AlfalfaGEDB | MS.gene39542

M. sativa cultivar XinJiangDaYe / MS.gene39542

KEGG: K07904
GO: GO:0000166 GO:0001882 GO:0001883 GO:0003674 GO:0003824 GO:0003924 GO:0005488 GO:0005525 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017076 GO:0017111 GO:0019001 GO:0032549 GO:0032550 GO:0032553 GO:0032555 GO:0032561 GO:0035639 GO:0036094 GO:0043167 GO:0043168 GO:0097159 GO:0097367 GO:1901265 GO:1901363
PFAM: PF00071.25

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39542.t1	XP_013456917.1	100	217	0	0	1	217	1	217	3.00E-115	424.5

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39542.t1	Q9FJH0	92.1	216	17	0	1	216	1	216	6.6e-111	401.4

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39542.t1	I3SPW7	100.0	217	0	0	1	217	1	217	2.2e-115	424.5

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene39542	MS.gene051257	PPI
MS.gene39542	MS.gene050673	PPI
MS.gene39542	MS.gene97782	PPI
MS.gene39542	MS.gene058973	PPI
MS.gene39542	MS.gene007571	PPI
MS.gene39542	MS.gene99137	PPI
MS.gene54215	MS.gene39542	PPI
MS.gene39542	MS.gene065419	PPI
MS.gene39542	MS.gene57324	PPI
MS.gene39542	MS.gene24073	PPI
MS.gene39542	MS.gene61282	PPI
MS.gene39542	MS.gene22375	PPI
MS.gene39542	MS.gene41120	PPI
MS.gene39542	MS.gene55072	PPI
MS.gene39542	MS.gene021166	PPI
MS.gene39542	MS.gene015341	PPI
MS.gene39542	MS.gene75497	PPI
MS.gene39542	MS.gene41117	PPI
MS.gene39542	MS.gene061810	PPI
MS.gene72353	MS.gene39542	PPI
MS.gene39542	MS.gene93764	PPI
MS.gene39542	MS.gene024412	PPI
MS.gene39542	MS.gene073847	PPI
MS.gene39542	MS.gene040128	PPI
MS.gene39542	MS.gene69853	PPI
MS.gene39542	MS.gene09683	PPI
MS.gene048286	MS.gene39542	PPI
MS.gene39542	MS.gene01969	PPI
MS.gene39542	MS.gene030839	PPI
MS.gene39542	MS.gene004991	PPI
MS.gene64513	MS.gene39542	PPI
MS.gene39542	MS.gene02877	PPI
MS.gene39542	MS.gene28385	PPI
MS.gene39542	MS.gene75479	PPI
MS.gene39542	MS.gene067301	PPI
MS.gene39542	MS.gene30549	PPI
MS.gene39542	MS.gene71994	PPI
MS.gene39542	MS.gene33650	PPI
MS.gene39542	MS.gene21497	PPI
MS.gene39542	MS.gene018554	PPI
MS.gene001096	MS.gene39542	PPI
MS.gene39542	MS.gene79211	PPI
MS.gene39542	MS.gene07529	PPI
MS.gene39542	MS.gene074185	PPI
MS.gene39542	MS.gene026674	PPI
MS.gene39542	MS.gene025879	PPI
MS.gene39542	MS.gene068532	PPI
MS.gene39542	MS.gene57390	PPI
MS.gene39542	MS.gene20024	PPI
MS.gene39542	MS.gene065824	PPI
MS.gene39542	MS.gene003990	PPI
MS.gene39542	MS.gene000342	PPI
MS.gene39542	MS.gene93155	PPI
MS.gene39542	MS.gene033585	PPI
MS.gene39542	MS.gene86843	PPI
MS.gene39542	MS.gene31856	PPI
MS.gene39542	MS.gene09846	PPI
MS.gene39542	MS.gene000694	PPI
MS.gene39542	MS.gene84863	PPI
MS.gene011573	MS.gene39542	PPI
MS.gene39542	MS.gene84967	PPI
MS.gene39542	MS.gene013307	PPI
MS.gene046987	MS.gene39542	PPI
MS.gene23155	MS.gene39542	PPI
MS.gene39542	MS.gene007373	PPI
MS.gene39542	MS.gene024151	PPI
MS.gene39542	MS.gene84694	PPI
MS.gene54353	MS.gene39542	PPI
MS.gene39542	MS.gene060519	PPI
MS.gene39542	MS.gene073174	PPI
MS.gene39542	MS.gene061904	PPI
MS.gene39542	MS.gene94550	PPI
MS.gene39542	MS.gene037879	PPI
MS.gene39542	MS.gene068531	PPI
MS.gene39542	MS.gene58905	PPI
MS.gene39542	MS.gene22723	PPI
MS.gene39542	MS.gene055394	PPI
MS.gene39542	MS.gene47050	PPI
MS.gene39542	MS.gene28047	PPI
MS.gene39542	MS.gene018819	PPI
MS.gene39542	MS.gene003158	PPI
MS.gene70216	MS.gene39542	PPI
MS.gene39542	MS.gene06400	PPI
MS.gene39542	MS.gene058974	PPI
MS.gene84730	MS.gene39542	PPI
MS.gene39542	MS.gene24074	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39542.t1	MTR_4g088090	100.000	217	0	0	1	217	1	217	1.26e-161	445
MS.gene39542.t1	MTR_2g014990	95.392	217	10	0	1	217	1	217	1.68e-155	429
MS.gene39542.t1	MTR_4g079350	94.009	217	13	0	1	217	1	217	1.64e-154	427
MS.gene39542.t1	MTR_2g090865	80.556	216	39	2	1	216	1	213	3.82e-128	360
MS.gene39542.t1	MTR_2g075950	78.539	219	43	3	1	217	1	217	2.08e-125	353
MS.gene39542.t1	MTR_2g083860	76.256	219	47	2	1	216	1	217	9.28e-118	334
MS.gene39542.t1	MTR_3g069510	67.593	216	66	2	3	216	2	215	1.18e-107	308
MS.gene39542.t1	MTR_2g005510	66.977	215	66	2	6	217	8	220	1.11e-106	306
MS.gene39542.t1	MTR_4g064897	67.593	216	65	3	3	216	2	214	6.91e-105	301
MS.gene39542.t1	MTR_1g052475	61.905	210	75	2	11	215	13	222	3.28e-94	275
MS.gene39542.t1	MTR_0262s0050	60.190	211	78	3	11	217	13	221	2.56e-89	262
MS.gene39542.t1	MTR_8g089985	57.870	216	87	1	6	217	10	225	4.45e-88	259
MS.gene39542.t1	MTR_8g027220	57.407	216	90	1	4	217	17	232	2.63e-87	257
MS.gene39542.t1	MTR_6g079550	56.808	213	88	2	7	217	6	216	3.94e-87	256
MS.gene39542.t1	MTR_3g086980	55.814	215	88	2	6	215	9	221	1.52e-86	255
MS.gene39542.t1	MTR_7g405790	57.005	207	87	1	12	216	14	220	1.62e-79	237
MS.gene39542.t1	MTR_8g036220	53.304	227	95	4	1	216	1	227	8.43e-79	236
MS.gene39542.t1	MTR_1g078200	54.717	212	90	3	11	216	12	223	1.28e-78	235
MS.gene39542.t1	MTR_7g051940	54.327	208	88	2	12	216	12	215	4.09e-75	226
MS.gene39542.t1	MTR_8g107070	57.212	208	84	2	7	211	8	213	6.66e-75	227
MS.gene39542.t1	MTR_7g117910	47.945	219	94	3	3	217	10	212	8.39e-67	204
MS.gene39542.t1	MTR_2g027660	47.619	210	106	2	10	216	3	211	2.00e-65	201
MS.gene39542.t1	MTR_6g021790	45.070	213	107	3	10	216	3	211	9.46e-63	194
MS.gene39542.t1	MTR_7g081700	45.498	211	105	1	7	217	2	202	1.46e-59	186
MS.gene39542.t1	MTR_8g031660	46.667	210	103	4	10	216	3	206	1.40e-57	181
MS.gene39542.t1	MTR_8g006970	46.154	208	101	2	11	217	20	217	1.47e-57	181
MS.gene39542.t1	MTR_1g115325	42.925	212	108	3	9	215	11	214	3.20e-56	178
MS.gene39542.t1	MTR_1g068740	44.037	218	109	5	5	217	7	216	4.57e-56	177
MS.gene39542.t1	MTR_1g068730	43.578	218	110	5	5	217	7	216	2.11e-55	176
MS.gene39542.t1	MTR_7g100020	44.860	214	105	5	9	217	11	216	1.39e-54	174
MS.gene39542.t1	MTR_8g006970	52.410	166	79	0	9	174	4	169	1.84e-54	172
MS.gene39542.t1	MTR_8g031870	51.899	158	76	0	12	169	5	162	2.16e-54	172
MS.gene39542.t1	MTR_8g031680	40.670	209	121	2	10	216	3	210	2.10e-53	171
MS.gene39542.t1	MTR_2g005500	47.929	169	88	0	6	174	2	170	2.36e-51	165
MS.gene39542.t1	MTR_4g063160	42.453	212	110	5	9	215	11	215	1.51e-50	163
MS.gene39542.t1	MTR_8g031830	50.327	153	76	0	12	164	5	157	3.30e-50	162
MS.gene39542.t1	MTR_2g096550	39.631	217	116	5	4	215	6	212	3.20e-49	160
MS.gene39542.t1	MTR_3g064390	39.109	202	110	2	15	216	12	200	1.99e-48	157
MS.gene39542.t1	MTR_8g093740	40.000	220	115	5	1	215	1	208	2.36e-48	157
MS.gene39542.t1	MTR_1g068730	56.349	126	55	0	5	130	7	132	6.11e-48	155
MS.gene39542.t1	MTR_5g076590	39.109	202	110	2	15	216	12	200	6.70e-48	156
MS.gene39542.t1	MTR_1g068740	56.349	126	55	0	5	130	7	132	8.31e-48	155
MS.gene39542.t1	MTR_1g094220	44.785	163	89	1	15	176	33	195	3.98e-47	154
MS.gene39542.t1	MTR_7g103070	42.723	213	105	4	10	216	13	214	1.24e-46	153
MS.gene39542.t1	MTR_1g029450	40.092	217	106	6	9	216	13	214	1.61e-46	153
MS.gene39542.t1	MTR_3g096350	41.509	212	107	5	9	215	8	207	1.81e-46	152
MS.gene39542.t1	MTR_1g094220	44.937	158	86	1	15	171	33	190	5.34e-46	151
MS.gene39542.t1	MTR_4g099470	43.103	174	89	1	44	217	15	178	3.13e-45	149
MS.gene39542.t1	MTR_1g094220	46.104	154	82	1	15	167	33	186	3.25e-45	149
MS.gene39542.t1	MTR_1g094220	43.017	179	92	2	15	192	33	202	6.11e-45	150
MS.gene39542.t1	MTR_2g102060	37.438	203	111	3	15	216	12	199	7.80e-44	145
MS.gene39542.t1	MTR_1g090717	41.014	217	110	6	6	216	8	212	9.37e-44	146
MS.gene39542.t1	MTR_1g062760	41.981	212	105	6	10	215	11	210	2.68e-43	145
MS.gene39542.t1	MTR_4g098950	34.197	193	109	1	14	206	10	184	8.34e-42	140
MS.gene39542.t1	MTR_5g013900	33.679	193	110	1	14	206	10	184	9.25e-42	140
MS.gene39542.t1	MTR_8g103550	40.000	160	96	0	15	174	11	170	2.56e-41	139
MS.gene39542.t1	MTR_3g087160	36.306	157	100	0	14	170	10	166	9.34e-40	135
MS.gene39542.t1	MTR_8g090215	36.306	157	100	0	14	170	10	166	1.08e-39	135
MS.gene39542.t1	MTR_4g069850	36.190	210	113	7	13	214	8	204	8.08e-39	133
MS.gene39542.t1	MTR_2g101890	38.071	197	104	6	13	201	10	196	6.58e-38	131
MS.gene39542.t1	MTR_4g012940	37.500	200	103	7	13	202	8	195	2.67e-37	129
MS.gene39542.t1	MTR_3g064390	46.400	125	67	0	15	139	12	136	3.38e-37	127
MS.gene39542.t1	MTR_3g096350	52.846	123	55	3	9	129	8	129	5.78e-37	126
MS.gene39542.t1	MTR_1g097420	39.506	162	91	3	13	167	8	169	7.83e-37	128
MS.gene39542.t1	MTR_3g096350	52.846	123	55	3	9	129	8	129	1.01e-36	126
MS.gene39542.t1	MTR_8g092020	41.358	162	88	3	13	167	12	173	1.42e-36	127
MS.gene39542.t1	MTR_8g093740	38.418	177	93	4	44	215	10	175	3.24e-33	118
MS.gene39542.t1	MTR_1g069245	66.316	95	28	2	26	120	109	199	4.34e-33	119
MS.gene39542.t1	MTR_7g103070	41.071	168	82	4	55	216	2	158	2.76e-32	115
MS.gene39542.t1	MTR_6g039490	37.654	162	94	3	13	167	8	169	7.62e-32	115
MS.gene39542.t1	MTR_1g097420	30.734	218	117	4	13	196	8	225	1.23e-30	113
MS.gene39542.t1	MTR_3g107707	30.526	190	126	4	14	203	14	197	3.63e-26	100
MS.gene39542.t1	MTR_3g107713	30.526	190	126	4	14	203	14	197	3.71e-26	100
MS.gene39542.t1	MTR_2g078000	89.796	49	5	0	74	122	46	94	4.56e-26	97.4
MS.gene39542.t1	MTR_3g107717	31.016	187	123	4	14	200	14	194	8.04e-26	100
MS.gene39542.t1	MTR_2g005500	32.544	169	74	1	6	174	2	130	2.67e-22	89.4
MS.gene39542.t1	MTR_8g031810	43.689	103	44	1	12	114	5	93	2.99e-22	87.4
MS.gene39542.t1	MTR_2g078560	84.783	46	7	0	75	120	54	99	1.09e-20	88.6
MS.gene39542.t1	MTR_1452s0010	43.038	79	45	0	33	111	1	79	5.51e-20	81.6
MS.gene39542.t1	MTR_4g113620	26.425	193	127	5	14	206	14	191	7.04e-20	84.3
MS.gene39542.t1	MTR_3g078260	30.387	181	112	5	13	181	8	186	7.35e-20	84.3
MS.gene39542.t1	MTR_4g088055	37.500	120	72	3	13	131	6	123	7.96e-20	84.0
MS.gene39542.t1	MTR_4g073250	29.834	181	113	5	13	181	6	184	2.71e-19	82.4
MS.gene39542.t1	MTR_6g087980	36.290	124	76	3	13	135	6	127	2.74e-19	82.8
MS.gene39542.t1	MTR_2g090875	31.138	167	101	5	13	167	6	170	5.81e-19	81.6
MS.gene39542.t1	MTR_5g022600	31.737	167	100	5	13	167	6	170	1.00e-18	80.9
MS.gene39542.t1	MTR_8g075240	31.737	167	100	5	13	167	6	170	2.40e-18	79.7
MS.gene39542.t1	MTR_3g053480	55.172	58	23	1	1	55	1	58	7.03e-16	69.7
MS.gene39542.t1	MTR_1686s0010	32.609	92	62	0	33	124	1	92	2.82e-15	68.9
MS.gene39542.t1	MTR_3g078260	34.483	116	73	3	13	127	8	121	3.35e-15	70.5
MS.gene39542.t1	MTR_8g099250	55.172	58	23	1	1	55	1	58	2.96e-14	65.5
MS.gene39542.t1	MTR_1g059590	30.058	173	111	4	10	182	428	590	3.35e-14	71.2
MS.gene39542.t1	MTR_1g059590	30.058	173	111	4	10	182	395	557	3.75e-14	70.9
MS.gene39542.t1	MTR_5g092060	23.958	192	137	4	3	187	95	284	2.43e-12	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene39542.t1	AT5G60860	92.130	216	17	0	1	216	1	216	4.89e-152	421
MS.gene39542.t1	AT3G15060	88.479	217	25	0	1	217	1	217	1.90e-146	407
MS.gene39542.t1	AT1G28550	86.697	218	28	1	1	217	1	218	8.95e-143	397
MS.gene39542.t1	AT2G33870	85.714	217	30	1	1	216	1	217	2.00e-140	391
MS.gene39542.t1	AT4G18430	82.488	217	38	0	1	217	1	217	7.59e-140	390
MS.gene39542.t1	AT4G18800	82.028	217	34	2	1	216	1	213	4.00e-129	363
MS.gene39542.t1	AT5G45750	80.645	217	39	2	1	216	1	215	2.27e-127	358
MS.gene39542.t1	AT1G16920	77.419	217	46	2	1	216	1	215	1.22e-121	344
MS.gene39542.t1	AT1G06400	74.194	217	53	2	1	216	1	215	1.42e-118	336
MS.gene39542.t1	AT1G09630	67.742	217	66	2	3	217	2	216	9.73e-108	308
MS.gene39542.t1	AT1G07410	66.047	215	69	2	3	216	2	213	3.10e-104	300
MS.gene39542.t1	AT5G59150	66.055	218	67	3	3	216	2	216	4.13e-100	289
MS.gene39542.t1	AT3G46830	65.138	218	69	3	4	217	3	217	7.59e-99	286
MS.gene39542.t1	AT3G46830	65.138	218	69	3	4	217	3	217	7.59e-99	286
MS.gene39542.t1	AT3G12160	61.722	209	74	2	11	215	13	219	2.43e-93	272
MS.gene39542.t1	AT5G47960	63.507	211	68	3	11	215	13	220	1.58e-92	270
MS.gene39542.t1	AT4G39990	58.095	210	84	3	11	217	15	223	2.57e-87	257
MS.gene39542.t1	AT5G65270	57.075	212	86	1	11	217	15	226	1.26e-85	253
MS.gene39542.t1	AT5G47520	54.955	222	94	3	1	217	1	221	5.33e-84	249
MS.gene39542.t1	AT2G43130	55.093	216	88	3	6	216	2	213	5.40e-79	236
MS.gene39542.t1	AT1G05810	56.604	212	83	3	11	217	10	217	9.23e-79	235
MS.gene39542.t1	AT1G73640	59.574	188	75	1	7	193	7	194	9.32e-79	236
MS.gene39542.t1	AT1G05810	55.405	222	88	4	3	217	46	263	1.99e-78	236
MS.gene39542.t1	AT2G31680	54.067	209	94	1	11	217	10	218	1.19e-77	233
MS.gene39542.t1	AT1G18200	60.571	175	69	0	7	181	7	181	2.14e-76	229
MS.gene39542.t1	AT3G07410	55.072	207	92	1	11	216	10	216	7.14e-76	228
MS.gene39542.t1	AT1G01200	56.132	212	88	3	11	217	26	237	4.43e-75	226
MS.gene39542.t1	AT5G59150	62.048	166	56	3	55	216	3	165	7.72e-66	201
MS.gene39542.t1	AT4G17170	46.411	209	110	1	10	216	3	211	1.68e-64	199
MS.gene39542.t1	AT4G35860	44.498	209	114	1	10	216	3	211	6.55e-63	195
MS.gene39542.t1	AT4G17160	44.660	206	110	1	10	215	3	204	3.89e-62	192
MS.gene39542.t1	AT1G02130	45.972	211	103	2	7	216	2	202	3.07e-59	185
MS.gene39542.t1	AT4G17530	44.076	211	108	1	7	217	2	202	6.68e-58	182
MS.gene39542.t1	AT5G47200	44.076	211	108	1	7	217	2	202	1.20e-57	181
MS.gene39542.t1	AT5G03520	44.907	216	107	4	5	216	7	214	1.40e-55	176
MS.gene39542.t1	AT3G46060	44.811	212	104	4	9	215	11	214	3.10e-55	175
MS.gene39542.t1	AT3G46060	44.811	212	104	4	9	215	11	214	3.10e-55	175
MS.gene39542.t1	AT3G46060	44.811	212	104	4	9	215	11	214	3.10e-55	175
MS.gene39542.t1	AT3G53610	43.396	212	107	3	9	215	11	214	7.32e-55	174
MS.gene39542.t1	AT3G53610	43.396	212	107	3	9	215	11	214	7.32e-55	174
MS.gene39542.t1	AT3G53610	43.396	212	107	3	9	215	11	214	7.32e-55	174
MS.gene39542.t1	AT5G59840	43.458	214	108	4	9	217	11	216	1.11e-54	174
MS.gene39542.t1	AT3G09900	43.519	216	112	3	5	216	7	216	3.76e-53	170
MS.gene39542.t1	AT3G11730	42.857	210	109	3	8	215	3	203	3.92e-53	170
MS.gene39542.t1	AT5G45130	40.594	202	107	3	15	216	12	200	8.86e-51	164
MS.gene39542.t1	AT1G43890	46.739	184	95	3	1	182	1	183	8.66e-50	161
MS.gene39542.t1	AT1G43890	46.739	184	95	3	1	182	1	183	8.66e-50	161
MS.gene39542.t1	AT1G43890	46.739	184	95	3	1	182	1	183	8.66e-50	161
MS.gene39542.t1	AT4G19640	44.785	163	90	0	15	177	12	174	9.05e-50	161
MS.gene39542.t1	AT5G45130	40.500	200	106	3	17	216	22	208	1.41e-49	160
MS.gene39542.t1	AT3G54840	46.012	163	87	1	15	176	35	197	1.79e-47	155
MS.gene39542.t1	AT5G03530	41.892	222	111	6	1	216	1	210	3.32e-47	155
MS.gene39542.t1	AT5G03530	41.892	222	111	6	1	216	1	210	3.32e-47	155
MS.gene39542.t1	AT3G54840	45.679	162	87	1	16	176	2	163	5.48e-47	153
MS.gene39542.t1	AT3G54840	47.403	154	80	1	15	167	35	188	6.11e-46	151
MS.gene39542.t1	AT4G35860	40.854	164	95	1	55	216	2	165	5.16e-44	145
MS.gene39542.t1	AT2G44610	33.679	193	110	1	14	206	10	184	1.72e-40	137
MS.gene39542.t1	AT2G22290	36.306	157	100	0	14	170	10	166	3.73e-40	137
MS.gene39542.t1	AT4G19640	47.328	131	69	0	15	145	12	142	1.28e-39	135
MS.gene39542.t1	AT4G39890	36.709	158	99	1	14	170	10	167	1.71e-39	135
MS.gene39542.t1	AT4G19640	46.875	128	68	0	15	142	12	139	3.31e-39	132
MS.gene39542.t1	AT5G03520	41.040	173	90	4	48	216	40	204	4.43e-39	134
MS.gene39542.t1	AT3G09910	39.726	219	116	6	1	217	1	205	1.77e-38	132
MS.gene39542.t1	AT3G09910	39.726	219	116	6	1	217	1	205	1.77e-38	132
MS.gene39542.t1	AT3G09910	39.726	219	116	6	1	217	1	205	1.77e-38	132
MS.gene39542.t1	AT5G10260	31.606	193	114	1	14	206	10	184	2.17e-38	132
MS.gene39542.t1	AT1G22740	40.741	162	89	3	13	167	8	169	4.19e-38	131
MS.gene39542.t1	AT3G18820	36.667	210	112	7	13	214	8	204	4.45e-38	131
MS.gene39542.t1	AT1G52280	39.881	168	93	4	13	173	8	174	7.31e-38	130
MS.gene39542.t1	AT3G09910	40.816	196	105	4	1	194	1	187	1.60e-37	129
MS.gene39542.t1	AT3G09910	40.816	196	105	4	1	194	1	187	1.60e-37	129
MS.gene39542.t1	AT2G21880	40.000	165	92	3	13	170	9	173	6.10e-37	129
MS.gene39542.t1	AT5G64990	34.161	161	106	0	14	174	8	168	1.18e-36	127
MS.gene39542.t1	AT3G16100	39.506	162	91	3	13	167	8	169	3.30e-36	126
MS.gene39542.t1	AT5G46025	57.547	106	44	1	75	179	6	111	8.45e-36	122
MS.gene39542.t1	AT4G09720	38.788	165	94	3	13	170	8	172	1.54e-35	125
MS.gene39542.t1	AT1G49300	33.971	209	119	5	13	214	8	204	4.86e-35	123
MS.gene39542.t1	AT1G49300	33.971	209	119	5	13	214	8	204	4.86e-35	123
MS.gene39542.t1	AT4G09720	37.059	170	95	3	13	170	8	177	4.36e-34	121
MS.gene39542.t1	AT5G64990	32.738	168	106	1	14	174	8	175	6.20e-34	120
MS.gene39542.t1	AT5G39620	39.024	164	93	3	14	170	6	169	1.96e-33	119
MS.gene39542.t1	AT4G09720	35.795	176	95	3	13	170	8	183	4.39e-33	119
MS.gene39542.t1	AT2G21880	37.162	148	86	3	30	170	1	148	6.99e-28	104
MS.gene39542.t1	AT2G21880	37.162	148	86	3	30	170	1	148	6.99e-28	104
MS.gene39542.t1	AT2G21880	35.152	165	92	4	13	170	9	165	4.25e-27	103
MS.gene39542.t1	AT5G20010	30.526	190	126	4	14	203	14	197	3.69e-26	101
MS.gene39542.t1	AT5G20020	30.000	190	127	4	14	203	14	197	4.01e-26	100
MS.gene39542.t1	AT5G55190	30.256	195	130	4	14	208	14	202	4.56e-26	100
MS.gene39542.t1	AT5G55080	30.899	178	117	4	14	191	14	185	1.15e-25	99.8
MS.gene39542.t1	AT4G09720	36.957	138	80	3	40	170	1	138	3.37e-24	94.7
MS.gene39542.t1	AT4G09720	36.957	138	80	3	40	170	1	138	3.37e-24	94.7
MS.gene39542.t1	AT4G09720	36.957	138	80	3	40	170	1	138	3.37e-24	94.7
MS.gene39542.t1	AT2G44690	31.667	180	109	5	13	180	18	195	1.76e-21	88.6
MS.gene39542.t1	AT4G08190	56.338	71	28	1	97	167	60	127	2.15e-20	83.6
MS.gene39542.t1	AT4G35020	34.667	150	88	4	13	161	6	146	2.16e-20	85.5
MS.gene39542.t1	AT4G35020	34.667	150	88	4	13	161	6	146	2.16e-20	85.5
MS.gene39542.t1	AT4G35020	34.667	150	88	4	13	161	6	146	2.16e-20	85.5
MS.gene39542.t1	AT4G28950	28.492	179	116	5	13	181	6	182	2.06e-19	83.2
MS.gene39542.t1	AT3G48040	30.601	183	109	6	13	183	8	184	3.16e-19	82.4
MS.gene39542.t1	AT5G45970	32.934	167	98	5	13	167	6	170	6.88e-19	81.6
MS.gene39542.t1	AT1G75840	36.667	120	73	3	13	131	6	123	9.44e-19	80.9
MS.gene39542.t1	AT1G20090	35.833	120	74	3	13	131	5	122	1.29e-18	80.5
MS.gene39542.t1	AT5G62880	29.545	176	110	5	13	176	8	181	1.52e-18	80.9
MS.gene39542.t1	AT3G51300	32.121	165	98	5	15	167	8	170	4.06e-18	79.3
MS.gene39542.t1	AT2G17800	35.833	120	74	3	13	131	6	123	9.15e-18	78.6
MS.gene39542.t1	AT2G17800	35.833	120	74	3	13	131	6	123	9.15e-18	78.6
MS.gene39542.t1	AT4G35950	35.833	120	74	3	13	131	6	123	1.01e-17	78.2
MS.gene39542.t1	AT3G48040	31.210	157	94	5	13	157	8	162	3.40e-17	76.6
MS.gene39542.t1	AT4G35020	36.066	122	75	3	15	135	8	127	5.33e-17	75.1
MS.gene39542.t1	AT4G35020	36.066	122	75	3	15	135	8	127	5.33e-17	75.1
MS.gene39542.t1	AT5G62880	35.000	120	75	3	13	131	8	125	8.00e-17	75.9

Find 40 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
AGGTTGTTAAAGCTCAGATT+TGG	0.353549	4.2:-23221817	MS.gene39542:CDS
GTGGTATTGATTGGTGATTC+AGG	0.360317	4.2:-23221950	MS.gene39542:CDS
CTATTCAAAGTGGTATTGAT+TGG	0.383098	4.2:-23221959	MS.gene39542:CDS
CTATCGTGTGGTAAGCAAAA+AGG	0.392175	4.2:-23220623	MS.gene39542:CDS
AAGCATTCATGTTGATGATA+AGG	0.404191	4.2:-23221837	MS.gene39542:CDS
GGTTGTTAAAGCTCAGATTT+GGG	0.406299	4.2:-23221816	MS.gene39542:CDS
ACATTAATCGTCTGTCCCTT+AGG	0.435771	4.2:+23220568	None:intergenic
AACATCGTCGTGATGCTTGT+AGG	0.462903	4.2:-23220793	MS.gene39542:CDS
GAAAGCACTTTCAACGTTCA+AGG	0.472065	4.2:+23220666	None:intergenic
TTGATTGGTGATTCAGGTGT+TGG	0.487252	4.2:-23221944	MS.gene39542:CDS
CCATGTTACATTTGAAAATG+TGG	0.513693	4.2:-23220854	MS.gene39542:CDS
GCTTACTATCGTGGAGCTGT+TGG	0.514723	4.2:-23220904	MS.gene39542:CDS
CCTTGAGATTGGTGATGATC+CGG	0.524625	4.2:-23220599	MS.gene39542:CDS
AGGGACAGACGATTAATGTT+GGG	0.538607	4.2:-23220564	MS.gene39542:CDS
GTATCGGCTGTGAAGAAAGC+TGG	0.539767	4.2:-23220529	MS.gene39542:CDS
GGGATACTGCTGGTCAAGAA+AGG	0.539914	4.2:-23221796	MS.gene39542:intron
AAGGGACAGACGATTAATGT+TGG	0.545050	4.2:-23220565	MS.gene39542:CDS
CATTTGAAAATGTGGAGAGA+TGG	0.551036	4.2:-23220846	MS.gene39542:CDS
TGATCCGGCTGCTTTACCTA+AGG	0.554511	4.2:-23220584	MS.gene39542:CDS
CTCGAATCTAAATCCACCAT+TGG	0.555704	4.2:-23221878	MS.gene39542:CDS
TTTCAACGTTCAAGGACTCA+AGG	0.559306	4.2:+23220674	None:intergenic
GCTCAGATTTGGGATACTGC+TGG	0.571910	4.2:-23221806	MS.gene39542:CDS
AGTAAGCACTTGTAATTGCT+CGG	0.574407	4.2:+23220920	None:intergenic
AGCGAATTCAACACCAATGG+TGG	0.577629	4.2:+23221865	None:intergenic
TACAAGCATCACGACGATGT+TGG	0.583030	4.2:+23220795	None:intergenic
TGGGTCCCGTGATGATGTAT+CGG	0.586366	4.2:-23220545	MS.gene39542:CDS
CACAGCCGATACATCATCAC+GGG	0.588334	4.2:+23220540	None:intergenic
TAGATAATCGTAATCATCGT+CGG	0.591501	4.2:+23221979	None:intergenic
GATCCGGCTGCTTTACCTAA+GGG	0.592437	4.2:-23220583	MS.gene39542:CDS
CCGGATCATCACCAATCTCA+AGG	0.595869	4.2:+23220599	None:intergenic
ATAGATCTGCGTCAACACTT+CGG	0.604271	4.2:+23220642	None:intergenic
ATTACAAGTGCTTACTATCG+TGG	0.615261	4.2:-23220913	MS.gene39542:CDS
TGTCCCTTAGGTAAAGCAGC+CGG	0.625843	4.2:+23220580	None:intergenic
TTACGATTATCTATTCAAAG+TGG	0.630384	4.2:-23221969	MS.gene39542:CDS
TTCAACGTTCAAGGACTCAA+GGG	0.634550	4.2:+23220675	None:intergenic
CGGATCATCACCAATCTCAA+GGG	0.635787	4.2:+23220600	None:intergenic
AAACTGCTCGTAAATGACGC+AGG	0.673148	4.2:+23220758	None:intergenic
TCACAGCCGATACATCATCA+CGG	0.674525	4.2:+23220539	None:intergenic
AGTAGCGAATTCAACACCAA+TGG	0.678218	4.2:+23221862	None:intergenic
GTTGACGCAGATCTATCGTG+TGG	0.716753	4.2:-23220635	MS.gene39542:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	AAAAGTTAATATTCCATTTT+TGG	-	chr4.2:23221360-23221379	MS.gene39542:intron	15.0%
!!	AAAATGTAATTCACCAAAAA+TGG	+	chr4.2:23221376-23221395	None:intergenic	20.0%
!!	TGTAGTAATTTATAGCAAAA+TGG	-	chr4.2:23220775-23220794	MS.gene39542:CDS	20.0%
!!!	AAAAGTTGATAAAATACAGT+AGG	+	chr4.2:23221524-23221543	None:intergenic	20.0%
!!!	AAAGTTGATAAAATACAGTA+GGG	+	chr4.2:23221523-23221542	None:intergenic	20.0%
!!!	ATTTTTGGTGAATTACATTT+TGG	-	chr4.2:23221375-23221394	MS.gene39542:intron	20.0%
!!!	TTGTAAGTTATTTGGTAATT+TGG	-	chr4.2:23220798-23220817	MS.gene39542:CDS	20.0%
!	CAAAAAATTGTGGTTACAAA+CGG	+	chr4.2:23221191-23221210	None:intergenic	25.0%
!	CAAAATGGTTGTAAGTTATT+TGG	-	chr4.2:23220790-23220809	MS.gene39542:CDS	25.0%
!	CAATGCACTTAATTGTTAAA+CGG	-	chr4.2:23221243-23221262	MS.gene39542:intron	25.0%
!	CATTAACTGTTGAATAATAG+AGG	-	chr4.2:23220832-23220851	MS.gene39542:CDS	25.0%
!	GTTTAACAATTAAGTGCATT+GGG	+	chr4.2:23221244-23221263	None:intergenic	25.0%
!	TAAACCTAATGATTAAGCAT+CGG	-	chr4.2:23220948-23220967	MS.gene39542:intron	25.0%
!	TTACGATTATCTATTCAAAG+TGG	-	chr4.2:23220539-23220558	MS.gene39542:CDS	25.0%
!	TTTGCTTCAAATCTACATTT+CGG	+	chr4.2:23220986-23221005	None:intergenic	25.0%
!!	AGTTATTTGGTAATTTGGTT+AGG	-	chr4.2:23220803-23220822	MS.gene39542:CDS	25.0%
!!	GTTATTTGGTAATTTGGTTA+GGG	-	chr4.2:23220804-23220823	MS.gene39542:CDS	25.0%
!!	TTTTGATATTTTCATGTTGG+TGG	+	chr4.2:23221148-23221167	None:intergenic	25.0%
!!!	GTAACCACAATTTTTTGATA+AGG	-	chr4.2:23221194-23221213	MS.gene39542:intron	25.0%
	AATTAGGATGAGGAAGTTAA+AGG	+	chr4.2:23221415-23221434	None:intergenic	30.0%
	AATTGTTAAACGGTTTATCC+AGG	-	chr4.2:23221253-23221272	MS.gene39542:intron	30.0%
	AGAAAAACTTGTAGCATCTT+CGG	+	chr4.2:23221779-23221798	None:intergenic	30.0%
	AGGCTGTCAAATTACTAAAA+AGG	-	chr4.2:23221435-23221454	MS.gene39542:intron	30.0%
	AGTAATTTGACAGCCTAATT+AGG	+	chr4.2:23221431-23221450	None:intergenic	30.0%
	CCATGTTACATTTGAAAATG+TGG	-	chr4.2:23221654-23221673	MS.gene39542:intron	30.0%
	CGTTTAACAATTAAGTGCAT+TGG	+	chr4.2:23221245-23221264	None:intergenic	30.0%
	GTTGCCTTATCAAAAAATTG+TGG	+	chr4.2:23221201-23221220	None:intergenic	30.0%
	TAGATAATCGTAATCATCGT+CGG	+	chr4.2:23220532-23220551	None:intergenic	30.0%
	TTAACTTCCTCATCCTAATT+AGG	-	chr4.2:23221415-23221434	MS.gene39542:intron	30.0%
!	ACGGGAGAATACATATTTTA+TGG	-	chr4.2:23221801-23221820	MS.gene39542:CDS	30.0%
!	ATGCTACAAGTTTTTCTGAA+CGG	-	chr4.2:23221782-23221801	MS.gene39542:intron	30.0%
!	ATTTTCAAATGTAACATGGC+GGG	+	chr4.2:23221653-23221672	None:intergenic	30.0%
!	CATTTTCAAATGTAACATGG+CGG	+	chr4.2:23221654-23221673	None:intergenic	30.0%
!	CCACATTTTCAAATGTAACA+TGG	+	chr4.2:23221657-23221676	None:intergenic	30.0%
!!	AAGCATTCATGTTGATGATA+AGG	-	chr4.2:23220671-23220690	MS.gene39542:CDS	30.0%
!!	CGGTTTTGATATTTTCATGT+TGG	+	chr4.2:23221151-23221170	None:intergenic	30.0%
!!	CTATTCAAAGTGGTATTGAT+TGG	-	chr4.2:23220549-23220568	MS.gene39542:CDS	30.0%
!!!	AGTTTGCTTTTTTTCACTGA+AGG	-	chr4.2:23221563-23221582	MS.gene39542:intron	30.0%
	AACAATTAAGTGCATTGGGT+GGG	+	chr4.2:23221240-23221259	None:intergenic	35.0%
	ACTTTCATTTCAGCCATTCA+TGG	+	chr4.2:23220903-23220922	None:intergenic	35.0%
	AGGGTAGATCATTAGTAACA+TGG	+	chr4.2:23221504-23221523	None:intergenic	35.0%
	AGGTTGTTAAAGCTCAGATT+TGG	-	chr4.2:23220691-23220710	MS.gene39542:CDS	35.0%
	AGTAAGCACTTGTAATTGCT+CGG	+	chr4.2:23221591-23221610	None:intergenic	35.0%
	ATTACAAGTGCTTACTATCG+TGG	-	chr4.2:23221595-23221614	MS.gene39542:intron	35.0%
	CATTTGAAAATGTGGAGAGA+TGG	-	chr4.2:23221662-23221681	MS.gene39542:intron	35.0%
	CTGCTATTACGAATGTCATT+TGG	-	chr4.2:23220873-23220892	MS.gene39542:CDS	35.0%
	GGTTGTTAAAGCTCAGATTT+GGG	-	chr4.2:23220692-23220711	MS.gene39542:CDS	35.0%
	TAACAATTAAGTGCATTGGG+TGG	+	chr4.2:23221241-23221260	None:intergenic	35.0%
!	TGCTACAAGTTTTTCTGAAC+GGG	-	chr4.2:23221783-23221802	MS.gene39542:intron	35.0%
!	TTCGAGACTGAATTCGTTTT+TGG	+	chr4.2:23220616-23220635	None:intergenic	35.0%
	AAGGGACAGACGATTAATGT+TGG	-	chr4.2:23221943-23221962	MS.gene39542:CDS	40.0%
	ACATTAATCGTCTGTCCCTT+AGG	+	chr4.2:23221943-23221962	None:intergenic	40.0%
	AGGGACAGACGATTAATGTT+GGG	-	chr4.2:23221944-23221963	MS.gene39542:CDS	40.0%
	AGTAGCGAATTCAACACCAA+TGG	+	chr4.2:23220649-23220668	None:intergenic	40.0%
	ATAGATCTGCGTCAACACTT+CGG	+	chr4.2:23221869-23221888	None:intergenic	40.0%
	CTATCGTGTGGTAAGCAAAA+AGG	-	chr4.2:23221885-23221904	MS.gene39542:CDS	40.0%
	CTCGAATCTAAATCCACCAT+TGG	-	chr4.2:23220630-23220649	MS.gene39542:CDS	40.0%
	TAAACGGTTTATCCAGGTTG+CGG	-	chr4.2:23221259-23221278	MS.gene39542:intron	40.0%
	TTCAACGTTCAAGGACTCAA+GGG	+	chr4.2:23221836-23221855	None:intergenic	40.0%
	TTGACAGCCTAATTAGGATG+AGG	+	chr4.2:23221425-23221444	None:intergenic	40.0%
	TTGTCGAGCATTCTCACTTA+GGG	+	chr4.2:23221307-23221326	None:intergenic	40.0%
	TTTCAACGTTCAAGGACTCA+AGG	+	chr4.2:23221837-23221856	None:intergenic	40.0%
!	TTGATTGGTGATTCAGGTGT+TGG	-	chr4.2:23220564-23220583	MS.gene39542:CDS	40.0%
!!	CCTAATGATTAAGCATCGGT+CGG	-	chr4.2:23220952-23220971	MS.gene39542:intron	40.0%
!!	GAAAGCACTTTCAACGTTCA+AGG	+	chr4.2:23221845-23221864	None:intergenic	40.0%
!!	GTGGTATTGATTGGTGATTC+AGG	-	chr4.2:23220558-23220577	MS.gene39542:CDS	40.0%
	AAACTGCTCGTAAATGACGC+AGG	+	chr4.2:23221753-23221772	None:intergenic	45.0%
	AACATCGTCGTGATGCTTGT+AGG	-	chr4.2:23221715-23221734	MS.gene39542:intron	45.0%
	AGCAAAAAGGCCCTTGAGAT+TGG	-	chr4.2:23221898-23221917	MS.gene39542:CDS	45.0%
	AGCAAGCTTGTGGTTTAGTC+GGG	-	chr4.2:23221040-23221059	MS.gene39542:intron	45.0%
	AGCGAATTCAACACCAATGG+TGG	+	chr4.2:23220646-23220665	None:intergenic	45.0%
	CCGACCGATGCTTAATCATT+AGG	+	chr4.2:23220955-23220974	None:intergenic	45.0%
	CGAAACTGGGTGCATATTTC+AGG	+	chr4.2:23221016-23221035	None:intergenic	45.0%
	CGGATCATCACCAATCTCAA+GGG	+	chr4.2:23221911-23221930	None:intergenic	45.0%
	CTTGTCGAGCATTCTCACTT+AGG	+	chr4.2:23221308-23221327	None:intergenic	45.0%
	GAGCAAGCTTGTGGTTTAGT+CGG	-	chr4.2:23221039-23221058	MS.gene39542:intron	45.0%
	TACAAACGGTTGAACGTGGT+CGG	+	chr4.2:23221177-23221196	None:intergenic	45.0%
	TACAAGCATCACGACGATGT+TGG	+	chr4.2:23221716-23221735	None:intergenic	45.0%
	TCACAGCCGATACATCATCA+CGG	+	chr4.2:23221972-23221991	None:intergenic	45.0%
	TGGTTACAAACGGTTGAACG+TGG	+	chr4.2:23221181-23221200	None:intergenic	45.0%
	TGTCGAGCATTCTCACTTAG+GGG	+	chr4.2:23221306-23221325	None:intergenic	45.0%
!	GACTAAACCACAAGCTTGCT+CGG	+	chr4.2:23221040-23221059	None:intergenic	45.0%
!	GGGTGCATATTTCAGGTCAT+CGG	+	chr4.2:23221009-23221028	None:intergenic	45.0%
!	GTCATTTGGAGTGCCATGAA+TGG	-	chr4.2:23220887-23220906	MS.gene39542:CDS	45.0%
!!	CCTTGAGATTGGTGATGATC+CGG	-	chr4.2:23221909-23221928	MS.gene39542:CDS	45.0%
!!	GTGCATTGGGTGGGTTATTT+CGG	+	chr4.2:23221231-23221250	None:intergenic	45.0%
!!	TGCATTGGGTGGGTTATTTC+GGG	+	chr4.2:23221230-23221249	None:intergenic	45.0%
!!!	GATTAAGCATCGGTCGGTTT+TGG	-	chr4.2:23220958-23220977	MS.gene39542:intron	45.0%
	CACAGCCGATACATCATCAC+GGG	+	chr4.2:23221971-23221990	None:intergenic	50.0%
	CCGGATCATCACCAATCTCA+AGG	+	chr4.2:23221912-23221931	None:intergenic	50.0%
	GCTTACTATCGTGGAGCTGT+TGG	-	chr4.2:23221604-23221623	MS.gene39542:intron	50.0%
	GGGATACTGCTGGTCAAGAA+AGG	-	chr4.2:23220712-23220731	MS.gene39542:CDS	50.0%
	GTTGACGCAGATCTATCGTG+TGG	-	chr4.2:23221873-23221892	MS.gene39542:CDS	50.0%
	TGTCCCTTAGGTAAAGCAGC+CGG	+	chr4.2:23221931-23221950	None:intergenic	50.0%
!	AAGCTTGCTCGGTCGAAACT+GGG	+	chr4.2:23221029-23221048	None:intergenic	50.0%
!	GATCCGGCTGCTTTACCTAA+GGG	-	chr4.2:23221925-23221944	MS.gene39542:CDS	50.0%
!	GCTCAGATTTGGGATACTGC+TGG	-	chr4.2:23220702-23220721	MS.gene39542:CDS	50.0%
!	TGATCCGGCTGCTTTACCTA+AGG	-	chr4.2:23221924-23221943	MS.gene39542:CDS	50.0%
!	TGGGTCCCGTGATGATGTAT+CGG	-	chr4.2:23221963-23221982	MS.gene39542:CDS	50.0%
!!	GTATCGGCTGTGAAGAAAGC+TGG	-	chr4.2:23221979-23221998	MS.gene39542:CDS	50.0%
	AGCGGAGAAGCTGTTTGCAC+GGG	-	chr4.2:23221072-23221091	MS.gene39542:intron	55.0%
	CTTGTGGTTTAGTCGGGTGC+GGG	-	chr4.2:23221046-23221065	MS.gene39542:intron	55.0%
	GAGCGGAGAAGCTGTTTGCA+CGG	-	chr4.2:23221071-23221090	MS.gene39542:intron	55.0%
	GCTTGTGGTTTAGTCGGGTG+CGG	-	chr4.2:23221045-23221064	MS.gene39542:intron	55.0%
	GTTTCGACCGAGCAAGCTTG+TGG	-	chr4.2:23221030-23221049	MS.gene39542:intron	55.0%
	TATCCAGGTTGCGGTCGTCT+CGG	-	chr4.2:23221268-23221287	MS.gene39542:intron	55.0%
!	ATTCTCTGCGCGGTCGGTTT+GGG	-	chr4.2:23221119-23221138	MS.gene39542:intron	55.0%
!	CAAGCTTGCTCGGTCGAAAC+TGG	+	chr4.2:23221030-23221049	None:intergenic	55.0%
!	TTTGCACGGGCGGGTTTGTT+TGG	-	chr4.2:23221085-23221104	MS.gene39542:intron	55.0%
!!	GGTGGGTTATTTCGGGCTTC+AGG	+	chr4.2:23221223-23221242	None:intergenic	55.0%
	CATTCTCTGCGCGGTCGGTT+TGG	-	chr4.2:23221118-23221137	MS.gene39542:intron	60.0%
	CGACACATTCTCTGCGCGGT+CGG	-	chr4.2:23221113-23221132	MS.gene39542:intron	60.0%
	CGACCGCGCAGAGAATGTGT+CGG	+	chr4.2:23221115-23221134	None:intergenic	60.0%
	GACCGCGCAGAGAATGTGTC+GGG	+	chr4.2:23221114-23221133	None:intergenic	60.0%
	GAGAAGCTGTTTGCACGGGC+GGG	-	chr4.2:23221076-23221095	MS.gene39542:intron	60.0%
	GGAGAAGCTGTTTGCACGGG+CGG	-	chr4.2:23221075-23221094	MS.gene39542:intron	60.0%
	TGCCCGACACATTCTCTGCG+CGG	-	chr4.2:23221109-23221128	MS.gene39542:intron	60.0%
!	CGGTTGAACGTGGTCGGCTT+CGG	+	chr4.2:23221171-23221190	None:intergenic	60.0%
!	TTAGTCGGGTGCGGGTTGAG+CGG	-	chr4.2:23221054-23221073	MS.gene39542:intron	60.0%
	ACACCGAGACGACCGCAACC+TGG	+	chr4.2:23221274-23221293	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr4.2	gene	23220513	23222017	23220513	ID=MS.gene39542
chr4.2	mRNA	23220513	23222017	23220513	ID=MS.gene39542.t1;Parent=MS.gene39542
chr4.2	exon	23221797	23222017	23221797	ID=MS.gene39542.t1.exon1;Parent=MS.gene39542.t1
chr4.2	CDS	23221797	23222017	23221797	ID=cds.MS.gene39542.t1;Parent=MS.gene39542.t1
chr4.2	exon	23220513	23220945	23220513	ID=MS.gene39542.t1.exon2;Parent=MS.gene39542.t1
chr4.2	CDS	23220513	23220945	23220513	ID=cds.MS.gene39542.t1;Parent=MS.gene39542.t1

Gene Sequence

>MS.gene39542

ATGGGGGCATACAGAGCCGACGATGATTACGATTATCTATTCAAAGTGGTATTGATTGGTGATTCAGGTGTTGGTAAATCAAATCTTCTTTCTAGATTCACCAAAAACGAATTCAGTCTCGAATCTAAATCCACCATTGGTGTTGAATTCGCTACTAGAAGCATTCATGTTGATGATAAGGTTGTTAAAGCTCAGATTTGGGATACTGCTGGTCAAGAAAGGTATATATAAATCTCTATTTTCTTTTTTTTGTTGCATGTTTTGTAGTAATTTATAGCAAAATGGTTGTAAGTTATTTGGTAATTTGGTTAGGGTTGTGCATTAACTGTTGAATAATAGAGGAAATTACTAATGTAATGTCTGCTATTACGAATGTCATTTGGAGTGCCATGAATGGCTGAAATGAAAGTCAATATAGTAATGCTGTAAACAAGATAAACCTAATGATTAAGCATCGGTCGGTTTTGGTTCCGAAATGTAGATTTGAAGCAAACCGATGACCTGAAATATGCACCCAGTTTCGACCGAGCAAGCTTGTGGTTTAGTCGGGTGCGGGTTGAGCGGAGAAGCTGTTTGCACGGGCGGGTTTGTTTGGTTGCCCGACACATTCTCTGCGCGGTCGGTTTGGGTCACCACCAACATGAAAATATCAAAACCGAAGCCGACCACGTTCAACCGTTTGTAACCACAATTTTTTGATAAGGCAACCTGAAGCCCGAAATAACCCACCCAATGCACTTAATTGTTAAACGGTTTATCCAGGTTGCGGTCGTCTCGGTGTTCTTGCTCACCCCTAAGTGAGAATGCTCGACAAGATATTAATAAATAAAAACAAAACTAAAAAGACAAAAGTTAATATTCCATTTTTGGTGAATTACATTTTGGTTGTTTGATGATATCCTTTAACTTCCTCATCCTAATTAGGCTGTCAAATTACTAAAAAGGCGAAAATAATGTGAATATAATTTAATAAGACTGTTTCTAGATTCCATGTTACTAATGATCTACCCTACTGTATTTTATCAACTTTTCATATTACATGTTTATCTTAGTTTGCTTTTTTTCACTGAAGGTACCGAGCAATTACAAGTGCTTACTATCGTGGAGCTGTTGGCGCTTTGTTAGTCTATGATGTTACCCGCCATGTTACATTTGAAAATGTGGAGAGATGGCTAAAAGAGCTGAGAGATCACACAGATGCCAACATCGTCGTGATGCTTGTAGGCAACAAAGCAGACCTGCGTCATTTACGAGCAGTTTCGACCGAAGATGCTACAAGTTTTTCTGAACGGGAGAATACATATTTTATGGAGACATCTGCCCTTGAGTCCTTGAACGTTGAAAGTGCTTTCACCGAAGTGTTGACGCAGATCTATCGTGTGGTAAGCAAAAAGGCCCTTGAGATTGGTGATGATCCGGCTGCTTTACCTAAGGGACAGACGATTAATGTTGGGTCCCGTGATGATGTATCGGCTGTGAAGAAAGCTGGATGTTGTTCTGCTTGA

Protein sequence

>MS.gene39542.t1

MGAYRADDDYDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADLRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPAALPKGQTINVGSRDDVSAVKKAGCCSA