+GGG + 31019:12609-12628 MS.gene045532:intron 35.0%
!!! CCTAATGTCAACTTTTTTGG+AGG - 31019:13598-13617 None:intergenic 35.0%
AAAAGTTGCACTATTACCCG+AGG + 31019:12883-12902 MS.gene045532:intron 40.0%
AAAGGGCAGACAATCAATGT+TGG + 31019:14267-14286 MS.gene045532:CDS 40.0%
AAAGTTGCACTATTACCCGA+GGG + 31019:12884-12903 MS.gene045532:intron 40.0%
AGAACAGTTCTGTAGTGTAG+AGG + 31019:13290-13309 MS.gene045532:intron 40.0%
AGTAGGAAGACTCTTGAGAT+TGG + 31019:14222-14241 MS.gene045532:CDS 40.0%
ATCACAAGTGCATATTACCG+AGG + 31019:13919-13938 MS.gene045532:CDS 40.0%
GTAGTGTAGAGGAAGGTTTA+GGG + 31019:13301-13320 MS.gene045532:intron 40.0%
GTATCTCTCCTTGTGTGAAT+TGG + 31019:13323-13342 MS.gene045532:intron 40.0%
GTCTCAGCTGTTAAAAAGGT+TGG + 31019:14303-14322 MS.gene045532:CDS 40.0%
GTTAGTCCCTCAACCATTAA+AGG - 31019:13740-13759 None:intergenic 40.0%
TGTAGCGAATTCAACACCAA+TGG - 31019:12462-12481 None:intergenic 40.0%
TGTAGTGTAGAGGAAGGTTT+AGG + 31019:13300-13319 MS.gene045532:intron 40.0%
TGTCAGCTTTGCATGATTGA+AGG - 31019:13643-13662 None:intergenic 40.0%
TTACAATGTTGGCATCTGTG+TGG - 31019:14029-14048 None:intergenic 40.0%
TTTAGCATCATCTGTGGACA+CGG - 31019:14094-14113 None:intergenic 40.0%
! ACATTGATTGTCTGCCCTTT+CGG - 31019:14267-14286 None:intergenic 40.0%
!! AAAAGCGGATTGTAAGGTGA+GGG + 31019:12992-13011 MS.gene045532:intron 40.0%
!! CTCTACAAAAGCGGATTGTA+AGG + 31019:12986-13005 MS.gene045532:intron 40.0%
!! GTCATCTACCCAGTTGATTT+TGG - 31019:13452-13471 None:intergenic 40.0%
!! TGGCTGCATGAATTTTGATC+TGG + 31019:12710-12729 MS.gene045532:intron 40.0%
!! TTGGTGTTGAATTCGCTACA+CGG + 31019:12462-12481 MS.gene045532:CDS 40.0%
!! TTGTGGAGCGAATTTTAGTG+GGG + 31019:12610-12629 MS.gene045532:intron 40.0%
!!! CCATGGTAGATGGTTTTGTT+GGG + 31019:13242-13261 MS.gene045532:intron 40.0%
AGCGAATTCAACACCAATGG+TGG - 31019:12459-12478 None:intergenic 45.0%
ATGCTGCTCCCAAAATCAAC+TGG + 31019:13440-13459 MS.gene045532:intron 45.0%
CAGTTCTGTAGTGTAGAGGA+AGG + 31019:13294-13313 MS.gene045532:intron 45.0%
CCAAATACTTTGTGCGCAAC+TGG - 31019:12947-12966 None:intergenic 45.0%
CCCAACAAAACCATCTACCA+TGG - 31019:13245-13264 None:intergenic 45.0%
GTTGTTCTTATCGGTGACTC+CGG + 31019:12371-12390 MS.gene045532:CDS 45.0%
TGCTGCTCCCAAAATCAACT+GGG + 31019:13441-13460 MS.gene045532:intron 45.0%
TGGCTCAAAAGTCAAAACCC+TGG - 31019:13225-13244 None:intergenic 45.0%
! CCAGTTGCGCACAAAGTATT+TGG + 31019:12944-12963 MS.gene045532:intron 45.0%
! GACTTTTGAGCCATGGTAGA+TGG + 31019:13232-13251 MS.gene045532:intron 45.0%
!! AAAGCGGATTGTAAGGTGAG+GGG + 31019:12993-13012 MS.gene045532:intron 45.0%
!! CAAAAGCGGATTGTAAGGTG+AGG + 31019:12991-13010 MS.gene045532:intron 45.0%
!! GAGCGAATTTTAGTGGGGTT+TGG + 31019:12615-12634 MS.gene045532:intron 45.0%
!!! GCCATGGTAGATGGTTTTGT+TGG + 31019:13241-13260 MS.gene045532:intron 45.0%
!!! GGGTTTTGACTTTTGAGCCA+TGG + 31019:13225-13244 MS.gene045532:intron 45.0%
!!! GTAGATGGTTTTGTTGGGAG+AGG + 31019:13247-13266 MS.gene045532:intron 45.0%
ACGTAACCTTTCTTGGCCAG+CGG - 31019:12534-12553 None:intergenic 50.0%
GAGATTGGATTTACCGACGC+CGG - 31019:12393-12412 None:intergenic 50.0%
GCATATTACCGAGGAGCTGT+TGG + 31019:13928-13947 MS.gene045532:CDS 50.0%
GCGCTTGGATGAGATGGTTT+AGG + 31019:12906-12925 MS.gene045532:intron 50.0%
!! AAGCGGATTGTAAGGTGAGG+GGG + 31019:12994-13013 MS.gene045532:intron 50.0%
GCAATGCACCAACAGCTCCT+CGG - 31019:13939-13958 None:intergenic 55.0%
TGTAAGGTGAGGGGGTGACT+CGG + 31019:13002-13021 MS.gene045532:intron 55.0%
! GCGCAAATTTGGGATACCGC+TGG + 31019:12515-12534 MS.gene045532:CDS 55.0%
!! ACCCTGCTGCTTTGCCGAAA+GGG + 31019:14250-14269 MS.gene045532:CDS 55.0%
CATCTCATCCAAGCGCCCTC+GGG - 31019:12902-12921 None:intergenic 60.0%
CCATCTCATCCAAGCGCCCT+CGG - 31019:12903-12922 None:intergenic 60.0%
CTTATCGGTGACTCCGGCGT+CGG + 31019:12377-12396 MS.gene045532:CDS 60.0%
GCCCTTTCGGCAAAGCAGCA+GGG - 31019:14254-14273 None:intergenic 60.0%
GGGATACCGCTGGCCAAGAA+AGG + 31019:12525-12544 MS.gene045532:CDS 60.0%
TGCCCTTTCGGCAAAGCAGC+AGG - 31019:14255-14274 None:intergenic 60.0%
! AGGGGGTGACTCGGAACGAT+AGG + 31019:13011-13030 MS.gene045532:intron 60.0%
!! CACTATTACCCGAGGGCGCT+TGG + 31019:12891-12910 MS.gene045532:intron 60.0%
!! GACCCTGCTGCTTTGCCGAA+AGG + 31019:14249-14268 MS.gene045532:CDS 60.0%
!! CCGAGGGCGCTTGGATGAGA+TGG + 31019:12900-12919 MS.gene045532:intron 65.0%


Chromosome Type Strat End Strand Name
31019 gene 12326 14341 12326 ID=MS.gene045532
31019 mRNA 12326 14341 12326 ID=MS.gene045532.t1;Parent=MS.gene045532
31019 exon 12326 12546 12326 ID=MS.gene045532.t1.exon1;Parent=MS.gene045532.t1
31019 CDS 12326 12546 12326 ID=cds.MS.gene045532.t1;Parent=MS.gene045532.t1
31019 exon 13909 14341 13909 ID=MS.gene045532.t1.exon2;Parent=MS.gene045532.t1
31019 CDS 13909 14341 13909 ID=cds.MS.gene045532.t1;Parent=MS.gene045532.t1
Gene Sequence

>MS.gene045532

ATGGGTGCGTACAGAGCCGATGATGACTACGATTATCTCTTCAAGGTTGTTCTTATCGGTGACTCCGGCGTCGGTAAATCCAATCTCTTATCACGTTTCACAAAAAACGAATTCAGTTTGGAATCTAAATCCACCATTGGTGTTGAATTCGCTACACGGAGTATTCATGTTGATGATAAGATTGTAAAGGCGCAAATTTGGGATACCGCTGGCCAAGAAAGGTTACGTTTTTATCTTCGCTTTGATCGCATTTCTTTTTTTGGCCTTTGATTTTTTTGGGATTTTTGTGGAGCGAATTTTAGTGGGGTTTGGTTAAATTTTAATGGGTCTTGATTATTTTATTGAAAAATTGAGATTTGATTTGGTGATGATGATGAATGATGTTGGCTGCATGAATTTTGATCTGGATGATTTTGACATTGGAAAATTAAGCATTGTGTTGTTGTTGTTGTTATTAAAAAATGCAAACATAGGATTAAGCCATTCACATTTTTTTGGGACAATGTTGCTAAATTATGCTATATATTTATGGCTTACTTGATTGATTTATGTATTGAAAAAGTTGCACTATTACCCGAGGGCGCTTGGATGAGATGGTTTAGGTCTCTACTAGTTTAACCAGTTGCGCACAAAGTATTTGGTAGATTGGGCGTAACTCATCTCTACAAAAGCGGATTGTAAGGTGAGGGGGTGACTCGGAACGATAGGCTTTGATACCATTTTAGGTTTTTATATCAGGACTAACTCATCCTTACAAACTCTAATCAAACCTTATCTTTTATTAATGCGGGACTTGAGTTTATCCCAATACAAAGGATACCTATTTTATAACAAAAAGAAAATCTCACATTTGATGACTTCTGTAAAATGGTGAATGGATTGAAAGCTTTATGTTGCCAGGGTTTTGACTTTTGAGCCATGGTAGATGGTTTTGTTGGGAGAGGATGCATCATACTCGTATCGTAGAACAGTTCTGTAGTGTAGAGGAAGGTTTAGGGTATCTCTCCTTGTGTGAATTGGGAAATAATAGACGAGTTTGCTCGTTTATTTCTTCCACATTCGTTTGTTTTTGCAAAATCCACTTCCAATTATCCTTTCCTTTTTTTTAAGCAACATGCTGCTCCCAAAATCAACTGGGTAGATGACATGAGATAAAAAGTTAAATTGACCACACGACTTCTCAATAAACTTTTTATTGAGAAAATAAAGTTATAAACAACCATTGACACCAATTTGTTTCCTATGTCATAAAAGTGACATCAGTTTGGTCCTCCAAAAAAGTTGACATTAGGAAGTACTTCAATCAAATCTACTCCTTCAATCATGCAAAGCTGACATTAATTTAGTCACCAATCATATCAATTGCATCAATTTAGTCTATCAATCTGTACAAAGGCCAATTTTGATGATACCTTTAATGGTTGAGGGACTAACTTGATCTCTAAATTCTTTGAAGTTTGAAGGACTGAAGTTTTGACTATTTTATTTTGGAAGACTAAATATGAGTTTTTTATTACTGTTGTATTTTTTATTCTACTGTGCGGTATATATGCATCTCATTTTTGTAATTTTCATTTCTACAGATATCGCGCAATCACAAGTGCATATTACCGAGGAGCTGTTGGTGCATTGCTTGTGTATGATGTTACAAGACATGTAACTTTTGAAAATGTGGAGAGATGGTTAAAGGAACTTCGTGACCACACAGATGCCAACATTGTAATTATGCTTGTAGGGAACAAGGCTGATCTTCGTCACTTGCGTGCCGTGTCCACAGATGATGCTAAAGCATTTGCTGAAAGAGAGAACACATTTTTTATGGAAACGTCTGCCCTTGAATCATTGAATGTTGACAATTCTTTCACAGAAGTGCTTACTCAAATATATCGGGTCGTTAGTAGGAAGACTCTTGAGATTGGAGATGACCCTGCTGCTTTGCCGAAAGGGCAGACAATCAATGTTGGCAGTAGAGATGATGTCTCAGCTGTTAAAAAGGTTGGATGCTGCTCTGCATAG

Protein sequence

>MS.gene045532.t1

MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKADLRHLRAVSTDDAKAFAERENTFFMETSALESLNVDNSFTEVLTQIYRVVSRKTLEIGDDPAALPKGQTINVGSRDDVSAVKKVGCCSA