Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22723.t1 | RHN49575.1 | 95.2 | 228 | 11 | 0 | 1 | 228 | 1 | 228 | 2.90E-116 | 427.9 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22723.t1 | Q9LNK1 | 68.6 | 239 | 62 | 4 | 1 | 228 | 1 | 237 | 1.6e-83 | 310.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22723.t1 | A0A396HE47 | 95.2 | 228 | 11 | 0 | 1 | 228 | 1 | 228 | 2.1e-116 | 427.9 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22723.t1 | MTR_7g117910 | 82.895 | 228 | 23 | 2 | 1 | 228 | 1 | 212 | 4.68e-135 | 378 |
MS.gene22723.t1 | MTR_8g027220 | 82.326 | 215 | 36 | 1 | 14 | 228 | 20 | 232 | 2.14e-131 | 369 |
MS.gene22723.t1 | MTR_8g089985 | 65.403 | 211 | 70 | 2 | 15 | 223 | 12 | 221 | 6.13e-97 | 282 |
MS.gene22723.t1 | MTR_3g086980 | 65.700 | 207 | 68 | 2 | 15 | 219 | 11 | 216 | 3.60e-96 | 280 |
MS.gene22723.t1 | MTR_0262s0050 | 67.010 | 194 | 62 | 1 | 16 | 207 | 11 | 204 | 4.25e-91 | 267 |
MS.gene22723.t1 | MTR_1g052475 | 64.286 | 196 | 67 | 1 | 15 | 207 | 10 | 205 | 1.31e-90 | 266 |
MS.gene22723.t1 | MTR_2g005510 | 59.346 | 214 | 84 | 1 | 14 | 227 | 9 | 219 | 1.41e-88 | 261 |
MS.gene22723.t1 | MTR_2g075950 | 54.630 | 216 | 94 | 1 | 12 | 227 | 5 | 216 | 2.88e-83 | 247 |
MS.gene22723.t1 | MTR_2g014990 | 55.251 | 219 | 94 | 2 | 10 | 228 | 3 | 217 | 1.05e-82 | 246 |
MS.gene22723.t1 | MTR_4g088090 | 54.795 | 219 | 95 | 2 | 10 | 228 | 3 | 217 | 2.89e-82 | 244 |
MS.gene22723.t1 | MTR_4g064897 | 56.373 | 204 | 89 | 0 | 10 | 213 | 2 | 205 | 3.60e-82 | 244 |
MS.gene22723.t1 | MTR_4g079350 | 53.881 | 219 | 97 | 2 | 10 | 228 | 3 | 217 | 1.38e-81 | 243 |
MS.gene22723.t1 | MTR_3g069510 | 56.500 | 200 | 87 | 0 | 10 | 209 | 2 | 201 | 4.69e-81 | 241 |
MS.gene22723.t1 | MTR_2g083860 | 59.669 | 181 | 73 | 0 | 12 | 192 | 5 | 185 | 8.67e-79 | 236 |
MS.gene22723.t1 | MTR_2g090865 | 54.930 | 213 | 91 | 3 | 15 | 227 | 6 | 213 | 2.15e-78 | 234 |
MS.gene22723.t1 | MTR_8g036220 | 51.327 | 226 | 105 | 2 | 5 | 226 | 1 | 225 | 1.33e-77 | 233 |
MS.gene22723.t1 | MTR_1g078200 | 60.000 | 175 | 70 | 0 | 18 | 192 | 12 | 186 | 5.08e-75 | 226 |
MS.gene22723.t1 | MTR_7g405790 | 51.923 | 208 | 97 | 1 | 19 | 226 | 14 | 218 | 6.90e-73 | 221 |
MS.gene22723.t1 | MTR_7g051940 | 51.905 | 210 | 94 | 2 | 19 | 228 | 12 | 214 | 6.05e-71 | 216 |
MS.gene22723.t1 | MTR_6g079550 | 48.198 | 222 | 103 | 2 | 10 | 227 | 2 | 215 | 4.40e-70 | 214 |
MS.gene22723.t1 | MTR_8g107070 | 53.125 | 192 | 90 | 0 | 15 | 206 | 9 | 200 | 3.50e-65 | 203 |
MS.gene22723.t1 | MTR_8g031870 | 52.147 | 163 | 78 | 0 | 19 | 181 | 5 | 167 | 7.48e-59 | 184 |
MS.gene22723.t1 | MTR_8g031660 | 51.497 | 167 | 81 | 0 | 19 | 185 | 5 | 171 | 9.29e-58 | 182 |
MS.gene22723.t1 | MTR_2g027660 | 47.514 | 181 | 95 | 0 | 19 | 199 | 5 | 185 | 1.09e-57 | 182 |
MS.gene22723.t1 | MTR_8g031680 | 50.000 | 170 | 85 | 0 | 19 | 188 | 5 | 174 | 3.03e-56 | 178 |
MS.gene22723.t1 | MTR_6g021790 | 50.000 | 164 | 82 | 0 | 18 | 181 | 4 | 167 | 9.37e-56 | 177 |
MS.gene22723.t1 | MTR_2g005500 | 45.263 | 190 | 103 | 1 | 18 | 207 | 7 | 195 | 6.51e-55 | 174 |
MS.gene22723.t1 | MTR_8g031830 | 49.701 | 167 | 83 | 1 | 19 | 184 | 5 | 171 | 8.64e-54 | 171 |
MS.gene22723.t1 | MTR_8g006970 | 43.878 | 196 | 107 | 2 | 18 | 212 | 20 | 213 | 8.27e-53 | 169 |
MS.gene22723.t1 | MTR_7g081700 | 43.077 | 195 | 109 | 1 | 18 | 212 | 6 | 198 | 8.95e-53 | 169 |
MS.gene22723.t1 | MTR_1g068730 | 40.887 | 203 | 114 | 2 | 12 | 213 | 7 | 204 | 2.58e-51 | 166 |
MS.gene22723.t1 | MTR_1g068740 | 40.887 | 203 | 114 | 2 | 12 | 213 | 7 | 204 | 5.40e-51 | 165 |
MS.gene22723.t1 | MTR_8g006970 | 48.171 | 164 | 85 | 0 | 18 | 181 | 6 | 169 | 5.92e-51 | 164 |
MS.gene22723.t1 | MTR_7g100020 | 41.146 | 192 | 107 | 2 | 18 | 208 | 13 | 199 | 5.82e-49 | 160 |
MS.gene22723.t1 | MTR_1g115325 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 2.26e-48 | 158 |
MS.gene22723.t1 | MTR_3g064390 | 42.945 | 163 | 93 | 0 | 22 | 184 | 12 | 174 | 7.26e-47 | 154 |
MS.gene22723.t1 | MTR_5g076590 | 42.593 | 162 | 93 | 0 | 22 | 183 | 12 | 173 | 4.58e-46 | 152 |
MS.gene22723.t1 | MTR_8g093740 | 42.188 | 192 | 105 | 4 | 8 | 197 | 1 | 188 | 5.97e-46 | 152 |
MS.gene22723.t1 | MTR_1g094220 | 42.941 | 170 | 92 | 2 | 22 | 190 | 33 | 198 | 1.36e-45 | 150 |
MS.gene22723.t1 | MTR_2g102060 | 39.326 | 178 | 107 | 1 | 12 | 189 | 3 | 179 | 5.58e-45 | 149 |
MS.gene22723.t1 | MTR_2g096550 | 37.688 | 199 | 118 | 4 | 14 | 206 | 9 | 207 | 2.34e-44 | 148 |
MS.gene22723.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 4.11e-44 | 147 |
MS.gene22723.t1 | MTR_8g103550 | 40.120 | 167 | 100 | 0 | 22 | 188 | 11 | 177 | 4.15e-44 | 147 |
MS.gene22723.t1 | MTR_1g029450 | 40.513 | 195 | 113 | 3 | 16 | 208 | 13 | 206 | 5.01e-44 | 147 |
MS.gene22723.t1 | MTR_3g096350 | 41.451 | 193 | 106 | 5 | 8 | 198 | 1 | 188 | 6.41e-44 | 147 |
MS.gene22723.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 8.36e-44 | 146 |
MS.gene22723.t1 | MTR_4g099470 | 43.558 | 163 | 88 | 2 | 51 | 212 | 15 | 174 | 1.11e-43 | 145 |
MS.gene22723.t1 | MTR_1g094220 | 44.156 | 154 | 85 | 1 | 22 | 174 | 33 | 186 | 1.60e-43 | 146 |
MS.gene22723.t1 | MTR_4g063160 | 42.012 | 169 | 95 | 2 | 18 | 183 | 13 | 181 | 2.63e-43 | 145 |
MS.gene22723.t1 | MTR_7g103070 | 45.062 | 162 | 87 | 2 | 18 | 177 | 14 | 175 | 3.05e-43 | 145 |
MS.gene22723.t1 | MTR_1g062760 | 44.444 | 171 | 92 | 3 | 18 | 186 | 12 | 181 | 1.90e-42 | 143 |
MS.gene22723.t1 | MTR_1g068730 | 44.444 | 135 | 75 | 0 | 9 | 143 | 4 | 138 | 5.95e-42 | 140 |
MS.gene22723.t1 | MTR_1g068740 | 44.604 | 139 | 76 | 1 | 9 | 146 | 4 | 142 | 9.28e-42 | 140 |
MS.gene22723.t1 | MTR_5g013900 | 39.490 | 157 | 95 | 0 | 21 | 177 | 10 | 166 | 2.92e-41 | 140 |
MS.gene22723.t1 | MTR_4g098950 | 39.490 | 157 | 95 | 0 | 21 | 177 | 10 | 166 | 7.19e-41 | 139 |
MS.gene22723.t1 | MTR_3g087160 | 37.580 | 157 | 98 | 0 | 21 | 177 | 10 | 166 | 3.55e-40 | 137 |
MS.gene22723.t1 | MTR_8g090215 | 37.580 | 157 | 98 | 0 | 21 | 177 | 10 | 166 | 1.10e-39 | 135 |
MS.gene22723.t1 | MTR_1g090717 | 43.678 | 174 | 95 | 3 | 18 | 188 | 13 | 186 | 4.78e-39 | 134 |
MS.gene22723.t1 | MTR_3g096350 | 43.662 | 142 | 74 | 5 | 8 | 145 | 1 | 140 | 1.87e-35 | 123 |
MS.gene22723.t1 | MTR_3g096350 | 46.617 | 133 | 67 | 4 | 8 | 138 | 1 | 131 | 2.50e-35 | 123 |
MS.gene22723.t1 | MTR_3g064390 | 42.969 | 128 | 73 | 0 | 22 | 149 | 12 | 139 | 1.64e-34 | 121 |
MS.gene22723.t1 | MTR_8g093740 | 43.243 | 148 | 79 | 3 | 51 | 196 | 10 | 154 | 1.80e-33 | 119 |
MS.gene22723.t1 | MTR_8g092020 | 38.650 | 163 | 93 | 3 | 20 | 175 | 12 | 174 | 9.49e-33 | 118 |
MS.gene22723.t1 | MTR_1g097420 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 7.03e-32 | 115 |
MS.gene22723.t1 | MTR_4g069850 | 38.889 | 162 | 92 | 3 | 20 | 174 | 8 | 169 | 4.04e-31 | 114 |
MS.gene22723.t1 | MTR_7g103070 | 45.763 | 118 | 62 | 2 | 62 | 177 | 2 | 119 | 2.86e-30 | 110 |
MS.gene22723.t1 | MTR_2g101890 | 37.654 | 162 | 94 | 3 | 20 | 174 | 10 | 171 | 3.38e-30 | 111 |
MS.gene22723.t1 | MTR_4g012940 | 37.654 | 162 | 94 | 3 | 20 | 174 | 8 | 169 | 7.55e-30 | 110 |
MS.gene22723.t1 | MTR_6g039490 | 36.196 | 163 | 97 | 3 | 20 | 175 | 8 | 170 | 1.21e-27 | 105 |
MS.gene22723.t1 | MTR_2g005500 | 33.158 | 190 | 86 | 2 | 18 | 207 | 7 | 155 | 1.99e-26 | 100 |
MS.gene22723.t1 | MTR_1g097420 | 35.152 | 165 | 98 | 4 | 18 | 175 | 35 | 197 | 4.51e-26 | 101 |
MS.gene22723.t1 | MTR_8g031810 | 43.269 | 104 | 45 | 1 | 19 | 122 | 5 | 94 | 6.08e-23 | 89.4 |
MS.gene22723.t1 | MTR_3g107717 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 6.36e-23 | 92.8 |
MS.gene22723.t1 | MTR_3g107713 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 6.64e-23 | 92.8 |
MS.gene22723.t1 | MTR_3g107707 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 6.85e-23 | 92.8 |
MS.gene22723.t1 | MTR_1g069245 | 47.368 | 95 | 46 | 2 | 33 | 127 | 109 | 199 | 5.03e-21 | 87.8 |
MS.gene22723.t1 | MTR_5g022600 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 1.16e-20 | 86.3 |
MS.gene22723.t1 | MTR_4g088055 | 36.364 | 121 | 74 | 3 | 22 | 141 | 8 | 126 | 1.13e-19 | 83.6 |
MS.gene22723.t1 | MTR_8g075240 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 1.13e-19 | 83.6 |
MS.gene22723.t1 | MTR_2g090875 | 31.515 | 165 | 99 | 5 | 22 | 174 | 8 | 170 | 2.52e-19 | 82.8 |
MS.gene22723.t1 | MTR_4g073250 | 36.975 | 119 | 72 | 3 | 22 | 139 | 8 | 124 | 5.93e-19 | 81.6 |
MS.gene22723.t1 | MTR_6g087980 | 37.190 | 121 | 73 | 3 | 22 | 141 | 8 | 126 | 1.02e-18 | 81.3 |
MS.gene22723.t1 | MTR_2g078000 | 65.306 | 49 | 17 | 0 | 81 | 129 | 46 | 94 | 1.79e-18 | 78.2 |
MS.gene22723.t1 | MTR_3g078260 | 33.333 | 165 | 96 | 5 | 22 | 174 | 10 | 172 | 4.66e-18 | 79.7 |
MS.gene22723.t1 | MTR_1452s0010 | 46.377 | 69 | 37 | 0 | 50 | 118 | 11 | 79 | 5.16e-17 | 74.3 |
MS.gene22723.t1 | MTR_3g078260 | 36.842 | 114 | 69 | 3 | 22 | 134 | 10 | 121 | 2.69e-16 | 73.6 |
MS.gene22723.t1 | MTR_1g059590 | 32.934 | 167 | 105 | 3 | 23 | 189 | 398 | 557 | 9.13e-16 | 76.3 |
MS.gene22723.t1 | MTR_1g059590 | 32.934 | 167 | 105 | 3 | 23 | 189 | 431 | 590 | 9.97e-16 | 75.9 |
MS.gene22723.t1 | MTR_4g113620 | 30.994 | 171 | 104 | 6 | 13 | 181 | 4 | 162 | 1.09e-15 | 73.6 |
MS.gene22723.t1 | MTR_1686s0010 | 35.714 | 84 | 54 | 0 | 48 | 131 | 9 | 92 | 7.39e-14 | 65.5 |
MS.gene22723.t1 | MTR_8g099250 | 51.724 | 58 | 28 | 0 | 5 | 62 | 1 | 58 | 1.59e-13 | 63.9 |
MS.gene22723.t1 | MTR_3g053480 | 49.180 | 61 | 31 | 0 | 5 | 65 | 1 | 61 | 1.83e-13 | 63.5 |
MS.gene22723.t1 | MTR_2g078560 | 58.696 | 46 | 19 | 0 | 82 | 127 | 54 | 99 | 2.13e-13 | 68.6 |
MS.gene22723.t1 | MTR_5g092060 | 29.193 | 161 | 104 | 3 | 21 | 174 | 105 | 262 | 1.52e-11 | 62.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene22723.t1 | AT1G01200 | 69.038 | 239 | 61 | 5 | 1 | 228 | 1 | 237 | 5.90e-115 | 328 |
MS.gene22723.t1 | AT5G65270 | 65.728 | 213 | 71 | 1 | 13 | 223 | 10 | 222 | 1.18e-101 | 294 |
MS.gene22723.t1 | AT4G39990 | 66.337 | 202 | 67 | 1 | 16 | 217 | 13 | 213 | 3.86e-96 | 280 |
MS.gene22723.t1 | AT3G12160 | 65.347 | 202 | 68 | 1 | 15 | 214 | 10 | 211 | 1.68e-94 | 276 |
MS.gene22723.t1 | AT5G47960 | 63.721 | 215 | 71 | 3 | 15 | 226 | 10 | 220 | 2.27e-93 | 273 |
MS.gene22723.t1 | AT1G09630 | 57.339 | 218 | 89 | 1 | 10 | 227 | 2 | 215 | 2.39e-90 | 265 |
MS.gene22723.t1 | AT4G18800 | 55.556 | 216 | 89 | 2 | 12 | 227 | 5 | 213 | 1.57e-83 | 248 |
MS.gene22723.t1 | AT5G45750 | 58.586 | 198 | 81 | 1 | 12 | 209 | 5 | 201 | 2.23e-82 | 245 |
MS.gene22723.t1 | AT1G07410 | 57.500 | 200 | 84 | 1 | 10 | 209 | 2 | 200 | 1.16e-81 | 243 |
MS.gene22723.t1 | AT5G60860 | 53.670 | 218 | 97 | 2 | 10 | 227 | 3 | 216 | 3.99e-81 | 242 |
MS.gene22723.t1 | AT5G59150 | 63.128 | 179 | 66 | 0 | 10 | 188 | 2 | 180 | 5.91e-81 | 241 |
MS.gene22723.t1 | AT1G16920 | 53.241 | 216 | 96 | 2 | 12 | 227 | 5 | 215 | 1.78e-80 | 240 |
MS.gene22723.t1 | AT3G15060 | 52.752 | 218 | 99 | 2 | 10 | 227 | 3 | 216 | 2.32e-80 | 240 |
MS.gene22723.t1 | AT4G18430 | 52.752 | 218 | 99 | 2 | 10 | 227 | 3 | 216 | 7.95e-80 | 238 |
MS.gene22723.t1 | AT3G46830 | 62.921 | 178 | 66 | 0 | 11 | 188 | 3 | 180 | 1.26e-79 | 238 |
MS.gene22723.t1 | AT3G46830 | 62.921 | 178 | 66 | 0 | 11 | 188 | 3 | 180 | 1.26e-79 | 238 |
MS.gene22723.t1 | AT1G06400 | 57.071 | 198 | 84 | 1 | 12 | 209 | 5 | 201 | 2.08e-79 | 237 |
MS.gene22723.t1 | AT1G28550 | 52.294 | 218 | 101 | 2 | 10 | 227 | 3 | 217 | 3.59e-79 | 237 |
MS.gene22723.t1 | AT2G33870 | 50.463 | 216 | 104 | 2 | 12 | 227 | 5 | 217 | 4.57e-77 | 231 |
MS.gene22723.t1 | AT5G47520 | 53.774 | 212 | 93 | 2 | 18 | 227 | 12 | 220 | 1.89e-75 | 228 |
MS.gene22723.t1 | AT3G07410 | 51.364 | 220 | 100 | 3 | 7 | 226 | 2 | 214 | 2.11e-72 | 219 |
MS.gene22723.t1 | AT1G05810 | 57.955 | 176 | 74 | 0 | 18 | 193 | 10 | 185 | 4.19e-72 | 219 |
MS.gene22723.t1 | AT2G43130 | 55.978 | 184 | 78 | 1 | 11 | 194 | 6 | 186 | 8.34e-72 | 218 |
MS.gene22723.t1 | AT1G05810 | 57.955 | 176 | 74 | 0 | 18 | 193 | 56 | 231 | 8.40e-72 | 219 |
MS.gene22723.t1 | AT1G73640 | 55.851 | 188 | 82 | 1 | 14 | 201 | 7 | 193 | 1.66e-71 | 218 |
MS.gene22723.t1 | AT2G31680 | 56.250 | 176 | 77 | 0 | 18 | 193 | 10 | 185 | 1.02e-70 | 215 |
MS.gene22723.t1 | AT1G18200 | 49.020 | 204 | 97 | 1 | 11 | 207 | 4 | 207 | 2.92e-67 | 207 |
MS.gene22723.t1 | AT4G17170 | 47.514 | 181 | 95 | 0 | 19 | 199 | 5 | 185 | 4.88e-58 | 183 |
MS.gene22723.t1 | AT4G35860 | 49.171 | 181 | 88 | 1 | 18 | 194 | 4 | 184 | 6.40e-58 | 182 |
MS.gene22723.t1 | AT4G17160 | 50.898 | 167 | 82 | 0 | 19 | 185 | 5 | 171 | 4.84e-56 | 177 |
MS.gene22723.t1 | AT3G11730 | 44.737 | 190 | 105 | 0 | 18 | 207 | 6 | 195 | 5.96e-55 | 175 |
MS.gene22723.t1 | AT4G17530 | 43.590 | 195 | 108 | 1 | 18 | 212 | 6 | 198 | 1.24e-52 | 169 |
MS.gene22723.t1 | AT5G47200 | 48.780 | 164 | 84 | 0 | 18 | 181 | 6 | 169 | 2.12e-52 | 168 |
MS.gene22723.t1 | AT1G02130 | 42.105 | 190 | 109 | 1 | 18 | 207 | 6 | 194 | 3.30e-52 | 167 |
MS.gene22723.t1 | AT5G59150 | 61.417 | 127 | 49 | 0 | 62 | 188 | 3 | 129 | 5.16e-52 | 166 |
MS.gene22723.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 2.87e-50 | 163 |
MS.gene22723.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 2.87e-50 | 163 |
MS.gene22723.t1 | AT3G46060 | 41.624 | 197 | 109 | 2 | 18 | 213 | 13 | 204 | 2.87e-50 | 163 |
MS.gene22723.t1 | AT5G59840 | 41.117 | 197 | 110 | 2 | 18 | 213 | 13 | 204 | 7.30e-50 | 162 |
MS.gene22723.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 3.20e-48 | 158 |
MS.gene22723.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 3.20e-48 | 158 |
MS.gene22723.t1 | AT3G53610 | 43.713 | 167 | 93 | 1 | 18 | 183 | 13 | 179 | 3.20e-48 | 158 |
MS.gene22723.t1 | AT3G09900 | 42.135 | 178 | 102 | 1 | 7 | 183 | 2 | 179 | 1.26e-47 | 156 |
MS.gene22723.t1 | AT3G54840 | 42.541 | 181 | 99 | 2 | 13 | 192 | 26 | 202 | 2.10e-47 | 155 |
MS.gene22723.t1 | AT3G54840 | 43.860 | 171 | 91 | 2 | 23 | 192 | 2 | 168 | 1.29e-46 | 152 |
MS.gene22723.t1 | AT4G19640 | 41.104 | 163 | 96 | 0 | 22 | 184 | 12 | 174 | 1.34e-46 | 153 |
MS.gene22723.t1 | AT5G03520 | 41.573 | 178 | 103 | 1 | 7 | 183 | 2 | 179 | 3.50e-46 | 152 |
MS.gene22723.t1 | AT3G54840 | 44.172 | 163 | 90 | 1 | 13 | 174 | 26 | 188 | 5.57e-46 | 151 |
MS.gene22723.t1 | AT5G45130 | 40.491 | 163 | 97 | 0 | 22 | 184 | 12 | 174 | 2.68e-45 | 150 |
MS.gene22723.t1 | AT5G45130 | 40.373 | 161 | 96 | 0 | 24 | 184 | 22 | 182 | 7.61e-44 | 146 |
MS.gene22723.t1 | AT1G43890 | 41.489 | 188 | 107 | 3 | 14 | 199 | 7 | 193 | 1.12e-43 | 146 |
MS.gene22723.t1 | AT1G43890 | 41.489 | 188 | 107 | 3 | 14 | 199 | 7 | 193 | 1.12e-43 | 146 |
MS.gene22723.t1 | AT1G43890 | 41.489 | 188 | 107 | 3 | 14 | 199 | 7 | 193 | 1.12e-43 | 146 |
MS.gene22723.t1 | AT4G35860 | 50.365 | 137 | 64 | 1 | 62 | 194 | 2 | 138 | 1.24e-43 | 144 |
MS.gene22723.t1 | AT5G10260 | 39.490 | 157 | 95 | 0 | 21 | 177 | 10 | 166 | 4.11e-42 | 142 |
MS.gene22723.t1 | AT2G44610 | 36.316 | 190 | 111 | 2 | 21 | 200 | 10 | 199 | 5.29e-41 | 139 |
MS.gene22723.t1 | AT5G03530 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 5.93e-40 | 136 |
MS.gene22723.t1 | AT5G03530 | 42.857 | 175 | 97 | 3 | 14 | 186 | 7 | 180 | 5.93e-40 | 136 |
MS.gene22723.t1 | AT2G22290 | 37.580 | 157 | 98 | 0 | 21 | 177 | 10 | 166 | 5.90e-39 | 134 |
MS.gene22723.t1 | AT4G39890 | 37.342 | 158 | 98 | 1 | 21 | 177 | 10 | 167 | 5.59e-38 | 132 |
MS.gene22723.t1 | AT3G09910 | 42.286 | 175 | 98 | 3 | 14 | 186 | 7 | 180 | 1.57e-37 | 130 |
MS.gene22723.t1 | AT3G09910 | 42.286 | 175 | 98 | 3 | 14 | 186 | 7 | 180 | 1.57e-37 | 130 |
MS.gene22723.t1 | AT3G09910 | 42.286 | 175 | 98 | 3 | 14 | 186 | 7 | 180 | 1.57e-37 | 130 |
MS.gene22723.t1 | AT3G09910 | 41.860 | 172 | 97 | 3 | 14 | 183 | 7 | 177 | 4.73e-37 | 129 |
MS.gene22723.t1 | AT3G09910 | 41.860 | 172 | 97 | 3 | 14 | 183 | 7 | 177 | 4.73e-37 | 129 |
MS.gene22723.t1 | AT5G64990 | 36.943 | 157 | 99 | 0 | 21 | 177 | 8 | 164 | 8.94e-37 | 128 |
MS.gene22723.t1 | AT4G19640 | 41.600 | 125 | 73 | 0 | 22 | 146 | 12 | 136 | 3.63e-35 | 122 |
MS.gene22723.t1 | AT5G03520 | 42.308 | 130 | 74 | 1 | 55 | 183 | 40 | 169 | 1.11e-34 | 123 |
MS.gene22723.t1 | AT4G19640 | 40.458 | 131 | 78 | 0 | 22 | 152 | 12 | 142 | 1.37e-34 | 122 |
MS.gene22723.t1 | AT5G64990 | 35.366 | 164 | 99 | 1 | 21 | 177 | 8 | 171 | 5.21e-34 | 121 |
MS.gene22723.t1 | AT1G52280 | 39.877 | 163 | 89 | 4 | 20 | 174 | 8 | 169 | 8.98e-32 | 115 |
MS.gene22723.t1 | AT3G18820 | 39.506 | 162 | 91 | 3 | 20 | 174 | 8 | 169 | 9.99e-32 | 115 |
MS.gene22723.t1 | AT4G09720 | 38.182 | 165 | 95 | 3 | 20 | 177 | 8 | 172 | 1.60e-31 | 115 |
MS.gene22723.t1 | AT1G22740 | 36.810 | 163 | 96 | 3 | 20 | 175 | 8 | 170 | 1.91e-31 | 114 |
MS.gene22723.t1 | AT2G21880 | 36.970 | 165 | 97 | 3 | 20 | 177 | 9 | 173 | 3.54e-31 | 114 |
MS.gene22723.t1 | AT4G09720 | 37.059 | 170 | 95 | 3 | 20 | 177 | 8 | 177 | 6.47e-31 | 113 |
MS.gene22723.t1 | AT1G49300 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 4.53e-30 | 111 |
MS.gene22723.t1 | AT1G49300 | 38.037 | 163 | 94 | 3 | 20 | 175 | 8 | 170 | 4.53e-30 | 111 |
MS.gene22723.t1 | AT4G09720 | 35.795 | 176 | 95 | 3 | 20 | 177 | 8 | 183 | 6.83e-30 | 110 |
MS.gene22723.t1 | AT3G16100 | 38.650 | 163 | 91 | 4 | 20 | 174 | 8 | 169 | 1.17e-29 | 110 |
MS.gene22723.t1 | AT5G39620 | 35.366 | 164 | 99 | 3 | 21 | 177 | 6 | 169 | 2.14e-26 | 101 |
MS.gene22723.t1 | AT5G55080 | 31.953 | 169 | 111 | 3 | 14 | 181 | 6 | 171 | 1.15e-24 | 97.4 |
MS.gene22723.t1 | AT5G55190 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 8.48e-23 | 92.4 |
MS.gene22723.t1 | AT5G20020 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 8.57e-23 | 92.4 |
MS.gene22723.t1 | AT2G21880 | 34.459 | 148 | 90 | 3 | 37 | 177 | 1 | 148 | 8.87e-23 | 91.7 |
MS.gene22723.t1 | AT2G21880 | 34.459 | 148 | 90 | 3 | 37 | 177 | 1 | 148 | 8.87e-23 | 91.7 |
MS.gene22723.t1 | AT5G20010 | 33.136 | 169 | 109 | 3 | 14 | 181 | 6 | 171 | 9.32e-23 | 92.4 |
MS.gene22723.t1 | AT5G46025 | 45.794 | 107 | 56 | 2 | 82 | 186 | 6 | 112 | 1.15e-22 | 89.4 |
MS.gene22723.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.84e-22 | 90.1 |
MS.gene22723.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.84e-22 | 90.1 |
MS.gene22723.t1 | AT4G09720 | 38.519 | 135 | 76 | 3 | 50 | 177 | 4 | 138 | 2.84e-22 | 90.1 |
MS.gene22723.t1 | AT2G21880 | 32.121 | 165 | 97 | 4 | 20 | 177 | 9 | 165 | 1.75e-21 | 88.6 |
MS.gene22723.t1 | AT2G44690 | 33.333 | 165 | 96 | 5 | 22 | 174 | 20 | 182 | 3.50e-21 | 88.2 |
MS.gene22723.t1 | AT1G75840 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 1.30e-20 | 86.3 |
MS.gene22723.t1 | AT1G20090 | 32.727 | 165 | 97 | 5 | 22 | 174 | 7 | 169 | 3.55e-20 | 85.1 |
MS.gene22723.t1 | AT4G35020 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 7.48e-20 | 84.3 |
MS.gene22723.t1 | AT4G35020 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 7.48e-20 | 84.3 |
MS.gene22723.t1 | AT4G35020 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 7.48e-20 | 84.3 |
MS.gene22723.t1 | AT3G51300 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 2.15e-19 | 83.2 |
MS.gene22723.t1 | AT4G35950 | 33.333 | 165 | 96 | 5 | 22 | 174 | 8 | 170 | 2.51e-19 | 82.8 |
MS.gene22723.t1 | AT2G17800 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 4.14e-19 | 82.4 |
MS.gene22723.t1 | AT2G17800 | 32.727 | 165 | 97 | 5 | 22 | 174 | 8 | 170 | 4.14e-19 | 82.4 |
MS.gene22723.t1 | AT4G28950 | 28.934 | 197 | 123 | 6 | 21 | 202 | 7 | 201 | 1.24e-18 | 81.3 |
MS.gene22723.t1 | AT3G48040 | 29.557 | 203 | 125 | 6 | 22 | 212 | 10 | 206 | 1.35e-17 | 78.6 |
MS.gene22723.t1 | AT5G45970 | 34.711 | 121 | 76 | 3 | 22 | 141 | 8 | 126 | 1.50e-17 | 78.2 |
MS.gene22723.t1 | AT5G62880 | 30.387 | 181 | 98 | 5 | 22 | 183 | 10 | 181 | 2.33e-17 | 78.2 |
MS.gene22723.t1 | AT3G48040 | 36.364 | 121 | 74 | 3 | 22 | 141 | 10 | 128 | 3.71e-17 | 76.6 |
MS.gene22723.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 22 | 134 | 8 | 119 | 8.17e-17 | 74.7 |
MS.gene22723.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 22 | 134 | 8 | 119 | 8.17e-17 | 74.7 |
MS.gene22723.t1 | AT5G62880 | 34.000 | 150 | 87 | 5 | 22 | 170 | 10 | 148 | 8.38e-17 | 75.9 |
MS.gene22723.t1 | AT4G07524 | 66.667 | 33 | 11 | 0 | 44 | 76 | 2 | 34 | 4.74e-11 | 57.4 |
Find 46 sgRNAs with CRISPR-Local
Find 89 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAAAATAGATTATGTGTTTA+AGG | 0.114114 | 7.4:-733081 | MS.gene22723:CDS |
AACAATGTTGCTACACTTAA+AGG | 0.136675 | 7.4:-731627 | MS.gene22723:CDS |
ACTAGAACTGTCACAATTAA+TGG | 0.238881 | 7.4:-732951 | MS.gene22723:CDS |
CTTCCGTGTGCACCACTCTT+TGG | 0.290440 | 7.4:+731799 | None:intergenic |
ATTAGATTCTAACGACCTTT+TGG | 0.294249 | 7.4:+731659 | None:intergenic |
GGAAGAAAAGTAACCTTTCT+TGG | 0.296374 | 7.4:+732892 | None:intergenic |
ATTGCTTGAAGAGATTAATA+AGG | 0.303173 | 7.4:-731688 | MS.gene22723:CDS |
TCCATCGTCGTCATGCTAAT+TGG | 0.307865 | 7.4:-731843 | MS.gene22723:CDS |
GCATACTACAGAGGAGCATT+AGG | 0.316511 | 7.4:-731954 | MS.gene22723:CDS |
TCGAAAATAGATATAATTTC+AGG | 0.332950 | 7.4:-731603 | MS.gene22723:CDS |
AACTCATCAAAGCTCAGATC+TGG | 0.360411 | 7.4:-732926 | MS.gene22723:CDS |
CGTTTGATCATGTAGCTAGA+TGG | 0.371088 | 7.4:-731896 | MS.gene22723:CDS |
TGTGGAGTTTGCAGAGGATC+AGG | 0.380249 | 7.4:-731772 | MS.gene22723:CDS |
CATACTACAGAGGAGCATTA+GGG | 0.398256 | 7.4:-731953 | MS.gene22723:CDS |
GTGTTTAAGGTTGTTGTGAT+TGG | 0.414253 | 7.4:-733068 | MS.gene22723:CDS |
TTGATCGAAGAAAATGAATC+AGG | 0.424173 | 7.4:-733138 | None:intergenic |
ACAATGTTGCTACACTTAAA+GGG | 0.474727 | 7.4:-731626 | MS.gene22723:CDS |
TTTGACTCAAAATCAACCAT+TGG | 0.498039 | 7.4:-732987 | MS.gene22723:CDS |
TTAATAAGGTTGTCTCCAAA+AGG | 0.501126 | 7.4:-731674 | MS.gene22723:CDS |
CATGACGACGATGGAGTTGT+CGG | 0.508461 | 7.4:+731851 | None:intergenic |
GGGATACTGCTGGCCAAGAA+AGG | 0.510670 | 7.4:-732905 | MS.gene22723:intron |
AGGAGCATTAGGGGCCATGC+TGG | 0.520247 | 7.4:-731943 | MS.gene22723:CDS |
AGTCTGAAATTCAACTCCAA+TGG | 0.545485 | 7.4:+732971 | None:intergenic |
GTGGAGTTTGCAGAGGATCA+GGG | 0.547643 | 7.4:-731771 | MS.gene22723:CDS |
ACTCATCAAAGCTCAGATCT+GGG | 0.560858 | 7.4:-732925 | MS.gene22723:CDS |
GAAAGACTCAAATGCTGTCA+AGG | 0.561718 | 7.4:-733031 | MS.gene22723:CDS |
TCTGAGACTTCAGCGTTCAG+TGG | 0.562534 | 7.4:-731738 | MS.gene22723:CDS |
GCTCAGATCTGGGATACTGC+TGG | 0.566767 | 7.4:-732915 | MS.gene22723:CDS |
TGGTAACAAAGGTGATCTTG+TGG | 0.577617 | 7.4:-731823 | MS.gene22723:CDS |
TCATGTAGCTAGATGGATTG+AGG | 0.580303 | 7.4:-731889 | MS.gene22723:CDS |
AAAATGAATCAGGAAATGAA+TGG | 0.586232 | 7.4:-733128 | MS.gene22723:CDS |
ACCAATTAGCATGACGACGA+TGG | 0.601530 | 7.4:+731842 | None:intergenic |
GTCATGCTAATTGGTAACAA+AGG | 0.622802 | 7.4:-731834 | MS.gene22723:CDS |
AGTTATGTCATACACCAGCA+TGG | 0.629305 | 7.4:+731929 | None:intergenic |
GGTGCACACGGAAGATGCTG+TGG | 0.634616 | 7.4:-731790 | MS.gene22723:CDS |
CTAGATCAACAAGAACATGA+AGG | 0.637055 | 7.4:+731546 | None:intergenic |
GAATCAGGAAATGAATGGTG+TGG | 0.639083 | 7.4:-733123 | MS.gene22723:CDS |
GGACCAAAGAGTGGTGCACA+CGG | 0.641793 | 7.4:-731802 | MS.gene22723:CDS |
GTGATTGGTGACTCAGCAGT+AGG | 0.649343 | 7.4:-733053 | MS.gene22723:CDS |
AGATGCTGTGGAGTTTGCAG+AGG | 0.660975 | 7.4:-731778 | MS.gene22723:CDS |
ATACTACAGAGGAGCATTAG+GGG | 0.672037 | 7.4:-731952 | MS.gene22723:CDS |
TGAATGGTGTGGAAGCTGAA+AGG | 0.673720 | 7.4:-733112 | MS.gene22723:CDS |
CTAGATGGATTGAGGAACTG+CGG | 0.688972 | 7.4:-731881 | MS.gene22723:CDS |
TGATCTTGTGGACCAAAGAG+TGG | 0.691658 | 7.4:-731811 | MS.gene22723:CDS |
GTTACAAGTGCATACTACAG+AGG | 0.706445 | 7.4:-731963 | MS.gene22723:CDS |
ATAATAATATAGGTACAGAG+CGG | 0.790789 | 7.4:-731985 | MS.gene22723:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GCTAAAAATATAAAAAATAA+AGG | - | chr7.4:732340-732359 | MS.gene22723:intron | 10.0% |
!!! | AACTAAAGTTTTTTTTTTAT+AGG | + | chr7.4:732413-732432 | None:intergenic | 10.0% |
!! | GATTTAGTTAGTAAAAAATT+TGG | - | chr7.4:732138-732157 | MS.gene22723:intron | 15.0% |
!!! | TTTTCATTAAGAAAATTTAC+AGG | - | chr7.4:732544-732563 | MS.gene22723:intron | 15.0% |
!! | ACAGAAATTTATTAATCACT+TGG | + | chr7.4:732207-732226 | None:intergenic | 20.0% |
!! | ACCTATAAATTAACATAATC+AGG | + | chr7.4:732366-732385 | None:intergenic | 20.0% |
!! | ATAATATAAAAGACATGTCT+CGG | - | chr7.4:732633-732652 | MS.gene22723:intron | 20.0% |
!! | CAGAAATTTATTAATCACTT+GGG | + | chr7.4:732206-732225 | None:intergenic | 20.0% |
!! | CTAAAAAAAGTTAAAAGTGA+TGG | + | chr7.4:731830-731849 | None:intergenic | 20.0% |
!! | CTAAATATGGCAATTATAAT+AGG | + | chr7.4:731978-731997 | None:intergenic | 20.0% |
!! | GAAAATAGATTATGTGTTTA+AGG | - | chr7.4:731595-731614 | MS.gene22723:CDS | 20.0% |
!! | GAAAATTGGTCATAATAATT+CGG | + | chr7.4:732294-732313 | None:intergenic | 20.0% |
!! | TCGAAAATAGATATAATTTC+AGG | - | chr7.4:733073-733092 | MS.gene22723:CDS | 20.0% |
!!! | TTTTTTTTGTCTAAAGTTTG+TGG | + | chr7.4:731940-731959 | None:intergenic | 20.0% |
! | ATAATAATATAGGTACAGAG+CGG | - | chr7.4:732691-732710 | MS.gene22723:intron | 25.0% |
! | ATTGCTTGAAGAGATTAATA+AGG | - | chr7.4:732988-733007 | MS.gene22723:CDS | 25.0% |
! | CAATTAGAGAAACATCTAAT+TGG | + | chr7.4:732481-732500 | None:intergenic | 25.0% |
! | CTTACTATAATTGCCATATT+TGG | - | chr7.4:731897-731916 | MS.gene22723:CDS | 25.0% |
! | GCCTGATTATGTTAATTTAT+AGG | - | chr7.4:732362-732381 | MS.gene22723:intron | 25.0% |
! | TATATTATCATGTGCATGTT+TGG | + | chr7.4:732621-732640 | None:intergenic | 25.0% |
! | TTCAAGTAAGAAACCAAATA+TGG | + | chr7.4:731913-731932 | None:intergenic | 25.0% |
!! | ACATAATCTATTTTCTCTTG+TGG | + | chr7.4:731590-731609 | None:intergenic | 25.0% |
!! | TATTATGACCAATTTTCACT+AGG | - | chr7.4:732297-732316 | MS.gene22723:intron | 25.0% |
!!! | CAAATAGTAGAAAGTACTAA+TGG | - | chr7.4:732097-732116 | MS.gene22723:intron | 25.0% |
!!! | GATTTTGAATACATTGGTTT+TGG | + | chr7.4:732042-732061 | None:intergenic | 25.0% |
AACAATGTTGCTACACTTAA+AGG | - | chr7.4:733049-733068 | MS.gene22723:CDS | 30.0% | |
ACAATGTTGCTACACTTAAA+GGG | - | chr7.4:733050-733069 | MS.gene22723:CDS | 30.0% | |
ACTAGAACTGTCACAATTAA+TGG | - | chr7.4:731725-731744 | MS.gene22723:CDS | 30.0% | |
ATGTATTCAAAATCCCAATC+TGG | - | chr7.4:732048-732067 | MS.gene22723:intron | 30.0% | |
GGTAAGTAGGAAACTAAATA+TGG | + | chr7.4:731991-732010 | None:intergenic | 30.0% | |
TGTATTCAAAATCCCAATCT+GGG | - | chr7.4:732049-732068 | MS.gene22723:intron | 30.0% | |
TGTCAATAAGATAGCTCATT+CGG | + | chr7.4:732457-732476 | None:intergenic | 30.0% | |
TTAATAAGGTTGTCTCCAAA+AGG | - | chr7.4:733002-733021 | MS.gene22723:CDS | 30.0% | |
TTTGACTCAAAATCAACCAT+TGG | - | chr7.4:731689-731708 | MS.gene22723:CDS | 30.0% | |
! | ATTAGATTCTAACGACCTTT+TGG | + | chr7.4:733020-733039 | None:intergenic | 30.0% |
! | GATTGGGATTTTGAATACAT+TGG | + | chr7.4:732048-732067 | None:intergenic | 30.0% |
!!! | CATTGGTTTTGGTAGTTTTT+TGG | + | chr7.4:732031-732050 | None:intergenic | 30.0% |
!!! | TTTTTTGGTCTGAAGTTTGT+GGG | + | chr7.4:732016-732035 | None:intergenic | 30.0% |
AGGTGATTTCAACAAATCCA+TGG | - | chr7.4:732590-732609 | MS.gene22723:intron | 35.0% | |
ATTTCAAGACAACCCAGATT+GGG | + | chr7.4:732064-732083 | None:intergenic | 35.0% | |
GGAAGAAAAGTAACCTTTCT+TGG | + | chr7.4:731787-731806 | None:intergenic | 35.0% | |
TATTTCAAGACAACCCAGAT+TGG | + | chr7.4:732065-732084 | None:intergenic | 35.0% | |
TTAGCTTAAGACAATCCATC+TGG | + | chr7.4:732325-732344 | None:intergenic | 35.0% | |
! | AATTTTCACTAGGAACCAGA+TGG | - | chr7.4:732307-732326 | MS.gene22723:intron | 35.0% |
! | AGTCTGAAATTCAACTCCAA+TGG | + | chr7.4:731708-731727 | None:intergenic | 35.0% |
! | ATCTGGTTCCTAGTGAAAAT+TGG | + | chr7.4:732308-732327 | None:intergenic | 35.0% |
! | CAGGTTTTGCAAAATCATGT+TGG | - | chr7.4:732563-732582 | MS.gene22723:intron | 35.0% |
! | GTCATGCTAATTGGTAACAA+AGG | - | chr7.4:732842-732861 | MS.gene22723:intron | 35.0% |
! | GTGTTTAAGGTTGTTGTGAT+TGG | - | chr7.4:731608-731627 | MS.gene22723:CDS | 35.0% |
!! | TGCAAAATCATGTTGGTTCA+AGG | - | chr7.4:732570-732589 | MS.gene22723:intron | 35.0% |
!!! | GTTTTTTGGTCTGAAGTTTG+TGG | + | chr7.4:732017-732036 | None:intergenic | 35.0% |
AACACATACAACTAGCCAAC+CGG | - | chr7.4:732172-732191 | MS.gene22723:intron | 40.0% | |
AACTCATCAAAGCTCAGATC+TGG | - | chr7.4:731750-731769 | MS.gene22723:CDS | 40.0% | |
AAGTTTGTGGGATGGTAAGT+AGG | + | chr7.4:732004-732023 | None:intergenic | 40.0% | |
AATCACTTGGGATCAACAAC+CGG | + | chr7.4:732194-732213 | None:intergenic | 40.0% | |
ACTCATCAAAGCTCAGATCT+GGG | - | chr7.4:731751-731770 | MS.gene22723:CDS | 40.0% | |
AGTTATGTCATACACCAGCA+TGG | + | chr7.4:732750-732769 | None:intergenic | 40.0% | |
CGTTTGATCATGTAGCTAGA+TGG | - | chr7.4:732780-732799 | MS.gene22723:intron | 40.0% | |
CTGAAGTCTCAGAGAAAAAG+AGG | + | chr7.4:732931-732950 | None:intergenic | 40.0% | |
GAAAGACTCAAATGCTGTCA+AGG | - | chr7.4:731645-731664 | MS.gene22723:CDS | 40.0% | |
GAATCAGGAAATGAATGGTG+TGG | - | chr7.4:731553-731572 | MS.gene22723:CDS | 40.0% | |
GACAAGCAAGTAAAACAGAG+AGG | + | chr7.4:731808-731827 | None:intergenic | 40.0% | |
GTGCATGTTTGGTATTTCCA+TGG | + | chr7.4:732610-732629 | None:intergenic | 40.0% | |
GTTACAAGTGCATACTACAG+AGG | - | chr7.4:732713-732732 | MS.gene22723:intron | 40.0% | |
TGGTAACAAAGGTGATCTTG+TGG | - | chr7.4:732853-732872 | MS.gene22723:intron | 40.0% | |
!! | ATACTACAGAGGAGCATTAG+GGG | - | chr7.4:732724-732743 | MS.gene22723:intron | 40.0% |
!! | CATACTACAGAGGAGCATTA+GGG | - | chr7.4:732723-732742 | MS.gene22723:intron | 40.0% |
!! | TCATGTAGCTAGATGGATTG+AGG | - | chr7.4:732787-732806 | MS.gene22723:intron | 40.0% |
ACCAATTAGCATGACGACGA+TGG | + | chr7.4:732837-732856 | None:intergenic | 45.0% | |
TCCATCGTCGTCATGCTAAT+TGG | - | chr7.4:732833-732852 | MS.gene22723:intron | 45.0% | |
TGAATGGTGTGGAAGCTGAA+AGG | - | chr7.4:731564-731583 | MS.gene22723:CDS | 45.0% | |
TGATCTTGTGGACCAAAGAG+TGG | - | chr7.4:732865-732884 | MS.gene22723:intron | 45.0% | |
! | TTGGTCTGAAGTTTGTGGGA+TGG | + | chr7.4:732012-732031 | None:intergenic | 45.0% |
!! | CTAGATGGATTGAGGAACTG+CGG | - | chr7.4:732795-732814 | MS.gene22723:intron | 45.0% |
!! | GCATACTACAGAGGAGCATT+AGG | - | chr7.4:732722-732741 | MS.gene22723:intron | 45.0% |
!! | ATGTTATATAATAATAATAT+AGG | - | chr7.4:732681-732700 | MS.gene22723:intron | 5.0% |
ACTTGGGATCAACAACCGGT+TGG | + | chr7.4:732190-732209 | None:intergenic | 50.0% | |
AGATGCTGTGGAGTTTGCAG+AGG | - | chr7.4:732898-732917 | MS.gene22723:intron | 50.0% | |
CATGACGACGATGGAGTTGT+CGG | + | chr7.4:732828-732847 | None:intergenic | 50.0% | |
GTGGAGTTTGCAGAGGATCA+GGG | - | chr7.4:732905-732924 | MS.gene22723:intron | 50.0% | |
TGTGGAGTTTGCAGAGGATC+AGG | - | chr7.4:732904-732923 | MS.gene22723:intron | 50.0% | |
! | GTGATTGGTGACTCAGCAGT+AGG | - | chr7.4:731623-731642 | MS.gene22723:CDS | 50.0% |
! | TCTGAGACTTCAGCGTTCAG+TGG | - | chr7.4:732938-732957 | MS.gene22723:CDS | 50.0% |
CTTCCGTGTGCACCACTCTT+TGG | + | chr7.4:732880-732899 | None:intergenic | 55.0% | |
GGACCAAAGAGTGGTGCACA+CGG | - | chr7.4:732874-732893 | MS.gene22723:intron | 55.0% | |
GGGATACTGCTGGCCAAGAA+AGG | - | chr7.4:731771-731790 | MS.gene22723:CDS | 55.0% | |
! | GCTCAGATCTGGGATACTGC+TGG | - | chr7.4:731761-731780 | MS.gene22723:CDS | 55.0% |
GGTGCACACGGAAGATGCTG+TGG | - | chr7.4:732886-732905 | MS.gene22723:intron | 60.0% | |
!! | AGGAGCATTAGGGGCCATGC+TGG | - | chr7.4:732733-732752 | MS.gene22723:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 731551 | 733147 | 731551 | ID=MS.gene22723 |
chr7.4 | mRNA | 731551 | 733147 | 731551 | ID=MS.gene22723.t1;Parent=MS.gene22723 |
chr7.4 | exon | 732906 | 733147 | 732906 | ID=MS.gene22723.t1.exon1;Parent=MS.gene22723.t1 |
chr7.4 | CDS | 732906 | 733147 | 732906 | ID=cds.MS.gene22723.t1;Parent=MS.gene22723.t1 |
chr7.4 | exon | 731551 | 731995 | 731551 | ID=MS.gene22723.t1.exon2;Parent=MS.gene22723.t1 |
chr7.4 | CDS | 731551 | 731995 | 731551 | ID=cds.MS.gene22723.t1;Parent=MS.gene22723.t1 |
Gene Sequence |
Protein sequence |