Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07529.t1 | XP_013468899.1 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 1.80E-118 | 435.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07529.t1 | Q9FGK5 | 85.3 | 224 | 28 | 2 | 1 | 223 | 1 | 220 | 1.4e-100 | 367.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07529.t1 | A0A072VMV1 | 99.1 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 1.3e-118 | 435.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049142 | MS.gene07529 | 0.816052 | 6.75E-52 | -1.69E-46 |
MS.gene04918 | MS.gene07529 | 0.82197 | 3.04E-53 | -1.69E-46 |
MS.gene04920 | MS.gene07529 | 0.809828 | 1.56E-50 | -1.69E-46 |
MS.gene049254 | MS.gene07529 | 0.862328 | 5.48E-64 | -1.69E-46 |
MS.gene049343 | MS.gene07529 | 0.814803 | 1.28E-51 | -1.69E-46 |
MS.gene049350 | MS.gene07529 | 0.80942 | 1.91E-50 | -1.69E-46 |
MS.gene049499 | MS.gene07529 | 0.815588 | 8.56E-52 | -1.69E-46 |
MS.gene049652 | MS.gene07529 | 0.807414 | 5.11E-50 | -1.69E-46 |
MS.gene049711 | MS.gene07529 | 0.817639 | 2.97E-52 | -1.69E-46 |
MS.gene050026 | MS.gene07529 | 0.804819 | 1.80E-49 | -1.69E-46 |
MS.gene050559 | MS.gene07529 | 0.811656 | 6.28E-51 | -1.69E-46 |
MS.gene050561 | MS.gene07529 | 0.801809 | 7.56E-49 | -1.69E-46 |
MS.gene050562 | MS.gene07529 | 0.800691 | 1.28E-48 | -1.69E-46 |
MS.gene051247 | MS.gene07529 | 0.804836 | 1.78E-49 | -1.69E-46 |
MS.gene051279 | MS.gene07529 | 0.800353 | 1.50E-48 | -1.69E-46 |
MS.gene051332 | MS.gene07529 | 0.814361 | 1.60E-51 | -1.69E-46 |
MS.gene051700 | MS.gene07529 | 0.810264 | 1.26E-50 | -1.69E-46 |
MS.gene051744 | MS.gene07529 | 0.850123 | 2.08E-60 | -1.69E-46 |
MS.gene051832 | MS.gene07529 | 0.801817 | 7.53E-49 | -1.69E-46 |
MS.gene052463 | MS.gene07529 | 0.830287 | 3.20E-55 | -1.69E-46 |
MS.gene052519 | MS.gene07529 | 0.824034 | 1.00E-53 | -1.69E-46 |
MS.gene052533 | MS.gene07529 | 0.826997 | 2.00E-54 | -1.69E-46 |
MS.gene052582 | MS.gene07529 | 0.815508 | 8.92E-52 | -1.69E-46 |
MS.gene052584 | MS.gene07529 | 0.824838 | 6.50E-54 | -1.69E-46 |
MS.gene052773 | MS.gene07529 | 0.806549 | 7.79E-50 | -1.69E-46 |
MS.gene053226 | MS.gene07529 | 0.850159 | 2.03E-60 | -1.69E-46 |
MS.gene053272 | MS.gene07529 | -0.81424 | 1.70E-51 | -1.69E-46 |
MS.gene05365 | MS.gene07529 | 0.807392 | 5.17E-50 | -1.69E-46 |
MS.gene053963 | MS.gene07529 | 0.802988 | 4.32E-49 | -1.69E-46 |
MS.gene054142 | MS.gene07529 | 0.800943 | 1.14E-48 | -1.69E-46 |
MS.gene054222 | MS.gene07529 | 0.802189 | 6.31E-49 | -1.69E-46 |
MS.gene05423 | MS.gene07529 | 0.845353 | 4.28E-59 | -1.69E-46 |
MS.gene05458 | MS.gene07529 | 0.825228 | 5.26E-54 | -1.69E-46 |
MS.gene054651 | MS.gene07529 | 0.839746 | 1.32E-57 | -1.69E-46 |
MS.gene054775 | MS.gene07529 | 0.810822 | 9.52E-51 | -1.69E-46 |
MS.gene054991 | MS.gene07529 | 0.832845 | 7.49E-56 | -1.69E-46 |
MS.gene055229 | MS.gene07529 | 0.81297 | 3.24E-51 | -1.69E-46 |
MS.gene055513 | MS.gene07529 | 0.820648 | 6.14E-53 | -1.69E-46 |
MS.gene055586 | MS.gene07529 | 0.824869 | 6.39E-54 | -1.69E-46 |
MS.gene055589 | MS.gene07529 | 0.819291 | 1.25E-52 | -1.69E-46 |
MS.gene055801 | MS.gene07529 | 0.805226 | 1.48E-49 | -1.69E-46 |
MS.gene056050 | MS.gene07529 | 0.825924 | 3.59E-54 | -1.69E-46 |
MS.gene056699 | MS.gene07529 | 0.8156 | 8.51E-52 | -1.69E-46 |
MS.gene056776 | MS.gene07529 | 0.814779 | 1.29E-51 | -1.69E-46 |
MS.gene05686 | MS.gene07529 | 0.834046 | 3.76E-56 | -1.69E-46 |
MS.gene05689 | MS.gene07529 | 0.810774 | 9.75E-51 | -1.69E-46 |
MS.gene05690 | MS.gene07529 | 0.81945 | 1.15E-52 | -1.69E-46 |
MS.gene057102 | MS.gene07529 | 0.866954 | 1.95E-65 | -1.69E-46 |
MS.gene057208 | MS.gene07529 | 0.826689 | 2.36E-54 | -1.69E-46 |
MS.gene058008 | MS.gene07529 | 0.812368 | 4.39E-51 | -1.69E-46 |
MS.gene058037 | MS.gene07529 | 0.801716 | 7.90E-49 | -1.69E-46 |
MS.gene058159 | MS.gene07529 | 0.802126 | 6.50E-49 | -1.69E-46 |
MS.gene058279 | MS.gene07529 | 0.840286 | 9.53E-58 | -1.69E-46 |
MS.gene058625 | MS.gene07529 | 0.819723 | 1.00E-52 | -1.69E-46 |
MS.gene059170 | MS.gene07529 | 0.813411 | 2.60E-51 | -1.69E-46 |
MS.gene05952 | MS.gene07529 | 0.824504 | 7.79E-54 | -1.69E-46 |
MS.gene059625 | MS.gene07529 | 0.850569 | 1.56E-60 | -1.69E-46 |
MS.gene05985 | MS.gene07529 | -0.866238 | 3.30E-65 | -1.69E-46 |
MS.gene059900 | MS.gene07529 | -0.81185 | 5.70E-51 | -1.69E-46 |
MS.gene059901 | MS.gene07529 | -0.802146 | 6.44E-49 | -1.69E-46 |
MS.gene059935 | MS.gene07529 | 0.825915 | 3.61E-54 | -1.69E-46 |
MS.gene059965 | MS.gene07529 | 0.800881 | 1.17E-48 | -1.69E-46 |
MS.gene060365 | MS.gene07529 | 0.840385 | 8.98E-58 | -1.69E-46 |
MS.gene060429 | MS.gene07529 | 0.803974 | 2.70E-49 | -1.69E-46 |
MS.gene060521 | MS.gene07529 | 0.812524 | 4.06E-51 | -1.69E-46 |
MS.gene060935 | MS.gene07529 | 0.812916 | 3.33E-51 | -1.69E-46 |
MS.gene060937 | MS.gene07529 | 0.824371 | 8.37E-54 | -1.69E-46 |
MS.gene061100 | MS.gene07529 | 0.824391 | 8.28E-54 | -1.69E-46 |
MS.gene061160 | MS.gene07529 | 0.809833 | 1.56E-50 | -1.69E-46 |
MS.gene061188 | MS.gene07529 | 0.827534 | 1.48E-54 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07529.t1 | MTR_1g078200 | 99.107 | 224 | 2 | 0 | 1 | 224 | 1 | 224 | 2.44e-167 | 460 |
MS.gene07529.t1 | MTR_7g405790 | 64.651 | 215 | 64 | 2 | 13 | 223 | 14 | 220 | 9.00e-96 | 279 |
MS.gene07529.t1 | MTR_7g051940 | 73.889 | 180 | 47 | 0 | 13 | 192 | 12 | 191 | 8.16e-93 | 271 |
MS.gene07529.t1 | MTR_4g064897 | 59.906 | 212 | 78 | 3 | 12 | 223 | 10 | 214 | 6.23e-88 | 259 |
MS.gene07529.t1 | MTR_8g089985 | 62.887 | 194 | 72 | 0 | 12 | 205 | 15 | 208 | 1.20e-86 | 256 |
MS.gene07529.t1 | MTR_3g086980 | 57.820 | 211 | 86 | 1 | 12 | 222 | 14 | 221 | 3.55e-85 | 252 |
MS.gene07529.t1 | MTR_0262s0050 | 55.450 | 211 | 90 | 1 | 12 | 222 | 13 | 219 | 2.84e-82 | 244 |
MS.gene07529.t1 | MTR_2g005510 | 55.556 | 216 | 91 | 2 | 8 | 223 | 9 | 219 | 3.50e-82 | 244 |
MS.gene07529.t1 | MTR_1g052475 | 55.660 | 212 | 91 | 3 | 12 | 222 | 13 | 222 | 7.20e-82 | 244 |
MS.gene07529.t1 | MTR_3g069510 | 55.605 | 223 | 91 | 4 | 1 | 223 | 1 | 215 | 1.24e-81 | 243 |
MS.gene07529.t1 | MTR_4g079350 | 57.075 | 212 | 85 | 3 | 12 | 223 | 11 | 216 | 1.71e-80 | 240 |
MS.gene07529.t1 | MTR_2g014990 | 56.604 | 212 | 86 | 3 | 12 | 223 | 11 | 216 | 4.37e-80 | 239 |
MS.gene07529.t1 | MTR_2g083860 | 63.006 | 173 | 64 | 0 | 12 | 184 | 11 | 183 | 2.59e-79 | 237 |
MS.gene07529.t1 | MTR_4g088090 | 55.189 | 212 | 89 | 3 | 12 | 223 | 11 | 216 | 3.80e-79 | 236 |
MS.gene07529.t1 | MTR_2g075950 | 54.245 | 212 | 91 | 2 | 12 | 223 | 11 | 216 | 2.02e-78 | 234 |
MS.gene07529.t1 | MTR_2g090865 | 55.660 | 212 | 87 | 2 | 12 | 223 | 9 | 213 | 9.64e-77 | 230 |
MS.gene07529.t1 | MTR_8g036220 | 51.869 | 214 | 101 | 1 | 12 | 223 | 14 | 227 | 1.66e-76 | 230 |
MS.gene07529.t1 | MTR_8g027220 | 59.239 | 184 | 74 | 1 | 7 | 190 | 20 | 202 | 2.32e-76 | 230 |
MS.gene07529.t1 | MTR_6g079550 | 52.582 | 213 | 93 | 3 | 12 | 223 | 10 | 215 | 1.08e-68 | 210 |
MS.gene07529.t1 | MTR_8g107070 | 54.315 | 197 | 89 | 1 | 12 | 208 | 12 | 207 | 1.00e-65 | 204 |
MS.gene07529.t1 | MTR_7g117910 | 62.238 | 143 | 54 | 0 | 12 | 154 | 18 | 160 | 1.07e-64 | 199 |
MS.gene07529.t1 | MTR_7g081700 | 45.283 | 212 | 100 | 3 | 12 | 223 | 6 | 201 | 5.97e-57 | 179 |
MS.gene07529.t1 | MTR_2g027660 | 43.602 | 211 | 115 | 1 | 13 | 223 | 5 | 211 | 2.19e-56 | 178 |
MS.gene07529.t1 | MTR_2g005500 | 51.807 | 166 | 80 | 0 | 12 | 177 | 7 | 172 | 3.55e-56 | 177 |
MS.gene07529.t1 | MTR_1g068740 | 42.453 | 212 | 111 | 2 | 12 | 222 | 13 | 214 | 1.29e-55 | 177 |
MS.gene07529.t1 | MTR_1g068730 | 42.453 | 212 | 111 | 2 | 12 | 222 | 13 | 214 | 1.42e-55 | 176 |
MS.gene07529.t1 | MTR_8g006970 | 44.811 | 212 | 102 | 3 | 12 | 223 | 20 | 216 | 1.51e-55 | 176 |
MS.gene07529.t1 | MTR_1g115325 | 42.326 | 215 | 107 | 4 | 12 | 222 | 13 | 214 | 1.02e-54 | 174 |
MS.gene07529.t1 | MTR_6g021790 | 44.131 | 213 | 113 | 2 | 12 | 223 | 4 | 211 | 1.07e-54 | 174 |
MS.gene07529.t1 | MTR_7g100020 | 49.697 | 165 | 82 | 1 | 12 | 175 | 13 | 177 | 2.29e-54 | 173 |
MS.gene07529.t1 | MTR_8g006970 | 51.220 | 164 | 80 | 0 | 12 | 175 | 6 | 169 | 2.70e-54 | 172 |
MS.gene07529.t1 | MTR_8g031660 | 49.701 | 167 | 84 | 0 | 10 | 176 | 2 | 168 | 4.43e-54 | 172 |
MS.gene07529.t1 | MTR_2g096550 | 47.059 | 170 | 88 | 2 | 8 | 175 | 9 | 178 | 5.67e-52 | 167 |
MS.gene07529.t1 | MTR_8g031870 | 50.943 | 159 | 78 | 0 | 10 | 168 | 2 | 160 | 6.53e-52 | 166 |
MS.gene07529.t1 | MTR_8g031680 | 41.121 | 214 | 121 | 3 | 10 | 223 | 2 | 210 | 3.97e-50 | 162 |
MS.gene07529.t1 | MTR_4g063160 | 41.121 | 214 | 112 | 4 | 12 | 222 | 13 | 215 | 1.36e-49 | 161 |
MS.gene07529.t1 | MTR_3g064390 | 40.385 | 208 | 105 | 2 | 16 | 223 | 12 | 200 | 1.68e-48 | 158 |
MS.gene07529.t1 | MTR_8g031830 | 49.342 | 152 | 77 | 0 | 13 | 164 | 5 | 156 | 1.90e-47 | 155 |
MS.gene07529.t1 | MTR_5g076590 | 38.942 | 208 | 108 | 3 | 16 | 223 | 12 | 200 | 6.36e-47 | 154 |
MS.gene07529.t1 | MTR_8g093740 | 43.716 | 183 | 100 | 3 | 12 | 192 | 11 | 192 | 2.38e-45 | 150 |
MS.gene07529.t1 | MTR_4g099470 | 41.176 | 187 | 94 | 2 | 37 | 223 | 7 | 177 | 1.92e-44 | 147 |
MS.gene07529.t1 | MTR_1g068730 | 50.769 | 130 | 64 | 0 | 12 | 141 | 13 | 142 | 1.97e-44 | 147 |
MS.gene07529.t1 | MTR_1g094220 | 44.099 | 161 | 89 | 1 | 16 | 175 | 33 | 193 | 2.07e-44 | 147 |
MS.gene07529.t1 | MTR_1g068740 | 50.769 | 130 | 64 | 0 | 12 | 141 | 13 | 142 | 2.43e-44 | 147 |
MS.gene07529.t1 | MTR_1g094220 | 43.275 | 171 | 91 | 2 | 16 | 180 | 33 | 203 | 2.50e-44 | 147 |
MS.gene07529.t1 | MTR_7g103070 | 40.187 | 214 | 113 | 5 | 12 | 223 | 14 | 214 | 4.46e-44 | 147 |
MS.gene07529.t1 | MTR_3g096350 | 45.029 | 171 | 91 | 3 | 12 | 180 | 10 | 179 | 7.79e-44 | 146 |
MS.gene07529.t1 | MTR_1g090717 | 40.183 | 219 | 105 | 5 | 12 | 223 | 13 | 212 | 1.43e-43 | 145 |
MS.gene07529.t1 | MTR_1g029450 | 41.026 | 195 | 103 | 4 | 12 | 195 | 15 | 208 | 2.50e-43 | 145 |
MS.gene07529.t1 | MTR_1g062760 | 41.014 | 217 | 104 | 6 | 12 | 222 | 12 | 210 | 4.09e-43 | 144 |
MS.gene07529.t1 | MTR_1g094220 | 44.872 | 156 | 85 | 1 | 16 | 170 | 33 | 188 | 4.62e-43 | 144 |
MS.gene07529.t1 | MTR_1g094220 | 45.161 | 155 | 84 | 1 | 16 | 169 | 33 | 187 | 1.26e-42 | 144 |
MS.gene07529.t1 | MTR_2g102060 | 41.317 | 167 | 98 | 0 | 16 | 182 | 12 | 178 | 1.39e-42 | 143 |
MS.gene07529.t1 | MTR_5g013900 | 39.490 | 157 | 95 | 0 | 15 | 171 | 10 | 166 | 1.65e-40 | 137 |
MS.gene07529.t1 | MTR_4g098950 | 38.854 | 157 | 96 | 0 | 15 | 171 | 10 | 166 | 2.69e-40 | 137 |
MS.gene07529.t1 | MTR_8g103550 | 40.625 | 160 | 95 | 0 | 16 | 175 | 11 | 170 | 3.20e-40 | 137 |
MS.gene07529.t1 | MTR_3g087160 | 36.313 | 179 | 108 | 1 | 15 | 193 | 10 | 182 | 3.56e-40 | 137 |
MS.gene07529.t1 | MTR_8g090215 | 38.217 | 157 | 97 | 0 | 15 | 171 | 10 | 166 | 1.66e-39 | 135 |
MS.gene07529.t1 | MTR_3g096350 | 44.521 | 146 | 78 | 3 | 12 | 155 | 10 | 154 | 7.89e-37 | 127 |
MS.gene07529.t1 | MTR_3g096350 | 50.413 | 121 | 57 | 3 | 12 | 130 | 10 | 129 | 1.31e-36 | 126 |
MS.gene07529.t1 | MTR_3g064390 | 45.902 | 122 | 66 | 0 | 16 | 137 | 12 | 133 | 2.46e-35 | 123 |
MS.gene07529.t1 | MTR_4g069850 | 36.310 | 168 | 100 | 3 | 14 | 174 | 8 | 175 | 4.57e-33 | 119 |
MS.gene07529.t1 | MTR_8g092020 | 37.725 | 167 | 97 | 2 | 14 | 173 | 12 | 178 | 1.47e-32 | 117 |
MS.gene07529.t1 | MTR_8g093740 | 41.333 | 150 | 86 | 2 | 45 | 192 | 10 | 159 | 6.25e-32 | 115 |
MS.gene07529.t1 | MTR_1g097420 | 37.126 | 167 | 98 | 2 | 14 | 173 | 8 | 174 | 6.46e-32 | 115 |
MS.gene07529.t1 | MTR_4g012940 | 35.928 | 167 | 100 | 3 | 14 | 173 | 8 | 174 | 2.89e-31 | 114 |
MS.gene07529.t1 | MTR_2g101890 | 35.329 | 167 | 101 | 3 | 14 | 173 | 10 | 176 | 3.64e-31 | 114 |
MS.gene07529.t1 | MTR_7g103070 | 38.235 | 170 | 90 | 5 | 56 | 223 | 2 | 158 | 3.38e-30 | 110 |
MS.gene07529.t1 | MTR_6g039490 | 33.014 | 209 | 124 | 5 | 14 | 206 | 8 | 216 | 1.23e-29 | 110 |
MS.gene07529.t1 | MTR_2g005500 | 38.554 | 166 | 62 | 1 | 12 | 177 | 7 | 132 | 9.25e-28 | 103 |
MS.gene07529.t1 | MTR_1g097420 | 34.911 | 169 | 101 | 3 | 12 | 173 | 35 | 201 | 1.23e-26 | 102 |
MS.gene07529.t1 | MTR_8g031810 | 41.346 | 104 | 47 | 1 | 13 | 116 | 5 | 94 | 2.63e-21 | 85.1 |
MS.gene07529.t1 | MTR_3g107717 | 30.114 | 176 | 117 | 5 | 1 | 175 | 1 | 171 | 1.40e-20 | 86.7 |
MS.gene07529.t1 | MTR_3g107713 | 30.114 | 176 | 117 | 5 | 1 | 175 | 1 | 171 | 1.52e-20 | 86.7 |
MS.gene07529.t1 | MTR_3g107707 | 30.114 | 176 | 117 | 5 | 1 | 175 | 1 | 171 | 1.67e-20 | 86.3 |
MS.gene07529.t1 | MTR_1g069245 | 47.368 | 95 | 46 | 2 | 27 | 121 | 109 | 199 | 1.66e-19 | 83.6 |
MS.gene07529.t1 | MTR_1452s0010 | 41.772 | 79 | 46 | 0 | 34 | 112 | 1 | 79 | 1.80e-18 | 77.8 |
MS.gene07529.t1 | MTR_2g090875 | 30.460 | 174 | 107 | 5 | 14 | 175 | 6 | 177 | 3.80e-18 | 79.3 |
MS.gene07529.t1 | MTR_4g088055 | 30.233 | 172 | 106 | 5 | 14 | 173 | 6 | 175 | 4.13e-18 | 79.3 |
MS.gene07529.t1 | MTR_4g073250 | 30.460 | 174 | 107 | 5 | 14 | 175 | 6 | 177 | 5.82e-18 | 79.0 |
MS.gene07529.t1 | MTR_6g087980 | 28.421 | 190 | 122 | 5 | 14 | 191 | 6 | 193 | 3.40e-17 | 77.4 |
MS.gene07529.t1 | MTR_2g078000 | 61.224 | 49 | 19 | 0 | 75 | 123 | 46 | 94 | 5.82e-17 | 73.9 |
MS.gene07529.t1 | MTR_8g075240 | 30.114 | 176 | 105 | 6 | 14 | 175 | 6 | 177 | 7.86e-17 | 75.9 |
MS.gene07529.t1 | MTR_5g022600 | 30.114 | 176 | 105 | 6 | 14 | 175 | 6 | 177 | 1.30e-16 | 75.5 |
MS.gene07529.t1 | MTR_3g078260 | 28.652 | 178 | 113 | 6 | 10 | 175 | 4 | 179 | 6.68e-16 | 73.9 |
MS.gene07529.t1 | MTR_1686s0010 | 37.975 | 79 | 49 | 0 | 34 | 112 | 1 | 79 | 1.66e-15 | 69.7 |
MS.gene07529.t1 | MTR_1g059590 | 32.370 | 173 | 107 | 4 | 10 | 182 | 394 | 556 | 3.80e-15 | 74.3 |
MS.gene07529.t1 | MTR_1g059590 | 32.370 | 173 | 107 | 4 | 10 | 182 | 427 | 589 | 4.52e-15 | 73.9 |
MS.gene07529.t1 | MTR_4g113620 | 27.439 | 164 | 101 | 5 | 15 | 175 | 14 | 162 | 1.24e-14 | 70.5 |
MS.gene07529.t1 | MTR_5g092060 | 24.862 | 181 | 129 | 3 | 4 | 178 | 93 | 272 | 9.60e-14 | 68.9 |
MS.gene07529.t1 | MTR_2g078560 | 47.619 | 63 | 27 | 1 | 76 | 132 | 54 | 116 | 3.33e-13 | 67.8 |
MS.gene07529.t1 | MTR_8g099250 | 60.465 | 43 | 17 | 0 | 12 | 54 | 14 | 56 | 9.71e-11 | 56.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene07529.t1 | AT5G47520 | 85.268 | 224 | 28 | 2 | 1 | 223 | 1 | 220 | 1.51e-138 | 387 |
MS.gene07529.t1 | AT2G43130 | 60.811 | 222 | 79 | 2 | 3 | 224 | 1 | 214 | 2.56e-95 | 277 |
MS.gene07529.t1 | AT2G31680 | 62.443 | 221 | 79 | 1 | 3 | 223 | 1 | 217 | 1.12e-94 | 276 |
MS.gene07529.t1 | AT1G05810 | 61.712 | 222 | 80 | 2 | 2 | 223 | 46 | 262 | 1.70e-93 | 275 |
MS.gene07529.t1 | AT1G05810 | 61.538 | 221 | 80 | 2 | 3 | 223 | 1 | 216 | 2.94e-93 | 272 |
MS.gene07529.t1 | AT3G07410 | 63.470 | 219 | 75 | 2 | 6 | 224 | 4 | 217 | 4.59e-93 | 272 |
MS.gene07529.t1 | AT5G47960 | 58.685 | 213 | 81 | 2 | 12 | 222 | 13 | 220 | 1.01e-86 | 256 |
MS.gene07529.t1 | AT5G65270 | 66.667 | 177 | 59 | 0 | 12 | 188 | 15 | 191 | 2.42e-86 | 255 |
MS.gene07529.t1 | AT1G07410 | 57.547 | 212 | 82 | 3 | 12 | 223 | 10 | 213 | 1.01e-84 | 251 |
MS.gene07529.t1 | AT5G59150 | 57.870 | 216 | 86 | 2 | 8 | 223 | 6 | 216 | 1.50e-84 | 250 |
MS.gene07529.t1 | AT4G39990 | 57.277 | 213 | 85 | 3 | 12 | 223 | 15 | 222 | 1.61e-84 | 250 |
MS.gene07529.t1 | AT3G12160 | 55.399 | 213 | 91 | 1 | 12 | 224 | 13 | 221 | 2.96e-84 | 249 |
MS.gene07529.t1 | AT3G46830 | 57.075 | 212 | 86 | 1 | 12 | 223 | 10 | 216 | 8.84e-83 | 246 |
MS.gene07529.t1 | AT3G46830 | 57.075 | 212 | 86 | 1 | 12 | 223 | 10 | 216 | 8.84e-83 | 246 |
MS.gene07529.t1 | AT1G09630 | 53.812 | 223 | 95 | 3 | 1 | 223 | 1 | 215 | 2.85e-82 | 244 |
MS.gene07529.t1 | AT4G18430 | 55.660 | 212 | 88 | 2 | 12 | 223 | 11 | 216 | 2.34e-81 | 242 |
MS.gene07529.t1 | AT5G60860 | 57.075 | 212 | 85 | 2 | 12 | 223 | 11 | 216 | 4.18e-81 | 241 |
MS.gene07529.t1 | AT1G16920 | 57.547 | 212 | 83 | 3 | 12 | 223 | 11 | 215 | 7.46e-81 | 241 |
MS.gene07529.t1 | AT4G18800 | 55.660 | 212 | 85 | 2 | 12 | 223 | 11 | 213 | 3.41e-80 | 239 |
MS.gene07529.t1 | AT1G28550 | 53.704 | 216 | 95 | 2 | 8 | 223 | 7 | 217 | 5.18e-78 | 234 |
MS.gene07529.t1 | AT3G15060 | 54.930 | 213 | 88 | 3 | 12 | 223 | 11 | 216 | 2.97e-77 | 232 |
MS.gene07529.t1 | AT1G06400 | 54.245 | 212 | 90 | 2 | 12 | 223 | 11 | 215 | 3.24e-77 | 231 |
MS.gene07529.t1 | AT5G45750 | 53.302 | 212 | 92 | 2 | 12 | 223 | 11 | 215 | 1.18e-76 | 230 |
MS.gene07529.t1 | AT2G33870 | 52.778 | 216 | 97 | 2 | 8 | 223 | 7 | 217 | 3.99e-76 | 229 |
MS.gene07529.t1 | AT1G18200 | 52.511 | 219 | 98 | 2 | 12 | 224 | 11 | 229 | 1.05e-75 | 228 |
MS.gene07529.t1 | AT1G73640 | 58.470 | 183 | 75 | 1 | 1 | 183 | 1 | 182 | 4.23e-73 | 222 |
MS.gene07529.t1 | AT1G01200 | 58.427 | 178 | 71 | 2 | 12 | 186 | 26 | 203 | 1.28e-68 | 211 |
MS.gene07529.t1 | AT5G59150 | 54.762 | 168 | 71 | 2 | 56 | 223 | 3 | 165 | 3.62e-59 | 184 |
MS.gene07529.t1 | AT1G02130 | 45.283 | 212 | 101 | 3 | 12 | 223 | 6 | 202 | 1.55e-58 | 184 |
MS.gene07529.t1 | AT3G11730 | 44.601 | 213 | 105 | 3 | 12 | 224 | 6 | 205 | 2.94e-57 | 181 |
MS.gene07529.t1 | AT4G17170 | 43.128 | 211 | 116 | 1 | 13 | 223 | 5 | 211 | 9.53e-56 | 177 |
MS.gene07529.t1 | AT4G35860 | 43.662 | 213 | 114 | 2 | 12 | 223 | 4 | 211 | 2.32e-55 | 176 |
MS.gene07529.t1 | AT5G03520 | 44.601 | 213 | 106 | 3 | 12 | 223 | 13 | 214 | 4.04e-55 | 175 |
MS.gene07529.t1 | AT3G09900 | 43.256 | 215 | 108 | 4 | 12 | 223 | 13 | 216 | 2.69e-54 | 173 |
MS.gene07529.t1 | AT3G46060 | 49.412 | 170 | 85 | 1 | 12 | 180 | 13 | 182 | 5.30e-54 | 172 |
MS.gene07529.t1 | AT3G46060 | 49.412 | 170 | 85 | 1 | 12 | 180 | 13 | 182 | 5.30e-54 | 172 |
MS.gene07529.t1 | AT3G46060 | 49.412 | 170 | 85 | 1 | 12 | 180 | 13 | 182 | 5.30e-54 | 172 |
MS.gene07529.t1 | AT3G53610 | 42.523 | 214 | 108 | 4 | 12 | 222 | 13 | 214 | 5.97e-54 | 172 |
MS.gene07529.t1 | AT3G53610 | 42.523 | 214 | 108 | 4 | 12 | 222 | 13 | 214 | 5.97e-54 | 172 |
MS.gene07529.t1 | AT3G53610 | 42.523 | 214 | 108 | 4 | 12 | 222 | 13 | 214 | 5.97e-54 | 172 |
MS.gene07529.t1 | AT5G59840 | 49.697 | 165 | 82 | 1 | 12 | 175 | 13 | 177 | 8.37e-54 | 172 |
MS.gene07529.t1 | AT4G17160 | 44.762 | 210 | 106 | 3 | 13 | 222 | 5 | 204 | 8.67e-54 | 172 |
MS.gene07529.t1 | AT4G17530 | 43.396 | 212 | 104 | 2 | 12 | 223 | 6 | 201 | 9.52e-54 | 171 |
MS.gene07529.t1 | AT5G47200 | 43.662 | 213 | 102 | 3 | 12 | 223 | 6 | 201 | 1.11e-53 | 171 |
MS.gene07529.t1 | AT4G19640 | 38.942 | 208 | 108 | 3 | 16 | 223 | 12 | 200 | 5.82e-48 | 157 |
MS.gene07529.t1 | AT3G54840 | 45.963 | 161 | 86 | 1 | 16 | 175 | 35 | 195 | 1.00e-45 | 151 |
MS.gene07529.t1 | AT3G54840 | 45.625 | 160 | 86 | 1 | 17 | 175 | 2 | 161 | 1.98e-45 | 149 |
MS.gene07529.t1 | AT3G54840 | 47.097 | 155 | 81 | 1 | 16 | 169 | 35 | 189 | 3.12e-45 | 149 |
MS.gene07529.t1 | AT5G45130 | 42.945 | 163 | 93 | 0 | 16 | 178 | 12 | 174 | 5.65e-45 | 149 |
MS.gene07529.t1 | AT5G45130 | 42.857 | 161 | 92 | 0 | 18 | 178 | 22 | 182 | 1.32e-43 | 145 |
MS.gene07529.t1 | AT5G03530 | 41.014 | 217 | 106 | 7 | 12 | 223 | 11 | 210 | 1.35e-43 | 145 |
MS.gene07529.t1 | AT5G03530 | 41.014 | 217 | 106 | 7 | 12 | 223 | 11 | 210 | 1.35e-43 | 145 |
MS.gene07529.t1 | AT1G43890 | 45.783 | 166 | 87 | 3 | 12 | 175 | 11 | 175 | 1.05e-42 | 144 |
MS.gene07529.t1 | AT1G43890 | 45.783 | 166 | 87 | 3 | 12 | 175 | 11 | 175 | 1.05e-42 | 144 |
MS.gene07529.t1 | AT1G43890 | 45.783 | 166 | 87 | 3 | 12 | 175 | 11 | 175 | 1.05e-42 | 144 |
MS.gene07529.t1 | AT4G39890 | 40.506 | 158 | 93 | 1 | 15 | 171 | 10 | 167 | 4.81e-42 | 142 |
MS.gene07529.t1 | AT5G03520 | 41.477 | 176 | 91 | 3 | 49 | 223 | 40 | 204 | 1.27e-41 | 140 |
MS.gene07529.t1 | AT2G44610 | 39.490 | 157 | 95 | 0 | 15 | 171 | 10 | 166 | 1.15e-40 | 138 |
MS.gene07529.t1 | AT5G10260 | 34.450 | 209 | 125 | 3 | 15 | 223 | 10 | 206 | 1.29e-40 | 138 |
MS.gene07529.t1 | AT4G35860 | 42.169 | 166 | 90 | 2 | 58 | 222 | 4 | 164 | 1.50e-38 | 131 |
MS.gene07529.t1 | AT2G22290 | 36.943 | 157 | 99 | 0 | 15 | 171 | 10 | 166 | 1.24e-37 | 130 |
MS.gene07529.t1 | AT3G09910 | 37.788 | 217 | 107 | 6 | 12 | 223 | 11 | 204 | 2.36e-37 | 129 |
MS.gene07529.t1 | AT3G09910 | 37.788 | 217 | 107 | 6 | 12 | 223 | 11 | 204 | 2.36e-37 | 129 |
MS.gene07529.t1 | AT3G09910 | 37.788 | 217 | 107 | 6 | 12 | 223 | 11 | 204 | 2.36e-37 | 129 |
MS.gene07529.t1 | AT4G19640 | 43.846 | 130 | 73 | 0 | 16 | 145 | 12 | 141 | 5.25e-37 | 127 |
MS.gene07529.t1 | AT4G19640 | 43.511 | 131 | 74 | 0 | 16 | 146 | 12 | 142 | 1.91e-36 | 127 |
MS.gene07529.t1 | AT3G09910 | 39.572 | 187 | 104 | 4 | 12 | 193 | 11 | 193 | 4.29e-36 | 126 |
MS.gene07529.t1 | AT3G09910 | 39.572 | 187 | 104 | 4 | 12 | 193 | 11 | 193 | 4.29e-36 | 126 |
MS.gene07529.t1 | AT1G22740 | 38.323 | 167 | 96 | 2 | 14 | 173 | 8 | 174 | 1.32e-34 | 122 |
MS.gene07529.t1 | AT5G64990 | 35.714 | 154 | 99 | 0 | 15 | 168 | 8 | 161 | 2.38e-33 | 119 |
MS.gene07529.t1 | AT1G52280 | 37.647 | 170 | 99 | 4 | 14 | 176 | 8 | 177 | 3.90e-33 | 119 |
MS.gene07529.t1 | AT3G18820 | 37.500 | 168 | 98 | 4 | 14 | 174 | 8 | 175 | 1.66e-32 | 117 |
MS.gene07529.t1 | AT3G16100 | 37.725 | 167 | 97 | 3 | 14 | 173 | 8 | 174 | 5.93e-32 | 115 |
MS.gene07529.t1 | AT4G09720 | 33.641 | 217 | 118 | 5 | 14 | 223 | 8 | 205 | 8.06e-31 | 113 |
MS.gene07529.t1 | AT2G21880 | 36.970 | 165 | 97 | 4 | 14 | 171 | 9 | 173 | 8.88e-31 | 113 |
MS.gene07529.t1 | AT5G64990 | 34.161 | 161 | 99 | 1 | 15 | 168 | 8 | 168 | 1.20e-30 | 112 |
MS.gene07529.t1 | AT4G09720 | 32.883 | 222 | 118 | 5 | 14 | 223 | 8 | 210 | 7.72e-30 | 110 |
MS.gene07529.t1 | AT5G39620 | 33.945 | 218 | 115 | 7 | 15 | 223 | 6 | 203 | 2.08e-29 | 109 |
MS.gene07529.t1 | AT4G09720 | 32.456 | 228 | 117 | 5 | 14 | 223 | 8 | 216 | 4.81e-29 | 108 |
MS.gene07529.t1 | AT1G49300 | 35.152 | 165 | 100 | 4 | 14 | 171 | 8 | 172 | 5.16e-28 | 105 |
MS.gene07529.t1 | AT1G49300 | 35.152 | 165 | 100 | 4 | 14 | 171 | 8 | 172 | 5.16e-28 | 105 |
MS.gene07529.t1 | AT5G46025 | 47.573 | 103 | 53 | 1 | 76 | 177 | 6 | 108 | 2.95e-25 | 95.9 |
MS.gene07529.t1 | AT2G21880 | 35.135 | 148 | 89 | 4 | 31 | 171 | 1 | 148 | 1.12e-22 | 91.3 |
MS.gene07529.t1 | AT2G21880 | 35.135 | 148 | 89 | 4 | 31 | 171 | 1 | 148 | 1.12e-22 | 91.3 |
MS.gene07529.t1 | AT4G09720 | 33.690 | 187 | 98 | 5 | 44 | 223 | 4 | 171 | 1.38e-22 | 90.5 |
MS.gene07529.t1 | AT4G09720 | 33.690 | 187 | 98 | 5 | 44 | 223 | 4 | 171 | 1.38e-22 | 90.5 |
MS.gene07529.t1 | AT4G09720 | 33.690 | 187 | 98 | 5 | 44 | 223 | 4 | 171 | 1.38e-22 | 90.5 |
MS.gene07529.t1 | AT5G55080 | 28.571 | 175 | 121 | 3 | 1 | 175 | 1 | 171 | 5.80e-22 | 90.5 |
MS.gene07529.t1 | AT2G21880 | 32.121 | 165 | 97 | 5 | 14 | 171 | 9 | 165 | 5.25e-21 | 87.4 |
MS.gene07529.t1 | AT2G44690 | 32.222 | 180 | 108 | 5 | 14 | 181 | 18 | 195 | 1.09e-20 | 86.7 |
MS.gene07529.t1 | AT5G20020 | 31.053 | 190 | 117 | 7 | 1 | 189 | 1 | 177 | 1.18e-20 | 86.7 |
MS.gene07529.t1 | AT5G20010 | 31.053 | 190 | 117 | 7 | 1 | 189 | 1 | 177 | 1.41e-20 | 86.7 |
MS.gene07529.t1 | AT5G55190 | 30.114 | 176 | 117 | 5 | 1 | 175 | 1 | 171 | 1.82e-20 | 86.3 |
MS.gene07529.t1 | AT4G35020 | 31.034 | 174 | 106 | 6 | 14 | 175 | 6 | 177 | 1.87e-17 | 77.8 |
MS.gene07529.t1 | AT4G35020 | 31.034 | 174 | 106 | 6 | 14 | 175 | 6 | 177 | 1.87e-17 | 77.8 |
MS.gene07529.t1 | AT4G35020 | 31.034 | 174 | 106 | 6 | 14 | 175 | 6 | 177 | 1.87e-17 | 77.8 |
MS.gene07529.t1 | AT5G45970 | 30.233 | 172 | 106 | 5 | 14 | 173 | 6 | 175 | 2.59e-17 | 77.4 |
MS.gene07529.t1 | AT4G28950 | 29.050 | 179 | 115 | 5 | 14 | 182 | 6 | 182 | 4.20e-17 | 77.0 |
MS.gene07529.t1 | AT1G20090 | 30.460 | 174 | 107 | 6 | 14 | 175 | 5 | 176 | 5.34e-17 | 76.6 |
MS.gene07529.t1 | AT5G62880 | 29.213 | 178 | 112 | 5 | 14 | 179 | 8 | 183 | 5.57e-17 | 77.0 |
MS.gene07529.t1 | AT1G75840 | 29.885 | 174 | 108 | 6 | 14 | 175 | 6 | 177 | 6.70e-17 | 76.3 |
MS.gene07529.t1 | AT3G48040 | 29.310 | 174 | 109 | 5 | 14 | 175 | 8 | 179 | 1.20e-16 | 75.9 |
MS.gene07529.t1 | AT3G51300 | 30.233 | 172 | 106 | 6 | 16 | 175 | 8 | 177 | 1.77e-16 | 75.1 |
MS.gene07529.t1 | AT4G35950 | 29.310 | 174 | 109 | 6 | 14 | 175 | 6 | 177 | 3.60e-16 | 74.3 |
MS.gene07529.t1 | AT2G17800 | 29.310 | 174 | 109 | 6 | 14 | 175 | 6 | 177 | 5.01e-16 | 73.9 |
MS.gene07529.t1 | AT2G17800 | 29.310 | 174 | 109 | 6 | 14 | 175 | 6 | 177 | 5.01e-16 | 73.9 |
MS.gene07529.t1 | AT3G48040 | 29.299 | 157 | 97 | 5 | 14 | 158 | 8 | 162 | 3.74e-14 | 68.6 |
MS.gene07529.t1 | AT5G62880 | 28.662 | 157 | 98 | 5 | 14 | 158 | 8 | 162 | 2.61e-13 | 66.6 |
MS.gene07529.t1 | AT4G35020 | 32.456 | 114 | 74 | 3 | 16 | 128 | 8 | 119 | 5.75e-12 | 62.0 |
MS.gene07529.t1 | AT4G35020 | 32.456 | 114 | 74 | 3 | 16 | 128 | 8 | 119 | 5.75e-12 | 62.0 |
MS.gene07529.t1 | AT3G22950 | 31.405 | 121 | 77 | 3 | 15 | 134 | 18 | 133 | 4.09e-11 | 60.5 |
MS.gene07529.t1 | AT3G22950 | 31.405 | 121 | 77 | 3 | 15 | 134 | 18 | 133 | 4.09e-11 | 60.5 |
Find 47 sgRNAs with CRISPR-Local
Find 95 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGCACAAGGTTTGTTCTTTA+TGG | 0.121880 | 1.2:+62446930 | MS.gene07529:CDS |
CCTATAGTTGACTTTGAATT+AGG | 0.178199 | 1.2:-62445778 | None:intergenic |
CCGTTACTTCTGCATATTAT+AGG | 0.220427 | 1.2:+62445890 | MS.gene07529:CDS |
CGTTACTTCTGCATATTATA+GGG | 0.294694 | 1.2:+62445891 | MS.gene07529:CDS |
AAAGGGTTGTTGTTCGAAAT+AGG | 0.304511 | 1.2:+62447143 | MS.gene07529:CDS |
GGGTGCAGTTGGAGCACTTC+TGG | 0.313947 | 1.2:+62445912 | MS.gene07529:CDS |
GATGCTTCCTGGATTGAAAA+TGG | 0.318182 | 1.2:+62447066 | MS.gene07529:CDS |
AGGAAGTTAAAGCGCAGATA+TGG | 0.333773 | 1.2:+62445839 | MS.gene07529:CDS |
TCAAGAAAGACGATGCTTCC+TGG | 0.368001 | 1.2:+62447055 | MS.gene07529:CDS |
TGGGAACAAGTCAGATCTTA+AGG | 0.381456 | 1.2:+62446864 | MS.gene07529:CDS |
CCTAATTCAAAGTCAACTAT+AGG | 0.411802 | 1.2:+62445778 | MS.gene07529:CDS |
CTTGAGACATCATAACCTTC+CGG | 0.418307 | 1.2:-62447029 | None:intergenic |
AACGTTGTCACAATACTTGT+TGG | 0.431302 | 1.2:+62446844 | MS.gene07529:CDS |
CGCAGATATGGGACACAGCT+GGG | 0.471236 | 1.2:+62445851 | MS.gene07529:CDS |
GCGCAGATATGGGACACAGC+TGG | 0.472726 | 1.2:+62445850 | MS.gene07529:CDS |
GGAAGTTAAAGCGCAGATAT+GGG | 0.487077 | 1.2:+62445840 | MS.gene07529:CDS |
ACGTTGTCACAATACTTGTT+GGG | 0.487177 | 1.2:+62446845 | MS.gene07529:CDS |
ATTTACTCGCAAGATTTGCC+AGG | 0.491537 | 1.2:+62445743 | MS.gene07529:CDS |
TAATTGGTGATTCAGCTGTT+GGG | 0.495291 | 1.2:+62445713 | MS.gene07529:CDS |
GCATATTATAGGGGTGCAGT+TGG | 0.498462 | 1.2:+62445901 | MS.gene07529:CDS |
TTCTGGTATATGACATCAGC+AGG | 0.502132 | 1.2:+62445929 | MS.gene07529:CDS |
TTAATTGGTGATTCAGCTGT+TGG | 0.515554 | 1.2:+62445712 | MS.gene07529:CDS |
CGTCAAACGTTTGATAGCAT+TGG | 0.518334 | 1.2:+62445952 | MS.gene07529:CDS |
GAAGGGGATCGATCAGCAGA+AGG | 0.552374 | 1.2:+62447111 | MS.gene07529:CDS |
ACTGTTGTTCTACAACAAGA+AGG | 0.557959 | 1.2:+62447093 | MS.gene07529:CDS |
ATTAGGATAAAATTCATCCC+TGG | 0.561389 | 1.2:-62445761 | None:intergenic |
CGTTTGATAGCATTGGTCGA+TGG | 0.567811 | 1.2:+62445959 | MS.gene07529:CDS |
CTGTTGTTCTACAACAAGAA+GGG | 0.571816 | 1.2:+62447094 | MS.gene07529:CDS |
GGGACACAGCTGGGCAAGAG+AGG | 0.572066 | 1.2:+62445860 | MS.gene07529:CDS |
AAATCTACAACATATTAAGC+CGG | 0.576659 | 1.2:+62447010 | MS.gene07529:CDS |
AGGGGATCGATCAGCAGAAG+GGG | 0.577182 | 1.2:+62447113 | MS.gene07529:CDS |
AAAGCCTTGCCTTCCGTCGT+AGG | 0.577715 | 1.2:-62446901 | None:intergenic |
GTCAGATCTTAAGGATGCGA+GGG | 0.590058 | 1.2:+62446873 | MS.gene07529:CDS |
AAGGGGATCGATCAGCAGAA+GGG | 0.592624 | 1.2:+62447112 | MS.gene07529:CDS |
GTTACTTCTGCATATTATAG+GGG | 0.598910 | 1.2:+62445892 | MS.gene07529:CDS |
AGGGAGGTACCTACGACGGA+AGG | 0.599263 | 1.2:+62446892 | MS.gene07529:CDS |
GGTACCTACGACGGAAGGCA+AGG | 0.609174 | 1.2:+62446897 | MS.gene07529:CDS |
TAATGAAGAAGAGAAGACAG+AGG | 0.611987 | 1.2:+62445669 | MS.gene07529:CDS |
TGTTGTTCTACAACAAGAAG+GGG | 0.621100 | 1.2:+62447095 | MS.gene07529:CDS |
CCTATAATATGCAGAAGTAA+CGG | 0.621105 | 1.2:-62445890 | None:intergenic |
CTACAACATATTAAGCCGGA+AGG | 0.622382 | 1.2:+62447014 | MS.gene07529:CDS |
TTTACTCGCAAGATTTGCCA+GGG | 0.623585 | 1.2:+62445744 | MS.gene07529:CDS |
AAGGCTTTAGCTGAGGCACA+AGG | 0.626187 | 1.2:+62446916 | MS.gene07529:CDS |
AGTCAGATCTTAAGGATGCG+AGG | 0.626993 | 1.2:+62446872 | MS.gene07529:CDS |
AGATCTTAAGGATGCGAGGG+AGG | 0.630674 | 1.2:+62446876 | MS.gene07529:CDS |
GGAAGGCAAGGCTTTAGCTG+AGG | 0.683534 | 1.2:+62446909 | MS.gene07529:CDS |
TGCGAGGGAGGTACCTACGA+CGG | 0.720020 | 1.2:+62446888 | MS.gene07529:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAAAAAAACGTATA+TGG | - | chr1.2:62446463-62446482 | None:intergenic | 10.0% |
!! | AATTATTTGTATATACTTTA+GGG | + | chr1.2:62446523-62446542 | MS.gene07529:intron | 10.0% |
!! | TAATTATTTGTATATACTTT+AGG | + | chr1.2:62446522-62446541 | MS.gene07529:intron | 10.0% |
!!! | TTTTTTTTTTTTTTAAGAAG+GGG | + | chr1.2:62446478-62446497 | MS.gene07529:intron | 10.0% |
!! | AAAACTTAATTCACATATAT+TGG | + | chr1.2:62446753-62446772 | MS.gene07529:intron | 15.0% |
!! | ATCAAAGCAAAAAAAAAAAA+AGG | - | chr1.2:62446730-62446749 | None:intergenic | 15.0% |
!! | ACAATAAAACTTTACATTGT+TGG | - | chr1.2:62446616-62446635 | None:intergenic | 20.0% |
!! | ACTCAAAAAATGGAAATTAA+CGG | + | chr1.2:62445814-62445833 | MS.gene07529:CDS | 20.0% |
!! | AGTCTAAGTATATGAAAATA+TGG | - | chr1.2:62446427-62446446 | None:intergenic | 20.0% |
!! | ATATACTTAGACTAAAATGA+GGG | + | chr1.2:62446434-62446453 | MS.gene07529:intron | 20.0% |
!!! | AAAAACTTTAGAAACTAAGT+TGG | - | chr1.2:62446326-62446345 | None:intergenic | 20.0% |
!!! | AAACTTTAGAGATTAAATTG+AGG | - | chr1.2:62446291-62446310 | None:intergenic | 20.0% |
!!! | AACTTTAGAGATTAAATTGA+GGG | - | chr1.2:62446290-62446309 | None:intergenic | 20.0% |
!!! | CAATTAAGACAATTTTGAAA+AGG | - | chr1.2:62445699-62445718 | None:intergenic | 20.0% |
!!! | CTTTTCAAAATTGTCTTAAT+TGG | + | chr1.2:62445697-62445716 | MS.gene07529:CDS | 20.0% |
!!! | TAAGCAATATTTGAAGTATA+TGG | + | chr1.2:62446354-62446373 | MS.gene07529:intron | 20.0% |
!!! | TAATTTCCATTTTTTGAGTT+TGG | - | chr1.2:62445813-62445832 | None:intergenic | 20.0% |
! | AAAAATGGAAATTAACGGAA+AGG | + | chr1.2:62445819-62445838 | MS.gene07529:CDS | 25.0% |
! | AAATCTACAACATATTAAGC+CGG | + | chr1.2:62447010-62447029 | MS.gene07529:CDS | 25.0% |
! | ACTATGTTTGAATCTTTCTT+TGG | + | chr1.2:62446010-62446029 | MS.gene07529:intron | 25.0% |
! | ACTTAATTCACATATATTGG+TGG | + | chr1.2:62446756-62446775 | MS.gene07529:intron | 25.0% |
! | CATATACTTAGACTAAAATG+AGG | + | chr1.2:62446433-62446452 | MS.gene07529:intron | 25.0% |
! | TTTCTCAATAAACTTGACAT+TGG | + | chr1.2:62446090-62446109 | MS.gene07529:intron | 25.0% |
!! | AAAATTAATGTCCCTTTTTG+GGG | + | chr1.2:62446141-62446160 | MS.gene07529:intron | 25.0% |
!! | GAAAATTAATGTCCCTTTTT+GGG | + | chr1.2:62446140-62446159 | MS.gene07529:intron | 25.0% |
!! | TGAAAATTAATGTCCCTTTT+TGG | + | chr1.2:62446139-62446158 | MS.gene07529:intron | 25.0% |
!!! | TATATGCTTTTAAGATGCTA+GGG | + | chr1.2:62446392-62446411 | MS.gene07529:intron | 25.0% |
!!! | TTGTTCTTTCTATGTTTTTG+AGG | + | chr1.2:62446046-62446065 | MS.gene07529:intron | 25.0% |
AGAGTTCCAAACTCAAAAAA+TGG | + | chr1.2:62445804-62445823 | MS.gene07529:CDS | 30.0% | |
AGTGATACTTAAAAGGCTAA+TGG | + | chr1.2:62446560-62446579 | MS.gene07529:intron | 30.0% | |
ATTAGGATAAAATTCATCCC+TGG | - | chr1.2:62445764-62445783 | None:intergenic | 30.0% | |
CATACCATACAAGTACTATA+AGG | - | chr1.2:62446179-62446198 | None:intergenic | 30.0% | |
CATTAAACTTTCCCCAAAAA+GGG | - | chr1.2:62446155-62446174 | None:intergenic | 30.0% | |
CCTAATTCAAAGTCAACTAT+AGG | + | chr1.2:62445778-62445797 | MS.gene07529:CDS | 30.0% | |
CCTATAATATGCAGAAGTAA+CGG | - | chr1.2:62445893-62445912 | None:intergenic | 30.0% | |
CGTTACTTCTGCATATTATA+GGG | + | chr1.2:62445891-62445910 | MS.gene07529:CDS | 30.0% | |
GAAATGATGATTAAGTGTAC+TGG | + | chr1.2:62446792-62446811 | MS.gene07529:intron | 30.0% | |
GTTACTTCTGCATATTATAG+GGG | + | chr1.2:62445892-62445911 | MS.gene07529:CDS | 30.0% | |
TACAAAATAAAATCGCCTCA+AGG | - | chr1.2:62446235-62446254 | None:intergenic | 30.0% | |
TACATGTACACACATATTGA+TGG | + | chr1.2:62446695-62446714 | MS.gene07529:intron | 30.0% | |
TGAAGAGAGTGATACTTAAA+AGG | + | chr1.2:62446553-62446572 | MS.gene07529:intron | 30.0% | |
! | CCTATAGTTGACTTTGAATT+AGG | - | chr1.2:62445781-62445800 | None:intergenic | 30.0% |
!!! | GTATATGCTTTTAAGATGCT+AGG | + | chr1.2:62446391-62446410 | MS.gene07529:intron | 30.0% |
!!! | TGTTTTTGAGGTAAATGATC+AGG | + | chr1.2:62446058-62446077 | MS.gene07529:intron | 30.0% |
AACGTTGTCACAATACTTGT+TGG | + | chr1.2:62446844-62446863 | MS.gene07529:CDS | 35.0% | |
ACGTTGTCACAATACTTGTT+GGG | + | chr1.2:62446845-62446864 | MS.gene07529:CDS | 35.0% | |
ACTGTTGTTCTACAACAAGA+AGG | + | chr1.2:62447093-62447112 | MS.gene07529:CDS | 35.0% | |
ATGTCGAAGAATAACAAGAC+TGG | - | chr1.2:62446676-62446695 | None:intergenic | 35.0% | |
CCATTAAACTTTCCCCAAAA+AGG | - | chr1.2:62446156-62446175 | None:intergenic | 35.0% | |
CCGTTACTTCTGCATATTAT+AGG | + | chr1.2:62445890-62445909 | MS.gene07529:CDS | 35.0% | |
CTGTTGTTCTACAACAAGAA+GGG | + | chr1.2:62447094-62447113 | MS.gene07529:CDS | 35.0% | |
TAATGAAGAAGAGAAGACAG+AGG | + | chr1.2:62445669-62445688 | MS.gene07529:CDS | 35.0% | |
TGTTGTTCTACAACAAGAAG+GGG | + | chr1.2:62447095-62447114 | MS.gene07529:CDS | 35.0% | |
! | AGTCTTTCCATTTTCAATCC+AGG | - | chr1.2:62447076-62447095 | None:intergenic | 35.0% |
! | GGCTAATGGTGTACTATTTT+AGG | + | chr1.2:62446574-62446593 | MS.gene07529:intron | 35.0% |
! | TAATTGGTGATTCAGCTGTT+GGG | + | chr1.2:62445713-62445732 | MS.gene07529:CDS | 35.0% |
! | TTAATTGGTGATTCAGCTGT+TGG | + | chr1.2:62445712-62445731 | MS.gene07529:CDS | 35.0% |
!! | ATGGCCTTATAGTACTTGTA+TGG | + | chr1.2:62446172-62446191 | MS.gene07529:intron | 35.0% |
!! | CCTTTTTGGGGAAAGTTTAA+TGG | + | chr1.2:62446153-62446172 | MS.gene07529:intron | 35.0% |
AGGAAGTTAAAGCGCAGATA+TGG | + | chr1.2:62445839-62445858 | MS.gene07529:CDS | 40.0% | |
ATTTACTCGCAAGATTTGCC+AGG | + | chr1.2:62445743-62445762 | MS.gene07529:CDS | 40.0% | |
CCTCAAGGAAAAGAATGAAG+AGG | - | chr1.2:62446220-62446239 | None:intergenic | 40.0% | |
CTACAACATATTAAGCCGGA+AGG | + | chr1.2:62447014-62447033 | MS.gene07529:CDS | 40.0% | |
CTTGAGACATCATAACCTTC+CGG | - | chr1.2:62447032-62447051 | None:intergenic | 40.0% | |
GATGCTTCCTGGATTGAAAA+TGG | + | chr1.2:62447066-62447085 | MS.gene07529:CDS | 40.0% | |
GGAAGTTAAAGCGCAGATAT+GGG | + | chr1.2:62445840-62445859 | MS.gene07529:CDS | 40.0% | |
TGGGAACAAGTCAGATCTTA+AGG | + | chr1.2:62446864-62446883 | MS.gene07529:CDS | 40.0% | |
TTCTGGTATATGACATCAGC+AGG | + | chr1.2:62445929-62445948 | MS.gene07529:CDS | 40.0% | |
TTTACTCGCAAGATTTGCCA+GGG | + | chr1.2:62445744-62445763 | MS.gene07529:CDS | 40.0% | |
! | CCTCTTCATTCTTTTCCTTG+AGG | + | chr1.2:62446217-62446236 | MS.gene07529:intron | 40.0% |
! | CGTCAAACGTTTGATAGCAT+TGG | + | chr1.2:62445952-62445971 | MS.gene07529:CDS | 40.0% |
! | GGCACAAGGTTTGTTCTTTA+TGG | + | chr1.2:62446930-62446949 | MS.gene07529:CDS | 40.0% |
AGCAGAAGGGGAGACAAAAA+AGG | + | chr1.2:62447125-62447144 | MS.gene07529:CDS | 45.0% | |
AGTCAGATCTTAAGGATGCG+AGG | + | chr1.2:62446872-62446891 | MS.gene07529:CDS | 45.0% | |
GCAGAAGGGGAGACAAAAAA+GGG | + | chr1.2:62447126-62447145 | MS.gene07529:CDS | 45.0% | |
GTCAGATCTTAAGGATGCGA+GGG | + | chr1.2:62446873-62446892 | MS.gene07529:CDS | 45.0% | |
TCAAGAAAGACGATGCTTCC+TGG | + | chr1.2:62447055-62447074 | MS.gene07529:CDS | 45.0% | |
! | GCATATTATAGGGGTGCAGT+TGG | + | chr1.2:62445901-62445920 | MS.gene07529:CDS | 45.0% |
!! | CGTTTGATAGCATTGGTCGA+TGG | + | chr1.2:62445959-62445978 | MS.gene07529:CDS | 45.0% |
!!! | TTTTTTTTTTTTTTTAAGAA+GGG | + | chr1.2:62446477-62446496 | MS.gene07529:intron | 5.0% |
!!! | TTTTTTTTTTTTTTTTAAGA+AGG | + | chr1.2:62446476-62446495 | MS.gene07529:intron | 5.0% |
AAGGGGATCGATCAGCAGAA+GGG | + | chr1.2:62447112-62447131 | MS.gene07529:CDS | 50.0% | |
AGATCTTAAGGATGCGAGGG+AGG | + | chr1.2:62446876-62446895 | MS.gene07529:CDS | 50.0% | |
! | AAGGCTTTAGCTGAGGCACA+AGG | + | chr1.2:62446916-62446935 | MS.gene07529:CDS | 50.0% |
AAAGCCTTGCCTTCCGTCGT+AGG | - | chr1.2:62446904-62446923 | None:intergenic | 55.0% | |
AGGGGATCGATCAGCAGAAG+GGG | + | chr1.2:62447113-62447132 | MS.gene07529:CDS | 55.0% | |
CGCAGATATGGGACACAGCT+GGG | + | chr1.2:62445851-62445870 | MS.gene07529:CDS | 55.0% | |
GAAGGGGATCGATCAGCAGA+AGG | + | chr1.2:62447111-62447130 | MS.gene07529:CDS | 55.0% | |
! | GGAAGGCAAGGCTTTAGCTG+AGG | + | chr1.2:62446909-62446928 | MS.gene07529:CDS | 55.0% |
GCGCAGATATGGGACACAGC+TGG | + | chr1.2:62445850-62445869 | MS.gene07529:CDS | 60.0% | |
GGTACCTACGACGGAAGGCA+AGG | + | chr1.2:62446897-62446916 | MS.gene07529:CDS | 60.0% | |
! | GGGTGCAGTTGGAGCACTTC+TGG | + | chr1.2:62445912-62445931 | MS.gene07529:CDS | 60.0% |
!! | AGGGAGGTACCTACGACGGA+AGG | + | chr1.2:62446892-62446911 | MS.gene07529:CDS | 60.0% |
!! | TGCGAGGGAGGTACCTACGA+CGG | + | chr1.2:62446888-62446907 | MS.gene07529:CDS | 60.0% |
GGGACACAGCTGGGCAAGAG+AGG | + | chr1.2:62445860-62445879 | MS.gene07529:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 62445658 | 62447164 | 62445658 | ID=MS.gene07529 |
chr1.2 | mRNA | 62445658 | 62447164 | 62445658 | ID=MS.gene07529.t1;Parent=MS.gene07529 |
chr1.2 | exon | 62445658 | 62445997 | 62445658 | ID=MS.gene07529.t1.exon1;Parent=MS.gene07529.t1 |
chr1.2 | CDS | 62445658 | 62445997 | 62445658 | ID=cds.MS.gene07529.t1;Parent=MS.gene07529.t1 |
chr1.2 | exon | 62446830 | 62447164 | 62446830 | ID=MS.gene07529.t1.exon2;Parent=MS.gene07529.t1 |
chr1.2 | CDS | 62446830 | 62447164 | 62446830 | ID=cds.MS.gene07529.t1;Parent=MS.gene07529.t1 |
Gene Sequence |
Protein sequence |