AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene84694

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84694.t1 MTR_3g086980 99.083 218 2 0 52 269 5 222 4.95e-162 448
MS.gene84694.t1 MTR_8g089985 89.954 219 21 1 52 269 6 224 3.72e-148 413
MS.gene84694.t1 MTR_1g052475 72.727 220 58 2 51 268 3 222 3.79e-114 327
MS.gene84694.t1 MTR_0262s0050 71.889 217 61 0 51 267 3 219 2.45e-112 323
MS.gene84694.t1 MTR_8g027220 64.977 217 68 2 55 267 18 230 1.52e-94 278
MS.gene84694.t1 MTR_4g064897 62.736 212 75 1 57 268 6 213 6.01e-93 273
MS.gene84694.t1 MTR_2g005510 60.849 212 79 2 58 268 10 218 3.34e-90 266
MS.gene84694.t1 MTR_3g069510 62.319 207 76 1 61 267 10 214 1.81e-89 265
MS.gene84694.t1 MTR_2g075950 58.879 214 85 3 56 269 6 216 7.48e-88 260
MS.gene84694.t1 MTR_8g036220 56.109 221 91 3 54 268 6 226 1.85e-87 260
MS.gene84694.t1 MTR_2g083860 64.444 180 64 0 56 235 6 185 6.73e-86 255
MS.gene84694.t1 MTR_2g014990 57.209 215 85 3 56 268 6 215 8.09e-85 253
MS.gene84694.t1 MTR_4g088090 55.093 216 90 2 56 269 6 216 3.85e-84 251
MS.gene84694.t1 MTR_2g090865 55.349 215 92 1 54 268 2 212 8.45e-84 250
MS.gene84694.t1 MTR_1g078200 57.346 211 87 1 61 268 12 222 1.61e-83 249
MS.gene84694.t1 MTR_4g079350 55.093 216 90 2 56 269 6 216 1.90e-83 249
MS.gene84694.t1 MTR_7g405790 55.450 211 85 2 62 268 14 219 1.41e-80 242
MS.gene84694.t1 MTR_7g051940 55.769 208 86 2 62 268 12 214 1.11e-77 234
MS.gene84694.t1 MTR_7g117910 58.454 207 67 3 58 263 15 203 2.31e-77 233
MS.gene84694.t1 MTR_6g079550 51.415 212 100 1 57 268 6 214 8.51e-73 222
MS.gene84694.t1 MTR_8g107070 51.905 210 100 1 57 266 8 216 1.88e-69 215
MS.gene84694.t1 MTR_2g027660 45.685 197 102 2 62 258 5 196 2.75e-58 185
MS.gene84694.t1 MTR_6g021790 50.909 165 81 0 61 225 4 168 7.38e-58 184
MS.gene84694.t1 MTR_8g031870 52.866 157 74 0 62 218 5 161 7.93e-57 181
MS.gene84694.t1 MTR_8g031660 50.000 164 82 0 62 225 5 168 1.05e-56 181
MS.gene84694.t1 MTR_8g006970 44.712 208 103 2 61 268 20 215 1.49e-56 181
MS.gene84694.t1 MTR_8g006970 51.190 168 82 0 57 224 2 169 6.09e-56 178
MS.gene84694.t1 MTR_7g081700 42.925 212 108 2 57 268 2 200 2.04e-55 177
MS.gene84694.t1 MTR_2g005500 42.254 213 111 2 56 268 2 202 1.15e-54 175
MS.gene84694.t1 MTR_8g031680 47.222 180 94 1 62 240 5 184 2.30e-53 172
MS.gene84694.t1 MTR_1g115325 41.627 209 114 3 61 268 13 214 8.44e-53 171
MS.gene84694.t1 MTR_1g068740 46.471 170 90 1 56 224 8 177 2.04e-52 170
MS.gene84694.t1 MTR_7g100020 47.273 165 86 1 61 224 13 177 5.71e-52 169
MS.gene84694.t1 MTR_1g068730 45.882 170 91 1 56 224 8 177 6.30e-52 169
MS.gene84694.t1 MTR_8g031830 50.980 153 75 0 62 214 5 157 7.32e-51 166
MS.gene84694.t1 MTR_4g063160 40.758 211 114 4 61 268 13 215 6.09e-50 164
MS.gene84694.t1 MTR_1g094220 46.512 172 88 2 51 221 22 190 5.33e-48 158
MS.gene84694.t1 MTR_1g094220 45.902 183 89 4 51 227 22 200 5.93e-48 158
MS.gene84694.t1 MTR_1g094220 47.619 168 84 2 51 217 22 186 6.14e-48 158
MS.gene84694.t1 MTR_1g094220 46.629 178 90 3 51 227 22 195 1.59e-47 158
MS.gene84694.t1 MTR_2g096550 43.976 166 91 2 61 224 13 178 4.84e-47 156
MS.gene84694.t1 MTR_3g064390 46.154 156 84 0 65 220 12 167 1.07e-46 155
MS.gene84694.t1 MTR_5g076590 40.686 204 105 4 65 268 12 199 3.45e-45 151
MS.gene84694.t1 MTR_4g099470 42.286 175 88 2 94 268 15 176 1.02e-44 149
MS.gene84694.t1 MTR_8g103550 37.255 204 111 2 65 268 11 197 1.64e-44 149
MS.gene84694.t1 MTR_8g093740 37.674 215 120 5 56 268 6 208 1.64e-44 149
MS.gene84694.t1 MTR_1g068740 48.889 135 68 1 56 189 8 142 8.94e-44 147
MS.gene84694.t1 MTR_1g068730 48.855 131 67 0 56 186 8 138 1.72e-43 145
MS.gene84694.t1 MTR_3g096350 37.089 213 120 5 58 268 7 207 1.86e-42 144
MS.gene84694.t1 MTR_1g029450 36.792 212 121 5 59 268 13 213 2.33e-42 144
MS.gene84694.t1 MTR_2g102060 41.667 156 91 0 65 220 12 167 2.57e-42 144
MS.gene84694.t1 MTR_8g090215 36.000 175 107 1 64 233 10 184 4.10e-41 140
MS.gene84694.t1 MTR_3g087160 37.267 161 101 0 64 224 10 170 4.39e-41 140
MS.gene84694.t1 MTR_5g013900 38.217 157 97 0 64 220 10 166 9.58e-41 140
MS.gene84694.t1 MTR_7g103070 44.654 159 86 2 61 217 14 172 2.84e-40 139
MS.gene84694.t1 MTR_4g098950 36.306 157 100 0 64 220 10 166 2.07e-39 136
MS.gene84694.t1 MTR_1g090717 41.714 175 99 3 56 227 8 182 7.15e-39 135
MS.gene84694.t1 MTR_1g062760 41.420 169 96 3 61 227 12 179 2.49e-38 134
MS.gene84694.t1 MTR_3g064390 46.400 125 67 0 65 189 12 136 1.61e-36 127
MS.gene84694.t1 MTR_4g069850 35.714 196 117 4 63 249 8 203 2.84e-33 120
MS.gene84694.t1 MTR_8g092020 37.576 165 96 3 63 220 12 176 7.36e-33 119
MS.gene84694.t1 MTR_1g097420 38.788 165 94 3 63 220 8 172 8.93e-33 119
MS.gene84694.t1 MTR_3g096350 40.714 140 77 4 58 195 7 142 1.58e-32 117
MS.gene84694.t1 MTR_3g096350 44.355 124 66 3 58 179 7 129 6.68e-32 115
MS.gene84694.t1 MTR_2g101890 37.576 165 96 3 63 220 10 174 3.79e-31 115
MS.gene84694.t1 MTR_4g012940 37.576 165 96 3 63 220 8 172 5.06e-31 114
MS.gene84694.t1 MTR_6g039490 38.182 165 95 4 63 220 8 172 1.01e-30 114
MS.gene84694.t1 MTR_8g093740 34.356 163 96 3 94 245 10 172 5.52e-30 111
MS.gene84694.t1 MTR_1g097420 36.527 167 97 4 61 220 35 199 4.37e-28 107
MS.gene84694.t1 MTR_2g005500 31.455 213 94 3 56 268 2 162 4.88e-26 100
MS.gene84694.t1 MTR_7g103070 41.463 123 70 2 105 225 2 124 5.99e-26 100
MS.gene84694.t1 MTR_8g031810 44.231 104 44 1 62 165 5 94 4.88e-23 90.5
MS.gene84694.t1 MTR_3g107713 27.830 212 136 5 58 266 7 204 7.47e-22 91.3
MS.gene84694.t1 MTR_3g107707 28.502 207 131 5 58 261 7 199 8.03e-22 90.9
MS.gene84694.t1 MTR_3g107717 28.641 206 130 5 58 260 7 198 3.87e-21 89.4
MS.gene84694.t1 MTR_1g069245 45.833 96 48 2 75 170 108 199 1.59e-20 87.4
MS.gene84694.t1 MTR_2g090875 32.727 165 97 5 65 217 8 170 1.36e-19 84.3
MS.gene84694.t1 MTR_2g078000 65.306 49 17 0 124 172 46 94 3.02e-19 80.9
MS.gene84694.t1 MTR_4g088055 35.537 121 75 3 65 184 8 126 9.62e-19 82.0
MS.gene84694.t1 MTR_6g087980 28.342 187 120 5 65 239 8 192 1.70e-18 81.6
MS.gene84694.t1 MTR_1452s0010 46.835 79 42 0 83 161 1 79 1.98e-18 79.0
MS.gene84694.t1 MTR_3g078260 27.861 201 131 5 65 253 10 208 2.56e-18 81.3
MS.gene84694.t1 MTR_4g073250 35.294 119 74 3 65 182 8 124 2.13e-17 78.6
MS.gene84694.t1 MTR_8g075240 33.884 121 77 3 65 184 8 126 1.00e-16 76.6
MS.gene84694.t1 MTR_5g022600 33.884 121 77 3 65 184 8 126 3.48e-16 75.1
MS.gene84694.t1 MTR_3g078260 34.211 114 72 3 65 177 10 121 4.77e-15 70.9
MS.gene84694.t1 MTR_4g113620 26.291 213 131 7 58 267 7 196 6.18e-15 72.0
MS.gene84694.t1 MTR_1686s0010 38.043 92 57 0 83 174 1 92 8.35e-15 68.6
MS.gene84694.t1 MTR_2g078560 48.485 66 28 1 123 182 52 117 1.35e-14 72.8
MS.gene84694.t1 MTR_1g059590 30.818 159 103 3 66 224 398 549 5.31e-14 72.0
MS.gene84694.t1 MTR_1g059590 30.818 159 103 3 66 224 431 582 5.98e-14 71.6
MS.gene84694.t1 MTR_3g053480 54.717 53 24 0 57 109 10 62 6.20e-14 65.5
MS.gene84694.t1 MTR_8g099250 56.863 51 22 0 57 107 10 60 1.75e-13 64.3
MS.gene84694.t1 MTR_5g092060 26.486 185 122 6 51 227 94 272 2.76e-13 68.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene84694.t1 AT5G65270 85.845 219 29 2 52 268 6 224 8.49e-136 382
MS.gene84694.t1 AT4G39990 80.095 211 39 2 59 268 13 221 7.78e-124 352
MS.gene84694.t1 AT3G12160 75.229 218 53 1 51 268 3 219 1.12e-121 346
MS.gene84694.t1 AT5G47960 74.057 212 54 1 57 267 9 220 3.35e-113 325
MS.gene84694.t1 AT1G09630 59.716 211 83 1 57 267 6 214 1.90e-92 272
MS.gene84694.t1 AT1G07410 60.849 212 78 1 57 268 6 212 1.21e-91 270
MS.gene84694.t1 AT4G18800 60.563 213 78 2 56 268 6 212 1.19e-89 265
MS.gene84694.t1 AT1G16920 61.058 208 77 2 61 268 11 214 1.05e-88 263
MS.gene84694.t1 AT5G45750 60.094 213 81 2 56 268 6 214 2.23e-87 259
MS.gene84694.t1 AT3G46830 68.571 175 55 0 57 231 6 180 3.17e-87 259
MS.gene84694.t1 AT3G46830 68.571 175 55 0 57 231 6 180 3.17e-87 259
MS.gene84694.t1 AT4G18430 56.279 215 87 2 56 268 6 215 5.13e-87 258
MS.gene84694.t1 AT5G59150 68.966 174 54 0 58 231 7 180 2.19e-86 257
MS.gene84694.t1 AT2G33870 57.209 215 86 2 56 268 6 216 3.11e-86 256
MS.gene84694.t1 AT5G47520 57.604 217 90 2 53 268 4 219 5.31e-86 256
MS.gene84694.t1 AT1G28550 58.140 215 84 2 56 268 6 216 1.94e-85 254
MS.gene84694.t1 AT5G60860 57.209 215 85 3 56 268 6 215 1.43e-84 252
MS.gene84694.t1 AT1G01200 59.908 217 76 5 58 267 23 235 2.14e-84 252
MS.gene84694.t1 AT1G06400 57.209 215 86 2 56 269 6 215 6.45e-84 250
MS.gene84694.t1 AT3G15060 56.279 215 87 3 56 268 6 215 2.19e-83 249
MS.gene84694.t1 AT1G05810 61.538 182 70 0 55 236 4 185 1.32e-80 242
MS.gene84694.t1 AT1G05810 61.202 183 71 0 54 236 49 231 2.42e-80 243
MS.gene84694.t1 AT2G43130 54.327 208 90 1 61 268 10 212 4.78e-79 238
MS.gene84694.t1 AT2G31680 60.795 176 69 0 61 236 10 185 1.77e-78 237
MS.gene84694.t1 AT3G07410 62.500 176 66 0 61 236 10 185 4.56e-77 233
MS.gene84694.t1 AT1G73640 50.893 224 97 4 58 268 8 231 9.87e-73 223
MS.gene84694.t1 AT1G18200 51.220 205 96 2 57 261 7 207 2.87e-72 221
MS.gene84694.t1 AT5G59150 69.600 125 38 0 107 231 5 129 4.40e-60 188
MS.gene84694.t1 AT1G02130 45.755 212 103 3 57 268 2 201 1.04e-58 186
MS.gene84694.t1 AT4G17170 45.685 197 102 2 62 258 5 196 1.25e-58 186
MS.gene84694.t1 AT4G17160 43.868 212 102 3 62 268 5 204 7.63e-58 184
MS.gene84694.t1 AT4G35860 50.303 165 82 0 61 225 4 168 2.21e-57 182
MS.gene84694.t1 AT5G47200 44.340 212 105 2 57 268 2 200 1.05e-55 178
MS.gene84694.t1 AT4G17530 44.340 212 105 2 57 268 2 200 1.24e-55 178
MS.gene84694.t1 AT3G11730 44.976 209 103 5 61 268 6 203 1.74e-54 175
MS.gene84694.t1 AT5G59840 41.148 209 115 3 61 268 13 214 9.72e-53 171
MS.gene84694.t1 AT3G46060 41.148 209 115 3 61 268 13 214 1.06e-52 171
MS.gene84694.t1 AT3G46060 41.148 209 115 3 61 268 13 214 1.06e-52 171
MS.gene84694.t1 AT3G46060 41.148 209 115 3 61 268 13 214 1.06e-52 171
MS.gene84694.t1 AT5G03520 40.654 214 118 3 56 268 8 213 4.06e-51 167
MS.gene84694.t1 AT3G53610 39.713 209 118 3 61 268 13 214 1.07e-50 166
MS.gene84694.t1 AT3G53610 39.713 209 118 3 61 268 13 214 1.07e-50 166
MS.gene84694.t1 AT3G53610 39.713 209 118 3 61 268 13 214 1.07e-50 166
MS.gene84694.t1 AT3G09900 40.909 220 111 4 56 268 8 215 6.55e-50 164
MS.gene84694.t1 AT3G54840 51.299 154 74 1 65 217 35 188 9.74e-50 162
MS.gene84694.t1 AT3G54840 51.299 154 74 1 65 217 35 188 1.77e-49 162
MS.gene84694.t1 AT3G54840 50.980 153 74 1 66 217 2 154 4.64e-49 160
MS.gene84694.t1 AT4G19640 37.255 204 112 1 65 268 12 199 5.54e-46 153
MS.gene84694.t1 AT1G43890 40.758 211 110 6 52 259 2 200 9.79e-45 150
MS.gene84694.t1 AT1G43890 40.758 211 110 6 52 259 2 200 9.79e-45 150
MS.gene84694.t1 AT1G43890 40.758 211 110 6 52 259 2 200 9.79e-45 150
MS.gene84694.t1 AT5G45130 43.590 156 88 0 65 220 12 167 7.64e-44 147
MS.gene84694.t1 AT4G35860 51.240 121 59 0 105 225 2 122 5.73e-43 144
MS.gene84694.t1 AT5G45130 43.506 154 87 0 67 220 22 175 1.18e-42 145
MS.gene84694.t1 AT2G22290 38.854 157 96 0 64 220 10 166 1.76e-41 142
MS.gene84694.t1 AT5G10260 37.580 157 98 0 64 220 10 166 2.84e-40 139
MS.gene84694.t1 AT2G44610 37.662 154 96 0 64 217 10 163 9.94e-40 137
MS.gene84694.t1 AT5G03520 38.953 172 96 3 98 268 40 203 1.14e-39 137
MS.gene84694.t1 AT4G39890 37.419 155 96 1 64 217 10 164 1.84e-39 137
MS.gene84694.t1 AT5G03530 36.530 219 126 6 52 268 2 209 6.30e-38 132
MS.gene84694.t1 AT5G03530 36.530 219 126 6 52 268 2 209 6.30e-38 132
MS.gene84694.t1 AT4G19640 43.511 131 74 0 65 195 12 142 1.32e-35 126
MS.gene84694.t1 AT5G64990 34.783 161 105 0 64 224 8 168 2.02e-35 126
MS.gene84694.t1 AT4G19640 44.000 125 70 0 65 189 12 136 4.78e-35 123
MS.gene84694.t1 AT1G22740 38.788 165 94 3 63 220 8 172 2.11e-33 120
MS.gene84694.t1 AT2G21880 38.788 165 94 3 63 220 9 173 2.43e-33 121
MS.gene84694.t1 AT3G18820 39.394 165 93 3 63 220 8 172 7.76e-33 119
MS.gene84694.t1 AT4G09720 39.394 165 93 3 63 220 8 172 8.92e-33 119
MS.gene84694.t1 AT5G64990 33.333 168 105 1 64 224 8 175 9.02e-33 119
MS.gene84694.t1 AT1G52280 37.647 170 99 3 63 225 8 177 1.10e-32 119
MS.gene84694.t1 AT1G49300 38.323 167 96 3 63 222 8 174 5.61e-32 117
MS.gene84694.t1 AT1G49300 38.323 167 96 3 63 222 8 174 5.61e-32 117
MS.gene84694.t1 AT4G09720 38.235 170 93 3 63 220 8 177 6.32e-32 117
MS.gene84694.t1 AT5G46025 53.333 105 48 1 125 228 6 110 1.29e-31 113
MS.gene84694.t1 AT4G09720 36.932 176 93 3 63 220 8 183 8.35e-31 114
MS.gene84694.t1 AT3G16100 36.970 165 97 3 63 220 8 172 3.72e-30 112
MS.gene84694.t1 AT3G09910 37.870 169 102 3 61 227 11 178 4.72e-30 112
MS.gene84694.t1 AT3G09910 37.870 169 102 3 61 227 11 178 4.72e-30 112
MS.gene84694.t1 AT3G09910 37.870 169 102 3 61 227 11 178 4.72e-30 112
MS.gene84694.t1 AT3G09910 39.623 159 93 3 61 217 11 168 2.60e-29 110
MS.gene84694.t1 AT3G09910 39.623 159 93 3 61 217 11 168 2.60e-29 110
MS.gene84694.t1 AT5G39620 31.132 212 126 5 64 268 6 204 2.46e-28 107
MS.gene84694.t1 AT2G21880 37.838 148 85 3 80 220 1 148 4.47e-26 101
MS.gene84694.t1 AT2G21880 37.838 148 85 3 80 220 1 148 4.47e-26 101
MS.gene84694.t1 AT4G09720 40.741 135 73 3 93 220 4 138 2.69e-24 96.3
MS.gene84694.t1 AT4G09720 40.741 135 73 3 93 220 4 138 2.69e-24 96.3
MS.gene84694.t1 AT4G09720 40.741 135 73 3 93 220 4 138 2.69e-24 96.3
MS.gene84694.t1 AT2G21880 33.939 165 94 4 63 220 9 165 1.19e-23 95.5
MS.gene84694.t1 AT5G55080 30.952 168 112 3 58 224 7 171 1.26e-23 95.9
MS.gene84694.t1 AT2G44690 35.152 165 93 5 65 217 20 182 7.27e-23 93.6
MS.gene84694.t1 AT5G20020 28.641 206 130 5 58 260 7 198 1.63e-21 90.1
MS.gene84694.t1 AT5G55190 28.641 206 130 5 58 260 7 198 3.65e-21 89.4
MS.gene84694.t1 AT5G20010 29.891 184 112 5 58 238 7 176 8.61e-21 88.2
MS.gene84694.t1 AT3G48040 31.515 165 99 5 65 217 10 172 3.73e-18 80.9
MS.gene84694.t1 AT4G35020 32.168 143 87 4 65 206 8 141 3.83e-18 80.5
MS.gene84694.t1 AT4G35020 32.168 143 87 4 65 206 8 141 3.83e-18 80.5
MS.gene84694.t1 AT4G35020 32.168 143 87 4 65 206 8 141 3.83e-18 80.5
MS.gene84694.t1 AT5G45970 30.769 169 103 5 65 221 8 174 8.96e-18 79.7
MS.gene84694.t1 AT1G20090 32.121 165 98 6 65 217 7 169 9.74e-18 79.3
MS.gene84694.t1 AT5G62880 29.651 172 107 5 65 224 10 179 1.04e-17 79.7
MS.gene84694.t1 AT1G75840 31.515 165 99 6 65 217 8 170 1.48e-17 79.0
MS.gene84694.t1 AT3G48040 36.364 121 74 3 65 184 10 128 1.83e-17 78.2
MS.gene84694.t1 AT5G62880 34.711 121 76 3 65 184 10 128 7.62e-17 77.0
MS.gene84694.t1 AT3G51300 30.303 165 101 6 65 217 8 170 1.18e-16 76.6
MS.gene84694.t1 AT2G17800 33.058 121 78 3 65 184 8 126 1.61e-16 76.3
MS.gene84694.t1 AT2G17800 33.058 121 78 3 65 184 8 126 1.61e-16 76.3
MS.gene84694.t1 AT4G35950 33.058 121 78 3 65 184 8 126 1.81e-16 76.3
MS.gene84694.t1 AT4G28950 27.222 180 119 5 64 233 7 184 2.63e-16 75.9
MS.gene84694.t1 AT4G08190 57.812 64 24 1 154 217 67 127 2.98e-16 73.6
MS.gene84694.t1 AT4G35020 33.333 114 73 3 65 177 8 119 1.13e-15 72.8
MS.gene84694.t1 AT4G35020 33.333 114 73 3 65 177 8 119 1.13e-15 72.8

Find 65 sgRNAs with CRISPR-Local

Find 385 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACAACACATGCTCTTCTT+AGG 0.168776 3.4:+80953424 None:intergenic
GGTTATGGGTATGGTTATTT+TGG 0.186515 3.4:-80958739 MS.gene84694:CDS
AATATAGTCATCATTCTTAT+AGG 0.279237 3.4:-80953706 MS.gene84694:CDS
CCTGGCTGCTGATGAGAATC+AGG 0.310405 3.4:-80953512 MS.gene84694:CDS
CACCACTTCTACGATGGTTA+TGG 0.353784 3.4:-80958754 MS.gene84694:CDS
GTGGTCGTTGATGGCATTTA+TGG 0.357804 3.4:-80958874 MS.gene84694:intron
CATACTACAGGGGCGCTGTT+GGG 0.366375 3.4:-80953816 MS.gene84694:CDS
AGAAAGAAGAGAACCGTTCT+TGG 0.377427 3.4:+80956319 None:intergenic
GTGATCGAAGCTCGGACGTT+TGG 0.386754 3.4:+80953771 None:intergenic
ACCACTTCTACGATGGTTAT+GGG 0.398760 3.4:-80958753 MS.gene84694:CDS
GGCGTCGCCATTGTGCTTAA+CGG 0.398850 3.4:-80958718 MS.gene84694:intron
GCCATCAACGACCACACCTT+TGG 0.405057 3.4:+80958882 None:intergenic
GGCAAGAAGATTATTGTTCC+TGG 0.407195 3.4:-80953463 MS.gene84694:CDS
GACAACACATGCTCTTCTTA+GGG 0.416162 3.4:+80953425 None:intergenic
TCCAAAGGTGTGGTCGTTGA+TGG 0.416728 3.4:-80958883 MS.gene84694:CDS
AGAGTGTTAAGGCTCAGATC+TGG 0.425788 3.4:-80956353 MS.gene84694:CDS
GGGCGCTGTTGGGGCAATGT+TGG 0.427779 3.4:-80953806 MS.gene84694:CDS
GTCTTCAAGGTGGTTCTAAT+CGG 0.432686 3.4:-80956495 MS.gene84694:CDS
CCTGATTCTCATCAGCAGCC+AGG 0.437809 3.4:+80953512 None:intergenic
TTCTTAGGGATTTCTTGTGC+AGG 0.438762 3.4:+80953439 None:intergenic
TGAGTTTCAAACTCGTACTT+TGG 0.440485 3.4:-80956388 MS.gene84694:CDS
AAAGAATTTGCTGAGAAAGA+AGG 0.441025 3.4:-80953634 MS.gene84694:CDS
GAAGATAGACTACGTCTTCA+AGG 0.447575 3.4:-80956508 MS.gene84694:CDS
GCATACTACAGGGGCGCTGT+TGG 0.449830 3.4:-80953817 MS.gene84694:CDS
TGAAGACGTAGTCTATCTTC+TGG 0.451825 3.4:+80956511 None:intergenic
TTCTACGATGGTTATGGGTA+TGG 0.454867 3.4:-80958748 MS.gene84694:CDS
CGCAGTTCTTCTAACCATCT+AGG 0.458553 3.4:+80953745 None:intergenic
AGGAACAATAATCTTCTTGC+CGG 0.480386 3.4:+80953465 None:intergenic
GCTGATGAGAATCAGGGAAA+TGG 0.488775 3.4:-80953505 MS.gene84694:CDS
TATTGAACATAAGAGTGTTA+AGG 0.489565 3.4:-80956364 MS.gene84694:CDS
CAGTTACAAGTGCATACTAC+AGG 0.490649 3.4:-80953828 MS.gene84694:CDS
GCTTCGATCACATACCTAGA+TGG 0.498381 3.4:-80953759 MS.gene84694:CDS
GGCAACTCAGCATCTCTGTC+CGG 0.499309 3.4:-80953484 MS.gene84694:CDS
GGGATTTCTTGTGCAGGACC+AGG 0.502312 3.4:+80953445 None:intergenic
ATACTACAGGGGCGCTGTTG+GGG 0.525539 3.4:-80953815 MS.gene84694:CDS
GCTCAGATCTGGGACACTGC+TGG 0.529753 3.4:-80956342 MS.gene84694:CDS
GAGTGTTAAGGCTCAGATCT+GGG 0.538288 3.4:-80956352 MS.gene84694:CDS
TTCTGTCAAAACAGTCATGA+AGG 0.542515 3.4:+80953561 None:intergenic
GTGGACTCAAAAGCTACAAT+CGG 0.568023 3.4:-80956414 MS.gene84694:CDS
CATTGTCAACAAGAAGAACC+TGG 0.569186 3.4:-80953530 MS.gene84694:CDS
CTAATCGGTGATTCTGCAGT+CGG 0.575717 3.4:-80956480 MS.gene84694:CDS
ACCCATAACCATCGTAGAAG+TGG 0.580026 3.4:+80958752 None:intergenic
GGGACACTGCTGGCCAAGAA+CGG 0.580774 3.4:-80956332 MS.gene84694:intron
AGGAAACAAAAGTGATCTTG+AGG 0.580983 3.4:-80953686 MS.gene84694:CDS
CTAGGTATGTGATCGAAGCT+CGG 0.584273 3.4:+80953763 None:intergenic
ACCACACCTTTGGAGTGTTG+AGG 0.590907 3.4:+80958892 None:intergenic
GTTCACCACCACTTCTACGA+TGG 0.593472 3.4:-80958760 MS.gene84694:CDS
AATAAGATGCAGCTGTCGTG+TGG 0.603893 3.4:-80958943 None:intergenic
AGTTACAAGTGCATACTACA+GGG 0.605565 3.4:-80953827 MS.gene84694:CDS
ACACCTTTGGAGTGTTGAGG+TGG 0.613281 3.4:+80958895 None:intergenic
GAAAATCTCAGATACTAGCT+CGG 0.614980 3.4:-80956458 MS.gene84694:CDS
CTGGCTGCTGATGAGAATCA+GGG 0.625486 3.4:-80953511 MS.gene84694:CDS
GTTATCACCGTTAAGCACAA+TGG 0.625531 3.4:+80958711 None:intergenic
TGACTATATTCTTGTCAGCA+TGG 0.639191 3.4:+80953719 None:intergenic
ATTAGTTGCTTGCAGCGCAG+AGG 0.640396 3.4:+80953594 None:intergenic
ACCTCAACACTCCAAAGGTG+TGG 0.644070 3.4:-80958893 MS.gene84694:CDS
GCAAGCAACTAATGTTGAGA+CGG 0.646912 3.4:-80953584 MS.gene84694:CDS
CATAACCATCGTAGAAGTGG+TGG 0.649591 3.4:+80958755 None:intergenic
ACACCACCTCAACACTCCAA+AGG 0.659339 3.4:-80958898 MS.gene84694:CDS
GTTGAGGTGGTGTGACAATG+AGG 0.672135 3.4:+80958908 None:intergenic
ATAAGATGCAGCTGTCGTGT+GGG 0.672928 3.4:-80958942 None:intergenic
TGCAAGAAACGACTTCAGCG+TGG 0.696247 3.4:-80956433 MS.gene84694:CDS
GTTACAAGTGCATACTACAG+GGG 0.696627 3.4:-80953826 MS.gene84694:CDS
GCAGCGTGCAGTACCCACAG+AGG 0.703658 3.4:-80953662 MS.gene84694:CDS
GATAGACTACGTCTTCAAGG+TGG 0.739113 3.4:-80956505 MS.gene84694:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATAAATTATTCACAAATTTA+AGG - chr3.4:80954168-80954187 MS.gene84694:intron 10.0%
!! TAAATCAAAAAAAAATTACA+GGG + chr3.4:80953937-80953956 None:intergenic 10.0%
!! TAAATTTGTGAATAATTTAT+AGG + chr3.4:80954168-80954187 None:intergenic 10.0%
!!! AAAACAAATTTTTTTTTACA+GGG + chr3.4:80953962-80953981 None:intergenic 10.0%
!!! AAACATATAATTTTTTTACT+AGG - chr3.4:80954255-80954274 MS.gene84694:intron 10.0%
!!! AAATAAAATTGATTTTTGTT+TGG - chr3.4:80954028-80954047 MS.gene84694:intron 10.0%
!!! AATTATATCAAATTTAAAAC+TGG + chr3.4:80957092-80957111 None:intergenic 10.0%
!!! TTTTTTTTTTGTTTTTAACT+CGG + chr3.4:80955589-80955608 None:intergenic 10.0%
!! AAATCAAAAAAAAATTACAG+GGG + chr3.4:80953936-80953955 None:intergenic 15.0%
!! AGAACAAAAAAAAAATTTAC+AGG - chr3.4:80954093-80954112 MS.gene84694:intron 15.0%
!! GAATAATTTATAGGATTAAT+AGG + chr3.4:80954159-80954178 None:intergenic 15.0%
!! GTAAATCAAAAAAAAATTAC+AGG + chr3.4:80953938-80953957 None:intergenic 15.0%
!! TATTCCTCAATAAAAAAAAT+TGG + chr3.4:80956300-80956319 None:intergenic 15.0%
!! TGTACTTGTAATTTAAATAT+TGG + chr3.4:80958448-80958467 None:intergenic 15.0%
!!! AAAAAATATCATCTTTTTTG+AGG + chr3.4:80954402-80954421 None:intergenic 15.0%
!!! AAAAATATCATCTTTTTTGA+GGG + chr3.4:80954401-80954420 None:intergenic 15.0%
!!! AAAACAAATTTTTTTTACAG+GGG - chr3.4:80954068-80954087 MS.gene84694:intron 15.0%
!!! AAACAAATTTTTTTTTACAG+GGG + chr3.4:80953961-80953980 None:intergenic 15.0%
!!! AATTTTATACCAACTTTAAA+AGG + chr3.4:80954530-80954549 None:intergenic 15.0%
!!! ACGTTTTAAAAATTTTAAGT+TGG - chr3.4:80954765-80954784 MS.gene84694:intron 15.0%
!!! ACTGTTGATAAATAAATATT+TGG + chr3.4:80957698-80957717 None:intergenic 15.0%
!!! CAAAACAAATTTTTTTTACA+GGG - chr3.4:80954067-80954086 MS.gene84694:intron 15.0%
!!! CAAAACAAATTTTTTTTTAC+AGG + chr3.4:80953963-80953982 None:intergenic 15.0%
!!! CTTAAAATTTTTAAAACGTA+AGG + chr3.4:80954764-80954783 None:intergenic 15.0%
!!! GAAGAAAAACATAAATTTTA+TGG - chr3.4:80957338-80957357 MS.gene84694:intron 15.0%
!!! TAATGAATATCTTTATTTGT+AGG + chr3.4:80954426-80954445 None:intergenic 15.0%
!!! TCAAAACAAATTTTTTTTAC+AGG - chr3.4:80954066-80954085 MS.gene84694:intron 15.0%
!!! TTAAATAGTTTTGCTAATTT+AGG - chr3.4:80954550-80954569 MS.gene84694:intron 15.0%
!!! TTAACATTTCTCAATTTTAA+AGG - chr3.4:80955545-80955564 MS.gene84694:intron 15.0%
!! AAAAAAATCTAGTATGTGAA+TGG - chr3.4:80956675-80956694 MS.gene84694:intron 20.0%
!! AAGGTAAAATTAATGAAAGT+CGG - chr3.4:80953849-80953868 MS.gene84694:intron 20.0%
!! AATATAGTCATCATTCTTAT+AGG - chr3.4:80958651-80958670 MS.gene84694:intron 20.0%
!! ACAAAAAAAAAATTTACAGG+AGG - chr3.4:80954096-80954115 MS.gene84694:intron 20.0%
!! CTTGAAAATGTTAAAACATA+AGG + chr3.4:80955186-80955205 None:intergenic 20.0%
!! TAATTGAGTAGTTTAATTAG+CGG + chr3.4:80955747-80955766 None:intergenic 20.0%
!! TCGTATGATAGTTAAAAATA+AGG + chr3.4:80954350-80954369 None:intergenic 20.0%
!! TTATTAAACTCAATATCATG+TGG - chr3.4:80955347-80955366 MS.gene84694:intron 20.0%
!!! AAACAAATTTTTTTTACAGG+GGG - chr3.4:80954069-80954088 MS.gene84694:intron 20.0%
!!! AACAAATTTTTTTTTACAGG+GGG + chr3.4:80953960-80953979 None:intergenic 20.0%
!!! AACACCAATTTTTTTTATTG+AGG - chr3.4:80956293-80956312 MS.gene84694:intron 20.0%
!!! AAGAAATTTTCGTTTTTGTT+TGG + chr3.4:80954002-80954021 None:intergenic 20.0%
!!! ATGATTTTTATTTCAAAGAG+TGG + chr3.4:80958187-80958206 None:intergenic 20.0%
!!! ATGTTTTAACATTTTCAAGT+TGG - chr3.4:80955187-80955206 MS.gene84694:intron 20.0%
!!! ATTTTCAAAATCAGCAATTT+TGG - chr3.4:80958259-80958278 MS.gene84694:intron 20.0%
!!! GTTTATTTATCTGAAGTTAA+TGG - chr3.4:80956186-80956205 MS.gene84694:intron 20.0%
!!! GTTTTGTACTATTTTTTCTA+CGG - chr3.4:80958372-80958391 MS.gene84694:intron 20.0%
!!! GTTTTGTCTGATTTTATAAA+TGG - chr3.4:80958484-80958503 MS.gene84694:intron 20.0%
!!! TGAAACTTGTTTTATTTACA+TGG - chr3.4:80954286-80954305 MS.gene84694:intron 20.0%
!!! TGATGAAACTTAACTTATTT+TGG - chr3.4:80955287-80955306 MS.gene84694:intron 20.0%
! AAAGTCGGAGTTTATAAATT+AGG - chr3.4:80953864-80953883 MS.gene84694:intron 25.0%
! AAGTCGGAGTTTATAAATTA+GGG - chr3.4:80953865-80953884 MS.gene84694:intron 25.0%
! AATTGAGTAGTTTAATTAGC+GGG + chr3.4:80955746-80955765 None:intergenic 25.0%
! ACATCAGTCAAATTAATTCA+AGG - chr3.4:80956344-80956363 MS.gene84694:CDS 25.0%
! AGATTTATGAAATTTACGAG+GGG - chr3.4:80956716-80956735 MS.gene84694:intron 25.0%
! ATTGGTTGAGTAAAAAAACA+TGG + chr3.4:80958335-80958354 None:intergenic 25.0%
! CAATTAGAGAATTAAAGAGA+AGG + chr3.4:80953800-80953819 None:intergenic 25.0%
! CAGATTTATGAAATTTACGA+GGG - chr3.4:80956715-80956734 MS.gene84694:intron 25.0%
! CAGTAAATTGAGAAAATCAA+TGG - chr3.4:80957617-80957636 MS.gene84694:intron 25.0%
! GAACCAAATCATTTATTCAT+GGG + chr3.4:80957581-80957600 None:intergenic 25.0%
! GAACTAAAAAATTGTATTGG+AGG - chr3.4:80954940-80954959 MS.gene84694:intron 25.0%
! GAGGAACTAAAAAATTGTAT+TGG - chr3.4:80954937-80954956 MS.gene84694:intron 25.0%
! TAAAAAATTGTATTGGAGGA+GGG - chr3.4:80954944-80954963 MS.gene84694:intron 25.0%
! TAAATTACAAGTACATCGAA+TGG - chr3.4:80958453-80958472 MS.gene84694:intron 25.0%
! TAATAGTTGTAAAGAGAAGA+AGG - chr3.4:80957399-80957418 MS.gene84694:intron 25.0%
! TATGTGAATTAACCCATTTA+GGG - chr3.4:80956613-80956632 MS.gene84694:intron 25.0%
! TGAAACCTAGAATAAACATA+GGG + chr3.4:80954733-80954752 None:intergenic 25.0%
! TGATTATTTATAGAGCAGTT+AGG - chr3.4:80957272-80957291 MS.gene84694:intron 25.0%
! TTGAAACCTAGAATAAACAT+AGG + chr3.4:80954734-80954753 None:intergenic 25.0%
! TTGGTTGAGTAAAAAAACAT+GGG + chr3.4:80958334-80958353 None:intergenic 25.0%
!! AACCTTTTGTACATATTAAC+AGG + chr3.4:80958122-80958141 None:intergenic 25.0%
!! AATTTACTGATTACTCACTT+TGG + chr3.4:80957606-80957625 None:intergenic 25.0%
!! ACCTTTTGTACATATTAACA+GGG + chr3.4:80958121-80958140 None:intergenic 25.0%
!! TATCAATAACACGTTTTCAA+AGG + chr3.4:80958236-80958255 None:intergenic 25.0%
!! TCAAATTTAAAACTGGAATG+TGG + chr3.4:80957085-80957104 None:intergenic 25.0%
!! TGATTTTACCATAAGTTCAA+AGG + chr3.4:80956924-80956943 None:intergenic 25.0%
!!! AAGATATGGTTTTCTAGTTT+TGG - chr3.4:80953713-80953732 MS.gene84694:CDS 25.0%
!!! ACCATATTTTGATTTGAAAC+CGG + chr3.4:80956948-80956967 None:intergenic 25.0%
!!! ATTTCTCAATTTTAAAGGAG+TGG - chr3.4:80955550-80955569 MS.gene84694:intron 25.0%
!!! TATTGAACATAAGAGTGTTA+AGG - chr3.4:80955993-80956012 MS.gene84694:intron 25.0%
!!! TTGTTTATTGTTTTTGCCTA+TGG - chr3.4:80956492-80956511 MS.gene84694:CDS 25.0%
!!! TTTGAATTTGGTTTGAAAAG+TGG + chr3.4:80955723-80955742 None:intergenic 25.0%
AAAAATTACAGGGGAAAAAC+CGG + chr3.4:80953927-80953946 None:intergenic 30.0%
AAAATTTACAGGAGGAAAAC+CGG - chr3.4:80954104-80954123 MS.gene84694:intron 30.0%
AAATACTTGTAGGGAGAAAT+GGG + chr3.4:80957981-80958000 None:intergenic 30.0%
AACTAATCTATTGTTTCCTC+CGG - chr3.4:80955612-80955631 MS.gene84694:intron 30.0%
AATCTGCAATTCTCAACATA+TGG + chr3.4:80953827-80953846 None:intergenic 30.0%
ACCACTATTAGCATACTATA+TGG + chr3.4:80956863-80956882 None:intergenic 30.0%
ACCCTGTTAATATGTACAAA+AGG - chr3.4:80958117-80958136 MS.gene84694:intron 30.0%
ATACTTCTGATCATTTCATC+AGG - chr3.4:80958419-80958438 MS.gene84694:intron 30.0%
CAATGATTCCTTTGAACTTA+TGG - chr3.4:80956913-80956932 MS.gene84694:intron 30.0%
CCTGTAATATAAGTCATTTC+CGG + chr3.4:80954126-80954145 None:intergenic 30.0%
CGGAAATGACTTATATTACA+GGG - chr3.4:80954124-80954143 MS.gene84694:intron 30.0%
CTAAAAAATTGTATTGGAGG+AGG - chr3.4:80954943-80954962 MS.gene84694:intron 30.0%
GAAAATCGAAAGACTTTGAA+AGG + chr3.4:80954500-80954519 None:intergenic 30.0%
GAAACCTAGAATAAACATAG+GGG + chr3.4:80954732-80954751 None:intergenic 30.0%
GAAATCAAAAGCAAGAACAA+TGG - chr3.4:80955798-80955817 MS.gene84694:intron 30.0%
GAAATGACTTATATTACAGG+GGG - chr3.4:80954126-80954145 MS.gene84694:intron 30.0%
GAACTTATGGTAAAATCATC+CGG - chr3.4:80956926-80956945 MS.gene84694:intron 30.0%
GCAGATTTATGAAATTTACG+AGG - chr3.4:80956714-80956733 MS.gene84694:intron 30.0%
GCGTAGGAAAATTTATATGA+CGG - chr3.4:80954232-80954251 MS.gene84694:intron 30.0%
GGAAATGACTTATATTACAG+GGG - chr3.4:80954125-80954144 MS.gene84694:intron 30.0%
GGAACCAAATCATTTATTCA+TGG + chr3.4:80957582-80957601 None:intergenic 30.0%
GTATGTGAATTAACCCATTT+AGG - chr3.4:80956612-80956631 MS.gene84694:intron 30.0%
GTCAAAAAGTGATTTATGAC+AGG + chr3.4:80955688-80955707 None:intergenic 30.0%
GTGTCAAACAAATTCAAGAT+TGG + chr3.4:80956396-80956415 None:intergenic 30.0%
TAAAACATAAGGGATTCAAG+AGG - chr3.4:80955487-80955506 MS.gene84694:intron 30.0%
TAATCCCCTATGTTTATTCT+AGG - chr3.4:80954725-80954744 MS.gene84694:intron 30.0%
TACTTCTGATCATTTCATCA+GGG - chr3.4:80958420-80958439 MS.gene84694:intron 30.0%
TCCATATAGTATGCTAATAG+TGG - chr3.4:80956859-80956878 MS.gene84694:intron 30.0%
TCCGGTTTCAAATCAAAATA+TGG - chr3.4:80956944-80956963 MS.gene84694:intron 30.0%
TGGAAGAAATAGAGGAAAAT+GGG - chr3.4:80954858-80954877 MS.gene84694:intron 30.0%
TGTTCATATACATAGTGTGT+TGG + chr3.4:80957133-80957152 None:intergenic 30.0%
TTAAACTCAATATCATGTGG+CGG - chr3.4:80955350-80955369 MS.gene84694:intron 30.0%
TTTCAACTTTCAACCTTCTT+GGG - chr3.4:80955635-80955654 MS.gene84694:intron 30.0%
! AGCAAGTATCTGTTACTTAA+GGG + chr3.4:80957940-80957959 None:intergenic 30.0%
! ATGTATTGACCGATTTCAAT+TGG - chr3.4:80957023-80957042 MS.gene84694:intron 30.0%
! CATATAAATTTTCCTACGCA+CGG + chr3.4:80954231-80954250 None:intergenic 30.0%
! GTTGTTCATTTGCGTTTTAA+AGG + chr3.4:80955425-80955444 None:intergenic 30.0%
! GTTTATTCTAGGTTTCAAGT+TGG - chr3.4:80954736-80954755 MS.gene84694:intron 30.0%
! TATGTTGCTTAAACAAAGCT+GGG - chr3.4:80957433-80957452 MS.gene84694:intron 30.0%
! TCGATTTTGAATGTAGAGTT+GGG + chr3.4:80955771-80955790 None:intergenic 30.0%
! TTCGATTTTGAATGTAGAGT+TGG + chr3.4:80955772-80955791 None:intergenic 30.0%
! TTCGTTGGATGTTTAAGATA+TGG - chr3.4:80953699-80953718 MS.gene84694:CDS 30.0%
! TTTTTGCCTATGGTTTCTTT+GGG - chr3.4:80956502-80956521 MS.gene84694:CDS 30.0%
!! AAAGAATTTGCTGAGAAAGA+AGG - chr3.4:80958723-80958742 MS.gene84694:CDS 30.0%
!! GCTGATTATTTTTCTGTCTT+GGG - chr3.4:80958281-80958300 MS.gene84694:intron 30.0%
!! TGATTTTTGTTTGGCCTATT+GGG - chr3.4:80954037-80954056 MS.gene84694:intron 30.0%
!! TTAATTAGCGGGTTTGAATT+TGG + chr3.4:80955735-80955754 None:intergenic 30.0%
!! TTGATTTTTGTTTGGCCTAT+TGG - chr3.4:80954036-80954055 MS.gene84694:intron 30.0%
!!! GCGTTTTAAAGGTTTTAAGT+CGG + chr3.4:80955414-80955433 None:intergenic 30.0%
!!! TGTTCTTGCTTTTGATTTCT+TGG + chr3.4:80955797-80955816 None:intergenic 30.0%
!!! TTTTTTAGTTCCTCCAAATG+AGG + chr3.4:80954931-80954950 None:intergenic 30.0%
AAACTCGCAAACAAAGTCTA+AGG + chr3.4:80954793-80954812 None:intergenic 35.0%
AAAGAAAAGGAAAGGCTTTG+AGG + chr3.4:80955141-80955160 None:intergenic 35.0%
AACTCGCAAACAAAGTCTAA+GGG + chr3.4:80954792-80954811 None:intergenic 35.0%
AAGTGATTTATGACAGGTTG+CGG + chr3.4:80955682-80955701 None:intergenic 35.0%
AAGTTAATAAAACCGTGCGT+AGG - chr3.4:80954216-80954235 MS.gene84694:intron 35.0%
AATACAAAACCCTCCTCATT+TGG - chr3.4:80954915-80954934 MS.gene84694:intron 35.0%
AGAAGGTTGAAAGTTGAAAC+CGG + chr3.4:80955634-80955653 None:intergenic 35.0%
AGGAAACAAAAGTGATCTTG+AGG - chr3.4:80958671-80958690 MS.gene84694:intron 35.0%
AGGAACAATAATCTTCTTGC+CGG + chr3.4:80958895-80958914 None:intergenic 35.0%
AGTTACAAGTGCATACTACA+GGG - chr3.4:80958530-80958549 MS.gene84694:intron 35.0%
ATCTTTACCCCCTGTAATAT+AGG - chr3.4:80953895-80953914 MS.gene84694:intron 35.0%
ATTCTGTGATACTAGCATAC+TGG + chr3.4:80958077-80958096 None:intergenic 35.0%
ATTTACTTGAATGACACGTG+TGG - chr3.4:80957219-80957238 MS.gene84694:intron 35.0%
ATTTCAATTGGCCAAATCTG+TGG - chr3.4:80957035-80957054 MS.gene84694:intron 35.0%
ATTTGGAAGTTGGGAGAAAA+TGG - chr3.4:80957315-80957334 MS.gene84694:intron 35.0%
CAACAAATGGAGGAAAGAAT+AGG + chr3.4:80953525-80953544 None:intergenic 35.0%
CAGATTTGGCCAATTGAAAT+CGG + chr3.4:80957035-80957054 None:intergenic 35.0%
CAGCCCATGAATAAATGATT+TGG - chr3.4:80957575-80957594 MS.gene84694:intron 35.0%
CAGTTTGCATGCTCTTTAAT+CGG - chr3.4:80956787-80956806 MS.gene84694:intron 35.0%
CCAGAAAGGAAATACTTGTA+GGG + chr3.4:80957990-80958009 None:intergenic 35.0%
CCGGAAATGACTTATATTAC+AGG - chr3.4:80954123-80954142 MS.gene84694:intron 35.0%
CGAATCTTTGAACGATTAAG+TGG + chr3.4:80955252-80955271 None:intergenic 35.0%
CGCAGGATTTAAGTAAGAAA+AGG - chr3.4:80956560-80956579 MS.gene84694:intron 35.0%
CTCTAATTTATTGCTGGATC+AGG + chr3.4:80957770-80957789 None:intergenic 35.0%
GAAAATCTCAGATACTAGCT+CGG - chr3.4:80955899-80955918 MS.gene84694:intron 35.0%
GAAATACTTGTAGGGAGAAA+TGG + chr3.4:80957982-80958001 None:intergenic 35.0%
GCAAGACTCTAATTTATTGC+TGG + chr3.4:80957776-80957795 None:intergenic 35.0%
GCACATGCATGATAAATCAT+GGG + chr3.4:80957658-80957677 None:intergenic 35.0%
GGAAAAAATGAATGAGCAAG+TGG - chr3.4:80954838-80954857 MS.gene84694:intron 35.0%
GGGTCAGAAAGTAAAAAGAA+CGG - chr3.4:80957453-80957472 MS.gene84694:intron 35.0%
GGTCAGAAAGTAAAAAGAAC+GGG - chr3.4:80957454-80957473 MS.gene84694:intron 35.0%
GTGGAAGAAATAGAGGAAAA+TGG - chr3.4:80954857-80954876 MS.gene84694:intron 35.0%
GTTATACAAGTCCACAGATT+TGG + chr3.4:80957049-80957068 None:intergenic 35.0%
GTTCAAAGGAATCATTGCTA+AGG + chr3.4:80956910-80956929 None:intergenic 35.0%
GTTGAGAATTGCAGATTTCA+AGG - chr3.4:80953830-80953849 MS.gene84694:CDS 35.0%
GTTTCAACTTTCAACCTTCT+TGG - chr3.4:80955634-80955653 MS.gene84694:intron 35.0%
TAGGAGTTACTGAGATTTCA+GGG - chr3.4:80957521-80957540 MS.gene84694:intron 35.0%
TCAACCAATGTTCTTCAATC+TGG - chr3.4:80958346-80958365 MS.gene84694:intron 35.0%
TGACTATATTCTTGTCAGCA+TGG + chr3.4:80958641-80958660 None:intergenic 35.0%
TGAGTTTCAAACTCGTACTT+TGG - chr3.4:80955969-80955988 MS.gene84694:intron 35.0%
TGCACATGCATGATAAATCA+TGG + chr3.4:80957659-80957678 None:intergenic 35.0%
TTACTTAAGGGAGTTAGAGT+TGG + chr3.4:80957928-80957947 None:intergenic 35.0%
TTCTGTCAAAACAGTCATGA+AGG + chr3.4:80958799-80958818 None:intergenic 35.0%
TTTGGAAGTTGGGAGAAAAT+GGG - chr3.4:80957316-80957335 MS.gene84694:intron 35.0%
! AAATTCTTTTGCATCCTCTG+TGG + chr3.4:80958712-80958731 None:intergenic 35.0%
! AAGAAAAGGAAAGGCTTTGA+GGG + chr3.4:80955140-80955159 None:intergenic 35.0%
! AATTCTTTTGCATCCTCTGT+GGG + chr3.4:80958711-80958730 None:intergenic 35.0%
! ACATTGATGGGAAATGGATT+TGG - chr3.4:80957298-80957317 MS.gene84694:intron 35.0%
! GAGCAAGTATCTGTTACTTA+AGG + chr3.4:80957941-80957960 None:intergenic 35.0%
! GGTTATGGGTATGGTTATTT+TGG - chr3.4:80953618-80953637 MS.gene84694:CDS 35.0%
! GTATGTTGCTTAAACAAAGC+TGG - chr3.4:80957432-80957451 MS.gene84694:intron 35.0%
! GTTTTTGCCTATGGTTTCTT+TGG - chr3.4:80956501-80956520 MS.gene84694:CDS 35.0%
! TGAATTAACCCATTTAGGGT+TGG - chr3.4:80956617-80956636 MS.gene84694:intron 35.0%
! TTACTGATTACTCACTTTGG+AGG + chr3.4:80957603-80957622 None:intergenic 35.0%
! TTAGACTTTGTTTGCGAGTT+TGG - chr3.4:80954792-80954811 MS.gene84694:intron 35.0%
! TTTGAAAGGAGCACAGTTAA+AGG + chr3.4:80954486-80954505 None:intergenic 35.0%
!! ATTTGGTTTGAAAAGTGGAG+TGG + chr3.4:80955718-80955737 None:intergenic 35.0%
!! ATTTTTGTTTGGCCTATTGG+GGG - chr3.4:80954039-80954058 MS.gene84694:intron 35.0%
!! GATTTTTGTTTGGCCTATTG+GGG - chr3.4:80954038-80954057 MS.gene84694:intron 35.0%
!! GGCTGATTATTTTTCTGTCT+TGG - chr3.4:80958280-80958299 MS.gene84694:intron 35.0%
!! TCGTTTTTGTTTGGCCTATT+GGG + chr3.4:80953993-80954012 None:intergenic 35.0%
!! TCTCAATTTTAAAGGAGTGG+CGG - chr3.4:80955553-80955572 MS.gene84694:intron 35.0%
!! TGTTGGTAGCATTTCTAACA+TGG + chr3.4:80957116-80957135 None:intergenic 35.0%
!! TTCGTTTTTGTTTGGCCTAT+TGG + chr3.4:80953994-80954013 None:intergenic 35.0%
!!! TCGTGATGTCCTTTTAAAGT+TGG - chr3.4:80954518-80954537 MS.gene84694:intron 35.0%
!!! TGTTTTGATTTACCCCCAAT+AGG - chr3.4:80953976-80953995 MS.gene84694:intron 35.0%
!!! TGTTTTGATTTACCCCCAAT+AGG + chr3.4:80953995-80953976 None:intergenic 35.0%
ACCACTTCTACGATGGTTAT+GGG - chr3.4:80953604-80953623 MS.gene84694:CDS 40.0%
ACGAAGTAAGACGACATTGA+AGG + chr3.4:80953684-80953703 None:intergenic 40.0%
ACTCATCCCAAAGAAACCAT+AGG + chr3.4:80956511-80956530 None:intergenic 40.0%
AGAAAGAAGAGAACCGTTCT+TGG + chr3.4:80956041-80956060 None:intergenic 40.0%
AGCAGTTAGGAAGACATTGA+TGG - chr3.4:80957285-80957304 MS.gene84694:intron 40.0%
AGGAAGACATTGATGGGAAA+TGG - chr3.4:80957292-80957311 MS.gene84694:intron 40.0%
AGGTAGGTTATAAGGATGTG+TGG + chr3.4:80957849-80957868 None:intergenic 40.0%
AGTGATTTATGACAGGTTGC+GGG + chr3.4:80955681-80955700 None:intergenic 40.0%
ATCCCAACAACGACAACAAA+TGG + chr3.4:80953538-80953557 None:intergenic 40.0%
ATGTGTGGAGAGAACAATAG+GGG + chr3.4:80957834-80957853 None:intergenic 40.0%
ATTGACGTTGTTGGTGTGTT+TGG - chr3.4:80953766-80953785 MS.gene84694:CDS 40.0%
ATTGGCAGAGGTAGGTTATA+AGG + chr3.4:80957857-80957876 None:intergenic 40.0%
CAACAACGTCAATGAACCAA+AGG + chr3.4:80953759-80953778 None:intergenic 40.0%
CAATAGGGGATTCAGTTTAG+CGG + chr3.4:80957820-80957839 None:intergenic 40.0%
CAGTTACAAGTGCATACTAC+AGG - chr3.4:80958529-80958548 MS.gene84694:intron 40.0%
CATGCATGATAAATCATGGG+TGG + chr3.4:80957655-80957674 None:intergenic 40.0%
CATTGTCAACAAGAAGAACC+TGG - chr3.4:80958827-80958846 MS.gene84694:intron 40.0%
CCCTACAAGTATTTCCTTTC+TGG - chr3.4:80957987-80958006 MS.gene84694:intron 40.0%
CCTGTAATATAGGCCATTTC+CGG - chr3.4:80953905-80953924 MS.gene84694:intron 40.0%
CGGAAATGGCCTATATTACA+GGG + chr3.4:80953907-80953926 None:intergenic 40.0%
CTAGGAGTTACTGAGATTTC+AGG - chr3.4:80957520-80957539 MS.gene84694:intron 40.0%
CTCACCAGATTGAAGAACAT+TGG + chr3.4:80958353-80958372 None:intergenic 40.0%
GAAATAGAGGAAAATGGGAG+AGG - chr3.4:80954863-80954882 MS.gene84694:intron 40.0%
GAAATGGCCTATATTACAGG+GGG + chr3.4:80953905-80953924 None:intergenic 40.0%
GAAGATAGACTACGTCTTCA+AGG - chr3.4:80955849-80955868 MS.gene84694:intron 40.0%
GACAACACATGCTCTTCTTA+GGG + chr3.4:80958935-80958954 None:intergenic 40.0%
GATGTGTGGAGAGAACAATA+GGG + chr3.4:80957835-80957854 None:intergenic 40.0%
GCAAGCAACTAATGTTGAGA+CGG - chr3.4:80958773-80958792 MS.gene84694:intron 40.0%
GCAGTTAGGAAGACATTGAT+GGG - chr3.4:80957286-80957305 MS.gene84694:intron 40.0%
GCCAGAAAGGAAATACTTGT+AGG + chr3.4:80957991-80958010 None:intergenic 40.0%
GGAAATGGCCTATATTACAG+GGG + chr3.4:80953906-80953925 None:intergenic 40.0%
GGCAAGAAGATTATTGTTCC+TGG - chr3.4:80958894-80958913 MS.gene84694:CDS 40.0%
GTAGTTGTGTTTAGAGGGAA+AGG + chr3.4:80957798-80957817 None:intergenic 40.0%
GTATGCATTCGACATGAATG+AGG + chr3.4:80956981-80957000 None:intergenic 40.0%
GTGGACTCAAAAGCTACAAT+CGG - chr3.4:80955943-80955962 MS.gene84694:intron 40.0%
GTTACAAGTGCATACTACAG+GGG - chr3.4:80958531-80958550 MS.gene84694:intron 40.0%
GTTATCACCGTTAAGCACAA+TGG + chr3.4:80953649-80953668 None:intergenic 40.0%
GTTGGATTTCATACGTCACA+AGG - chr3.4:80957241-80957260 MS.gene84694:intron 40.0%
TAGCGGTAGTTGTGTTTAGA+GGG + chr3.4:80957803-80957822 None:intergenic 40.0%
TCAATGTCGTCTTACTTCGT+TGG - chr3.4:80953684-80953703 MS.gene84694:CDS 40.0%
TCGGCATATTTGAACTTCAG+TGG - chr3.4:80956806-80956825 MS.gene84694:intron 40.0%
TGAAGACGTAGTCTATCTTC+TGG + chr3.4:80955849-80955868 None:intergenic 40.0%
TGACAACACATGCTCTTCTT+AGG + chr3.4:80958936-80958955 None:intergenic 40.0%
TGAGCAAGTGGAAGAAATAG+AGG - chr3.4:80954850-80954869 MS.gene84694:intron 40.0%
TTAGCGGTAGTTGTGTTTAG+AGG + chr3.4:80957804-80957823 None:intergenic 40.0%
TTAGTTCCTCCAAATGAGGA+GGG + chr3.4:80954927-80954946 None:intergenic 40.0%
TTCTACGATGGTTATGGGTA+TGG - chr3.4:80953609-80953628 MS.gene84694:CDS 40.0%
TTCTTAGGGATTTCTTGTGC+AGG + chr3.4:80958921-80958940 None:intergenic 40.0%
TTGGAGGGAAAGAAAAGGAA+AGG + chr3.4:80955149-80955168 None:intergenic 40.0%
! ACTTTGTTTGCGAGTTTGGA+GGG - chr3.4:80954796-80954815 MS.gene84694:intron 40.0%
! CTTTGGTTCATTGACGTTGT+TGG - chr3.4:80953757-80953776 MS.gene84694:CDS 40.0%
! GGGAAATGGATTTGGAAGTT+GGG - chr3.4:80957306-80957325 MS.gene84694:intron 40.0%
! TGGGAAATGGATTTGGAAGT+TGG - chr3.4:80957305-80957324 MS.gene84694:intron 40.0%
! TGTATTGGAGGAGGGTTTTA+GGG - chr3.4:80954952-80954971 MS.gene84694:intron 40.0%
! TTGTATTGGAGGAGGGTTTT+AGG - chr3.4:80954951-80954970 MS.gene84694:intron 40.0%
! TTTAGTTCCTCCAAATGAGG+AGG + chr3.4:80954928-80954947 None:intergenic 40.0%
!! AATTTTAAAGGAGTGGCGGT+GGG - chr3.4:80955557-80955576 MS.gene84694:intron 40.0%
!! AGAAAAGGAAAGGCTTTGAG+GGG + chr3.4:80955139-80955158 None:intergenic 40.0%
!! ATTTGACTGATGTTGACTCG+AGG + chr3.4:80956337-80956356 None:intergenic 40.0%
!! CGTTTTTGTTTGGCCTATTG+GGG + chr3.4:80953992-80954011 None:intergenic 40.0%
!! CTCCATTTGTTGTCGTTGTT+GGG - chr3.4:80953533-80953552 MS.gene84694:CDS 40.0%
!! GTCTTCAAGGTGGTTCTAAT+CGG - chr3.4:80955862-80955881 MS.gene84694:intron 40.0%
!! GTTTTTGTTTGGCCTATTGG+GGG + chr3.4:80953991-80954010 None:intergenic 40.0%
!! TAAGGCTTTGTTTGCGAGTT+TGG + chr3.4:80955168-80955187 None:intergenic 40.0%
AACCCAAGCCAACCCTAAAT+GGG + chr3.4:80956628-80956647 None:intergenic 45.0%
ACAAAACCCTCCTCATTTGG+AGG - chr3.4:80954918-80954937 MS.gene84694:intron 45.0%
ACCCATAACCATCGTAGAAG+TGG + chr3.4:80953608-80953627 None:intergenic 45.0%
ACGTCAATGAACCAAAGGCA+TGG + chr3.4:80953754-80953773 None:intergenic 45.0%
ACTTGAATGACACGTGTGGT+TGG - chr3.4:80957223-80957242 MS.gene84694:intron 45.0%
AGATAGCACTCTCACAGGAT+TGG + chr3.4:80957875-80957894 None:intergenic 45.0%
AGGTTGAAAGTTGAAACCGG+AGG + chr3.4:80955631-80955650 None:intergenic 45.0%
AGTTTGAGTGTGTATGAGCG+AGG - chr3.4:80956528-80956547 MS.gene84694:CDS 45.0%
ATAGAGGAAAATGGGAGAGG+AGG - chr3.4:80954866-80954885 MS.gene84694:intron 45.0%
CACCACTTCTACGATGGTTA+TGG - chr3.4:80953603-80953622 MS.gene84694:CDS 45.0%
CAGTGAGTTGCTCACAATAG+AGG - chr3.4:80957742-80957761 MS.gene84694:intron 45.0%
CATAACCATCGTAGAAGTGG+TGG + chr3.4:80953605-80953624 None:intergenic 45.0%
CATACTGCCTGACTTAACTC+AGG - chr3.4:80956996-80957015 MS.gene84694:intron 45.0%
CATGTCACCTGAGTTAAGTC+AGG + chr3.4:80957006-80957025 None:intergenic 45.0%
CCAACAACGACAACAAATGG+AGG + chr3.4:80953535-80953554 None:intergenic 45.0%
CCGGAAATGGCCTATATTAC+AGG + chr3.4:80953908-80953927 None:intergenic 45.0%
CGAGTTTGGAGGGAAAGAAA+AGG + chr3.4:80955154-80955173 None:intergenic 45.0%
CGCAGTTCTTCTAACCATCT+AGG + chr3.4:80958615-80958634 None:intergenic 45.0%
CTAATCGGTGATTCTGCAGT+CGG - chr3.4:80955877-80955896 MS.gene84694:intron 45.0%
CTAGGTATGTGATCGAAGCT+CGG + chr3.4:80958597-80958616 None:intergenic 45.0%
CTCAGTAACTCCTAGCTGTT+GGG + chr3.4:80957515-80957534 None:intergenic 45.0%
GAGTGTTAAGGCTCAGATCT+GGG - chr3.4:80956005-80956024 MS.gene84694:intron 45.0%
GATAGACTACGTCTTCAAGG+TGG - chr3.4:80955852-80955871 MS.gene84694:intron 45.0%
GCTGATGAGAATCAGGGAAA+TGG - chr3.4:80958852-80958871 MS.gene84694:intron 45.0%
GCTGTGTGCTTACAGACATT+GGG - chr3.4:80958009-80958028 MS.gene84694:intron 45.0%
GCTTCGATCACATACCTAGA+TGG - chr3.4:80958598-80958617 MS.gene84694:intron 45.0%
GGATGTGTGGAGAGAACAAT+AGG + chr3.4:80957836-80957855 None:intergenic 45.0%
GGTGCATGAGTTGTACACTA+AGG + chr3.4:80958100-80958119 None:intergenic 45.0%
GTAACAGATACTTGCTCAGC+TGG - chr3.4:80957944-80957963 MS.gene84694:intron 45.0%
TACAGGGGAAAAACCGGAAA+TGG + chr3.4:80953921-80953940 None:intergenic 45.0%
TAGAGGAAAATGGGAGAGGA+GGG - chr3.4:80954867-80954886 MS.gene84694:intron 45.0%
TCTCAGTAACTCCTAGCTGT+TGG + chr3.4:80957516-80957535 None:intergenic 45.0%
TGTGAGCAACTCACTGTAGA+GGG + chr3.4:80957738-80957757 None:intergenic 45.0%
TGTTGTCGTTGTTGGGATCT+TGG - chr3.4:80953540-80953559 MS.gene84694:CDS 45.0%
TTGTGAGCAACTCACTGTAG+AGG + chr3.4:80957739-80957758 None:intergenic 45.0%
! AGAGTGTTAAGGCTCAGATC+TGG - chr3.4:80956004-80956023 MS.gene84694:intron 45.0%
! CAAAGGCATGGGAAGTTTGA+GGG + chr3.4:80953742-80953761 None:intergenic 45.0%
! CGTCAATGAACCAAAGGCAT+GGG + chr3.4:80953753-80953772 None:intergenic 45.0%
! CTTTGTTTGCGAGTTTGGAG+GGG - chr3.4:80954797-80954816 MS.gene84694:intron 45.0%
! GACTTTGTTTGCGAGTTTGG+AGG - chr3.4:80954795-80954814 MS.gene84694:intron 45.0%
!! AACCCATTTAGGGTTGGCTT+GGG - chr3.4:80956623-80956642 MS.gene84694:intron 45.0%
!! AATCCTGTGAGAGTGCTATC+TGG - chr3.4:80957874-80957893 MS.gene84694:intron 45.0%
!! CAATTTTAAAGGAGTGGCGG+TGG - chr3.4:80955556-80955575 MS.gene84694:intron 45.0%
!! CCTCCATTTGTTGTCGTTGT+TGG - chr3.4:80953532-80953551 MS.gene84694:CDS 45.0%
!! GCTTTGTTTGCGAGTTTGGA+GGG + chr3.4:80955164-80955183 None:intergenic 45.0%
!! GTATTGGAGGAGGGTTTTAG+GGG - chr3.4:80954953-80954972 MS.gene84694:intron 45.0%
!! GTGGTCGTTGATGGCATTTA+TGG - chr3.4:80953483-80953502 MS.gene84694:CDS 45.0%
!! GTTTGACTGATGTTGACTCG+AGG - chr3.4:80956428-80956447 MS.gene84694:CDS 45.0%
!! TAACCCATTTAGGGTTGGCT+TGG - chr3.4:80956622-80956641 MS.gene84694:intron 45.0%
!!! TATTGGAGGAGGGTTTTAGG+GGG - chr3.4:80954954-80954973 MS.gene84694:intron 45.0%
!! AAAATATAAAATAAAACATA+AGG - chr3.4:80955476-80955495 MS.gene84694:intron 5.0%
!! AAATATAAAATAAAACATAA+GGG - chr3.4:80955477-80955496 MS.gene84694:intron 5.0%
!!! AAAACATTTTTTAATTTTTT+TGG - chr3.4:80955322-80955341 MS.gene84694:intron 5.0%
!!! CTTATTTAATTTTATTTTTT+TGG - chr3.4:80954317-80954336 MS.gene84694:intron 5.0%
!!! GATTTTTTTTTTTTTAAATT+CGG + chr3.4:80956664-80956683 None:intergenic 5.0%
!!! TTTTATTTTATATTTTAAGT+TGG + chr3.4:80955472-80955491 None:intergenic 5.0%
AAAATGGGAGAGGAGGGCTT+TGG - chr3.4:80954873-80954892 MS.gene84694:intron 50.0%
AAATGGGAGAGGAGGGCTTT+GGG - chr3.4:80954874-80954893 MS.gene84694:intron 50.0%
ACAATGGCGAGTGCAGGTTA+CGG - chr3.4:80955814-80955833 MS.gene84694:intron 50.0%
ACACCACCTCAACACTCCAA+AGG - chr3.4:80953459-80953478 MS.gene84694:CDS 50.0%
ACCTCAACACTCCAAAGGTG+TGG - chr3.4:80953464-80953483 MS.gene84694:CDS 50.0%
AGACCAGATAGCACTCTCAC+AGG + chr3.4:80957880-80957899 None:intergenic 50.0%
AGCGATACAGACTGCAGAGT+AGG + chr3.4:80957372-80957391 None:intergenic 50.0%
AGTAACTCCTAGCTGTTGGG+AGG + chr3.4:80957512-80957531 None:intergenic 50.0%
ATTAGTTGCTTGCAGCGCAG+AGG + chr3.4:80958766-80958785 None:intergenic 50.0%
CATAACTCCTCCCAACAGCT+AGG - chr3.4:80957502-80957521 MS.gene84694:intron 50.0%
CCTCAAACTTCCCATGCCTT+TGG - chr3.4:80953740-80953759 MS.gene84694:CDS 50.0%
CTGGCTGCTGATGAGAATCA+GGG - chr3.4:80958846-80958865 MS.gene84694:intron 50.0%
CTGTAAGCACACAGCCAGAA+AGG + chr3.4:80958004-80958023 None:intergenic 50.0%
GAACCCAAGCCAACCCTAAA+TGG + chr3.4:80956629-80956648 None:intergenic 50.0%
GACAGGTTGCGGGTGATTAT+TGG + chr3.4:80955671-80955690 None:intergenic 50.0%
GGCTGTGTGCTTACAGACAT+TGG - chr3.4:80958008-80958027 MS.gene84694:intron 50.0%
GGGAGAAATGGGTGAGTGTT+TGG + chr3.4:80957970-80957989 None:intergenic 50.0%
GGTTGCGGGTGATTATTGGT+TGG + chr3.4:80955667-80955686 None:intergenic 50.0%
GTTCACCACCACTTCTACGA+TGG - chr3.4:80953597-80953616 MS.gene84694:CDS 50.0%
GTTGAGGTGGTGTGACAATG+AGG + chr3.4:80953452-80953471 None:intergenic 50.0%
TGCAAGAAACGACTTCAGCG+TGG - chr3.4:80955924-80955943 MS.gene84694:intron 50.0%
TTTGCGAGTTTGGAGGGGAA+GGG - chr3.4:80954802-80954821 MS.gene84694:intron 50.0%
! CCAAAGGCATGGGAAGTTTG+AGG + chr3.4:80953743-80953762 None:intergenic 50.0%
! CGGGTGATTATTGGTTGGTG+GGG + chr3.4:80955662-80955681 None:intergenic 50.0%
! GCGGGTGATTATTGGTTGGT+GGG + chr3.4:80955663-80955682 None:intergenic 50.0%
! TCCAAAGGTGTGGTCGTTGA+TGG - chr3.4:80953474-80953493 MS.gene84694:CDS 50.0%
! TGCGGGTGATTATTGGTTGG+TGG + chr3.4:80955664-80955683 None:intergenic 50.0%
!! ACACCTTTGGAGTGTTGAGG+TGG + chr3.4:80953465-80953484 None:intergenic 50.0%
!! ACCACACCTTTGGAGTGTTG+AGG + chr3.4:80953468-80953487 None:intergenic 50.0%
!! GACTGATGTTGACTCGAGGT+TGG - chr3.4:80956432-80956451 MS.gene84694:CDS 50.0%
!! GGCTTTGTTTGCGAGTTTGG+AGG + chr3.4:80955165-80955184 None:intergenic 50.0%
!! TTAGGGTTGGCTTGGGTTCT+TGG - chr3.4:80956630-80956649 MS.gene84694:intron 50.0%
!!! AGGAGGGTTTTAGGGGGTTT+TGG - chr3.4:80954960-80954979 MS.gene84694:intron 50.0%
!!! AGGGTTTTAGGGGGTTTTGG+AGG - chr3.4:80954963-80954982 MS.gene84694:intron 50.0%
!!! GGGTTTTAGGGGGTTTTGGA+GGG - chr3.4:80954964-80954983 MS.gene84694:intron 50.0%
AATGGGAGAGGAGGGCTTTG+GGG - chr3.4:80954875-80954894 MS.gene84694:intron 55.0%
CCTGATTCTCATCAGCAGCC+AGG + chr3.4:80958848-80958867 None:intergenic 55.0%
CCTGGCTGCTGATGAGAATC+AGG - chr3.4:80958845-80958864 MS.gene84694:intron 55.0%
GCAAGAACAATGGCGAGTGC+AGG - chr3.4:80955808-80955827 MS.gene84694:intron 55.0%
GCCATCAACGACCACACCTT+TGG + chr3.4:80953478-80953497 None:intergenic 55.0%
GGCAACTCAGCATCTCTGTC+CGG - chr3.4:80958873-80958892 MS.gene84694:intron 55.0%
GGCGTCGCCATTGTGCTTAA+CGG - chr3.4:80953639-80953658 MS.gene84694:CDS 55.0%
GGGATTTCTTGTGCAGGACC+AGG + chr3.4:80958915-80958934 None:intergenic 55.0%
GTGATCGAAGCTCGGACGTT+TGG + chr3.4:80958589-80958608 None:intergenic 55.0%
GTTTGCGAGTTTGGAGGGGA+AGG - chr3.4:80954801-80954820 MS.gene84694:intron 55.0%
TAAAGGAGTGGCGGTGGGAT+GGG - chr3.4:80955562-80955581 MS.gene84694:intron 55.0%
TTAAAGGAGTGGCGGTGGGA+TGG - chr3.4:80955561-80955580 MS.gene84694:intron 55.0%
! CACTCTCACAGGATTGGCAG+AGG + chr3.4:80957869-80957888 None:intergenic 55.0%
! CTCACAGGATTGGCAGAGGT+AGG + chr3.4:80957865-80957884 None:intergenic 55.0%
!! ATACTACAGGGGCGCTGTTG+GGG - chr3.4:80958542-80958561 MS.gene84694:intron 55.0%
!! CATACTACAGGGGCGCTGTT+GGG - chr3.4:80958541-80958560 MS.gene84694:intron 55.0%
CGAGTTTGGAGGGGAAGGGA+GGG - chr3.4:80954806-80954825 MS.gene84694:intron 60.0%
GAGCGAGGTGTGATTGACGC+AGG - chr3.4:80956543-80956562 MS.gene84694:intron 60.0%
GAGTTTGGAGGGGAAGGGAG+GGG - chr3.4:80954807-80954826 MS.gene84694:intron 60.0%
GGGACACTGCTGGCCAAGAA+CGG - chr3.4:80956025-80956044 MS.gene84694:intron 60.0%
! ATGGGAGAGGAGGGCTTTGG+GGG - chr3.4:80954876-80954895 MS.gene84694:intron 60.0%
! GCTCAGATCTGGGACACTGC+TGG - chr3.4:80956015-80956034 MS.gene84694:intron 60.0%
!! GCATACTACAGGGGCGCTGT+TGG - chr3.4:80958540-80958559 MS.gene84694:intron 60.0%
!! TGGTTGGTGGGGTCCCAAGA+AGG + chr3.4:80955651-80955670 None:intergenic 60.0%
GCAGCGTGCAGTACCCACAG+AGG - chr3.4:80958695-80958714 MS.gene84694:intron 65.0%
GCGAGTTTGGAGGGGAAGGG+AGG - chr3.4:80954805-80954824 MS.gene84694:intron 65.0%
GGGAAGGGAGGGGAAGGCTT+GGG - chr3.4:80954817-80954836 MS.gene84694:intron 65.0%
TTGGAGGGGAAGGGAGGGGA+AGG - chr3.4:80954811-80954830 MS.gene84694:intron 65.0%
! GGGCGCTGTTGGGGCAATGT+TGG - chr3.4:80958551-80958570 MS.gene84694:intron 65.0%
!! TGGGAGAGGAGGGCTTTGGG+GGG - chr3.4:80954877-80954896 MS.gene84694:intron 65.0%
GGGGAAGGGAGGGGAAGGCT+TGG - chr3.4:80954816-80954835 MS.gene84694:intron 70.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 80953420 80958959 80953420 ID=MS.gene84694
chr3.4 mRNA 80953420 80958959 80953420 ID=MS.gene84694.t1;Parent=MS.gene84694
chr3.4 exon 80958875 80958959 80958875 ID=MS.gene84694.t1.exon1;Parent=MS.gene84694.t1
chr3.4 CDS 80958875 80958959 80958875 ID=cds.MS.gene84694.t1;Parent=MS.gene84694.t1
chr3.4 exon 80958719 80958787 80958719 ID=MS.gene84694.t1.exon2;Parent=MS.gene84694.t1
chr3.4 CDS 80958719 80958787 80958719 ID=cds.MS.gene84694.t1;Parent=MS.gene84694.t1
chr3.4 exon 80956333 80956549 80956333 ID=MS.gene84694.t1.exon3;Parent=MS.gene84694.t1
chr3.4 CDS 80956333 80956549 80956333 ID=cds.MS.gene84694.t1;Parent=MS.gene84694.t1
chr3.4 exon 80953420 80953858 80953420 ID=MS.gene84694.t1.exon4;Parent=MS.gene84694.t1
chr3.4 CDS 80953420 80953858 80953420 ID=cds.MS.gene84694.t1;Parent=MS.gene84694.t1
Gene Sequence

>MS.gene84694

ATGCAGCTGTCGTGTGGGTGTTGCGCTCGCCTCATTGTCACACCACCTCAACACTCCAAAGGTGTGGTCGTTGATGGCATTTATGGTTTGTGCTTTTACATGCCTATTCTTTCCTCCATTTGTTGTCGTTGTTGGGATCTTGGAGAGTTGAGCTGATATGTGATCATTTTAGAGATAGTTCACCACCACTTCTACGATGGTTATGGGTATGGTTATTTTGGCGTCGCCATTGTGCTTAACGGTGATAACGTTTTGTGACTTCCTTCAATGTCGTCTTACTTCGTTGGATGTTTAAGATATGGTTTTCTAGTTTTGGTTACCCTCAAACTTCCCATGCCTTTGGTTCATTGACGTTGTTGGTGTGTTTGGTTCGTGTTCCTTCTCTTTAATTCTCTAATTGTGTTCCATATGTTGAGAATTGCAGATTTCAAGGTAAAATTAATGAAAGTCGGAGTTTATAAATTAGGGTTAATAGATCTTTACCCCCTGTAATATAGGCCATTTCCGGTTTTTCCCCTGTAATTTTTTTTTGATTTACCCCCTGTAAAAAAAAATTTGTTTTGATTTACCCCCAATAGGCCAAACAAAAACGAAAATTTCTTGAAAAAAAATAAAATTGATTTTTGTTTGGCCTATTGGGGGTAAATCAAAACAAATTTTTTTTACAGGGGGTAGAACAAAAAAAAAATTTACAGGAGGAAAACCGGAAATGACTTATATTACAGGGGGATAAAGACCTATTAATCCTATAAATTATTCACAAATTTAAGGTTAGTTAACACAAATTTGAACTTAAAAGTTAATAAAACCGTGCGTAGGAAAATTTATATGACGGAAACATATAATTTTTTTACTAGGACTAAAAATGAAACTTGTTTTATTTACATGGATCAAAAACTTATTTAATTTTATTTTTTTGGTATTTAACCTTATTTTTAACTATCATACGAACGAGCATTTGTTAGAAGATATTTTTTTCCCTCAAAAAAGATGATATTTTTTTCCTACAAATAAAGATATTCATTAACTTGCTTAAGTTGATATAGTCACATATTGTTCAGAACCTTTAACTGTGCTCCTTTCAAAGTCTTTCGATTTTCGTGATGTCCTTTTAAAGTTGGTATAAAATTTTAAATAGTTTTGCTAATTTAGGACACTTGCTAACGATTAAAAAAATAGAATAATTAATAACTTTTATGCAAAAAAAAAATTACTTTTTAATATTTTAATGTATTAAATATAAAAAATTTAAGATAAAAATTTTACTTTAAACTTTTTTATTTAAATTTGACTTAATTGCATGTTTAATCCCCTATGTTTATTCTAGGTTTCAAGTTGGTTCCTTACGTTTTAAAAATTTTAAGTTGGTCCCTTAGACTTTGTTTGCGAGTTTGGAGGGGAAGGGAGGGGAAGGCTTGGGAAAAAATGAATGAGCAAGTGGAAGAAATAGAGGAAAATGGGAGAGGAGGGCTTTGGGGGGTTAACTTTTCTTCATAATACAAAACCCTCCTCATTTGGAGGAACTAAAAAATTGTATTGGAGGAGGGTTTTAGGGGGTTTTGGAGGGTTAATAAGAATTCTTCAAATTTTATTTATGTTGTTATAATATTTTTAAAATTAAAAATAAAGTAATCATATGCATTAACTTATCATTCTCTAAAAAACTACACTTTTAAAAAATTTGTAAGATTTCTCTATTTTTCTTCATATTTTGCACCCCTCAAAGCCTTTCCTTTTCTTTCCCTCCAAACTCGCAAACAAAGCCTTATGTTTTAACATTTTCAAGTTGGTTCAAAACGTTATTGCATAAAATAAGTTAGTCTCTTTCACCACTTAATCGTTCAAAGATTCGAGTTGACAATACATGTGATGAAACTTAACTTATTTTGGAAAATTATTTTTAAAACATTTTTTAATTTTTTTGGTTTTATTAAACTCAATATCATGTGGCGGAAGAGACTAACTTATTACAATGTAAGTAACATTTTAGACCGACTTAAAACCTTTAAAACGCAAATGAACAACTTAAAATTTTTAAAACATAAATGACCAACTTAAAATATAAAATAAAACATAAGGGATTCAAGAGGTAATTAAGCTTTTTAAATTTCTTTTCAAGTTTCTTTTAACATTTCTCAATTTTAAAGGAGTGGCGGTGGGATGGGTCCGAGTTAAAAACAAAAAAAAAAAAAAACTAATCTATTGTTTCCTCCGGTTTCAACTTTCAACCTTCTTGGGACCCCACCAACCAATAATCACCCGCAACCTGTCATAAATCACTTTTTGACATTAACACCACTCCACTTTTCAAACCAAATTCAAACCCGCTAATTAAACTACTCAATTAACCCAACTCTACATTCAAAATCGAAAACCAAGAAATCAAAAGCAAGAACAATGGCGAGTGCAGGTTACGGTGATGCAAACCAGAAGATAGACTACGTCTTCAAGGTGGTTCTAATCGGTGATTCTGCAGTCGGAAAATCTCAGATACTAGCTCGGTTTGCAAGAAACGACTTCAGCGTGGACTCAAAAGCTACAATCGGTGTTGAGTTTCAAACTCGTACTTTGGTTATTGAACATAAGAGTGTTAAGGCTCAGATCTGGGACACTGCTGGCCAAGAACGGTTCTCTTCTTTCTCTGCACTTTTTCGTTTTGCTATGCTTTCTTTTTTCTAGATCTTATTTTTTTTTTCTTTGATTTTGATTTTAGATTTACTTATTGAGTTCAATGTTGTAGAGATCTAGTTTCATGTTAGTTGTGAAGTTTATTTATCTGAAGTTAATGGTCAAATTAAGTTCAATTTTACTGTTTTCAACTTTAGAGATCAATTTTTTTGAGCAAGAAAGCTTAACACACAAAAAATGAGCTCAACACCAATTTTTTTTATTGAGGAATAAGATTGAGCTCAGACCTCGAGTCAACATCAGTCAAATTAATTCAAGGATGTGTCAAATGCATTTGACTTTTGACCAATCTTGAATTTGTTTGACACATACTTGAATTAGTTTGACTGATGTTGACTCGAGGTTGGAGCTCAATTTTAAACGTCATTGCTGTAACTGATCTTCTTGTTTATTGTTTTTGCCTATGGTTTCTTTGGGATGAGTTTGAGTGTGTATGAGCGAGGTGTGATTGACGCAGGATTTAAGTAAGAAAAGGAATAAGAGACTAGTACTCAAATTAATCTAGTATGTGAATTAACCCATTTAGGGTTGGCTTGGGTTCTTGGATTAGATACCGAATTTAAAAAAAAAAAAATCTAGTATGTGAATGGAATTGAAATCTAGTTAGCAGATTTATGAAATTTACGAGGGGATAAAGAATAGTCTATATAAATGAAATTGATCACAAGTAGAAATATTACAGTTTGCATGCTCTTTAATCGGCATATTTGAACTTCAGTGGTGTCTAAGTAATCTTTTTGCACTTTCATAGTCCATATAGTATGCTAATAGTGGTTTGATAACAATAACTTAACAGAAACCTTAGCAATGATTCCTTTGAACTTATGGTAAAATCATCCGGTTTCAAATCAAAATATGGTTTACTCTTGTCCTCATTCATGTCGAATGCATACTGCCTGACTTAACTCAGGTGACATGTATTGACCGATTTCAATTGGCCAAATCTGTGGACTTGTATAACGAGAGATGCTGTGCCACATTCCAGTTTTAAATTTGATATAATTGCCATGTTAGAAATGCTACCAACACACTATGTATATGAACAATCATCGAAAATGTGTTATTGCTAGAATTTCTCTTGCAATATGTGTACTGCAACTTTATGTTTTGCATTTACTTGAATGACACGTGTGGTTGGATTTCATACGTCACAAGGATTAAAACTGATTATTTATAGAGCAGTTAGGAAGACATTGATGGGAAATGGATTTGGAAGTTGGGAGAAAATGGGAAGAAAAACATAAATTTTATGGAGAGTGATCCTACTCTGCAGTCTGTATCGCTGAATTGATAATAGTTGTAAAGAGAAGAAGGAATCTAAAATGTATGTTGCTTAAACAAAGCTGGGTCAGAAAGTAAAAAGAACGGGAAGAGAAAGCAATGTGTTTGTTTAGCATAACTCCTCCCAACAGCTAGGAGTTACTGAGATTTCAGGGTCATGAGTGTGTAAAATGAGTGTTTCTTTCGCAGCCCATGAATAAATGATTTGGTTCCTCCAAAGTGAGTAATCAGTAAATTGAGAAAATCAATGGTTGATATTTTAACCACCCATGATTTATCATGCATGTGCATATATTATAATATCGACCAAATATTTATTTATCAACAGTTGATATTACTCATTTTACCCTCTACAGTGAGTTGCTCACAATAGAGGATCCTGATCCAGCAATAAATTAGAGTCTTGCCTTTCCCTCTAAACACAACTACCGCTAAACTGAATCCCCTATTGTTCTCTCCACACATCCTTATAACCTACCTCTGCCAATCCTGTGAGAGTGCTATCTGGTCTGCTACTAACTAGTTGCAACTGTTAACCAACTCTAACTCCCTTAAGTAACAGATACTTGCTCAGCTGGCCAAACACTCACCCATTTCTCCCTACAAGTATTTCCTTTCTGGCTGTGTGCTTACAGACATTGGGAACACATTTTTTTCTCAATTATTACTTAGATATCATCATTGTCCAGTATGCTAGTATCACAGAATCCTTAGTGTACAACTCATGCACCCTGTTAATATGTACAAAAGGTTCACACTTGTGTGTATACTGCAGCACATTTAATTTGAAAATTACCACTCTTTGAAATAAAAATCATCACTCTCTATATCAATTCAGTTCAATCCTTTGAAAACGTGTTATTGATAAGTATTTTCAAAATCAGCAATTTTGGCTGATTATTTTTCTGTCTTGGGAAAGTTGATTTAGTCTTAAAGTCATTGCCCATGTTTTTTTACTCAACCAATGTTCTTCAATCTGGTGAGTTTTGTACTATTTTTTCTACGGTTTATTCATAACTTTATATCAAGTATACTTCTGATCATTTCATCAGGGCACCAATATTTAAATTACAAGTACATCGAATGGTGATTGCAGTTTTGTCTGATTTTATAAATGGTTCATTCTCTACAGATATAGAGCAGTTACAAGTGCATACTACAGGGGCGCTGTTGGGGCAATGTTGGTTTATGACATTACCAAACGTCCGAGCTTCGATCACATACCTAGATGGTTAGAAGAACTGCGCAACCATGCTGACAAGAATATAGTCATCATTCTTATAGGAAACAAAAGTGATCTTGAGGAGCAGCGTGCAGTACCCACAGAGGATGCAAAAGAATTTGCTGAGAAAGAAGGCTTATTTTTCTTAAAGACCTCTGCGCTGCAAGCAACTAATGTTGAGACGGCCTTCATGACTGTTTTGACAGAAATATTTAACATTGTCAACAAGAAGAACCTGGCTGCTGATGAGAATCAGGGAAATGGCAACTCAGCATCTCTGTCCGGCAAGAAGATTATTGTTCCTGGTCCTGCACAAGAAATCCCTAAGAAGAGCATGTGTTGTCAGTAA
Protein sequence

>MS.gene84694.t1

MQLSCGCCARLIVTPPQHSKGVVVDGIYEIVHHHFYDGYGYGYFGVAIVLNGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSVDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLKTSALQATNVETAFMTVLTEIFNIVNKKNLAADENQGNGNSASLSGKKIIVPGPAQEIPKKSMCCQ