Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23155.t1 | XP_003622764.1 | 97.2 | 211 | 5 | 1 | 1 | 211 | 1 | 210 | 1.50E-105 | 392.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23155.t1 | Q9SRS5 | 78.2 | 211 | 46 | 0 | 7 | 217 | 5 | 215 | 1.4e-88 | 327.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23155.t1 | G7KY05 | 97.2 | 211 | 5 | 1 | 1 | 211 | 1 | 210 | 1.0e-105 | 392.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23155.t1 | MTR_7g051940 | 97.156 | 211 | 5 | 1 | 1 | 211 | 1 | 210 | 3.31e-146 | 407 |
MS.gene23155.t1 | MTR_7g405790 | 82.234 | 197 | 35 | 0 | 13 | 209 | 14 | 210 | 1.76e-117 | 335 |
MS.gene23155.t1 | MTR_1g078200 | 71.875 | 192 | 54 | 0 | 1 | 192 | 1 | 192 | 2.62e-95 | 279 |
MS.gene23155.t1 | MTR_8g089985 | 63.068 | 176 | 65 | 0 | 12 | 187 | 15 | 190 | 1.82e-78 | 236 |
MS.gene23155.t1 | MTR_4g064897 | 62.428 | 173 | 65 | 0 | 12 | 184 | 10 | 182 | 7.29e-78 | 234 |
MS.gene23155.t1 | MTR_3g086980 | 61.932 | 176 | 67 | 0 | 12 | 187 | 14 | 189 | 1.62e-77 | 233 |
MS.gene23155.t1 | MTR_1g052475 | 60.227 | 176 | 70 | 0 | 12 | 187 | 13 | 188 | 5.67e-77 | 232 |
MS.gene23155.t1 | MTR_2g075950 | 61.850 | 173 | 66 | 0 | 12 | 184 | 11 | 183 | 1.31e-76 | 231 |
MS.gene23155.t1 | MTR_3g069510 | 56.219 | 201 | 85 | 1 | 12 | 209 | 10 | 210 | 3.91e-76 | 230 |
MS.gene23155.t1 | MTR_2g083860 | 60.571 | 175 | 69 | 0 | 12 | 186 | 11 | 185 | 1.38e-75 | 228 |
MS.gene23155.t1 | MTR_8g036220 | 60.674 | 178 | 70 | 0 | 10 | 187 | 12 | 189 | 1.46e-75 | 229 |
MS.gene23155.t1 | MTR_0262s0050 | 60.227 | 176 | 70 | 0 | 12 | 187 | 13 | 188 | 1.90e-75 | 228 |
MS.gene23155.t1 | MTR_4g079350 | 62.428 | 173 | 65 | 0 | 12 | 184 | 11 | 183 | 2.07e-75 | 228 |
MS.gene23155.t1 | MTR_2g014990 | 62.428 | 173 | 65 | 0 | 12 | 184 | 11 | 183 | 3.82e-75 | 227 |
MS.gene23155.t1 | MTR_2g005510 | 59.444 | 180 | 70 | 1 | 10 | 186 | 8 | 187 | 5.29e-75 | 227 |
MS.gene23155.t1 | MTR_4g088090 | 60.694 | 173 | 68 | 0 | 12 | 184 | 11 | 183 | 2.52e-74 | 225 |
MS.gene23155.t1 | MTR_2g090865 | 60.656 | 183 | 72 | 0 | 12 | 194 | 9 | 191 | 8.09e-74 | 224 |
MS.gene23155.t1 | MTR_8g027220 | 55.556 | 180 | 80 | 0 | 12 | 191 | 24 | 203 | 3.66e-69 | 213 |
MS.gene23155.t1 | MTR_6g079550 | 52.683 | 205 | 88 | 2 | 12 | 216 | 10 | 205 | 5.03e-65 | 201 |
MS.gene23155.t1 | MTR_8g107070 | 56.250 | 192 | 80 | 2 | 12 | 203 | 12 | 199 | 1.55e-61 | 194 |
MS.gene23155.t1 | MTR_7g081700 | 51.149 | 174 | 85 | 0 | 12 | 185 | 6 | 179 | 1.98e-58 | 184 |
MS.gene23155.t1 | MTR_2g005500 | 49.153 | 177 | 90 | 0 | 12 | 188 | 7 | 183 | 2.68e-58 | 184 |
MS.gene23155.t1 | MTR_7g117910 | 58.042 | 143 | 60 | 0 | 12 | 154 | 18 | 160 | 7.10e-58 | 183 |
MS.gene23155.t1 | MTR_2g027660 | 46.392 | 194 | 102 | 1 | 13 | 204 | 5 | 198 | 3.58e-56 | 179 |
MS.gene23155.t1 | MTR_6g021790 | 48.851 | 174 | 89 | 0 | 12 | 185 | 4 | 177 | 5.10e-54 | 173 |
MS.gene23155.t1 | MTR_8g006970 | 52.866 | 157 | 74 | 0 | 12 | 168 | 6 | 162 | 6.26e-54 | 172 |
MS.gene23155.t1 | MTR_8g006970 | 44.330 | 194 | 108 | 0 | 12 | 205 | 20 | 213 | 6.46e-54 | 173 |
MS.gene23155.t1 | MTR_1g068740 | 43.590 | 195 | 107 | 2 | 12 | 205 | 13 | 205 | 1.51e-51 | 167 |
MS.gene23155.t1 | MTR_1g068730 | 43.814 | 194 | 106 | 2 | 12 | 204 | 13 | 204 | 2.37e-51 | 167 |
MS.gene23155.t1 | MTR_1g115325 | 42.211 | 199 | 113 | 2 | 12 | 209 | 13 | 210 | 6.10e-51 | 166 |
MS.gene23155.t1 | MTR_7g100020 | 47.879 | 165 | 85 | 1 | 12 | 175 | 13 | 177 | 2.18e-50 | 164 |
MS.gene23155.t1 | MTR_8g031660 | 49.112 | 169 | 86 | 0 | 11 | 179 | 3 | 171 | 2.33e-50 | 164 |
MS.gene23155.t1 | MTR_8g031870 | 51.923 | 156 | 75 | 0 | 13 | 168 | 5 | 160 | 3.46e-49 | 160 |
MS.gene23155.t1 | MTR_2g096550 | 40.594 | 202 | 111 | 4 | 8 | 204 | 9 | 206 | 3.19e-48 | 159 |
MS.gene23155.t1 | MTR_8g031680 | 46.821 | 173 | 92 | 0 | 11 | 183 | 3 | 175 | 1.02e-47 | 157 |
MS.gene23155.t1 | MTR_8g093740 | 47.977 | 173 | 83 | 4 | 12 | 180 | 11 | 180 | 6.76e-47 | 155 |
MS.gene23155.t1 | MTR_4g063160 | 41.919 | 198 | 107 | 4 | 12 | 206 | 13 | 205 | 1.92e-46 | 154 |
MS.gene23155.t1 | MTR_1g094220 | 41.304 | 184 | 107 | 1 | 2 | 184 | 19 | 202 | 1.40e-45 | 151 |
MS.gene23155.t1 | MTR_1g094220 | 43.023 | 172 | 97 | 1 | 2 | 172 | 19 | 190 | 3.60e-45 | 150 |
MS.gene23155.t1 | MTR_4g099470 | 50.000 | 142 | 71 | 0 | 45 | 186 | 15 | 156 | 5.80e-45 | 149 |
MS.gene23155.t1 | MTR_1g094220 | 42.286 | 175 | 100 | 1 | 2 | 175 | 19 | 193 | 6.50e-45 | 149 |
MS.gene23155.t1 | MTR_1g094220 | 43.529 | 170 | 95 | 1 | 2 | 170 | 19 | 188 | 9.38e-45 | 150 |
MS.gene23155.t1 | MTR_3g096350 | 47.093 | 172 | 86 | 4 | 12 | 180 | 10 | 179 | 9.65e-45 | 149 |
MS.gene23155.t1 | MTR_3g064390 | 45.912 | 159 | 85 | 1 | 16 | 173 | 12 | 170 | 1.01e-44 | 149 |
MS.gene23155.t1 | MTR_2g102060 | 41.538 | 195 | 99 | 3 | 16 | 207 | 12 | 194 | 2.37e-44 | 148 |
MS.gene23155.t1 | MTR_8g031830 | 49.020 | 153 | 78 | 0 | 13 | 165 | 5 | 157 | 4.41e-44 | 147 |
MS.gene23155.t1 | MTR_7g103070 | 49.682 | 157 | 77 | 2 | 15 | 169 | 17 | 173 | 3.76e-43 | 145 |
MS.gene23155.t1 | MTR_1g062760 | 50.943 | 159 | 71 | 4 | 15 | 169 | 15 | 170 | 1.34e-42 | 144 |
MS.gene23155.t1 | MTR_5g076590 | 42.500 | 160 | 92 | 0 | 16 | 175 | 12 | 171 | 2.15e-42 | 143 |
MS.gene23155.t1 | MTR_1g029450 | 45.087 | 173 | 88 | 4 | 12 | 180 | 15 | 184 | 2.84e-42 | 143 |
MS.gene23155.t1 | MTR_3g087160 | 41.558 | 154 | 90 | 0 | 15 | 168 | 10 | 163 | 4.88e-42 | 142 |
MS.gene23155.t1 | MTR_1g068730 | 47.692 | 130 | 68 | 0 | 12 | 141 | 13 | 142 | 8.26e-42 | 140 |
MS.gene23155.t1 | MTR_5g013900 | 42.208 | 154 | 89 | 0 | 15 | 168 | 10 | 163 | 9.19e-42 | 142 |
MS.gene23155.t1 | MTR_8g090215 | 41.558 | 154 | 90 | 0 | 15 | 168 | 10 | 163 | 1.06e-41 | 142 |
MS.gene23155.t1 | MTR_1g068740 | 45.139 | 144 | 71 | 1 | 12 | 155 | 13 | 148 | 4.91e-41 | 139 |
MS.gene23155.t1 | MTR_8g103550 | 42.604 | 169 | 96 | 1 | 16 | 183 | 11 | 179 | 1.28e-40 | 139 |
MS.gene23155.t1 | MTR_4g098950 | 40.260 | 154 | 92 | 0 | 15 | 168 | 10 | 163 | 9.75e-40 | 136 |
MS.gene23155.t1 | MTR_1g090717 | 44.211 | 190 | 89 | 6 | 12 | 195 | 13 | 191 | 1.81e-39 | 136 |
MS.gene23155.t1 | MTR_3g096350 | 50.382 | 131 | 60 | 4 | 12 | 139 | 10 | 138 | 3.97e-36 | 125 |
MS.gene23155.t1 | MTR_3g096350 | 50.820 | 122 | 55 | 4 | 12 | 130 | 10 | 129 | 1.99e-34 | 121 |
MS.gene23155.t1 | MTR_8g092020 | 37.725 | 167 | 97 | 3 | 14 | 173 | 12 | 178 | 1.36e-33 | 120 |
MS.gene23155.t1 | MTR_2g101890 | 36.628 | 172 | 102 | 3 | 14 | 178 | 10 | 181 | 1.39e-33 | 120 |
MS.gene23155.t1 | MTR_3g064390 | 43.200 | 125 | 71 | 0 | 16 | 140 | 12 | 136 | 2.24e-33 | 119 |
MS.gene23155.t1 | MTR_1g097420 | 36.628 | 172 | 102 | 2 | 14 | 178 | 8 | 179 | 2.37e-33 | 120 |
MS.gene23155.t1 | MTR_8g093740 | 45.714 | 140 | 70 | 3 | 45 | 180 | 10 | 147 | 3.81e-33 | 119 |
MS.gene23155.t1 | MTR_4g012940 | 36.047 | 172 | 103 | 3 | 14 | 178 | 8 | 179 | 1.40e-32 | 118 |
MS.gene23155.t1 | MTR_4g069850 | 35.119 | 168 | 102 | 3 | 14 | 174 | 8 | 175 | 3.03e-32 | 117 |
MS.gene23155.t1 | MTR_6g039490 | 34.884 | 172 | 105 | 2 | 14 | 178 | 8 | 179 | 1.51e-29 | 110 |
MS.gene23155.t1 | MTR_7g103070 | 48.718 | 117 | 58 | 2 | 55 | 169 | 1 | 117 | 2.44e-29 | 108 |
MS.gene23155.t1 | MTR_2g005500 | 36.158 | 177 | 73 | 1 | 12 | 188 | 7 | 143 | 2.47e-29 | 108 |
MS.gene23155.t1 | MTR_1g097420 | 34.682 | 173 | 104 | 3 | 13 | 178 | 36 | 206 | 4.97e-28 | 107 |
MS.gene23155.t1 | MTR_3g107707 | 27.011 | 174 | 124 | 3 | 15 | 188 | 14 | 184 | 1.75e-19 | 84.3 |
MS.gene23155.t1 | MTR_3g107713 | 27.011 | 174 | 124 | 3 | 15 | 188 | 14 | 184 | 1.93e-19 | 84.3 |
MS.gene23155.t1 | MTR_2g090875 | 32.184 | 174 | 104 | 5 | 14 | 175 | 6 | 177 | 2.01e-19 | 83.6 |
MS.gene23155.t1 | MTR_3g107717 | 27.011 | 174 | 124 | 3 | 15 | 188 | 14 | 184 | 2.09e-19 | 84.0 |
MS.gene23155.t1 | MTR_3g078260 | 30.460 | 174 | 107 | 5 | 14 | 175 | 8 | 179 | 1.57e-18 | 81.6 |
MS.gene23155.t1 | MTR_8g031810 | 40.404 | 99 | 45 | 1 | 13 | 111 | 5 | 89 | 1.63e-18 | 78.2 |
MS.gene23155.t1 | MTR_1452s0010 | 41.463 | 82 | 48 | 0 | 34 | 115 | 1 | 82 | 2.63e-18 | 78.2 |
MS.gene23155.t1 | MTR_1g069245 | 41.739 | 115 | 61 | 3 | 8 | 121 | 90 | 199 | 7.01e-18 | 80.1 |
MS.gene23155.t1 | MTR_5g022600 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 1.50e-17 | 78.6 |
MS.gene23155.t1 | MTR_4g088055 | 30.233 | 172 | 106 | 5 | 14 | 173 | 6 | 175 | 2.37e-17 | 77.8 |
MS.gene23155.t1 | MTR_8g075240 | 29.310 | 174 | 109 | 5 | 14 | 175 | 6 | 177 | 2.46e-17 | 77.8 |
MS.gene23155.t1 | MTR_6g087980 | 29.834 | 181 | 113 | 5 | 14 | 182 | 6 | 184 | 3.97e-17 | 77.8 |
MS.gene23155.t1 | MTR_4g073250 | 28.729 | 181 | 115 | 5 | 14 | 182 | 6 | 184 | 4.86e-17 | 77.0 |
MS.gene23155.t1 | MTR_1686s0010 | 32.609 | 92 | 62 | 0 | 34 | 125 | 1 | 92 | 6.56e-15 | 68.6 |
MS.gene23155.t1 | MTR_2g078000 | 57.143 | 49 | 21 | 0 | 75 | 123 | 46 | 94 | 7.17e-15 | 68.9 |
MS.gene23155.t1 | MTR_4g113620 | 24.699 | 166 | 113 | 4 | 15 | 180 | 14 | 167 | 1.03e-14 | 71.2 |
MS.gene23155.t1 | MTR_5g092060 | 24.118 | 170 | 119 | 4 | 15 | 177 | 105 | 271 | 7.89e-13 | 67.0 |
MS.gene23155.t1 | MTR_8g099250 | 61.702 | 47 | 18 | 0 | 10 | 56 | 12 | 58 | 2.91e-12 | 60.8 |
MS.gene23155.t1 | MTR_3g053480 | 59.574 | 47 | 19 | 0 | 10 | 56 | 12 | 58 | 5.07e-12 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene23155.t1 | AT3G07410 | 79.327 | 208 | 43 | 0 | 10 | 217 | 8 | 215 | 2.82e-119 | 339 |
MS.gene23155.t1 | AT2G31680 | 83.249 | 197 | 32 | 1 | 5 | 200 | 3 | 199 | 4.01e-118 | 336 |
MS.gene23155.t1 | AT1G05810 | 80.000 | 205 | 41 | 0 | 5 | 209 | 3 | 207 | 4.36e-118 | 336 |
MS.gene23155.t1 | AT1G05810 | 80.000 | 205 | 41 | 0 | 5 | 209 | 49 | 253 | 7.73e-118 | 337 |
MS.gene23155.t1 | AT2G43130 | 77.295 | 207 | 47 | 0 | 5 | 211 | 3 | 209 | 3.82e-116 | 331 |
MS.gene23155.t1 | AT5G47520 | 66.509 | 212 | 64 | 2 | 1 | 212 | 1 | 205 | 1.43e-95 | 279 |
MS.gene23155.t1 | AT1G07410 | 63.006 | 173 | 64 | 0 | 12 | 184 | 10 | 182 | 5.04e-78 | 234 |
MS.gene23155.t1 | AT4G39990 | 57.653 | 196 | 81 | 1 | 12 | 205 | 15 | 210 | 9.19e-78 | 234 |
MS.gene23155.t1 | AT3G12160 | 60.221 | 181 | 72 | 0 | 12 | 192 | 13 | 193 | 1.06e-77 | 234 |
MS.gene23155.t1 | AT4G18430 | 63.218 | 174 | 64 | 0 | 12 | 185 | 11 | 184 | 2.43e-77 | 233 |
MS.gene23155.t1 | AT5G60860 | 61.202 | 183 | 71 | 0 | 12 | 194 | 11 | 193 | 5.44e-77 | 232 |
MS.gene23155.t1 | AT1G09630 | 55.897 | 195 | 84 | 1 | 1 | 195 | 1 | 193 | 7.46e-77 | 232 |
MS.gene23155.t1 | AT1G06400 | 58.470 | 183 | 76 | 0 | 12 | 194 | 11 | 193 | 2.73e-76 | 230 |
MS.gene23155.t1 | AT1G16920 | 63.158 | 171 | 63 | 0 | 12 | 182 | 11 | 181 | 3.33e-76 | 230 |
MS.gene23155.t1 | AT5G65270 | 54.774 | 199 | 85 | 1 | 12 | 205 | 15 | 213 | 4.61e-76 | 230 |
MS.gene23155.t1 | AT5G59150 | 63.158 | 171 | 63 | 0 | 12 | 182 | 10 | 180 | 4.93e-76 | 229 |
MS.gene23155.t1 | AT3G46830 | 62.573 | 171 | 64 | 0 | 12 | 182 | 10 | 180 | 5.03e-76 | 229 |
MS.gene23155.t1 | AT3G46830 | 62.573 | 171 | 64 | 0 | 12 | 182 | 10 | 180 | 5.03e-76 | 229 |
MS.gene23155.t1 | AT1G28550 | 61.143 | 175 | 68 | 0 | 12 | 186 | 11 | 185 | 2.34e-75 | 228 |
MS.gene23155.t1 | AT5G47960 | 62.428 | 173 | 65 | 0 | 12 | 184 | 13 | 185 | 2.47e-75 | 228 |
MS.gene23155.t1 | AT4G18800 | 60.694 | 173 | 68 | 0 | 12 | 184 | 11 | 183 | 2.24e-74 | 225 |
MS.gene23155.t1 | AT2G33870 | 60.000 | 175 | 70 | 0 | 12 | 186 | 11 | 185 | 3.82e-74 | 225 |
MS.gene23155.t1 | AT3G15060 | 55.665 | 203 | 79 | 2 | 12 | 210 | 11 | 206 | 9.04e-74 | 224 |
MS.gene23155.t1 | AT5G45750 | 56.831 | 183 | 79 | 0 | 12 | 194 | 11 | 193 | 9.86e-74 | 224 |
MS.gene23155.t1 | AT1G73640 | 48.101 | 237 | 116 | 3 | 1 | 237 | 1 | 230 | 4.76e-69 | 213 |
MS.gene23155.t1 | AT1G18200 | 58.152 | 184 | 76 | 1 | 1 | 184 | 1 | 183 | 6.52e-68 | 209 |
MS.gene23155.t1 | AT1G01200 | 53.299 | 197 | 88 | 3 | 12 | 204 | 26 | 222 | 8.28e-65 | 202 |
MS.gene23155.t1 | AT4G17170 | 46.154 | 195 | 105 | 0 | 13 | 207 | 5 | 199 | 1.83e-56 | 179 |
MS.gene23155.t1 | AT4G35860 | 49.425 | 174 | 88 | 0 | 12 | 185 | 4 | 177 | 3.48e-56 | 179 |
MS.gene23155.t1 | AT4G17530 | 53.503 | 157 | 73 | 0 | 12 | 168 | 6 | 162 | 3.17e-55 | 176 |
MS.gene23155.t1 | AT3G11730 | 51.220 | 164 | 80 | 0 | 12 | 175 | 6 | 169 | 5.66e-55 | 176 |
MS.gene23155.t1 | AT1G02130 | 44.330 | 194 | 108 | 0 | 12 | 205 | 6 | 199 | 1.09e-54 | 175 |
MS.gene23155.t1 | AT4G17160 | 49.711 | 173 | 87 | 0 | 13 | 185 | 5 | 177 | 6.30e-54 | 173 |
MS.gene23155.t1 | AT5G47200 | 52.866 | 157 | 74 | 0 | 12 | 168 | 6 | 162 | 3.40e-53 | 171 |
MS.gene23155.t1 | AT5G59150 | 59.843 | 127 | 51 | 0 | 56 | 182 | 3 | 129 | 3.16e-52 | 167 |
MS.gene23155.t1 | AT3G46060 | 43.590 | 195 | 107 | 2 | 12 | 205 | 13 | 205 | 3.55e-51 | 166 |
MS.gene23155.t1 | AT3G46060 | 43.590 | 195 | 107 | 2 | 12 | 205 | 13 | 205 | 3.55e-51 | 166 |
MS.gene23155.t1 | AT3G46060 | 43.590 | 195 | 107 | 2 | 12 | 205 | 13 | 205 | 3.55e-51 | 166 |
MS.gene23155.t1 | AT5G59840 | 43.147 | 197 | 105 | 3 | 12 | 205 | 13 | 205 | 1.80e-50 | 164 |
MS.gene23155.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 12 | 175 | 13 | 177 | 8.65e-50 | 162 |
MS.gene23155.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 12 | 175 | 13 | 177 | 8.65e-50 | 162 |
MS.gene23155.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 12 | 175 | 13 | 177 | 8.65e-50 | 162 |
MS.gene23155.t1 | AT3G09900 | 45.503 | 189 | 97 | 3 | 12 | 199 | 13 | 196 | 9.70e-49 | 160 |
MS.gene23155.t1 | AT5G03520 | 47.879 | 165 | 85 | 1 | 12 | 175 | 13 | 177 | 2.61e-48 | 159 |
MS.gene23155.t1 | AT3G54840 | 44.767 | 172 | 90 | 2 | 16 | 186 | 35 | 202 | 7.05e-46 | 152 |
MS.gene23155.t1 | AT3G54840 | 44.444 | 171 | 90 | 2 | 17 | 186 | 2 | 168 | 1.04e-45 | 150 |
MS.gene23155.t1 | AT3G54840 | 47.097 | 155 | 81 | 1 | 16 | 169 | 35 | 189 | 1.33e-45 | 151 |
MS.gene23155.t1 | AT4G19640 | 41.667 | 168 | 90 | 1 | 16 | 183 | 12 | 171 | 8.25e-45 | 149 |
MS.gene23155.t1 | AT1G43890 | 45.098 | 204 | 88 | 6 | 12 | 211 | 11 | 194 | 8.27e-45 | 150 |
MS.gene23155.t1 | AT1G43890 | 45.098 | 204 | 88 | 6 | 12 | 211 | 11 | 194 | 8.27e-45 | 150 |
MS.gene23155.t1 | AT1G43890 | 45.098 | 204 | 88 | 6 | 12 | 211 | 11 | 194 | 8.27e-45 | 150 |
MS.gene23155.t1 | AT5G45130 | 40.314 | 191 | 103 | 3 | 16 | 206 | 12 | 191 | 2.45e-44 | 148 |
MS.gene23155.t1 | AT5G45130 | 40.212 | 189 | 102 | 3 | 18 | 206 | 22 | 199 | 2.74e-43 | 145 |
MS.gene23155.t1 | AT2G44610 | 42.208 | 154 | 89 | 0 | 15 | 168 | 10 | 163 | 5.13e-42 | 142 |
MS.gene23155.t1 | AT5G03530 | 49.697 | 165 | 78 | 4 | 8 | 169 | 7 | 169 | 1.31e-41 | 141 |
MS.gene23155.t1 | AT5G03530 | 49.697 | 165 | 78 | 4 | 8 | 169 | 7 | 169 | 1.31e-41 | 141 |
MS.gene23155.t1 | AT5G10260 | 40.909 | 154 | 91 | 0 | 15 | 168 | 10 | 163 | 2.38e-41 | 140 |
MS.gene23155.t1 | AT4G35860 | 49.618 | 131 | 66 | 0 | 55 | 185 | 1 | 131 | 4.90e-41 | 139 |
MS.gene23155.t1 | AT2G22290 | 40.909 | 154 | 91 | 0 | 15 | 168 | 10 | 163 | 2.57e-40 | 138 |
MS.gene23155.t1 | AT4G39890 | 41.290 | 155 | 90 | 1 | 15 | 168 | 10 | 164 | 5.12e-40 | 137 |
MS.gene23155.t1 | AT5G64990 | 40.260 | 154 | 92 | 0 | 15 | 168 | 8 | 161 | 1.62e-38 | 133 |
MS.gene23155.t1 | AT5G03520 | 41.509 | 159 | 87 | 3 | 49 | 206 | 40 | 193 | 1.96e-36 | 128 |
MS.gene23155.t1 | AT5G64990 | 38.509 | 161 | 92 | 1 | 15 | 168 | 8 | 168 | 9.04e-36 | 126 |
MS.gene23155.t1 | AT3G09910 | 43.182 | 176 | 93 | 4 | 8 | 179 | 7 | 179 | 4.45e-35 | 124 |
MS.gene23155.t1 | AT3G09910 | 43.182 | 176 | 93 | 4 | 8 | 179 | 7 | 179 | 4.45e-35 | 124 |
MS.gene23155.t1 | AT3G09910 | 45.181 | 166 | 84 | 4 | 8 | 169 | 7 | 169 | 8.30e-35 | 124 |
MS.gene23155.t1 | AT3G09910 | 45.181 | 166 | 84 | 4 | 8 | 169 | 7 | 169 | 8.30e-35 | 124 |
MS.gene23155.t1 | AT3G09910 | 45.181 | 166 | 84 | 4 | 8 | 169 | 7 | 169 | 8.30e-35 | 124 |
MS.gene23155.t1 | AT1G22740 | 38.323 | 167 | 96 | 3 | 14 | 173 | 8 | 174 | 1.16e-34 | 123 |
MS.gene23155.t1 | AT4G19640 | 40.769 | 130 | 77 | 0 | 16 | 145 | 12 | 141 | 6.90e-34 | 120 |
MS.gene23155.t1 | AT1G52280 | 37.209 | 172 | 101 | 3 | 14 | 178 | 8 | 179 | 9.16e-34 | 121 |
MS.gene23155.t1 | AT2G21880 | 39.506 | 162 | 91 | 3 | 14 | 168 | 9 | 170 | 9.74e-34 | 121 |
MS.gene23155.t1 | AT4G19640 | 40.458 | 131 | 78 | 0 | 16 | 146 | 12 | 142 | 1.13e-33 | 120 |
MS.gene23155.t1 | AT3G18820 | 37.500 | 168 | 98 | 3 | 14 | 174 | 8 | 175 | 1.16e-33 | 121 |
MS.gene23155.t1 | AT3G16100 | 36.628 | 172 | 102 | 2 | 14 | 178 | 8 | 179 | 4.65e-33 | 119 |
MS.gene23155.t1 | AT1G49300 | 37.037 | 162 | 95 | 3 | 14 | 168 | 8 | 169 | 1.30e-30 | 113 |
MS.gene23155.t1 | AT1G49300 | 37.037 | 162 | 95 | 3 | 14 | 168 | 8 | 169 | 1.30e-30 | 113 |
MS.gene23155.t1 | AT4G09720 | 35.465 | 172 | 104 | 2 | 14 | 178 | 8 | 179 | 1.31e-30 | 113 |
MS.gene23155.t1 | AT4G09720 | 34.463 | 177 | 104 | 2 | 14 | 178 | 8 | 184 | 9.96e-30 | 111 |
MS.gene23155.t1 | AT5G39620 | 36.702 | 188 | 111 | 5 | 11 | 191 | 2 | 188 | 1.36e-29 | 110 |
MS.gene23155.t1 | AT5G46025 | 50.000 | 106 | 52 | 1 | 76 | 180 | 6 | 111 | 6.45e-29 | 105 |
MS.gene23155.t1 | AT4G09720 | 33.333 | 183 | 104 | 2 | 14 | 178 | 8 | 190 | 1.10e-28 | 108 |
MS.gene23155.t1 | AT2G21880 | 37.931 | 145 | 83 | 3 | 31 | 168 | 1 | 145 | 1.35e-25 | 99.8 |
MS.gene23155.t1 | AT2G21880 | 37.931 | 145 | 83 | 3 | 31 | 168 | 1 | 145 | 1.35e-25 | 99.8 |
MS.gene23155.t1 | AT2G21880 | 34.568 | 162 | 91 | 4 | 14 | 168 | 9 | 162 | 6.05e-24 | 95.9 |
MS.gene23155.t1 | AT2G44690 | 33.333 | 180 | 106 | 6 | 14 | 181 | 18 | 195 | 1.52e-21 | 89.7 |
MS.gene23155.t1 | AT5G55080 | 28.161 | 174 | 114 | 3 | 6 | 175 | 5 | 171 | 3.78e-21 | 89.0 |
MS.gene23155.t1 | AT4G09720 | 35.915 | 142 | 84 | 2 | 44 | 178 | 4 | 145 | 4.14e-21 | 87.4 |
MS.gene23155.t1 | AT4G09720 | 35.915 | 142 | 84 | 2 | 44 | 178 | 4 | 145 | 4.14e-21 | 87.4 |
MS.gene23155.t1 | AT4G09720 | 35.915 | 142 | 84 | 2 | 44 | 178 | 4 | 145 | 4.14e-21 | 87.4 |
MS.gene23155.t1 | AT5G20020 | 28.571 | 161 | 112 | 3 | 15 | 175 | 14 | 171 | 1.51e-19 | 84.3 |
MS.gene23155.t1 | AT5G20010 | 28.571 | 161 | 112 | 3 | 15 | 175 | 14 | 171 | 2.31e-19 | 84.0 |
MS.gene23155.t1 | AT5G55190 | 27.011 | 174 | 124 | 3 | 15 | 188 | 14 | 184 | 2.64e-19 | 84.0 |
MS.gene23155.t1 | AT5G45970 | 30.233 | 172 | 106 | 5 | 14 | 173 | 6 | 175 | 5.21e-18 | 79.7 |
MS.gene23155.t1 | AT5G62880 | 29.310 | 174 | 109 | 5 | 14 | 175 | 8 | 179 | 6.54e-18 | 80.1 |
MS.gene23155.t1 | AT4G35020 | 29.310 | 174 | 109 | 5 | 14 | 175 | 6 | 177 | 1.31e-17 | 79.0 |
MS.gene23155.t1 | AT4G35020 | 29.310 | 174 | 109 | 5 | 14 | 175 | 6 | 177 | 1.31e-17 | 79.0 |
MS.gene23155.t1 | AT4G35020 | 29.310 | 174 | 109 | 5 | 14 | 175 | 6 | 177 | 1.31e-17 | 79.0 |
MS.gene23155.t1 | AT3G48040 | 28.736 | 174 | 110 | 5 | 14 | 175 | 8 | 179 | 2.09e-17 | 78.6 |
MS.gene23155.t1 | AT3G51300 | 30.233 | 172 | 106 | 5 | 16 | 175 | 8 | 177 | 3.55e-17 | 77.4 |
MS.gene23155.t1 | AT1G20090 | 29.310 | 174 | 109 | 5 | 14 | 175 | 5 | 176 | 3.56e-17 | 77.4 |
MS.gene23155.t1 | AT1G75840 | 28.736 | 174 | 110 | 5 | 14 | 175 | 6 | 177 | 4.59e-17 | 77.4 |
MS.gene23155.t1 | AT2G17800 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 6.44e-17 | 77.0 |
MS.gene23155.t1 | AT2G17800 | 29.885 | 174 | 108 | 5 | 14 | 175 | 6 | 177 | 6.44e-17 | 77.0 |
MS.gene23155.t1 | AT4G28950 | 28.492 | 179 | 116 | 5 | 14 | 182 | 6 | 182 | 7.37e-17 | 77.0 |
MS.gene23155.t1 | AT4G35950 | 29.310 | 174 | 109 | 5 | 14 | 175 | 6 | 177 | 8.50e-17 | 76.6 |
MS.gene23155.t1 | AT5G62880 | 32.847 | 137 | 82 | 4 | 16 | 151 | 10 | 137 | 7.60e-16 | 73.9 |
MS.gene23155.t1 | AT3G48040 | 31.724 | 145 | 89 | 4 | 14 | 157 | 8 | 143 | 2.57e-15 | 72.0 |
MS.gene23155.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 16 | 128 | 8 | 119 | 7.30e-14 | 67.4 |
MS.gene23155.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 16 | 128 | 8 | 119 | 7.30e-14 | 67.4 |
MS.gene23155.t1 | AT4G08190 | 46.970 | 66 | 32 | 1 | 103 | 168 | 65 | 127 | 5.84e-12 | 61.6 |
Find 48 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAAGAAGGTTTGTTCTTTA+TGG | 0.172410 | 7.2:+50667569 | MS.gene23155:CDS |
CACAGACAATTCAGCCTTAT+AGG | 0.220260 | 7.2:-50667691 | None:intergenic |
CCCCATCTTAAAACTTTATT+CGG | 0.258354 | 7.2:-50670072 | None:intergenic |
GCTTATTATCGTGGTGCTTT+TGG | 0.272296 | 7.2:+50658892 | MS.gene23155:CDS |
CTTAAACTCCGATTCCTATA+AGG | 0.343067 | 7.2:+50667677 | MS.gene23155:CDS |
AATCGAGTAACCCTGGCTAA+TGG | 0.352245 | 7.2:+50667714 | MS.gene23155:CDS |
AAGAAGTGAAAGCACAGATC+TGG | 0.376183 | 7.2:+50658830 | MS.gene23155:CDS |
TCAAATTCAAAAGCAACAAT+TGG | 0.379555 | 7.2:+50658769 | MS.gene23155:CDS |
GGTGGGAAATAAGTGTGATT+TGG | 0.403953 | 7.2:+50667500 | MS.gene23155:CDS |
TTGTTGTTTATGATATTAGT+AGG | 0.412303 | 7.2:+50658920 | MS.gene23155:CDS |
ATCGAGTAACCCTGGCTAAT+GGG | 0.427815 | 7.2:+50667715 | MS.gene23155:CDS |
CTCTTCAAAATCGTCCTAAT+CGG | 0.438519 | 7.2:+50658688 | MS.gene23155:CDS |
CTACGGCAGAGTCGCCGATT+AGG | 0.443849 | 7.2:-50658702 | None:intergenic |
GTAACCCTGGCTAATGGGTC+TGG | 0.448346 | 7.2:+50667720 | MS.gene23155:CDS |
CGAACTCGTTTCGCGCGAAT+CGG | 0.454934 | 7.2:-50658744 | None:intergenic |
TGATATTATTGTAAATTTCA+CGG | 0.460213 | 7.2:-50667644 | None:intergenic |
CAATTCAGCCTTATAGGAAT+CGG | 0.467617 | 7.2:-50667685 | None:intergenic |
TGACAATCTCAAAAGCCGTT+TGG | 0.477114 | 7.2:-50667620 | None:intergenic |
AATCGGAGTTTAAGACTTTG+CGG | 0.478253 | 7.2:-50667668 | None:intergenic |
TTGATCCAGACCCATTAGCC+AGG | 0.478440 | 7.2:-50667725 | None:intergenic |
GAACTCGTTTCGCGCGAATC+GGG | 0.485723 | 7.2:-50658743 | None:intergenic |
AAAGCTCTTGCAGAAGAAGA+AGG | 0.504187 | 7.2:+50667555 | MS.gene23155:CDS |
CGATTCTACTAATGTCCAAA+CGG | 0.512036 | 7.2:+50667605 | MS.gene23155:CDS |
AGAAGTGAAAGCACAGATCT+GGG | 0.521054 | 7.2:+50658831 | MS.gene23155:CDS |
GTTACTTCTGCTTATTATCG+TGG | 0.527788 | 7.2:+50658883 | MS.gene23155:CDS |
GCACAGATCTGGGATACTGC+TGG | 0.534325 | 7.2:+50658841 | MS.gene23155:CDS |
CACCGTTGCGAGAATGTTGG+TGG | 0.536683 | 7.2:+50667482 | MS.gene23155:CDS |
TCAGAAGAAAACAACGAAGA+AGG | 0.540081 | 7.2:+50658652 | MS.gene23155:CDS |
CGTTTCGCGCGAATCGGGAG+AGG | 0.545663 | 7.2:-50658738 | None:intergenic |
GTTTATGATATTAGTAGGAG+AGG | 0.553351 | 7.2:+50658925 | MS.gene23155:CDS |
GGGATACTGCTGGACAAGAA+AGG | 0.554659 | 7.2:+50658851 | MS.gene23155:CDS |
TATCAGAGAGGTGAGCATAG+AGG | 0.560205 | 7.2:+50667527 | MS.gene23155:CDS |
TTCGCGCGAATCGGGAGAGG+AGG | 0.560289 | 7.2:-50658735 | None:intergenic |
GAAGAAAACAACGAAGAAGG+AGG | 0.579942 | 7.2:+50658655 | MS.gene23155:CDS |
TGAGTTTCAGACGCAGATGG+TGG | 0.580080 | 7.2:+50658795 | MS.gene23155:CDS |
GTCTGTGAATCGAGTAACCC+TGG | 0.582672 | 7.2:+50667707 | MS.gene23155:CDS |
AGTTGAGTTTCAGACGCAGA+TGG | 0.592347 | 7.2:+50658792 | MS.gene23155:CDS |
ACGCAGATGGTGGAGATCGA+TGG | 0.599170 | 7.2:+50658805 | MS.gene23155:CDS |
TTTGTTCTTTATGGAGACAT+CGG | 0.603200 | 7.2:+50667578 | MS.gene23155:CDS |
CAGAGAGGTGAGCATAGAGG+AGG | 0.611372 | 7.2:+50667530 | MS.gene23155:CDS |
TCCCACCAACATTCTCGCAA+CGG | 0.615034 | 7.2:-50667484 | None:intergenic |
AGAGAGGTGAGCATAGAGGA+GGG | 0.616692 | 7.2:+50667531 | MS.gene23155:CDS |
TGATCCAGACCCATTAGCCA+GGG | 0.619067 | 7.2:-50667724 | None:intergenic |
CTAATCGGCGACTCTGCCGT+AGG | 0.635372 | 7.2:+50658703 | MS.gene23155:CDS |
ACCGTTGCGAGAATGTTGGT+GGG | 0.661082 | 7.2:+50667483 | MS.gene23155:CDS |
TGATTTGGAGAATATCAGAG+AGG | 0.677734 | 7.2:+50667515 | MS.gene23155:CDS |
TAGCACCGTTGCGAGAATGT+TGG | 0.709575 | 7.2:+50667479 | MS.gene23155:CDS |
ATACATCACAAAGCTCTATG+CGG | 0.728171 | 7.2:-50669968 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 50658649 | 50670079 | 50658649 | ID=MS.gene23155 |
chr7.2 | mRNA | 50658649 | 50670079 | 50658649 | ID=MS.gene23155.t1;Parent=MS.gene23155 |
chr7.2 | exon | 50658649 | 50658988 | 50658649 | ID=MS.gene23155.t1.exon1;Parent=MS.gene23155.t1 |
chr7.2 | CDS | 50658649 | 50658988 | 50658649 | ID=cds.MS.gene23155.t1;Parent=MS.gene23155.t1 |
chr7.2 | exon | 50667469 | 50667753 | 50667469 | ID=MS.gene23155.t1.exon2;Parent=MS.gene23155.t1 |
chr7.2 | CDS | 50667469 | 50667753 | 50667469 | ID=cds.MS.gene23155.t1;Parent=MS.gene23155.t1 |
chr7.2 | exon | 50669958 | 50670079 | 50669958 | ID=MS.gene23155.t1.exon3;Parent=MS.gene23155.t1 |
chr7.2 | CDS | 50669958 | 50670079 | 50669958 | ID=cds.MS.gene23155.t1;Parent=MS.gene23155.t1 |
Gene Sequence |
Protein sequence |