Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061810.t1 | XP_013446770.1 | 100 | 225 | 0 | 0 | 1 | 225 | 1 | 225 | 3.80E-121 | 444.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061810.t1 | Q40191 | 93.8 | 225 | 14 | 0 | 1 | 225 | 1 | 225 | 6.4e-117 | 421.4 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061810.t1 | A0A072TTN3 | 100.0 | 225 | 0 | 0 | 1 | 225 | 1 | 225 | 2.7e-121 | 444.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061810.t1 | MTR_8g089985 | 100.000 | 225 | 0 | 0 | 1 | 225 | 1 | 225 | 1.66e-170 | 468 |
MS.gene061810.t1 | MTR_3g086980 | 89.732 | 224 | 21 | 2 | 1 | 224 | 1 | 222 | 3.08e-151 | 419 |
MS.gene061810.t1 | MTR_1g052475 | 70.642 | 218 | 63 | 1 | 7 | 223 | 5 | 222 | 7.08e-115 | 327 |
MS.gene061810.t1 | MTR_0262s0050 | 73.399 | 203 | 54 | 0 | 7 | 209 | 5 | 207 | 1.76e-111 | 318 |
MS.gene061810.t1 | MTR_8g027220 | 67.464 | 209 | 63 | 2 | 9 | 216 | 18 | 222 | 3.90e-98 | 285 |
MS.gene061810.t1 | MTR_4g064897 | 65.566 | 212 | 69 | 1 | 11 | 222 | 6 | 213 | 3.60e-97 | 282 |
MS.gene061810.t1 | MTR_2g005510 | 63.679 | 212 | 72 | 3 | 15 | 225 | 13 | 220 | 1.86e-93 | 273 |
MS.gene061810.t1 | MTR_3g069510 | 64.115 | 209 | 71 | 2 | 15 | 223 | 10 | 214 | 7.20e-93 | 271 |
MS.gene061810.t1 | MTR_2g075950 | 59.193 | 223 | 73 | 3 | 10 | 225 | 6 | 217 | 3.84e-92 | 270 |
MS.gene061810.t1 | MTR_8g036220 | 57.919 | 221 | 88 | 3 | 8 | 223 | 6 | 226 | 1.80e-91 | 268 |
MS.gene061810.t1 | MTR_2g083860 | 65.946 | 185 | 62 | 1 | 5 | 189 | 2 | 185 | 3.58e-89 | 262 |
MS.gene061810.t1 | MTR_2g014990 | 58.333 | 216 | 86 | 1 | 10 | 225 | 6 | 217 | 1.15e-88 | 261 |
MS.gene061810.t1 | MTR_4g079350 | 58.796 | 216 | 85 | 1 | 10 | 225 | 6 | 217 | 2.95e-88 | 259 |
MS.gene061810.t1 | MTR_4g088090 | 57.870 | 216 | 87 | 1 | 10 | 225 | 6 | 217 | 4.62e-88 | 259 |
MS.gene061810.t1 | MTR_1g078200 | 62.887 | 194 | 72 | 0 | 15 | 208 | 12 | 205 | 9.68e-87 | 256 |
MS.gene061810.t1 | MTR_2g090865 | 56.881 | 218 | 89 | 2 | 8 | 225 | 2 | 214 | 1.26e-85 | 253 |
MS.gene061810.t1 | MTR_7g405790 | 61.224 | 196 | 65 | 1 | 16 | 200 | 14 | 209 | 1.34e-84 | 250 |
MS.gene061810.t1 | MTR_7g117910 | 57.674 | 215 | 66 | 4 | 12 | 219 | 15 | 211 | 8.17e-80 | 238 |
MS.gene061810.t1 | MTR_7g051940 | 63.429 | 175 | 64 | 0 | 16 | 190 | 12 | 186 | 7.76e-79 | 236 |
MS.gene061810.t1 | MTR_6g079550 | 53.704 | 216 | 93 | 3 | 11 | 225 | 6 | 215 | 9.79e-76 | 228 |
MS.gene061810.t1 | MTR_8g107070 | 56.684 | 187 | 79 | 1 | 11 | 195 | 8 | 194 | 2.82e-69 | 213 |
MS.gene061810.t1 | MTR_2g027660 | 44.444 | 216 | 102 | 4 | 16 | 223 | 5 | 210 | 8.88e-61 | 189 |
MS.gene061810.t1 | MTR_6g021790 | 51.220 | 164 | 80 | 0 | 15 | 178 | 4 | 167 | 7.17e-60 | 187 |
MS.gene061810.t1 | MTR_8g031870 | 53.503 | 157 | 73 | 0 | 16 | 172 | 5 | 161 | 7.11e-59 | 184 |
MS.gene061810.t1 | MTR_8g031660 | 46.465 | 198 | 97 | 2 | 16 | 204 | 5 | 202 | 8.61e-59 | 184 |
MS.gene061810.t1 | MTR_8g006970 | 46.445 | 211 | 100 | 4 | 15 | 225 | 20 | 217 | 2.75e-57 | 181 |
MS.gene061810.t1 | MTR_8g006970 | 51.786 | 168 | 81 | 0 | 11 | 178 | 2 | 169 | 3.78e-57 | 179 |
MS.gene061810.t1 | MTR_7g081700 | 50.000 | 168 | 84 | 0 | 11 | 178 | 2 | 169 | 3.41e-56 | 177 |
MS.gene061810.t1 | MTR_8g031680 | 47.222 | 180 | 94 | 1 | 16 | 194 | 5 | 184 | 8.65e-56 | 177 |
MS.gene061810.t1 | MTR_2g005500 | 43.269 | 208 | 106 | 2 | 15 | 222 | 7 | 202 | 2.49e-55 | 176 |
MS.gene061810.t1 | MTR_1g068740 | 42.925 | 212 | 112 | 4 | 15 | 225 | 13 | 216 | 3.70e-54 | 173 |
MS.gene061810.t1 | MTR_8g031830 | 46.875 | 192 | 99 | 3 | 16 | 205 | 5 | 195 | 6.20e-54 | 172 |
MS.gene061810.t1 | MTR_1g068730 | 42.453 | 212 | 113 | 4 | 15 | 225 | 13 | 216 | 1.39e-53 | 171 |
MS.gene061810.t1 | MTR_1g115325 | 48.485 | 165 | 84 | 1 | 15 | 178 | 13 | 177 | 4.41e-53 | 170 |
MS.gene061810.t1 | MTR_7g100020 | 46.667 | 180 | 90 | 2 | 15 | 193 | 13 | 187 | 6.16e-53 | 170 |
MS.gene061810.t1 | MTR_1g094220 | 48.256 | 172 | 83 | 3 | 6 | 175 | 23 | 190 | 4.76e-50 | 162 |
MS.gene061810.t1 | MTR_1g094220 | 49.405 | 168 | 79 | 3 | 6 | 171 | 23 | 186 | 5.09e-50 | 162 |
MS.gene061810.t1 | MTR_1g094220 | 48.837 | 172 | 82 | 3 | 6 | 175 | 23 | 190 | 5.60e-50 | 162 |
MS.gene061810.t1 | MTR_1g094220 | 49.405 | 168 | 79 | 3 | 6 | 171 | 23 | 186 | 1.22e-49 | 162 |
MS.gene061810.t1 | MTR_3g064390 | 47.436 | 156 | 82 | 0 | 19 | 174 | 12 | 167 | 2.88e-49 | 160 |
MS.gene061810.t1 | MTR_5g076590 | 40.976 | 205 | 104 | 4 | 19 | 223 | 12 | 199 | 1.26e-48 | 158 |
MS.gene061810.t1 | MTR_4g063160 | 40.639 | 219 | 104 | 5 | 15 | 223 | 13 | 215 | 2.59e-48 | 158 |
MS.gene061810.t1 | MTR_2g096550 | 44.578 | 166 | 90 | 2 | 15 | 178 | 13 | 178 | 5.95e-48 | 157 |
MS.gene061810.t1 | MTR_4g099470 | 52.899 | 138 | 64 | 1 | 44 | 180 | 10 | 147 | 7.85e-47 | 153 |
MS.gene061810.t1 | MTR_2g102060 | 44.231 | 156 | 87 | 0 | 19 | 174 | 12 | 167 | 1.20e-45 | 150 |
MS.gene061810.t1 | MTR_8g093740 | 38.308 | 201 | 112 | 4 | 10 | 199 | 6 | 205 | 1.67e-45 | 150 |
MS.gene061810.t1 | MTR_1g068740 | 43.827 | 162 | 80 | 2 | 15 | 175 | 13 | 164 | 4.20e-45 | 149 |
MS.gene061810.t1 | MTR_8g103550 | 38.537 | 205 | 108 | 3 | 19 | 223 | 11 | 197 | 5.20e-45 | 149 |
MS.gene061810.t1 | MTR_1g029450 | 38.679 | 212 | 116 | 5 | 14 | 223 | 14 | 213 | 1.10e-44 | 149 |
MS.gene061810.t1 | MTR_3g096350 | 39.196 | 199 | 109 | 4 | 12 | 199 | 7 | 204 | 1.15e-44 | 148 |
MS.gene061810.t1 | MTR_1g068730 | 49.618 | 131 | 66 | 0 | 10 | 140 | 8 | 138 | 8.08e-44 | 145 |
MS.gene061810.t1 | MTR_5g013900 | 40.909 | 154 | 91 | 0 | 18 | 171 | 10 | 163 | 5.51e-43 | 144 |
MS.gene061810.t1 | MTR_7g103070 | 45.912 | 159 | 84 | 2 | 15 | 171 | 14 | 172 | 8.31e-42 | 141 |
MS.gene061810.t1 | MTR_1g090717 | 43.478 | 184 | 99 | 4 | 1 | 181 | 1 | 182 | 9.14e-42 | 141 |
MS.gene061810.t1 | MTR_4g098950 | 38.961 | 154 | 94 | 0 | 18 | 171 | 10 | 163 | 1.19e-41 | 140 |
MS.gene061810.t1 | MTR_3g087160 | 38.961 | 154 | 94 | 0 | 18 | 171 | 10 | 163 | 1.28e-41 | 140 |
MS.gene061810.t1 | MTR_8g090215 | 38.961 | 154 | 94 | 0 | 18 | 171 | 10 | 163 | 1.80e-41 | 140 |
MS.gene061810.t1 | MTR_1g062760 | 43.195 | 169 | 93 | 3 | 15 | 181 | 12 | 179 | 1.73e-40 | 138 |
MS.gene061810.t1 | MTR_3g064390 | 47.200 | 125 | 66 | 0 | 19 | 143 | 12 | 136 | 3.44e-38 | 130 |
MS.gene061810.t1 | MTR_8g092020 | 37.791 | 172 | 100 | 3 | 10 | 174 | 5 | 176 | 4.33e-36 | 126 |
MS.gene061810.t1 | MTR_1g097420 | 38.788 | 165 | 94 | 3 | 17 | 174 | 8 | 172 | 2.39e-35 | 124 |
MS.gene061810.t1 | MTR_3g096350 | 42.857 | 140 | 74 | 4 | 12 | 149 | 7 | 142 | 2.46e-34 | 120 |
MS.gene061810.t1 | MTR_3g096350 | 46.774 | 124 | 63 | 3 | 12 | 133 | 7 | 129 | 5.63e-34 | 119 |
MS.gene061810.t1 | MTR_4g069850 | 36.364 | 165 | 98 | 3 | 17 | 174 | 8 | 172 | 2.70e-33 | 119 |
MS.gene061810.t1 | MTR_2g101890 | 35.465 | 172 | 104 | 3 | 10 | 174 | 3 | 174 | 1.45e-32 | 117 |
MS.gene061810.t1 | MTR_4g012940 | 36.095 | 169 | 101 | 3 | 13 | 174 | 4 | 172 | 3.94e-32 | 116 |
MS.gene061810.t1 | MTR_6g039490 | 37.576 | 165 | 96 | 4 | 17 | 174 | 8 | 172 | 4.57e-32 | 116 |
MS.gene061810.t1 | MTR_8g093740 | 36.196 | 163 | 93 | 3 | 48 | 199 | 10 | 172 | 8.60e-32 | 114 |
MS.gene061810.t1 | MTR_1g097420 | 36.527 | 167 | 97 | 4 | 15 | 174 | 35 | 199 | 1.75e-30 | 112 |
MS.gene061810.t1 | MTR_7g103070 | 45.217 | 115 | 61 | 2 | 59 | 171 | 2 | 116 | 8.68e-28 | 103 |
MS.gene061810.t1 | MTR_2g005500 | 36.145 | 166 | 66 | 1 | 15 | 180 | 7 | 132 | 1.29e-26 | 100 |
MS.gene061810.t1 | MTR_3g107707 | 30.732 | 205 | 129 | 5 | 12 | 215 | 7 | 199 | 7.03e-25 | 97.8 |
MS.gene061810.t1 | MTR_3g107713 | 30.732 | 205 | 129 | 5 | 12 | 215 | 7 | 199 | 8.41e-25 | 97.8 |
MS.gene061810.t1 | MTR_3g107717 | 31.915 | 188 | 119 | 5 | 12 | 193 | 7 | 191 | 1.08e-24 | 97.4 |
MS.gene061810.t1 | MTR_8g031810 | 45.192 | 104 | 43 | 1 | 16 | 119 | 5 | 94 | 2.95e-24 | 92.8 |
MS.gene061810.t1 | MTR_1g069245 | 49.474 | 95 | 44 | 2 | 30 | 124 | 109 | 199 | 6.35e-23 | 92.8 |
MS.gene061810.t1 | MTR_2g090875 | 35.758 | 165 | 92 | 5 | 19 | 171 | 8 | 170 | 6.12e-22 | 89.7 |
MS.gene061810.t1 | MTR_4g088055 | 32.121 | 165 | 98 | 5 | 19 | 171 | 8 | 170 | 2.22e-20 | 85.5 |
MS.gene061810.t1 | MTR_2g078000 | 67.347 | 49 | 16 | 0 | 78 | 126 | 46 | 94 | 3.53e-20 | 82.4 |
MS.gene061810.t1 | MTR_4g073250 | 33.333 | 165 | 96 | 5 | 19 | 171 | 8 | 170 | 3.67e-20 | 85.1 |
MS.gene061810.t1 | MTR_6g087980 | 29.412 | 187 | 118 | 5 | 19 | 193 | 8 | 192 | 6.57e-20 | 84.7 |
MS.gene061810.t1 | MTR_3g078260 | 27.861 | 201 | 131 | 5 | 19 | 207 | 10 | 208 | 6.41e-19 | 82.0 |
MS.gene061810.t1 | MTR_1452s0010 | 45.570 | 79 | 43 | 0 | 37 | 115 | 1 | 79 | 7.11e-19 | 79.0 |
MS.gene061810.t1 | MTR_8g075240 | 32.121 | 165 | 98 | 5 | 19 | 171 | 8 | 170 | 1.84e-18 | 80.5 |
MS.gene061810.t1 | MTR_4g113620 | 28.169 | 213 | 130 | 8 | 12 | 216 | 7 | 204 | 2.91e-18 | 80.1 |
MS.gene061810.t1 | MTR_5g022600 | 31.515 | 165 | 99 | 5 | 19 | 171 | 8 | 170 | 9.11e-18 | 78.6 |
MS.gene061810.t1 | MTR_3g078260 | 34.211 | 114 | 72 | 3 | 19 | 131 | 10 | 121 | 6.27e-16 | 72.4 |
MS.gene061810.t1 | MTR_2g078560 | 51.562 | 64 | 25 | 1 | 79 | 136 | 54 | 117 | 9.97e-16 | 75.1 |
MS.gene061810.t1 | MTR_3g053480 | 58.182 | 55 | 22 | 1 | 11 | 65 | 10 | 63 | 3.43e-15 | 68.2 |
MS.gene061810.t1 | MTR_1686s0010 | 35.870 | 92 | 59 | 0 | 37 | 128 | 1 | 92 | 6.75e-15 | 68.2 |
MS.gene061810.t1 | MTR_8g099250 | 58.824 | 51 | 21 | 0 | 11 | 61 | 10 | 60 | 2.26e-14 | 66.2 |
MS.gene061810.t1 | MTR_1g059590 | 30.189 | 159 | 104 | 3 | 20 | 178 | 398 | 549 | 1.81e-13 | 69.3 |
MS.gene061810.t1 | MTR_1g059590 | 30.189 | 159 | 104 | 3 | 20 | 178 | 431 | 582 | 1.88e-13 | 69.3 |
MS.gene061810.t1 | MTR_5g092060 | 26.744 | 172 | 114 | 5 | 18 | 181 | 105 | 272 | 1.27e-12 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene061810.t1 | AT5G65270 | 84.071 | 226 | 35 | 1 | 1 | 225 | 1 | 226 | 4.51e-143 | 399 |
MS.gene061810.t1 | AT4G39990 | 79.439 | 214 | 40 | 2 | 13 | 225 | 13 | 223 | 7.40e-127 | 358 |
MS.gene061810.t1 | AT3G12160 | 73.272 | 217 | 56 | 1 | 7 | 223 | 5 | 219 | 2.24e-120 | 341 |
MS.gene061810.t1 | AT5G47960 | 75.234 | 214 | 50 | 2 | 11 | 223 | 9 | 220 | 2.33e-117 | 333 |
MS.gene061810.t1 | AT1G07410 | 72.376 | 181 | 50 | 0 | 15 | 195 | 10 | 190 | 1.45e-96 | 281 |
MS.gene061810.t1 | AT1G09630 | 60.465 | 215 | 81 | 2 | 11 | 225 | 6 | 216 | 2.19e-95 | 278 |
MS.gene061810.t1 | AT3G46830 | 72.000 | 175 | 49 | 0 | 11 | 185 | 6 | 180 | 4.74e-92 | 269 |
MS.gene061810.t1 | AT3G46830 | 72.000 | 175 | 49 | 0 | 11 | 185 | 6 | 180 | 4.74e-92 | 269 |
MS.gene061810.t1 | AT4G18800 | 61.682 | 214 | 75 | 2 | 10 | 223 | 6 | 212 | 6.15e-92 | 269 |
MS.gene061810.t1 | AT1G16920 | 62.085 | 211 | 75 | 2 | 15 | 225 | 11 | 216 | 7.50e-92 | 269 |
MS.gene061810.t1 | AT5G59150 | 72.414 | 174 | 48 | 0 | 12 | 185 | 7 | 180 | 3.22e-91 | 267 |
MS.gene061810.t1 | AT4G18430 | 59.535 | 215 | 81 | 2 | 10 | 223 | 6 | 215 | 3.25e-91 | 267 |
MS.gene061810.t1 | AT5G45750 | 61.682 | 214 | 77 | 2 | 10 | 223 | 6 | 214 | 6.40e-91 | 266 |
MS.gene061810.t1 | AT5G47520 | 57.991 | 219 | 91 | 1 | 7 | 225 | 4 | 221 | 8.91e-89 | 261 |
MS.gene061810.t1 | AT5G60860 | 58.796 | 216 | 85 | 1 | 10 | 225 | 6 | 217 | 2.35e-88 | 260 |
MS.gene061810.t1 | AT3G15060 | 58.333 | 216 | 86 | 1 | 10 | 225 | 6 | 217 | 1.04e-87 | 258 |
MS.gene061810.t1 | AT2G33870 | 57.604 | 217 | 87 | 2 | 10 | 225 | 6 | 218 | 2.19e-87 | 258 |
MS.gene061810.t1 | AT1G28550 | 58.962 | 212 | 82 | 2 | 15 | 225 | 11 | 218 | 1.84e-86 | 255 |
MS.gene061810.t1 | AT1G06400 | 56.944 | 216 | 88 | 1 | 10 | 225 | 6 | 216 | 2.62e-85 | 252 |
MS.gene061810.t1 | AT1G01200 | 59.361 | 219 | 78 | 5 | 12 | 223 | 23 | 237 | 2.70e-85 | 253 |
MS.gene061810.t1 | AT1G05810 | 62.088 | 182 | 69 | 0 | 9 | 190 | 4 | 185 | 2.66e-81 | 242 |
MS.gene061810.t1 | AT1G05810 | 62.088 | 182 | 69 | 0 | 9 | 190 | 50 | 231 | 7.27e-81 | 243 |
MS.gene061810.t1 | AT2G43130 | 60.795 | 176 | 69 | 0 | 15 | 190 | 10 | 185 | 5.73e-79 | 236 |
MS.gene061810.t1 | AT2G31680 | 60.227 | 176 | 70 | 0 | 15 | 190 | 10 | 185 | 9.08e-78 | 233 |
MS.gene061810.t1 | AT3G07410 | 54.976 | 211 | 88 | 2 | 15 | 223 | 10 | 215 | 3.79e-77 | 231 |
MS.gene061810.t1 | AT1G18200 | 53.659 | 205 | 91 | 2 | 11 | 215 | 7 | 207 | 2.01e-76 | 230 |
MS.gene061810.t1 | AT1G73640 | 52.232 | 224 | 95 | 4 | 12 | 223 | 8 | 231 | 2.12e-76 | 230 |
MS.gene061810.t1 | AT5G59150 | 72.000 | 125 | 35 | 0 | 61 | 185 | 5 | 129 | 4.03e-63 | 194 |
MS.gene061810.t1 | AT4G17160 | 45.283 | 212 | 100 | 3 | 16 | 223 | 5 | 204 | 3.33e-61 | 191 |
MS.gene061810.t1 | AT4G17170 | 51.829 | 164 | 79 | 0 | 16 | 179 | 5 | 168 | 5.95e-61 | 190 |
MS.gene061810.t1 | AT1G02130 | 45.909 | 220 | 96 | 4 | 11 | 225 | 2 | 203 | 5.25e-60 | 187 |
MS.gene061810.t1 | AT4G35860 | 48.619 | 181 | 92 | 1 | 15 | 194 | 4 | 184 | 1.12e-59 | 187 |
MS.gene061810.t1 | AT4G17530 | 53.254 | 169 | 77 | 2 | 11 | 178 | 2 | 169 | 1.92e-57 | 181 |
MS.gene061810.t1 | AT5G47200 | 53.254 | 169 | 77 | 2 | 11 | 178 | 2 | 169 | 2.14e-57 | 181 |
MS.gene061810.t1 | AT3G11730 | 43.541 | 209 | 107 | 3 | 15 | 223 | 6 | 203 | 2.30e-55 | 176 |
MS.gene061810.t1 | AT3G46060 | 48.485 | 165 | 84 | 1 | 15 | 178 | 13 | 177 | 1.22e-52 | 169 |
MS.gene061810.t1 | AT3G46060 | 48.485 | 165 | 84 | 1 | 15 | 178 | 13 | 177 | 1.22e-52 | 169 |
MS.gene061810.t1 | AT3G46060 | 48.485 | 165 | 84 | 1 | 15 | 178 | 13 | 177 | 1.22e-52 | 169 |
MS.gene061810.t1 | AT5G59840 | 41.981 | 212 | 114 | 4 | 15 | 225 | 13 | 216 | 1.69e-52 | 169 |
MS.gene061810.t1 | AT3G54840 | 52.597 | 154 | 72 | 1 | 19 | 171 | 35 | 188 | 3.90e-52 | 167 |
MS.gene061810.t1 | AT3G54840 | 52.597 | 154 | 72 | 1 | 19 | 171 | 35 | 188 | 4.81e-52 | 167 |
MS.gene061810.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 15 | 178 | 13 | 177 | 1.41e-51 | 166 |
MS.gene061810.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 15 | 178 | 13 | 177 | 1.41e-51 | 166 |
MS.gene061810.t1 | AT3G53610 | 47.273 | 165 | 86 | 1 | 15 | 178 | 13 | 177 | 1.41e-51 | 166 |
MS.gene061810.t1 | AT3G54840 | 52.288 | 153 | 72 | 1 | 20 | 171 | 2 | 154 | 1.70e-51 | 164 |
MS.gene061810.t1 | AT5G03520 | 46.961 | 181 | 94 | 2 | 15 | 194 | 13 | 192 | 2.01e-51 | 166 |
MS.gene061810.t1 | AT3G09900 | 45.856 | 181 | 96 | 2 | 15 | 194 | 13 | 192 | 1.89e-50 | 164 |
MS.gene061810.t1 | AT4G19640 | 43.452 | 168 | 95 | 0 | 19 | 186 | 12 | 179 | 2.15e-48 | 158 |
MS.gene061810.t1 | AT5G45130 | 41.398 | 186 | 102 | 2 | 1 | 186 | 1 | 179 | 2.08e-46 | 152 |
MS.gene061810.t1 | AT1G43890 | 42.932 | 191 | 103 | 4 | 6 | 194 | 2 | 188 | 2.83e-46 | 152 |
MS.gene061810.t1 | AT1G43890 | 42.932 | 191 | 103 | 4 | 6 | 194 | 2 | 188 | 2.83e-46 | 152 |
MS.gene061810.t1 | AT1G43890 | 42.932 | 191 | 103 | 4 | 6 | 194 | 2 | 188 | 2.83e-46 | 152 |
MS.gene061810.t1 | AT5G45130 | 42.169 | 166 | 96 | 0 | 21 | 186 | 22 | 187 | 6.61e-45 | 149 |
MS.gene061810.t1 | AT4G35860 | 48.905 | 137 | 69 | 1 | 59 | 194 | 2 | 138 | 1.56e-44 | 147 |
MS.gene061810.t1 | AT4G39890 | 40.000 | 155 | 92 | 1 | 18 | 171 | 10 | 164 | 6.23e-42 | 142 |
MS.gene061810.t1 | AT2G44610 | 38.961 | 154 | 94 | 0 | 18 | 171 | 10 | 163 | 7.35e-42 | 141 |
MS.gene061810.t1 | AT5G10260 | 38.217 | 157 | 97 | 0 | 18 | 174 | 10 | 166 | 9.06e-42 | 141 |
MS.gene061810.t1 | AT2G22290 | 38.217 | 157 | 97 | 0 | 18 | 174 | 10 | 166 | 3.10e-41 | 140 |
MS.gene061810.t1 | AT5G03530 | 43.195 | 169 | 93 | 3 | 15 | 181 | 11 | 178 | 1.03e-39 | 136 |
MS.gene061810.t1 | AT5G03530 | 43.195 | 169 | 93 | 3 | 15 | 181 | 11 | 178 | 1.03e-39 | 136 |
MS.gene061810.t1 | AT5G03520 | 45.139 | 144 | 77 | 2 | 52 | 194 | 40 | 182 | 3.36e-39 | 134 |
MS.gene061810.t1 | AT5G64990 | 36.025 | 161 | 103 | 0 | 18 | 178 | 8 | 168 | 4.76e-38 | 131 |
MS.gene061810.t1 | AT4G19640 | 39.623 | 159 | 95 | 1 | 19 | 177 | 12 | 169 | 8.11e-38 | 130 |
MS.gene061810.t1 | AT4G19640 | 44.800 | 125 | 69 | 0 | 19 | 143 | 12 | 136 | 1.18e-36 | 126 |
MS.gene061810.t1 | AT1G22740 | 40.000 | 165 | 92 | 3 | 17 | 174 | 8 | 172 | 8.36e-36 | 125 |
MS.gene061810.t1 | AT5G64990 | 34.524 | 168 | 103 | 1 | 18 | 178 | 8 | 175 | 2.42e-35 | 125 |
MS.gene061810.t1 | AT5G46025 | 57.143 | 105 | 44 | 1 | 79 | 182 | 6 | 110 | 1.38e-34 | 119 |
MS.gene061810.t1 | AT2G21880 | 37.576 | 165 | 96 | 3 | 17 | 174 | 9 | 173 | 3.51e-34 | 122 |
MS.gene061810.t1 | AT4G09720 | 38.182 | 165 | 95 | 3 | 17 | 174 | 8 | 172 | 1.71e-33 | 120 |
MS.gene061810.t1 | AT1G52280 | 37.576 | 165 | 96 | 3 | 17 | 174 | 8 | 172 | 2.09e-33 | 119 |
MS.gene061810.t1 | AT3G18820 | 36.970 | 165 | 97 | 3 | 17 | 174 | 8 | 172 | 8.24e-33 | 118 |
MS.gene061810.t1 | AT4G09720 | 37.059 | 170 | 95 | 3 | 17 | 174 | 8 | 177 | 9.28e-33 | 118 |
MS.gene061810.t1 | AT3G09910 | 39.645 | 169 | 99 | 3 | 15 | 181 | 11 | 178 | 1.93e-32 | 117 |
MS.gene061810.t1 | AT3G09910 | 39.645 | 169 | 99 | 3 | 15 | 181 | 11 | 178 | 1.93e-32 | 117 |
MS.gene061810.t1 | AT3G09910 | 39.645 | 169 | 99 | 3 | 15 | 181 | 11 | 178 | 1.93e-32 | 117 |
MS.gene061810.t1 | AT3G09910 | 41.509 | 159 | 90 | 3 | 15 | 171 | 11 | 168 | 5.10e-32 | 115 |
MS.gene061810.t1 | AT3G09910 | 41.509 | 159 | 90 | 3 | 15 | 171 | 11 | 168 | 5.10e-32 | 115 |
MS.gene061810.t1 | AT4G09720 | 35.795 | 176 | 95 | 3 | 17 | 174 | 8 | 183 | 1.22e-31 | 115 |
MS.gene061810.t1 | AT1G49300 | 35.329 | 167 | 101 | 3 | 17 | 176 | 8 | 174 | 2.64e-31 | 114 |
MS.gene061810.t1 | AT1G49300 | 35.329 | 167 | 101 | 3 | 17 | 176 | 8 | 174 | 2.64e-31 | 114 |
MS.gene061810.t1 | AT3G16100 | 36.364 | 165 | 98 | 3 | 17 | 174 | 8 | 172 | 2.73e-31 | 114 |
MS.gene061810.t1 | AT5G39620 | 36.747 | 166 | 94 | 3 | 18 | 174 | 6 | 169 | 2.81e-30 | 111 |
MS.gene061810.t1 | AT5G55080 | 32.919 | 161 | 105 | 2 | 18 | 178 | 14 | 171 | 6.54e-27 | 103 |
MS.gene061810.t1 | AT2G21880 | 36.486 | 148 | 87 | 3 | 34 | 174 | 1 | 148 | 7.35e-27 | 102 |
MS.gene061810.t1 | AT2G21880 | 36.486 | 148 | 87 | 3 | 34 | 174 | 1 | 148 | 7.35e-27 | 102 |
MS.gene061810.t1 | AT5G55190 | 31.915 | 188 | 119 | 5 | 12 | 193 | 7 | 191 | 1.23e-24 | 97.4 |
MS.gene061810.t1 | AT2G44690 | 36.970 | 165 | 90 | 5 | 19 | 171 | 20 | 182 | 1.64e-24 | 96.7 |
MS.gene061810.t1 | AT5G20020 | 33.951 | 162 | 103 | 4 | 12 | 172 | 7 | 165 | 1.68e-24 | 97.1 |
MS.gene061810.t1 | AT4G09720 | 39.259 | 135 | 75 | 3 | 47 | 174 | 4 | 138 | 1.68e-24 | 95.9 |
MS.gene061810.t1 | AT4G09720 | 39.259 | 135 | 75 | 3 | 47 | 174 | 4 | 138 | 1.68e-24 | 95.9 |
MS.gene061810.t1 | AT4G09720 | 39.259 | 135 | 75 | 3 | 47 | 174 | 4 | 138 | 1.68e-24 | 95.9 |
MS.gene061810.t1 | AT2G21880 | 32.727 | 165 | 96 | 4 | 17 | 174 | 9 | 165 | 1.90e-24 | 96.3 |
MS.gene061810.t1 | AT5G20010 | 33.951 | 162 | 103 | 4 | 12 | 172 | 7 | 165 | 2.07e-24 | 96.7 |
MS.gene061810.t1 | AT5G45970 | 34.320 | 169 | 97 | 5 | 19 | 175 | 8 | 174 | 3.39e-20 | 85.1 |
MS.gene061810.t1 | AT4G35020 | 33.566 | 143 | 85 | 4 | 19 | 160 | 8 | 141 | 3.53e-20 | 85.1 |
MS.gene061810.t1 | AT4G35020 | 33.566 | 143 | 85 | 4 | 19 | 160 | 8 | 141 | 3.53e-20 | 85.1 |
MS.gene061810.t1 | AT4G35020 | 33.566 | 143 | 85 | 4 | 19 | 160 | 8 | 141 | 3.53e-20 | 85.1 |
MS.gene061810.t1 | AT1G20090 | 33.939 | 165 | 95 | 6 | 19 | 171 | 7 | 169 | 8.24e-20 | 84.0 |
MS.gene061810.t1 | AT1G75840 | 33.333 | 165 | 96 | 6 | 19 | 171 | 8 | 170 | 1.15e-19 | 83.6 |
MS.gene061810.t1 | AT3G48040 | 32.121 | 165 | 98 | 5 | 19 | 171 | 10 | 172 | 3.19e-19 | 82.8 |
MS.gene061810.t1 | AT5G62880 | 30.814 | 172 | 105 | 5 | 19 | 178 | 10 | 179 | 8.05e-19 | 81.6 |
MS.gene061810.t1 | AT4G28950 | 30.000 | 180 | 114 | 5 | 18 | 187 | 7 | 184 | 2.02e-18 | 80.5 |
MS.gene061810.t1 | AT3G51300 | 31.515 | 165 | 99 | 6 | 19 | 171 | 8 | 170 | 3.01e-18 | 79.7 |
MS.gene061810.t1 | AT2G17800 | 33.884 | 121 | 77 | 3 | 19 | 138 | 8 | 126 | 8.08e-18 | 78.6 |
MS.gene061810.t1 | AT2G17800 | 33.884 | 121 | 77 | 3 | 19 | 138 | 8 | 126 | 8.08e-18 | 78.6 |
MS.gene061810.t1 | AT4G35950 | 33.884 | 121 | 77 | 3 | 19 | 138 | 8 | 126 | 8.97e-18 | 78.6 |
MS.gene061810.t1 | AT5G62880 | 33.577 | 137 | 81 | 4 | 19 | 154 | 10 | 137 | 1.90e-17 | 77.8 |
MS.gene061810.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 19 | 131 | 8 | 119 | 2.19e-17 | 76.3 |
MS.gene061810.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 19 | 131 | 8 | 119 | 2.19e-17 | 76.3 |
MS.gene061810.t1 | AT3G48040 | 33.566 | 143 | 85 | 4 | 19 | 160 | 10 | 143 | 2.50e-17 | 77.0 |
MS.gene061810.t1 | AT4G08190 | 57.812 | 64 | 24 | 1 | 108 | 171 | 67 | 127 | 1.46e-16 | 73.6 |
Find 57 sgRNAs with CRISPR-Local
Find 138 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGGGAACTCAGCATCTTTAT+TGG | 0.218769 | 4.3:+10463596 | MS.gene061810:CDS |
GTGTTCAAGGTGGTGCTAAT+AGG | 0.356230 | 4.3:+10461294 | MS.gene061810:CDS |
ATGGCAAGTGGAGGAGGTTA+TGG | 0.360985 | 4.3:+10461246 | MS.gene061810:CDS |
AATATAGTCATCATTCTTGT+AGG | 0.367456 | 4.3:+10463375 | MS.gene061810:CDS |
GGGAACTCAGCATCTTTATT+GGG | 0.375208 | 4.3:+10463597 | MS.gene061810:CDS |
AGTTACAAGTGCATACTATA+GGG | 0.377475 | 4.3:+10463254 | MS.gene061810:CDS |
CAGTTACAAGTGCATACTAT+AGG | 0.390896 | 4.3:+10463253 | MS.gene061810:CDS |
CCTAGCTGCTGATGAAAGTC+AGG | 0.396436 | 4.3:+10463569 | MS.gene061810:CDS |
AGACTGTTAAGGCTCAGATC+TGG | 0.423616 | 4.3:+10461436 | MS.gene061810:CDS |
TGAATTTCAGACAAGGACTT+TGG | 0.450824 | 4.3:+10461401 | MS.gene061810:CDS |
GGGATTTCCTGTGCAGGACC+TGG | 0.455890 | 4.3:-10463636 | None:intergenic |
GGTGGGAAAATCACAGATAC+TGG | 0.456737 | 4.3:+10461326 | MS.gene061810:CDS |
GCTGATGAAAGTCAGGGAAA+TGG | 0.458869 | 4.3:+10463576 | MS.gene061810:CDS |
CTGATGAAAGTCAGGGAAAT+GGG | 0.459797 | 4.3:+10463577 | MS.gene061810:CDS |
CATCGATCATAAGACTGTTA+AGG | 0.464870 | 4.3:+10461425 | MS.gene061810:CDS |
AAAGAGTTTGCTGAGAAAGA+AGG | 0.479211 | 4.3:+10463447 | MS.gene061810:CDS |
CCTGACTTTCATCAGCAGCT+AGG | 0.480446 | 4.3:-10463569 | None:intergenic |
CAACACATATTGCTCTTAGC+AGG | 0.481769 | 4.3:-10463657 | None:intergenic |
GAGGATAGACTACGTGTTCA+AGG | 0.485779 | 4.3:+10461281 | MS.gene061810:CDS |
TTCTAGGAATGAATTCAGCT+TGG | 0.488716 | 4.3:+10461356 | MS.gene061810:CDS |
ACGAAGTTCTTCTAGCCAGC+GGG | 0.491684 | 4.3:-10463337 | None:intergenic |
GACTGTTAAGGCTCAGATCT+GGG | 0.511094 | 4.3:+10461437 | MS.gene061810:CDS |
GTGATCATGGCAAGTGGAGG+AGG | 0.522777 | 4.3:+10461240 | None:intergenic |
GGCCAGAAAATTATTATCCC+AGG | 0.523028 | 4.3:+10463618 | MS.gene061810:CDS |
CTGAAATTCAACTCCGATGG+TGG | 0.524809 | 4.3:-10461388 | None:intergenic |
TTCTGTCAAAACTGTCATGA+AGG | 0.526886 | 4.3:-10463520 | None:intergenic |
TTAGCAGGGATTTCCTGTGC+AGG | 0.530187 | 4.3:-10463642 | None:intergenic |
GGATTTCCTGTGCAGGACCT+GGG | 0.560786 | 4.3:-10463635 | None:intergenic |
TATTATCCCAGGTCCTGCAC+AGG | 0.561046 | 4.3:+10463629 | MS.gene061810:CDS |
TACGAAGTTCTTCTAGCCAG+CGG | 0.561924 | 4.3:-10463338 | None:intergenic |
GCTCAGATCTGGGATACTGC+TGG | 0.571910 | 4.3:+10461447 | MS.gene061810:CDS |
ATATAGTCATCATTCTTGTA+GGG | 0.573648 | 4.3:+10463376 | MS.gene061810:CDS |
CTAATAGGTGATTCAGCGGT+GGG | 0.575293 | 4.3:+10461309 | MS.gene061810:CDS |
GGGTGCTGTAGGTGCAATGT+TGG | 0.576296 | 4.3:+10463275 | MS.gene061810:CDS |
GCATACTATAGGGGTGCTGT+AGG | 0.576356 | 4.3:+10463264 | MS.gene061810:CDS |
TGACTATATTCTTGTCAGCA+TGG | 0.576390 | 4.3:-10463362 | None:intergenic |
AACACATATTGCTCTTAGCA+GGG | 0.581419 | 4.3:-10463656 | None:intergenic |
TGTCTGAAATTCAACTCCGA+TGG | 0.591501 | 4.3:-10461391 | None:intergenic |
TGAACACGTAGTCTATCCTC+TGG | 0.595332 | 4.3:-10461278 | None:intergenic |
CCAGCGGGGTATATGATCAA+AGG | 0.603870 | 4.3:-10463322 | None:intergenic |
ATTAGTTGCTTGCAATGCTG+AGG | 0.612060 | 4.3:-10463487 | None:intergenic |
TTGGACTCAAAGTCCACCAT+CGG | 0.615554 | 4.3:+10461375 | MS.gene061810:CDS |
GGGATACTGCTGGTCAAGAA+CGG | 0.618877 | 4.3:+10461457 | MS.gene061810:CDS |
GCTAATAGGTGATTCAGCGG+TGG | 0.621664 | 4.3:+10461308 | MS.gene061810:CDS |
CCTCCGTGGGTACATCACGC+TGG | 0.628174 | 4.3:-10463419 | None:intergenic |
CCTTTGATCATATACCCCGC+TGG | 0.633269 | 4.3:+10463322 | MS.gene061810:CDS |
GTTACAAGTGCATACTATAG+GGG | 0.641245 | 4.3:+10463255 | MS.gene061810:CDS |
TGAGAAGTGATCATGGCAAG+TGG | 0.645187 | 4.3:+10461234 | None:intergenic |
GAACCAGCGTGATGTACCCA+CGG | 0.662205 | 4.3:+10463416 | MS.gene061810:CDS |
GAAGTGATCATGGCAAGTGG+AGG | 0.663980 | 4.3:+10461237 | None:intergenic |
CGAAGTTCTTCTAGCCAGCG+GGG | 0.667509 | 4.3:-10463336 | None:intergenic |
CTAGCTGCTGATGAAAGTCA+GGG | 0.672607 | 4.3:+10463570 | MS.gene061810:CDS |
GGTGCTAATAGGTGATTCAG+CGG | 0.697101 | 4.3:+10461305 | MS.gene061810:CDS |
TCGGAGTTGAATTTCAGACA+AGG | 0.697673 | 4.3:+10461394 | MS.gene061810:CDS |
GTTATGGAGATGCAAACCAG+AGG | 0.738436 | 4.3:+10461262 | MS.gene061810:CDS |
GATAGACTACGTGTTCAAGG+TGG | 0.744499 | 4.3:+10461284 | MS.gene061810:CDS |
CCAGCGTGATGTACCCACGG+AGG | 0.817288 | 4.3:+10463419 | MS.gene061810:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATAATAATTAGTACATTAA+AGG | + | chr4.3:10462728-10462747 | MS.gene061810:intron | 10.0% |
!! | ATATACTAATAATACAAATT+TGG | + | chr4.3:10462065-10462084 | MS.gene061810:intron | 10.0% |
!! | ATTTAAGTATAAAAATTTGT+AGG | - | chr4.3:10462266-10462285 | None:intergenic | 10.0% |
!! | ATTTGTATTATTAGTATATT+AGG | - | chr4.3:10462064-10462083 | None:intergenic | 10.0% |
!! | TACAAAAAAAAAATACAAAA+TGG | - | chr4.3:10463098-10463117 | None:intergenic | 10.0% |
!! | TATACTAATAATACAAATTT+GGG | + | chr4.3:10462066-10462085 | MS.gene061810:intron | 10.0% |
!! | TTTAAGTATAAAAATTTGTA+GGG | - | chr4.3:10462265-10462284 | None:intergenic | 10.0% |
!! | TTTAATCAAATGAAATATAT+TGG | + | chr4.3:10461774-10461793 | MS.gene061810:intron | 10.0% |
!! | ATATTGAATCATAGTTTAAT+TGG | + | chr4.3:10461642-10461661 | MS.gene061810:intron | 15.0% |
!! | GTTTATATTGTAGTTTAAAT+TGG | - | chr4.3:10462875-10462894 | None:intergenic | 15.0% |
!! | TAACATAATTAGTTAGAATA+TGG | + | chr4.3:10463155-10463174 | MS.gene061810:intron | 15.0% |
!! | TTAAAATAAAAAACACACTA+AGG | - | chr4.3:10461940-10461959 | None:intergenic | 15.0% |
!!! | ATTGTAGCTATAATATTTTA+CGG | + | chr4.3:10461895-10461914 | MS.gene061810:intron | 15.0% |
!!! | ATTTTTATACTTAAATTCTC+AGG | + | chr4.3:10462270-10462289 | MS.gene061810:intron | 15.0% |
!! | AAAAAAAATACAAAATGGCT+TGG | - | chr4.3:10463093-10463112 | None:intergenic | 20.0% |
!! | AAATTAAAATCATCAACTCT+AGG | - | chr4.3:10462314-10462333 | None:intergenic | 20.0% |
!! | CATAAACCATTGAAATATTA+CGG | - | chr4.3:10463219-10463238 | None:intergenic | 20.0% |
!! | CATATGAATAATTTATCAAC+TGG | - | chr4.3:10462612-10462631 | None:intergenic | 20.0% |
!! | GTTAAGAAATTAAATGTAGA+AGG | - | chr4.3:10462218-10462237 | None:intergenic | 20.0% |
!! | TGTGCAAATTTAAATCTAAT+GGG | - | chr4.3:10462519-10462538 | None:intergenic | 20.0% |
!!! | AATTTTCCGTAATATTTCAA+TGG | + | chr4.3:10463210-10463229 | MS.gene061810:intron | 20.0% |
!!! | ATTTTAATTAGTAATGTCTC+CGG | + | chr4.3:10461953-10461972 | MS.gene061810:intron | 20.0% |
!!! | CAGTTGATAAATTATTCATA+TGG | + | chr4.3:10462610-10462629 | MS.gene061810:intron | 20.0% |
!!! | TATATTTTCGCTTTATGAAT+TGG | - | chr4.3:10461876-10461895 | None:intergenic | 20.0% |
! | AATATAGTCATCATTCTTGT+AGG | + | chr4.3:10463375-10463394 | MS.gene061810:CDS | 25.0% |
! | ATATAGTCATCATTCTTGTA+GGG | + | chr4.3:10463376-10463395 | MS.gene061810:CDS | 25.0% |
! | CGTAATATTTCAATGGTTTA+TGG | + | chr4.3:10463217-10463236 | MS.gene061810:intron | 25.0% |
! | CTGTGCAAATTTAAATCTAA+TGG | - | chr4.3:10462520-10462539 | None:intergenic | 25.0% |
! | GAATATATGTTGAAACTTGT+AGG | + | chr4.3:10462818-10462837 | MS.gene061810:intron | 25.0% |
! | GTTAGTTAGTTAGTTAGTTA+TGG | - | chr4.3:10461500-10461519 | None:intergenic | 25.0% |
! | TAAATAAAGCATGAAAGCAA+AGG | - | chr4.3:10462437-10462456 | None:intergenic | 25.0% |
! | TATTACGGAAAATTGCAATT+TGG | - | chr4.3:10463204-10463223 | None:intergenic | 25.0% |
! | TGTGTTGAATATGAAAAATG+AGG | - | chr4.3:10462897-10462916 | None:intergenic | 25.0% |
!! | TTTTTAAACTAAAGCTGCAA+TGG | + | chr4.3:10462384-10462403 | MS.gene061810:intron | 25.0% |
!!! | TCAACTTTAATTTTCTCAAC+CGG | - | chr4.3:10461975-10461994 | None:intergenic | 25.0% |
!!! | TGTACAATCTTTTTTTGTTC+TGG | + | chr4.3:10463114-10463133 | MS.gene061810:intron | 25.0% |
AGAAAAACAATATGCATGCA+GGG | - | chr4.3:10462669-10462688 | None:intergenic | 30.0% | |
AGTGCAAAACTATCTTACTT+GGG | + | chr4.3:10461835-10461854 | MS.gene061810:intron | 30.0% | |
AGTTACAAGTGCATACTATA+GGG | + | chr4.3:10463254-10463273 | MS.gene061810:CDS | 30.0% | |
ATTTGCCTAGAAATTGATCA+TGG | - | chr4.3:10462959-10462978 | None:intergenic | 30.0% | |
GTATGCTAATAACAGATTCA+AGG | - | chr4.3:10461554-10461573 | None:intergenic | 30.0% | |
TAGTGCAAAACTATCTTACT+TGG | + | chr4.3:10461834-10461853 | MS.gene061810:intron | 30.0% | |
TGAGAATGTAGAGTAAACTT+CGG | - | chr4.3:10462694-10462713 | None:intergenic | 30.0% | |
TTAATTGGAGCTTGACTAAA+AGG | + | chr4.3:10461657-10461676 | MS.gene061810:intron | 30.0% | |
! | ATGATCAATTTCTAGGCAAA+TGG | + | chr4.3:10462958-10462977 | MS.gene061810:intron | 30.0% |
! | CTAGATACATCAACTTTTAC+TGG | + | chr4.3:10461999-10462018 | MS.gene061810:intron | 30.0% |
!! | ACATGCATGTTTGTTATTCA+CGG | + | chr4.3:10462774-10462793 | MS.gene061810:intron | 30.0% |
AACACATATTGCTCTTAGCA+GGG | - | chr4.3:10463659-10463678 | None:intergenic | 35.0% | |
ATTTCTTAACTTATGCCCCA+AGG | + | chr4.3:10462228-10462247 | MS.gene061810:intron | 35.0% | |
CAGAAAAACAATATGCATGC+AGG | - | chr4.3:10462670-10462689 | None:intergenic | 35.0% | |
CAGTTACAAGTGCATACTAT+AGG | + | chr4.3:10463253-10463272 | MS.gene061810:CDS | 35.0% | |
CATCGATCATAAGACTGTTA+AGG | + | chr4.3:10461425-10461444 | MS.gene061810:CDS | 35.0% | |
CTAGTTTCTTGCATACTAGT+TGG | + | chr4.3:10461721-10461740 | MS.gene061810:intron | 35.0% | |
CTGAACTGATAAGAGCAAAA+CGG | - | chr4.3:10463015-10463034 | None:intergenic | 35.0% | |
GAAAAACAATATGCATGCAG+GGG | - | chr4.3:10462668-10462687 | None:intergenic | 35.0% | |
GCTGCAATGGAATAAAATTG+AGG | + | chr4.3:10462397-10462416 | MS.gene061810:intron | 35.0% | |
GTTACAAGTGCATACTATAG+GGG | + | chr4.3:10463255-10463274 | MS.gene061810:CDS | 35.0% | |
TGAATTTCAGACAAGGACTT+TGG | + | chr4.3:10461401-10461420 | MS.gene061810:CDS | 35.0% | |
TGACTATATTCTTGTCAGCA+TGG | - | chr4.3:10463365-10463384 | None:intergenic | 35.0% | |
TGCAGCATTGTAAAACTCAA+AGG | + | chr4.3:10462476-10462495 | MS.gene061810:intron | 35.0% | |
TGTGAATAGATCAACTTTGC+AGG | + | chr4.3:10462572-10462591 | MS.gene061810:intron | 35.0% | |
TTCTGTCAAAACTGTCATGA+AGG | - | chr4.3:10463523-10463542 | None:intergenic | 35.0% | |
TTTCTTAACTTATGCCCCAA+GGG | + | chr4.3:10462229-10462248 | MS.gene061810:intron | 35.0% | |
! | GACCTGGGATAATAATTTTC+TGG | - | chr4.3:10463623-10463642 | None:intergenic | 35.0% |
! | GCAAAACGGCTAATATTTTG+CGG | - | chr4.3:10463001-10463020 | None:intergenic | 35.0% |
! | TTCTAGGAATGAATTCAGCT+TGG | + | chr4.3:10461356-10461375 | MS.gene061810:CDS | 35.0% |
!! | AAAGAGTTTGCTGAGAAAGA+AGG | + | chr4.3:10463447-10463466 | MS.gene061810:CDS | 35.0% |
!! | AGATACTGGCTAGATTTTCT+AGG | + | chr4.3:10461340-10461359 | MS.gene061810:CDS | 35.0% |
!! | TGTTCTGGTTAACTTGTATC+AGG | + | chr4.3:10463129-10463148 | MS.gene061810:intron | 35.0% |
AAATGGTTCACACTTGAAGG+GGG | + | chr4.3:10462975-10462994 | MS.gene061810:intron | 40.0% | |
AAGGATCGATTACTGGACTT+TGG | + | chr4.3:10461617-10461636 | MS.gene061810:intron | 40.0% | |
ATATTAGGTAGTACTCGCTC+TGG | - | chr4.3:10462049-10462068 | None:intergenic | 40.0% | |
ATCAAGTAGCTTTCTGCTTG+AGG | + | chr4.3:10463050-10463069 | MS.gene061810:intron | 40.0% | |
ATTAGTTGCTTGCAATGCTG+AGG | - | chr4.3:10463490-10463509 | None:intergenic | 40.0% | |
CAAATGGTTCACACTTGAAG+GGG | + | chr4.3:10462974-10462993 | MS.gene061810:intron | 40.0% | |
CAACACATATTGCTCTTAGC+AGG | - | chr4.3:10463660-10463679 | None:intergenic | 40.0% | |
CATGCATGTGTTCAGAAATC+TGG | - | chr4.3:10462763-10462782 | None:intergenic | 40.0% | |
CTCTACATTCTCAAGCTACA+TGG | + | chr4.3:10462701-10462720 | MS.gene061810:intron | 40.0% | |
CTGATGAAAGTCAGGGAAAT+GGG | + | chr4.3:10463577-10463596 | MS.gene061810:CDS | 40.0% | |
GCAAATGGTTCACACTTGAA+GGG | + | chr4.3:10462973-10462992 | MS.gene061810:intron | 40.0% | |
GGCCAGAAAATTATTATCCC+AGG | + | chr4.3:10463618-10463637 | MS.gene061810:CDS | 40.0% | |
GGGAACTCAGCATCTTTATT+GGG | + | chr4.3:10463597-10463616 | MS.gene061810:CDS | 40.0% | |
GGTAGATAAGGATCGATTAC+TGG | + | chr4.3:10461610-10461629 | MS.gene061810:intron | 40.0% | |
TAGGGAAATGTTAAGCCCTT+GGG | - | chr4.3:10462247-10462266 | None:intergenic | 40.0% | |
TCGGAGTTGAATTTCAGACA+AGG | + | chr4.3:10461394-10461413 | MS.gene061810:CDS | 40.0% | |
TGAAACTTGTAGGACTTGAG+AGG | + | chr4.3:10462828-10462847 | MS.gene061810:intron | 40.0% | |
TGGCTCCATGATCAATTTCT+AGG | + | chr4.3:10462951-10462970 | MS.gene061810:intron | 40.0% | |
TGGGAACTCAGCATCTTTAT+TGG | + | chr4.3:10463596-10463615 | MS.gene061810:CDS | 40.0% | |
! | TCTGATCGTACTGGTAGATA+AGG | + | chr4.3:10461598-10461617 | MS.gene061810:intron | 40.0% |
! | TGTCTGAAATTCAACTCCGA+TGG | - | chr4.3:10461394-10461413 | None:intergenic | 40.0% |
!! | CTTCTTAACTTGTGCCCTAA+GGG | - | chr4.3:10462107-10462126 | None:intergenic | 40.0% |
!! | CTTGTTAACTTGTGCCCTTA+GGG | + | chr4.3:10462090-10462109 | MS.gene061810:intron | 40.0% |
!! | GATAGTTTTGCACTATGCAG+AGG | - | chr4.3:10461829-10461848 | None:intergenic | 40.0% |
!! | TCTTGTTAACTTGTGCCCTT+AGG | + | chr4.3:10462089-10462108 | MS.gene061810:intron | 40.0% |
AGACTGTTAAGGCTCAGATC+TGG | + | chr4.3:10461436-10461455 | MS.gene061810:CDS | 45.0% | |
AGGGAAATGTTAAGCCCTTG+GGG | - | chr4.3:10462246-10462265 | None:intergenic | 45.0% | |
CTAATAGGTGATTCAGCGGT+GGG | + | chr4.3:10461309-10461328 | MS.gene061810:CDS | 45.0% | |
CTAGCTGCTGATGAAAGTCA+GGG | + | chr4.3:10463570-10463589 | MS.gene061810:CDS | 45.0% | |
CTGAAATTCAACTCCGATGG+TGG | - | chr4.3:10461391-10461410 | None:intergenic | 45.0% | |
GACTGTTAAGGCTCAGATCT+GGG | + | chr4.3:10461437-10461456 | MS.gene061810:CDS | 45.0% | |
GAGGATAGACTACGTGTTCA+AGG | + | chr4.3:10461281-10461300 | MS.gene061810:CDS | 45.0% | |
GATAGACTACGTGTTCAAGG+TGG | + | chr4.3:10461284-10461303 | MS.gene061810:CDS | 45.0% | |
GCTGATGAAAGTCAGGGAAA+TGG | + | chr4.3:10463576-10463595 | MS.gene061810:CDS | 45.0% | |
GGCAAATGGTTCACACTTGA+AGG | + | chr4.3:10462972-10462991 | MS.gene061810:intron | 45.0% | |
GGTGCTAATAGGTGATTCAG+CGG | + | chr4.3:10461305-10461324 | MS.gene061810:CDS | 45.0% | |
GGTGGGAAAATCACAGATAC+TGG | + | chr4.3:10461326-10461345 | MS.gene061810:CDS | 45.0% | |
GTAGGGAAATGTTAAGCCCT+TGG | - | chr4.3:10462248-10462267 | None:intergenic | 45.0% | |
GTTATGGAGATGCAAACCAG+AGG | + | chr4.3:10461262-10461281 | MS.gene061810:CDS | 45.0% | |
TACGAAGTTCTTCTAGCCAG+CGG | - | chr4.3:10463341-10463360 | None:intergenic | 45.0% | |
TCTGTGTGATCTGATCGTAC+TGG | + | chr4.3:10461589-10461608 | MS.gene061810:intron | 45.0% | |
TGAACACGTAGTCTATCCTC+TGG | - | chr4.3:10461281-10461300 | None:intergenic | 45.0% | |
TGTGACAGCGTCAAAGAATG+TGG | + | chr4.3:10462931-10462950 | MS.gene061810:intron | 45.0% | |
TTGGACTCAAAGTCCACCAT+CGG | + | chr4.3:10461375-10461394 | MS.gene061810:CDS | 45.0% | |
! | AAACTCTTTTGCATCCTCCG+TGG | - | chr4.3:10463436-10463455 | None:intergenic | 45.0% |
! | AACTCTTTTGCATCCTCCGT+GGG | - | chr4.3:10463435-10463454 | None:intergenic | 45.0% |
! | GTGTTCAAGGTGGTGCTAAT+AGG | + | chr4.3:10461294-10461313 | MS.gene061810:CDS | 45.0% |
!! | GCTTCTTAACTTGTGCCCTA+AGG | - | chr4.3:10462108-10462127 | None:intergenic | 45.0% |
ACGAAGTTCTTCTAGCCAGC+GGG | - | chr4.3:10463340-10463359 | None:intergenic | 50.0% | |
ATGGCAAGTGGAGGAGGTTA+TGG | + | chr4.3:10461246-10461265 | MS.gene061810:CDS | 50.0% | |
CCAGCGGGGTATATGATCAA+AGG | - | chr4.3:10463325-10463344 | None:intergenic | 50.0% | |
CCTAGCTGCTGATGAAAGTC+AGG | + | chr4.3:10463569-10463588 | MS.gene061810:CDS | 50.0% | |
CCTGACTTTCATCAGCAGCT+AGG | - | chr4.3:10463572-10463591 | None:intergenic | 50.0% | |
CCTTTGATCATATACCCCGC+TGG | + | chr4.3:10463322-10463341 | MS.gene061810:CDS | 50.0% | |
GCTAATAGGTGATTCAGCGG+TGG | + | chr4.3:10461308-10461327 | MS.gene061810:CDS | 50.0% | |
GGGATACTGCTGGTCAAGAA+CGG | + | chr4.3:10461457-10461476 | MS.gene061810:CDS | 50.0% | |
TATTATCCCAGGTCCTGCAC+AGG | + | chr4.3:10463629-10463648 | MS.gene061810:CDS | 50.0% | |
TTAGCAGGGATTTCCTGTGC+AGG | - | chr4.3:10463645-10463664 | None:intergenic | 50.0% | |
!! | GCATACTATAGGGGTGCTGT+AGG | + | chr4.3:10463264-10463283 | MS.gene061810:CDS | 50.0% |
CGAAGTTCTTCTAGCCAGCG+GGG | - | chr4.3:10463339-10463358 | None:intergenic | 55.0% | |
GAACCAGCGTGATGTACCCA+CGG | + | chr4.3:10463416-10463435 | MS.gene061810:CDS | 55.0% | |
GGATTTCCTGTGCAGGACCT+GGG | - | chr4.3:10463638-10463657 | None:intergenic | 55.0% | |
! | GCTCAGATCTGGGATACTGC+TGG | + | chr4.3:10461447-10461466 | MS.gene061810:CDS | 55.0% |
! | GGGTGCTGTAGGTGCAATGT+TGG | + | chr4.3:10463275-10463294 | MS.gene061810:CDS | 55.0% |
CAGCGTTGCTACTGCAGTGC+AGG | + | chr4.3:10462350-10462369 | MS.gene061810:intron | 60.0% | |
CTGCACTGCAGTAGCAACGC+TGG | - | chr4.3:10462352-10462371 | None:intergenic | 60.0% | |
GGGATTTCCTGTGCAGGACC+TGG | - | chr4.3:10463639-10463658 | None:intergenic | 60.0% | |
CCAGCGTGATGTACCCACGG+AGG | + | chr4.3:10463419-10463438 | MS.gene061810:CDS | 65.0% | |
CCTCCGTGGGTACATCACGC+TGG | - | chr4.3:10463422-10463441 | None:intergenic | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 10461246 | 10463689 | 10461246 | ID=MS.gene061810 |
chr4.3 | mRNA | 10461246 | 10463689 | 10461246 | ID=MS.gene061810.t1;Parent=MS.gene061810 |
chr4.3 | exon | 10461246 | 10461478 | 10461246 | ID=MS.gene061810.t1.exon1;Parent=MS.gene061810.t1 |
chr4.3 | CDS | 10461246 | 10461478 | 10461246 | ID=cds.MS.gene061810.t1;Parent=MS.gene061810.t1 |
chr4.3 | exon | 10463245 | 10463689 | 10463245 | ID=MS.gene061810.t1.exon2;Parent=MS.gene061810.t1 |
chr4.3 | CDS | 10463245 | 10463689 | 10463245 | ID=cds.MS.gene061810.t1;Parent=MS.gene061810.t1 |
Gene Sequence |
Protein sequence |