Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006652.t1 | XP_003607539.1 | 100 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 2.10E-116 | 428.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006652.t1 | Q9FJH0 | 94.4 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 1.8e-113 | 409.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006652.t1 | G7JUZ6 | 100.0 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.5e-116 | 428.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006652.t1 | MTR_4g079350 | 100.000 | 217 | 0 | 0 | 1 | 217 | 1 | 217 | 1.29e-161 | 445 |
MS.gene006652.t1 | MTR_4g088090 | 94.009 | 217 | 13 | 0 | 1 | 217 | 1 | 217 | 1.64e-154 | 427 |
MS.gene006652.t1 | MTR_2g014990 | 93.548 | 217 | 14 | 0 | 1 | 217 | 1 | 217 | 7.08e-153 | 423 |
MS.gene006652.t1 | MTR_2g090865 | 80.556 | 216 | 39 | 2 | 1 | 216 | 1 | 213 | 8.80e-128 | 359 |
MS.gene006652.t1 | MTR_2g075950 | 76.256 | 219 | 48 | 3 | 1 | 217 | 1 | 217 | 4.93e-124 | 350 |
MS.gene006652.t1 | MTR_2g083860 | 73.516 | 219 | 53 | 2 | 1 | 216 | 1 | 217 | 4.90e-116 | 330 |
MS.gene006652.t1 | MTR_3g069510 | 67.130 | 216 | 67 | 2 | 3 | 216 | 2 | 215 | 1.55e-106 | 305 |
MS.gene006652.t1 | MTR_2g005510 | 65.581 | 215 | 69 | 2 | 6 | 217 | 8 | 220 | 3.10e-105 | 302 |
MS.gene006652.t1 | MTR_4g064897 | 67.593 | 216 | 65 | 3 | 3 | 216 | 2 | 214 | 1.62e-104 | 300 |
MS.gene006652.t1 | MTR_1g052475 | 61.905 | 210 | 75 | 2 | 11 | 215 | 13 | 222 | 3.34e-93 | 272 |
MS.gene006652.t1 | MTR_8g089985 | 58.796 | 216 | 85 | 1 | 6 | 217 | 10 | 225 | 2.84e-88 | 259 |
MS.gene006652.t1 | MTR_0262s0050 | 60.190 | 211 | 78 | 3 | 11 | 217 | 13 | 221 | 3.03e-88 | 259 |
MS.gene006652.t1 | MTR_6g079550 | 57.277 | 213 | 87 | 2 | 7 | 217 | 6 | 216 | 4.33e-88 | 259 |
MS.gene006652.t1 | MTR_3g086980 | 55.814 | 215 | 88 | 2 | 6 | 215 | 9 | 221 | 8.09e-86 | 253 |
MS.gene006652.t1 | MTR_8g027220 | 56.019 | 216 | 93 | 1 | 4 | 217 | 17 | 232 | 1.53e-85 | 253 |
MS.gene006652.t1 | MTR_1g078200 | 56.604 | 212 | 86 | 3 | 11 | 216 | 12 | 223 | 5.27e-80 | 239 |
MS.gene006652.t1 | MTR_7g405790 | 57.005 | 207 | 87 | 1 | 12 | 216 | 14 | 220 | 8.24e-80 | 238 |
MS.gene006652.t1 | MTR_8g036220 | 51.982 | 227 | 98 | 4 | 1 | 216 | 1 | 227 | 1.15e-77 | 233 |
MS.gene006652.t1 | MTR_7g051940 | 55.769 | 208 | 85 | 2 | 12 | 216 | 12 | 215 | 3.47e-76 | 229 |
MS.gene006652.t1 | MTR_8g107070 | 56.731 | 208 | 85 | 2 | 7 | 211 | 8 | 213 | 4.40e-75 | 228 |
MS.gene006652.t1 | MTR_7g117910 | 49.315 | 219 | 91 | 3 | 3 | 217 | 10 | 212 | 3.44e-68 | 208 |
MS.gene006652.t1 | MTR_2g027660 | 47.143 | 210 | 107 | 2 | 10 | 216 | 3 | 211 | 2.00e-64 | 199 |
MS.gene006652.t1 | MTR_6g021790 | 44.131 | 213 | 109 | 3 | 10 | 216 | 3 | 211 | 2.15e-61 | 191 |
MS.gene006652.t1 | MTR_7g081700 | 46.445 | 211 | 103 | 1 | 7 | 217 | 2 | 202 | 4.22e-60 | 187 |
MS.gene006652.t1 | MTR_8g006970 | 46.635 | 208 | 100 | 2 | 11 | 217 | 20 | 217 | 1.48e-57 | 181 |
MS.gene006652.t1 | MTR_8g031660 | 46.190 | 210 | 104 | 4 | 10 | 216 | 3 | 206 | 3.20e-57 | 180 |
MS.gene006652.t1 | MTR_1g068730 | 44.954 | 218 | 107 | 5 | 5 | 217 | 7 | 216 | 2.99e-56 | 178 |
MS.gene006652.t1 | MTR_1g115325 | 44.340 | 212 | 105 | 4 | 9 | 215 | 11 | 214 | 1.30e-55 | 176 |
MS.gene006652.t1 | MTR_1g068740 | 44.495 | 218 | 108 | 5 | 5 | 217 | 7 | 216 | 1.41e-55 | 176 |
MS.gene006652.t1 | MTR_8g006970 | 53.012 | 166 | 78 | 0 | 9 | 174 | 4 | 169 | 1.03e-54 | 173 |
MS.gene006652.t1 | MTR_7g100020 | 45.327 | 214 | 104 | 5 | 9 | 217 | 11 | 216 | 5.51e-54 | 172 |
MS.gene006652.t1 | MTR_8g031870 | 51.266 | 158 | 77 | 0 | 12 | 169 | 5 | 162 | 1.33e-53 | 170 |
MS.gene006652.t1 | MTR_8g031680 | 40.670 | 209 | 121 | 2 | 10 | 216 | 3 | 210 | 2.17e-53 | 171 |
MS.gene006652.t1 | MTR_2g005500 | 42.654 | 211 | 110 | 2 | 6 | 215 | 2 | 202 | 1.08e-51 | 166 |
MS.gene006652.t1 | MTR_4g063160 | 42.925 | 212 | 109 | 5 | 9 | 215 | 11 | 215 | 4.96e-50 | 162 |
MS.gene006652.t1 | MTR_2g096550 | 39.631 | 217 | 116 | 4 | 4 | 215 | 6 | 212 | 1.09e-49 | 161 |
MS.gene006652.t1 | MTR_3g064390 | 39.806 | 206 | 103 | 3 | 15 | 216 | 12 | 200 | 1.97e-49 | 160 |
MS.gene006652.t1 | MTR_8g031830 | 49.673 | 153 | 77 | 0 | 12 | 164 | 5 | 157 | 2.69e-49 | 159 |
MS.gene006652.t1 | MTR_5g076590 | 38.614 | 202 | 111 | 2 | 15 | 216 | 12 | 200 | 1.32e-48 | 158 |
MS.gene006652.t1 | MTR_1g068730 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 1.96e-47 | 154 |
MS.gene006652.t1 | MTR_1g094220 | 45.399 | 163 | 88 | 1 | 15 | 176 | 33 | 195 | 2.44e-47 | 155 |
MS.gene006652.t1 | MTR_1g068740 | 56.349 | 126 | 55 | 0 | 5 | 130 | 7 | 132 | 2.62e-47 | 154 |
MS.gene006652.t1 | MTR_8g093740 | 40.455 | 220 | 114 | 5 | 1 | 215 | 1 | 208 | 5.42e-47 | 154 |
MS.gene006652.t1 | MTR_1g094220 | 45.570 | 158 | 85 | 1 | 15 | 171 | 33 | 190 | 4.59e-46 | 152 |
MS.gene006652.t1 | MTR_3g096350 | 41.981 | 212 | 106 | 5 | 9 | 215 | 8 | 207 | 2.14e-45 | 150 |
MS.gene006652.t1 | MTR_1g094220 | 46.753 | 154 | 81 | 1 | 15 | 167 | 33 | 186 | 2.51e-45 | 150 |
MS.gene006652.t1 | MTR_1g029450 | 42.932 | 191 | 95 | 4 | 9 | 197 | 13 | 191 | 2.58e-45 | 150 |
MS.gene006652.t1 | MTR_1g094220 | 43.575 | 179 | 91 | 2 | 15 | 192 | 33 | 202 | 5.37e-45 | 150 |
MS.gene006652.t1 | MTR_2g102060 | 37.931 | 203 | 110 | 3 | 15 | 216 | 12 | 199 | 8.57e-45 | 148 |
MS.gene006652.t1 | MTR_4g099470 | 42.529 | 174 | 90 | 1 | 44 | 217 | 15 | 178 | 2.16e-44 | 146 |
MS.gene006652.t1 | MTR_7g103070 | 41.315 | 213 | 108 | 4 | 10 | 216 | 13 | 214 | 2.92e-44 | 147 |
MS.gene006652.t1 | MTR_1g090717 | 46.893 | 177 | 91 | 3 | 6 | 179 | 8 | 184 | 1.23e-43 | 145 |
MS.gene006652.t1 | MTR_1g062760 | 42.453 | 212 | 104 | 6 | 10 | 215 | 11 | 210 | 4.51e-43 | 144 |
MS.gene006652.t1 | MTR_5g013900 | 34.715 | 193 | 108 | 1 | 14 | 206 | 10 | 184 | 9.05e-42 | 140 |
MS.gene006652.t1 | MTR_8g103550 | 39.645 | 169 | 101 | 1 | 15 | 182 | 11 | 179 | 1.03e-41 | 140 |
MS.gene006652.t1 | MTR_4g098950 | 33.161 | 193 | 111 | 1 | 14 | 206 | 10 | 184 | 1.19e-40 | 138 |
MS.gene006652.t1 | MTR_3g087160 | 36.306 | 157 | 100 | 0 | 14 | 170 | 10 | 166 | 6.80e-39 | 133 |
MS.gene006652.t1 | MTR_8g090215 | 32.124 | 193 | 113 | 1 | 14 | 206 | 10 | 184 | 8.30e-39 | 133 |
MS.gene006652.t1 | MTR_2g101890 | 41.071 | 168 | 91 | 4 | 13 | 173 | 10 | 176 | 1.07e-37 | 130 |
MS.gene006652.t1 | MTR_8g092020 | 41.975 | 162 | 87 | 3 | 13 | 167 | 12 | 173 | 1.56e-37 | 130 |
MS.gene006652.t1 | MTR_4g069850 | 35.238 | 210 | 115 | 7 | 13 | 214 | 8 | 204 | 1.76e-37 | 130 |
MS.gene006652.t1 | MTR_4g012940 | 40.741 | 162 | 89 | 3 | 13 | 167 | 8 | 169 | 9.40e-37 | 128 |
MS.gene006652.t1 | MTR_3g064390 | 45.600 | 125 | 68 | 0 | 15 | 139 | 12 | 136 | 1.07e-36 | 126 |
MS.gene006652.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 1.25e-36 | 125 |
MS.gene006652.t1 | MTR_1g097420 | 35.204 | 196 | 120 | 3 | 13 | 201 | 8 | 203 | 1.65e-36 | 127 |
MS.gene006652.t1 | MTR_3g096350 | 52.846 | 123 | 55 | 3 | 9 | 129 | 8 | 129 | 2.35e-36 | 125 |
MS.gene006652.t1 | MTR_6g039490 | 38.889 | 162 | 92 | 3 | 13 | 167 | 8 | 169 | 5.10e-33 | 119 |
MS.gene006652.t1 | MTR_1g069245 | 65.263 | 95 | 29 | 2 | 26 | 120 | 109 | 199 | 8.70e-33 | 118 |
MS.gene006652.t1 | MTR_8g093740 | 38.983 | 177 | 92 | 4 | 44 | 215 | 10 | 175 | 4.47e-32 | 115 |
MS.gene006652.t1 | MTR_1g097420 | 31.193 | 218 | 116 | 4 | 13 | 196 | 8 | 225 | 2.24e-30 | 112 |
MS.gene006652.t1 | MTR_7g103070 | 39.286 | 168 | 85 | 4 | 55 | 216 | 2 | 158 | 2.83e-30 | 110 |
MS.gene006652.t1 | MTR_2g078000 | 87.755 | 49 | 6 | 0 | 74 | 122 | 46 | 94 | 9.67e-26 | 96.7 |
MS.gene006652.t1 | MTR_3g107713 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.50e-24 | 96.7 |
MS.gene006652.t1 | MTR_3g107707 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.50e-24 | 96.7 |
MS.gene006652.t1 | MTR_3g107717 | 30.481 | 187 | 124 | 4 | 14 | 200 | 14 | 194 | 3.42e-24 | 95.9 |
MS.gene006652.t1 | MTR_2g005500 | 31.959 | 194 | 91 | 2 | 6 | 198 | 2 | 155 | 1.33e-22 | 90.1 |
MS.gene006652.t1 | MTR_8g031810 | 43.689 | 103 | 44 | 1 | 12 | 114 | 5 | 93 | 6.67e-22 | 86.3 |
MS.gene006652.t1 | MTR_2g078560 | 84.783 | 46 | 7 | 0 | 75 | 120 | 54 | 99 | 1.33e-20 | 88.2 |
MS.gene006652.t1 | MTR_4g088055 | 34.667 | 150 | 88 | 4 | 13 | 161 | 6 | 146 | 4.15e-20 | 84.7 |
MS.gene006652.t1 | MTR_4g073250 | 34.000 | 150 | 89 | 4 | 13 | 161 | 6 | 146 | 4.24e-20 | 84.7 |
MS.gene006652.t1 | MTR_1452s0010 | 43.038 | 79 | 45 | 0 | 33 | 111 | 1 | 79 | 5.22e-20 | 81.6 |
MS.gene006652.t1 | MTR_6g087980 | 37.500 | 128 | 77 | 3 | 13 | 139 | 6 | 131 | 9.56e-20 | 84.0 |
MS.gene006652.t1 | MTR_2g090875 | 36.567 | 134 | 82 | 3 | 13 | 145 | 6 | 137 | 2.11e-19 | 82.8 |
MS.gene006652.t1 | MTR_5g022600 | 35.606 | 132 | 82 | 3 | 13 | 143 | 6 | 135 | 4.07e-19 | 82.0 |
MS.gene006652.t1 | MTR_4g113620 | 26.425 | 193 | 127 | 5 | 14 | 206 | 14 | 191 | 4.19e-19 | 82.4 |
MS.gene006652.t1 | MTR_8g075240 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 6.72e-19 | 81.3 |
MS.gene006652.t1 | MTR_3g078260 | 28.177 | 181 | 116 | 5 | 13 | 181 | 8 | 186 | 1.18e-17 | 78.2 |
MS.gene006652.t1 | MTR_3g053480 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 1.01e-15 | 69.3 |
MS.gene006652.t1 | MTR_1g059590 | 33.140 | 172 | 105 | 5 | 10 | 181 | 428 | 589 | 1.75e-15 | 75.1 |
MS.gene006652.t1 | MTR_1g059590 | 33.140 | 172 | 105 | 5 | 10 | 181 | 395 | 556 | 1.84e-15 | 74.7 |
MS.gene006652.t1 | MTR_1686s0010 | 33.696 | 92 | 61 | 0 | 33 | 124 | 1 | 92 | 2.33e-15 | 69.3 |
MS.gene006652.t1 | MTR_3g078260 | 33.621 | 116 | 74 | 3 | 13 | 127 | 8 | 121 | 6.26e-15 | 69.7 |
MS.gene006652.t1 | MTR_8g099250 | 55.172 | 58 | 23 | 1 | 1 | 55 | 1 | 58 | 3.61e-14 | 65.5 |
MS.gene006652.t1 | MTR_5g092060 | 25.521 | 192 | 134 | 4 | 3 | 187 | 95 | 284 | 8.04e-14 | 69.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene006652.t1 | AT5G60860 | 94.444 | 216 | 12 | 0 | 1 | 216 | 1 | 216 | 3.29e-154 | 426 |
MS.gene006652.t1 | AT3G15060 | 89.862 | 217 | 22 | 0 | 1 | 217 | 1 | 217 | 7.14e-148 | 410 |
MS.gene006652.t1 | AT1G28550 | 88.532 | 218 | 24 | 1 | 1 | 217 | 1 | 218 | 2.51e-144 | 401 |
MS.gene006652.t1 | AT2G33870 | 86.175 | 217 | 29 | 1 | 1 | 216 | 1 | 217 | 8.40e-140 | 390 |
MS.gene006652.t1 | AT4G18430 | 81.567 | 217 | 40 | 0 | 1 | 217 | 1 | 217 | 5.78e-138 | 385 |
MS.gene006652.t1 | AT4G18800 | 79.263 | 217 | 40 | 2 | 1 | 216 | 1 | 213 | 4.92e-127 | 357 |
MS.gene006652.t1 | AT5G45750 | 77.880 | 217 | 45 | 2 | 1 | 216 | 1 | 215 | 7.57e-125 | 352 |
MS.gene006652.t1 | AT1G16920 | 75.115 | 217 | 51 | 2 | 1 | 216 | 1 | 215 | 9.30e-121 | 342 |
MS.gene006652.t1 | AT1G06400 | 72.811 | 217 | 56 | 2 | 1 | 216 | 1 | 215 | 1.52e-118 | 336 |
MS.gene006652.t1 | AT1G09630 | 66.359 | 217 | 69 | 2 | 3 | 217 | 2 | 216 | 3.20e-106 | 305 |
MS.gene006652.t1 | AT1G07410 | 64.186 | 215 | 73 | 2 | 3 | 216 | 2 | 213 | 7.48e-102 | 294 |
MS.gene006652.t1 | AT5G59150 | 64.679 | 218 | 70 | 3 | 3 | 216 | 2 | 216 | 1.92e-98 | 285 |
MS.gene006652.t1 | AT3G46830 | 63.303 | 218 | 73 | 3 | 4 | 217 | 3 | 217 | 5.30e-97 | 281 |
MS.gene006652.t1 | AT3G46830 | 63.303 | 218 | 73 | 3 | 4 | 217 | 3 | 217 | 5.30e-97 | 281 |
MS.gene006652.t1 | AT5G47960 | 64.455 | 211 | 66 | 3 | 11 | 215 | 13 | 220 | 2.90e-93 | 272 |
MS.gene006652.t1 | AT3G12160 | 61.244 | 209 | 75 | 2 | 11 | 215 | 13 | 219 | 9.29e-92 | 268 |
MS.gene006652.t1 | AT4G39990 | 59.524 | 210 | 81 | 3 | 11 | 217 | 15 | 223 | 9.24e-89 | 261 |
MS.gene006652.t1 | AT5G47520 | 56.757 | 222 | 90 | 3 | 1 | 217 | 1 | 221 | 6.68e-85 | 251 |
MS.gene006652.t1 | AT5G65270 | 56.604 | 212 | 87 | 1 | 11 | 217 | 15 | 226 | 1.66e-84 | 250 |
MS.gene006652.t1 | AT1G05810 | 58.019 | 212 | 80 | 3 | 11 | 217 | 10 | 217 | 9.11e-80 | 238 |
MS.gene006652.t1 | AT2G43130 | 55.556 | 216 | 87 | 3 | 6 | 216 | 2 | 213 | 1.21e-79 | 237 |
MS.gene006652.t1 | AT1G05810 | 56.757 | 222 | 85 | 4 | 3 | 217 | 46 | 263 | 1.83e-79 | 239 |
MS.gene006652.t1 | AT2G31680 | 55.502 | 209 | 91 | 1 | 11 | 217 | 10 | 218 | 3.69e-79 | 236 |
MS.gene006652.t1 | AT1G73640 | 52.444 | 225 | 91 | 4 | 7 | 215 | 7 | 231 | 2.57e-78 | 234 |
MS.gene006652.t1 | AT3G07410 | 57.005 | 207 | 88 | 1 | 11 | 216 | 10 | 216 | 4.75e-78 | 233 |
MS.gene006652.t1 | AT1G01200 | 57.075 | 212 | 86 | 3 | 11 | 217 | 26 | 237 | 2.74e-75 | 227 |
MS.gene006652.t1 | AT1G18200 | 57.459 | 181 | 77 | 0 | 1 | 181 | 1 | 181 | 6.24e-75 | 226 |
MS.gene006652.t1 | AT5G59150 | 60.241 | 166 | 59 | 3 | 55 | 216 | 3 | 165 | 2.00e-64 | 197 |
MS.gene006652.t1 | AT4G17170 | 45.933 | 209 | 111 | 1 | 10 | 216 | 3 | 211 | 2.65e-63 | 196 |
MS.gene006652.t1 | AT4G35860 | 44.019 | 209 | 115 | 1 | 10 | 216 | 3 | 211 | 9.76e-62 | 192 |
MS.gene006652.t1 | AT4G17160 | 43.689 | 206 | 112 | 1 | 10 | 215 | 3 | 204 | 7.14e-61 | 189 |
MS.gene006652.t1 | AT1G02130 | 45.498 | 211 | 104 | 2 | 7 | 216 | 2 | 202 | 3.40e-58 | 182 |
MS.gene006652.t1 | AT4G17530 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 3.03e-57 | 180 |
MS.gene006652.t1 | AT5G47200 | 44.076 | 211 | 108 | 1 | 7 | 217 | 2 | 202 | 4.74e-57 | 179 |
MS.gene006652.t1 | AT5G03520 | 45.833 | 216 | 105 | 4 | 5 | 216 | 7 | 214 | 1.55e-55 | 176 |
MS.gene006652.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene006652.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene006652.t1 | AT3G46060 | 45.755 | 212 | 102 | 5 | 9 | 215 | 11 | 214 | 1.90e-54 | 173 |
MS.gene006652.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene006652.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene006652.t1 | AT3G53610 | 43.868 | 212 | 106 | 3 | 9 | 215 | 11 | 214 | 4.74e-54 | 172 |
MS.gene006652.t1 | AT5G59840 | 43.925 | 214 | 107 | 4 | 9 | 217 | 11 | 216 | 8.90e-54 | 172 |
MS.gene006652.t1 | AT3G11730 | 46.286 | 175 | 94 | 0 | 8 | 182 | 3 | 177 | 8.76e-53 | 169 |
MS.gene006652.t1 | AT3G09900 | 43.981 | 216 | 111 | 3 | 5 | 216 | 7 | 216 | 1.81e-52 | 168 |
MS.gene006652.t1 | AT5G45130 | 41.089 | 202 | 106 | 3 | 15 | 216 | 12 | 200 | 2.09e-51 | 165 |
MS.gene006652.t1 | AT5G45130 | 41.000 | 200 | 105 | 3 | 17 | 216 | 22 | 208 | 3.06e-50 | 162 |
MS.gene006652.t1 | AT4G19640 | 45.399 | 163 | 89 | 0 | 15 | 177 | 12 | 174 | 9.77e-50 | 161 |
MS.gene006652.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene006652.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene006652.t1 | AT1G43890 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 8.18e-49 | 159 |
MS.gene006652.t1 | AT3G54840 | 46.626 | 163 | 86 | 1 | 15 | 176 | 35 | 197 | 8.04e-48 | 156 |
MS.gene006652.t1 | AT3G54840 | 46.296 | 162 | 86 | 1 | 16 | 176 | 2 | 163 | 2.25e-47 | 154 |
MS.gene006652.t1 | AT3G54840 | 48.052 | 154 | 79 | 1 | 15 | 167 | 35 | 188 | 2.80e-46 | 152 |
MS.gene006652.t1 | AT5G03530 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 4.66e-46 | 152 |
MS.gene006652.t1 | AT5G03530 | 46.961 | 181 | 93 | 3 | 1 | 179 | 1 | 180 | 4.66e-46 | 152 |
MS.gene006652.t1 | AT4G35860 | 40.244 | 164 | 96 | 1 | 55 | 216 | 2 | 165 | 6.12e-43 | 142 |
MS.gene006652.t1 | AT1G22740 | 42.593 | 162 | 86 | 3 | 13 | 167 | 8 | 169 | 3.83e-40 | 136 |
MS.gene006652.t1 | AT2G44610 | 33.679 | 193 | 110 | 1 | 14 | 206 | 10 | 184 | 4.76e-40 | 136 |
MS.gene006652.t1 | AT5G03520 | 42.197 | 173 | 88 | 4 | 48 | 216 | 40 | 204 | 3.28e-39 | 134 |
MS.gene006652.t1 | AT1G52280 | 42.262 | 168 | 89 | 4 | 13 | 173 | 8 | 174 | 4.53e-39 | 134 |
MS.gene006652.t1 | AT4G19640 | 45.802 | 131 | 71 | 0 | 15 | 145 | 12 | 142 | 5.88e-39 | 133 |
MS.gene006652.t1 | AT2G22290 | 35.669 | 157 | 101 | 0 | 14 | 170 | 10 | 166 | 7.16e-39 | 133 |
MS.gene006652.t1 | AT4G39890 | 37.342 | 158 | 98 | 1 | 14 | 170 | 10 | 167 | 8.22e-39 | 133 |
MS.gene006652.t1 | AT3G09910 | 42.857 | 196 | 101 | 5 | 1 | 194 | 1 | 187 | 1.66e-38 | 132 |
MS.gene006652.t1 | AT3G09910 | 42.857 | 196 | 101 | 5 | 1 | 194 | 1 | 187 | 1.66e-38 | 132 |
MS.gene006652.t1 | AT4G19640 | 46.400 | 125 | 67 | 0 | 15 | 139 | 12 | 136 | 2.04e-38 | 130 |
MS.gene006652.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene006652.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene006652.t1 | AT3G09910 | 39.726 | 219 | 116 | 6 | 1 | 217 | 1 | 205 | 4.38e-38 | 131 |
MS.gene006652.t1 | AT5G10260 | 32.124 | 193 | 113 | 1 | 14 | 206 | 10 | 184 | 1.55e-37 | 130 |
MS.gene006652.t1 | AT3G18820 | 36.190 | 210 | 113 | 7 | 13 | 214 | 8 | 204 | 1.73e-37 | 130 |
MS.gene006652.t1 | AT3G16100 | 40.741 | 162 | 89 | 3 | 13 | 167 | 8 | 169 | 1.40e-36 | 127 |
MS.gene006652.t1 | AT2G21880 | 40.000 | 165 | 92 | 3 | 13 | 170 | 9 | 173 | 2.29e-36 | 127 |
MS.gene006652.t1 | AT5G64990 | 34.783 | 161 | 105 | 0 | 14 | 174 | 8 | 168 | 2.64e-36 | 127 |
MS.gene006652.t1 | AT4G09720 | 38.788 | 165 | 94 | 2 | 13 | 170 | 8 | 172 | 4.47e-36 | 126 |
MS.gene006652.t1 | AT5G46025 | 57.547 | 106 | 44 | 1 | 75 | 179 | 6 | 111 | 5.78e-36 | 123 |
MS.gene006652.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 1.83e-35 | 124 |
MS.gene006652.t1 | AT1G49300 | 33.971 | 209 | 119 | 5 | 13 | 214 | 8 | 204 | 1.83e-35 | 124 |
MS.gene006652.t1 | AT4G09720 | 37.059 | 170 | 95 | 2 | 13 | 170 | 8 | 177 | 1.28e-34 | 122 |
MS.gene006652.t1 | AT5G64990 | 33.333 | 168 | 105 | 1 | 14 | 174 | 8 | 175 | 1.53e-33 | 120 |
MS.gene006652.t1 | AT4G09720 | 35.795 | 176 | 95 | 2 | 13 | 170 | 8 | 183 | 1.73e-33 | 120 |
MS.gene006652.t1 | AT5G39620 | 37.195 | 164 | 96 | 3 | 14 | 170 | 6 | 169 | 9.19e-32 | 115 |
MS.gene006652.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 3.25e-27 | 102 |
MS.gene006652.t1 | AT2G21880 | 37.162 | 148 | 86 | 3 | 30 | 170 | 1 | 148 | 3.25e-27 | 102 |
MS.gene006652.t1 | AT2G21880 | 35.152 | 165 | 92 | 4 | 13 | 170 | 9 | 165 | 1.79e-26 | 101 |
MS.gene006652.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene006652.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene006652.t1 | AT4G09720 | 36.957 | 138 | 80 | 2 | 40 | 170 | 1 | 138 | 1.24e-24 | 95.9 |
MS.gene006652.t1 | AT5G55190 | 29.744 | 195 | 131 | 4 | 14 | 208 | 14 | 202 | 1.71e-24 | 96.7 |
MS.gene006652.t1 | AT5G20020 | 29.474 | 190 | 128 | 4 | 14 | 203 | 14 | 197 | 1.75e-24 | 96.7 |
MS.gene006652.t1 | AT5G20010 | 30.000 | 190 | 127 | 4 | 14 | 203 | 14 | 197 | 1.81e-24 | 96.7 |
MS.gene006652.t1 | AT5G55080 | 31.818 | 154 | 102 | 3 | 14 | 167 | 14 | 164 | 4.67e-24 | 95.5 |
MS.gene006652.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene006652.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene006652.t1 | AT4G35020 | 36.667 | 150 | 85 | 4 | 13 | 161 | 6 | 146 | 5.73e-22 | 89.7 |
MS.gene006652.t1 | AT2G44690 | 31.667 | 180 | 109 | 5 | 13 | 180 | 18 | 195 | 1.80e-20 | 85.9 |
MS.gene006652.t1 | AT4G28950 | 38.333 | 120 | 71 | 3 | 13 | 131 | 6 | 123 | 1.47e-19 | 83.6 |
MS.gene006652.t1 | AT1G75840 | 34.000 | 150 | 89 | 4 | 13 | 161 | 6 | 146 | 1.63e-19 | 83.2 |
MS.gene006652.t1 | AT1G20090 | 33.333 | 150 | 90 | 4 | 13 | 161 | 5 | 145 | 3.09e-19 | 82.4 |
MS.gene006652.t1 | AT5G45970 | 38.333 | 120 | 71 | 3 | 13 | 131 | 6 | 123 | 7.96e-19 | 81.3 |
MS.gene006652.t1 | AT4G08190 | 53.521 | 71 | 30 | 1 | 97 | 167 | 60 | 127 | 9.69e-19 | 79.3 |
MS.gene006652.t1 | AT2G17800 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 1.43e-18 | 80.5 |
MS.gene006652.t1 | AT2G17800 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 1.43e-18 | 80.5 |
MS.gene006652.t1 | AT3G51300 | 33.784 | 148 | 88 | 4 | 15 | 161 | 8 | 146 | 1.45e-18 | 80.5 |
MS.gene006652.t1 | AT4G35950 | 33.333 | 150 | 90 | 4 | 13 | 161 | 6 | 146 | 3.62e-18 | 79.3 |
MS.gene006652.t1 | AT3G48040 | 31.138 | 167 | 101 | 5 | 13 | 167 | 8 | 172 | 7.95e-18 | 79.0 |
MS.gene006652.t1 | AT3G48040 | 34.615 | 130 | 82 | 3 | 13 | 141 | 8 | 135 | 2.38e-17 | 77.0 |
MS.gene006652.t1 | AT5G62880 | 28.977 | 176 | 111 | 5 | 13 | 176 | 8 | 181 | 3.40e-17 | 77.4 |
MS.gene006652.t1 | AT4G35020 | 36.885 | 122 | 74 | 3 | 15 | 135 | 8 | 127 | 3.57e-17 | 75.5 |
MS.gene006652.t1 | AT4G35020 | 36.885 | 122 | 74 | 3 | 15 | 135 | 8 | 127 | 3.57e-17 | 75.5 |
MS.gene006652.t1 | AT5G62880 | 35.000 | 120 | 75 | 3 | 13 | 131 | 8 | 125 | 9.75e-17 | 75.5 |
MS.gene006652.t1 | AT3G21700 | 24.859 | 177 | 125 | 4 | 5 | 175 | 99 | 273 | 4.90e-11 | 61.2 |
Find 41 sgRNAs with CRISPR-Local
Find 151 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGATTGTAAAGGCGCAAATT+TGG | 0.263893 | 4.1:-26746582 | MS.gene006652:CDS |
CTCTTCAAGGTTGTTCTTAT+CGG | 0.265240 | 4.1:-26746724 | MS.gene006652:CDS |
AAATGTGGAGAGATGGTTAA+AGG | 0.339786 | 4.1:-26744941 | MS.gene006652:CDS |
GATTGTAAAGGCGCAAATTT+GGG | 0.346753 | 4.1:-26746581 | MS.gene006652:CDS |
ACATTGATTGTCTGCCCTTT+CGG | 0.347019 | 4.1:+26744670 | None:intergenic |
AAGTGCTTACTCAAATATAT+CGG | 0.355067 | 4.1:-26744741 | MS.gene006652:CDS |
TGATGTCTCAGCTGTTAAAA+AGG | 0.356391 | 4.1:-26744635 | MS.gene006652:CDS |
TGCCCTTTCGGCAAAGCAGC+AGG | 0.357959 | 4.1:+26744682 | None:intergenic |
AACATTGTAATTATGCTTGT+AGG | 0.389104 | 4.1:-26744895 | MS.gene006652:CDS |
TGACTACGATTATCTCTTCA+AGG | 0.407767 | 4.1:-26746737 | MS.gene006652:CDS |
TGTGAAACGTGATAAGAGAT+TGG | 0.428162 | 4.1:+26746681 | None:intergenic |
AGTAGGAAGACTCTTGAGAT+TGG | 0.447739 | 4.1:-26744712 | MS.gene006652:CDS |
ACCCTGCTGCTTTGCCGAAA+GGG | 0.452369 | 4.1:-26744684 | MS.gene006652:CDS |
AAATATATCGGGTCGTTAGT+AGG | 0.469802 | 4.1:-26744729 | MS.gene006652:CDS |
GACCCTGCTGCTTTGCCGAA+AGG | 0.495154 | 4.1:-26744685 | MS.gene006652:CDS |
ACATTGTAATTATGCTTGTA+GGG | 0.495874 | 4.1:-26744894 | MS.gene006652:CDS |
GGGATACCGCTGGCCAAGAA+AGG | 0.500181 | 4.1:-26746561 | MS.gene006652:intron |
TGTCAACATTCAATGATTCA+AGG | 0.510469 | 4.1:+26744776 | None:intergenic |
GTCAACATTCAATGATTCAA+GGG | 0.527360 | 4.1:+26744777 | None:intergenic |
TACAAGCATAATTACAATGT+TGG | 0.532166 | 4.1:+26744897 | None:intergenic |
AGTGCTTACTCAAATATATC+GGG | 0.535722 | 4.1:-26744740 | MS.gene006652:CDS |
TTGGAATCTAAATCCACCAT+TGG | 0.540764 | 4.1:-26746643 | MS.gene006652:CDS |
GTTGTTCTTATCGGTGACTC+CGG | 0.557067 | 4.1:-26746715 | MS.gene006652:CDS |
GCATATTACCGAGGAGCTGT+TGG | 0.560112 | 4.1:-26745006 | MS.gene006652:CDS |
CTTATCGGTGACTCCGGCGT+CGG | 0.565545 | 4.1:-26746709 | MS.gene006652:CDS |
TGTTGATGATAAGATTGTAA+AGG | 0.565954 | 4.1:-26746593 | MS.gene006652:CDS |
GAGATAATCGTAGTCATCAT+CGG | 0.580615 | 4.1:+26746744 | None:intergenic |
AATTATGCTTGTAGGGAACA+AGG | 0.586038 | 4.1:-26744887 | MS.gene006652:CDS |
GCGCAAATTTGGGATACCGC+TGG | 0.594608 | 4.1:-26746571 | MS.gene006652:CDS |
AAAGGGCAGACAATCAATGT+TGG | 0.598448 | 4.1:-26744667 | MS.gene006652:CDS |
AGCGAATTCAACACCAATGG+TGG | 0.599801 | 4.1:+26746630 | None:intergenic |
GAGATTGGATTTACCGACGC+CGG | 0.606160 | 4.1:+26746696 | None:intergenic |
GCCCTTTCGGCAAAGCAGCA+GGG | 0.609170 | 4.1:+26744683 | None:intergenic |
TTTAGCATCATCTGTGGACA+CGG | 0.622264 | 4.1:+26744843 | None:intergenic |
ATGTAACCTTTCTTGGCCAG+CGG | 0.634062 | 4.1:+26746555 | None:intergenic |
GCAATGCACCAACAGCTCCT+CGG | 0.640378 | 4.1:+26744998 | None:intergenic |
TTGGTGTTGAATTCGCTACA+CGG | 0.653013 | 4.1:-26746624 | MS.gene006652:CDS |
TGTAGCGAATTCAACACCAA+TGG | 0.659620 | 4.1:+26746627 | None:intergenic |
AAATGCTTTAGCATCATCTG+TGG | 0.691636 | 4.1:+26744837 | None:intergenic |
ATCACAAGTGCATATTACCG+AGG | 0.696878 | 4.1:-26745015 | MS.gene006652:CDS |
TTACAATGTTGGCATCTGTG+TGG | 0.772558 | 4.1:+26744908 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TAAATTATGCTATATATTTA+TGG | - | chr4.1:26745170-26745189 | MS.gene006652:intron | 10.0% |
!!! | TTTTCTTTTTGTTATAAAAT+AGG | + | chr4.1:26745549-26745568 | None:intergenic | 10.0% |
!!! | AATTTTGATGATACTTTTAA+TGG | - | chr4.1:26746172-26746191 | MS.gene006652:intron | 15.0% |
!! | ATTAGAAAAAATGCAAACAT+AGG | - | chr4.1:26745112-26745131 | MS.gene006652:intron | 20.0% |
!! | TCCAATATAAAAACCTAAAA+TGG | + | chr4.1:26745446-26745465 | None:intergenic | 20.0% |
!! | TGAAAAATTGAGATTTGATT+TGG | - | chr4.1:26744967-26744986 | MS.gene006652:CDS | 20.0% |
!!! | ACCATTTTAGGTTTTTATAT+TGG | - | chr4.1:26745442-26745461 | MS.gene006652:intron | 20.0% |
!!! | ATTATTTTTTGGGATTTTTG+TGG | - | chr4.1:26744892-26744911 | MS.gene006652:CDS | 20.0% |
! | AAAATAGGTATCCTTTGAAT+TGG | + | chr4.1:26745534-26745553 | None:intergenic | 25.0% |
! | AAAGAAAAGGAAAGGTTAAT+TGG | + | chr4.1:26745819-26745838 | None:intergenic | 25.0% |
! | AAATAGGTATCCTTTGAATT+GGG | + | chr4.1:26745533-26745552 | None:intergenic | 25.0% |
! | AACATTGTAATTATGCTTGT+AGG | - | chr4.1:26746480-26746499 | MS.gene006652:intron | 25.0% |
! | AAGTGCTTACTCAAATATAT+CGG | - | chr4.1:26746634-26746653 | MS.gene006652:CDS | 25.0% |
! | ACATTGTAATTATGCTTGTA+GGG | - | chr4.1:26746481-26746500 | MS.gene006652:intron | 25.0% |
! | ATATTGCTTAGAGAAAGAAA+AGG | + | chr4.1:26745832-26745851 | None:intergenic | 25.0% |
! | ATGTTTATTGAGAAATCATG+TGG | + | chr4.1:26745907-26745926 | None:intergenic | 25.0% |
! | ATTATTTCACAATTCACACA+AGG | + | chr4.1:26745738-26745757 | None:intergenic | 25.0% |
! | GATAAAAATGTAACCTTTCT+TGG | + | chr4.1:26744830-26744849 | None:intergenic | 25.0% |
! | TACAAGCATAATTACAATGT+TGG | + | chr4.1:26746481-26746500 | None:intergenic | 25.0% |
! | TTGATCTCAAAATTCATTGA+AGG | - | chr4.1:26746208-26746227 | MS.gene006652:intron | 25.0% |
!! | ATAGGCTATAATACCATTTT+AGG | - | chr4.1:26745430-26745449 | MS.gene006652:intron | 25.0% |
!! | ATTTGATGACTTCTGTAAAA+TGG | - | chr4.1:26745575-26745594 | MS.gene006652:intron | 25.0% |
!! | CACAAAGTATTTGGTATATT+GGG | - | chr4.1:26745282-26745301 | MS.gene006652:intron | 25.0% |
!!! | AAGAGAGAACACATTTTTTA+TGG | - | chr4.1:26746566-26746585 | MS.gene006652:CDS | 25.0% |
!!! | ACATGTAACTTTTGAAAATG+TGG | - | chr4.1:26746419-26746438 | MS.gene006652:intron | 25.0% |
!!! | AGATATCACTTTTATGACTT+AGG | + | chr4.1:26746018-26746037 | None:intergenic | 25.0% |
!!! | GGGTTTGGTTAAATTTTAAT+GGG | - | chr4.1:26744929-26744948 | MS.gene006652:CDS | 25.0% |
!!! | TGTTGATGATAAGATTGTAA+AGG | - | chr4.1:26744782-26744801 | MS.gene006652:CDS | 25.0% |
!!! | TTTGATCGCATTTCTTTTTT+TGG | - | chr4.1:26744855-26744874 | MS.gene006652:CDS | 25.0% |
AAGTCATAAAAGTGACATCA+TGG | - | chr4.1:26746049-26746068 | MS.gene006652:intron | 30.0% | |
AGTGCTTACTCAAATATATC+GGG | - | chr4.1:26746635-26746654 | MS.gene006652:CDS | 30.0% | |
ATGTGGAAGAAAAAAACATG+AGG | + | chr4.1:26745771-26745790 | None:intergenic | 30.0% | |
CAAAGTGATATTGTATCATC+GGG | + | chr4.1:26745969-26745988 | None:intergenic | 30.0% | |
CACAAAAAACGAATTCAGTT+TGG | - | chr4.1:26744713-26744732 | MS.gene006652:CDS | 30.0% | |
CATCCTTACAAACTCTAATT+TGG | - | chr4.1:26745473-26745492 | MS.gene006652:intron | 30.0% | |
CCAAAGTGATATTGTATCAT+CGG | + | chr4.1:26745970-26745989 | None:intergenic | 30.0% | |
GTCAACATTCAATGATTCAA+GGG | + | chr4.1:26746601-26746620 | None:intergenic | 30.0% | |
TCATAAACGTGACATCAATT+TGG | - | chr4.1:26745990-26746009 | MS.gene006652:intron | 30.0% | |
TGTCAACATTCAATGATTCA+AGG | + | chr4.1:26746602-26746621 | None:intergenic | 30.0% | |
TGTGGAAGAAAAAAACATGA+GGG | + | chr4.1:26745770-26745789 | None:intergenic | 30.0% | |
! | AACGATAGGCTTTGATAATT+GGG | - | chr4.1:26745354-26745373 | MS.gene006652:intron | 30.0% |
! | GATGATACTTTTAATGGTTG+AGG | - | chr4.1:26746178-26746197 | MS.gene006652:intron | 30.0% |
! | GCACAAAGTATTTGGTATAT+TGG | - | chr4.1:26745281-26745300 | MS.gene006652:intron | 30.0% |
! | TATGCCATTCACATTTTTCT+GGG | - | chr4.1:26745137-26745156 | MS.gene006652:intron | 30.0% |
! | TTATGCCATTCACATTTTTC+TGG | - | chr4.1:26745136-26745155 | MS.gene006652:intron | 30.0% |
!! | GGGGTTTGGTTAAATTTTAA+TGG | - | chr4.1:26744928-26744947 | MS.gene006652:CDS | 30.0% |
!! | TATCTGGATGATTTTGACAT+TGG | - | chr4.1:26745062-26745081 | MS.gene006652:intron | 30.0% |
!!! | ATGATGTCACTTTTATGACT+TGG | + | chr4.1:26746050-26746069 | None:intergenic | 30.0% |
!!! | TGATGTCACTTTTATGACTT+GGG | + | chr4.1:26746049-26746068 | None:intergenic | 30.0% |
AAATATATCGGGTCGTTAGT+AGG | - | chr4.1:26746646-26746665 | MS.gene006652:CDS | 35.0% | |
AAATGCTTTAGCATCATCTG+TGG | + | chr4.1:26746541-26746560 | None:intergenic | 35.0% | |
AAATGTGGAGAGATGGTTAA+AGG | - | chr4.1:26746434-26746453 | MS.gene006652:intron | 35.0% | |
AATTATGCTTGTAGGGAACA+AGG | - | chr4.1:26746488-26746507 | MS.gene006652:intron | 35.0% | |
ACAACTCATTCGTACAAAAC+CGG | - | chr4.1:26745378-26745397 | MS.gene006652:intron | 35.0% | |
AGAGTTTGTAAGGATGAGTT+AGG | + | chr4.1:26745469-26745488 | None:intergenic | 35.0% | |
AGGCCAAATTAGAGTTTGTA+AGG | + | chr4.1:26745479-26745498 | None:intergenic | 35.0% | |
CCGATGATACAATATCACTT+TGG | - | chr4.1:26745967-26745986 | MS.gene006652:intron | 35.0% | |
CTCTTCAAGGTTGTTCTTAT+CGG | - | chr4.1:26744651-26744670 | MS.gene006652:CDS | 35.0% | |
GACTTCTGTAAAATGGTGAA+TGG | - | chr4.1:26745582-26745601 | MS.gene006652:intron | 35.0% | |
GAGATAATCGTAGTCATCAT+CGG | + | chr4.1:26744634-26744653 | None:intergenic | 35.0% | |
GCTTAGAGAAAGAAAAGGAA+AGG | + | chr4.1:26745827-26745846 | None:intergenic | 35.0% | |
GTTGCAAAAACAAACGAATG+TGG | + | chr4.1:26745788-26745807 | None:intergenic | 35.0% | |
TAGTCCATCAATCTGTACAA+AGG | - | chr4.1:26746147-26746166 | MS.gene006652:intron | 35.0% | |
TGACTACGATTATCTCTTCA+AGG | - | chr4.1:26744638-26744657 | MS.gene006652:CDS | 35.0% | |
TGATGTCTCAGCTGTTAAAA+AGG | - | chr4.1:26746740-26746759 | MS.gene006652:CDS | 35.0% | |
TGTCAACTTTGCATGATTGA+AGG | + | chr4.1:26746121-26746140 | None:intergenic | 35.0% | |
TGTGAAACGTGATAAGAGAT+TGG | + | chr4.1:26744697-26744716 | None:intergenic | 35.0% | |
TTGGAATCTAAATCCACCAT+TGG | - | chr4.1:26744732-26744751 | MS.gene006652:CDS | 35.0% | |
TTGGGTTTATCCCAATTCAA+AGG | - | chr4.1:26745520-26745539 | MS.gene006652:intron | 35.0% | |
TTGTCCCAGAAAAATGTGAA+TGG | + | chr4.1:26745144-26745163 | None:intergenic | 35.0% | |
TTGTCCTTTGTACAGATTGA+TGG | + | chr4.1:26746154-26746173 | None:intergenic | 35.0% | |
! | AGATTGTAAAGGCGCAAATT+TGG | - | chr4.1:26744793-26744812 | MS.gene006652:CDS | 35.0% |
! | GAAATGTCTGTTGTTGTTGT+GGG | - | chr4.1:26745028-26745047 | MS.gene006652:CDS | 35.0% |
! | GAACGATAGGCTTTGATAAT+TGG | - | chr4.1:26745353-26745372 | MS.gene006652:intron | 35.0% |
! | GATTGTAAAGGCGCAAATTT+GGG | - | chr4.1:26744794-26744813 | MS.gene006652:CDS | 35.0% |
! | GCCTTATCTTTTATCAATGC+GGG | - | chr4.1:26745495-26745514 | MS.gene006652:intron | 35.0% |
! | TCCCGCATTGATAAAAGATA+AGG | + | chr4.1:26745499-26745518 | None:intergenic | 35.0% |
! | TGAAATGTCTGTTGTTGTTG+TGG | - | chr4.1:26745027-26745046 | MS.gene006652:CDS | 35.0% |
! | TTGAAAGCTTTATGTTGCCA+TGG | - | chr4.1:26745606-26745625 | MS.gene006652:intron | 35.0% |
! | TTTTGTGGAGCGAATTTTAG+TGG | - | chr4.1:26744907-26744926 | MS.gene006652:CDS | 35.0% |
!! | CTTTTGAAAATGTGGAGAGA+TGG | - | chr4.1:26746427-26746446 | MS.gene006652:intron | 35.0% |
!! | GGCCTTATCTTTTATCAATG+CGG | - | chr4.1:26745494-26745513 | MS.gene006652:intron | 35.0% |
!! | TTTGTGGAGCGAATTTTAGT+GGG | - | chr4.1:26744908-26744927 | MS.gene006652:CDS | 35.0% |
!!! | GTGGGATTCTTGTTTTTATC+TGG | - | chr4.1:26745046-26745065 | MS.gene006652:intron | 35.0% |
AAAACCGGATTGTAAGGTGA+GGG | - | chr4.1:26745321-26745340 | MS.gene006652:intron | 40.0% | |
AAAGGGCAGACAATCAATGT+TGG | - | chr4.1:26746708-26746727 | MS.gene006652:CDS | 40.0% | |
ACAACTCGTTCGTACAAAAC+CGG | - | chr4.1:26745306-26745325 | MS.gene006652:intron | 40.0% | |
ACATCATGGTCCTCCAAAAA+AGG | - | chr4.1:26746063-26746082 | MS.gene006652:intron | 40.0% | |
AGGCTCAAAAGTCAAAACCA+TGG | + | chr4.1:26745626-26745645 | None:intergenic | 40.0% | |
AGTAGGAAGACTCTTGAGAT+TGG | - | chr4.1:26746663-26746682 | MS.gene006652:CDS | 40.0% | |
ATCACAAGTGCATATTACCG+AGG | - | chr4.1:26746360-26746379 | MS.gene006652:intron | 40.0% | |
CAATTCTGTCGTGTAGATGA+AGG | - | chr4.1:26745698-26745717 | MS.gene006652:intron | 40.0% | |
GTATCATCGGGTACGTAAAT+GGG | + | chr4.1:26745957-26745976 | None:intergenic | 40.0% | |
GTCGTGTAGATGAAGGTTTA+GGG | - | chr4.1:26745705-26745724 | MS.gene006652:intron | 40.0% | |
GTCTCAGCTGTTAAAAAGGT+TGG | - | chr4.1:26746744-26746763 | MS.gene006652:CDS | 40.0% | |
TCGTACAAAACCGGATTGTA+AGG | - | chr4.1:26745315-26745334 | MS.gene006652:intron | 40.0% | |
TGTAGCGAATTCAACACCAA+TGG | + | chr4.1:26744751-26744770 | None:intergenic | 40.0% | |
TGTATCATCGGGTACGTAAA+TGG | + | chr4.1:26745958-26745977 | None:intergenic | 40.0% | |
TGTCGTGTAGATGAAGGTTT+AGG | - | chr4.1:26745704-26745723 | MS.gene006652:intron | 40.0% | |
TTACAATGTTGGCATCTGTG+TGG | + | chr4.1:26746470-26746489 | None:intergenic | 40.0% | |
TTTAGCATCATCTGTGGACA+CGG | + | chr4.1:26746535-26746554 | None:intergenic | 40.0% | |
! | ACATTGATTGTCTGCCCTTT+CGG | + | chr4.1:26746708-26746727 | None:intergenic | 40.0% |
! | CTTTTATCAATGCGGGACTT+GGG | - | chr4.1:26745502-26745521 | MS.gene006652:intron | 40.0% |
! | TCTTTTATCAATGCGGGACT+TGG | - | chr4.1:26745501-26745520 | MS.gene006652:intron | 40.0% |
!! | TTGGTGATGATGAATGACGT+AGG | - | chr4.1:26744986-26745005 | MS.gene006652:CDS | 40.0% |
!! | TTGGTGTTGAATTCGCTACA+CGG | - | chr4.1:26744751-26744770 | MS.gene006652:CDS | 40.0% |
!! | TTGTGGAGCGAATTTTAGTG+GGG | - | chr4.1:26744909-26744928 | MS.gene006652:CDS | 40.0% |
!!! | CTACCTAATGCCACCTTTTT+TGG | + | chr4.1:26746079-26746098 | None:intergenic | 40.0% |
!!! | TGGTTTTGACTTTTGAGCCT+TGG | - | chr4.1:26745626-26745645 | MS.gene006652:intron | 40.0% |
AAACCGGATTGTAAGGTGAG+GGG | - | chr4.1:26745322-26745341 | MS.gene006652:intron | 45.0% | |
AGCGAATTCAACACCAATGG+TGG | + | chr4.1:26744748-26744767 | None:intergenic | 45.0% | |
ATGTAACCTTTCTTGGCCAG+CGG | + | chr4.1:26744823-26744842 | None:intergenic | 45.0% | |
CAAAACCGGATTGTAAGGTG+AGG | - | chr4.1:26745320-26745339 | MS.gene006652:intron | 45.0% | |
CACAATTACCTGAGTGCACT+TGG | - | chr4.1:26745222-26745241 | MS.gene006652:intron | 45.0% | |
CCAAATACTTTGTGCGCAAC+TGG | + | chr4.1:26745276-26745295 | None:intergenic | 45.0% | |
CCTCCAAAAAAGGTGGCATT+AGG | - | chr4.1:26746073-26746092 | MS.gene006652:intron | 45.0% | |
GCACTTGGATGAGATGGTTT+AGG | - | chr4.1:26745237-26745256 | MS.gene006652:intron | 45.0% | |
GTTGTTCTTATCGGTGACTC+CGG | - | chr4.1:26744660-26744679 | MS.gene006652:CDS | 45.0% | |
TCATGGTCCTCCAAAAAAGG+TGG | - | chr4.1:26746066-26746085 | MS.gene006652:intron | 45.0% | |
! | CCAGTTGCGCACAAAGTATT+TGG | - | chr4.1:26745273-26745292 | MS.gene006652:intron | 45.0% |
! | CCATCTACCCAGACGATTTT+GGG | + | chr4.1:26745861-26745880 | None:intergenic | 45.0% |
! | GACTTTTGAGCCTTGGTAGA+TGG | - | chr4.1:26745633-26745652 | MS.gene006652:intron | 45.0% |
!! | AGCCTTGGTAGATGGTTTTG+TGG | - | chr4.1:26745641-26745660 | MS.gene006652:intron | 45.0% |
!! | GAGCGAATTTTAGTGGGGTT+TGG | - | chr4.1:26744914-26744933 | MS.gene006652:CDS | 45.0% |
!!! | CCTAATGCCACCTTTTTTGG+AGG | + | chr4.1:26746076-26746095 | None:intergenic | 45.0% |
!!! | CCTTGGTAGATGGTTTTGTG+GGG | - | chr4.1:26745643-26745662 | MS.gene006652:intron | 45.0% |
!!! | GCCTTGGTAGATGGTTTTGT+GGG | - | chr4.1:26745642-26745661 | MS.gene006652:intron | 45.0% |
!!! | TGATTTTTTTATTATTTTTT+GGG | - | chr4.1:26744882-26744901 | MS.gene006652:CDS | 5.0% |
!!! | TTGATTTTTTTATTATTTTT+TGG | - | chr4.1:26744881-26744900 | MS.gene006652:CDS | 5.0% |
AACCGGATTGTAAGGTGAGG+GGG | - | chr4.1:26745323-26745342 | MS.gene006652:intron | 50.0% | |
ATGCTGCTCCCAAAATCGTC+TGG | - | chr4.1:26745850-26745869 | MS.gene006652:intron | 50.0% | |
CATCTCATCCAAGTGCACTC+AGG | + | chr4.1:26745233-26745252 | None:intergenic | 50.0% | |
CCCAAAATCGTCTGGGTAGA+TGG | - | chr4.1:26745858-26745877 | MS.gene006652:intron | 50.0% | |
CCCCACAAAACCATCTACCA+AGG | + | chr4.1:26745646-26745665 | None:intergenic | 50.0% | |
CTGAGTGCACTTGGATGAGA+TGG | - | chr4.1:26745231-26745250 | MS.gene006652:intron | 50.0% | |
GAGATTGGATTTACCGACGC+CGG | + | chr4.1:26744682-26744701 | None:intergenic | 50.0% | |
GCATATTACCGAGGAGCTGT+TGG | - | chr4.1:26746369-26746388 | MS.gene006652:intron | 50.0% | |
TGCTGCTCCCAAAATCGTCT+GGG | - | chr4.1:26745851-26745870 | MS.gene006652:intron | 50.0% | |
! | GCCATCTACCCAGACGATTT+TGG | + | chr4.1:26745862-26745881 | None:intergenic | 50.0% |
!!! | GTAGATGGTTTTGTGGGGAG+TGG | - | chr4.1:26745648-26745667 | MS.gene006652:intron | 50.0% |
CACCCCCTCACCTTACAATC+CGG | + | chr4.1:26745328-26745347 | None:intergenic | 55.0% | |
GCAATGCACCAACAGCTCCT+CGG | + | chr4.1:26746380-26746399 | None:intergenic | 55.0% | |
TGTAAGGTGAGGGGGTGACT+CGG | - | chr4.1:26745331-26745350 | MS.gene006652:intron | 55.0% | |
! | GCGCAAATTTGGGATACCGC+TGG | - | chr4.1:26744804-26744823 | MS.gene006652:CDS | 55.0% |
!! | ACCCTGCTGCTTTGCCGAAA+GGG | - | chr4.1:26746691-26746710 | MS.gene006652:CDS | 55.0% |
CTTATCGGTGACTCCGGCGT+CGG | - | chr4.1:26744666-26744685 | MS.gene006652:CDS | 60.0% | |
GCCCTTTCGGCAAAGCAGCA+GGG | + | chr4.1:26746695-26746714 | None:intergenic | 60.0% | |
GGGATACCGCTGGCCAAGAA+AGG | - | chr4.1:26744814-26744833 | MS.gene006652:CDS | 60.0% | |
TGCCCTTTCGGCAAAGCAGC+AGG | + | chr4.1:26746696-26746715 | None:intergenic | 60.0% | |
! | AGGGGGTGACTCGGAACGAT+AGG | - | chr4.1:26745340-26745359 | MS.gene006652:intron | 60.0% |
!! | GACCCTGCTGCTTTGCCGAA+AGG | - | chr4.1:26746690-26746709 | MS.gene006652:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.1 | gene | 26744615 | 26746782 | 26744615 | ID=MS.gene006652 |
chr4.1 | mRNA | 26744615 | 26746782 | 26744615 | ID=MS.gene006652.t1;Parent=MS.gene006652 |
chr4.1 | exon | 26746562 | 26746782 | 26746562 | ID=MS.gene006652.t1.exon1;Parent=MS.gene006652.t1 |
chr4.1 | CDS | 26746562 | 26746782 | 26746562 | ID=cds.MS.gene006652.t1;Parent=MS.gene006652.t1 |
chr4.1 | exon | 26744615 | 26745047 | 26744615 | ID=MS.gene006652.t1.exon2;Parent=MS.gene006652.t1 |
chr4.1 | CDS | 26744615 | 26745047 | 26744615 | ID=cds.MS.gene006652.t1;Parent=MS.gene006652.t1 |
Gene Sequence |
Protein sequence |