Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021166.t1 | XP_013456161.1 | 100 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 3.30E-114 | 421 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021166.t1 | Q40193 | 95.8 | 216 | 8 | 1 | 1 | 215 | 1 | 216 | 1.7e-111 | 403.3 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021166.t1 | I3S111 | 100.0 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 2.4e-114 | 421.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021166.t1 | MTR_4g064897 | 100.000 | 215 | 0 | 0 | 1 | 215 | 1 | 215 | 1.98e-161 | 444 |
MS.gene021166.t1 | MTR_3g069510 | 84.651 | 215 | 32 | 1 | 1 | 214 | 1 | 215 | 3.39e-134 | 375 |
MS.gene021166.t1 | MTR_2g005510 | 75.000 | 212 | 51 | 2 | 6 | 215 | 9 | 220 | 8.14e-117 | 332 |
MS.gene021166.t1 | MTR_2g075950 | 68.692 | 214 | 66 | 1 | 3 | 215 | 4 | 217 | 1.46e-109 | 313 |
MS.gene021166.t1 | MTR_2g014990 | 68.519 | 216 | 63 | 3 | 2 | 214 | 3 | 216 | 5.76e-106 | 304 |
MS.gene021166.t1 | MTR_4g088090 | 67.593 | 216 | 65 | 3 | 2 | 214 | 3 | 216 | 6.84e-105 | 301 |
MS.gene021166.t1 | MTR_2g083860 | 69.626 | 214 | 63 | 2 | 3 | 214 | 4 | 217 | 1.31e-104 | 301 |
MS.gene021166.t1 | MTR_4g079350 | 67.593 | 216 | 65 | 3 | 2 | 214 | 3 | 216 | 1.61e-104 | 300 |
MS.gene021166.t1 | MTR_2g090865 | 67.136 | 213 | 66 | 3 | 5 | 215 | 4 | 214 | 6.52e-101 | 291 |
MS.gene021166.t1 | MTR_8g089985 | 65.566 | 212 | 69 | 1 | 6 | 213 | 11 | 222 | 3.44e-97 | 282 |
MS.gene021166.t1 | MTR_3g086980 | 63.208 | 212 | 74 | 1 | 6 | 213 | 10 | 221 | 1.13e-95 | 278 |
MS.gene021166.t1 | MTR_1g052475 | 62.617 | 214 | 74 | 3 | 6 | 213 | 9 | 222 | 1.61e-92 | 270 |
MS.gene021166.t1 | MTR_0262s0050 | 62.802 | 207 | 74 | 2 | 10 | 213 | 13 | 219 | 1.57e-91 | 268 |
MS.gene021166.t1 | MTR_1g078200 | 58.491 | 212 | 81 | 2 | 10 | 214 | 12 | 223 | 1.40e-87 | 258 |
MS.gene021166.t1 | MTR_8g027220 | 61.458 | 192 | 74 | 0 | 3 | 194 | 17 | 208 | 1.18e-85 | 253 |
MS.gene021166.t1 | MTR_7g405790 | 55.556 | 207 | 89 | 1 | 11 | 214 | 14 | 220 | 8.51e-84 | 248 |
MS.gene021166.t1 | MTR_7g051940 | 56.373 | 204 | 89 | 0 | 11 | 214 | 12 | 215 | 2.73e-81 | 241 |
MS.gene021166.t1 | MTR_6g079550 | 54.630 | 216 | 95 | 3 | 1 | 214 | 1 | 215 | 7.13e-81 | 240 |
MS.gene021166.t1 | MTR_8g036220 | 53.394 | 221 | 93 | 3 | 5 | 215 | 8 | 228 | 8.89e-81 | 241 |
MS.gene021166.t1 | MTR_8g107070 | 53.883 | 206 | 94 | 1 | 6 | 210 | 8 | 213 | 5.19e-72 | 219 |
MS.gene021166.t1 | MTR_7g117910 | 52.500 | 200 | 79 | 2 | 2 | 201 | 10 | 193 | 1.29e-68 | 209 |
MS.gene021166.t1 | MTR_7g081700 | 46.445 | 211 | 104 | 2 | 5 | 215 | 1 | 202 | 1.18e-65 | 201 |
MS.gene021166.t1 | MTR_8g006970 | 47.573 | 206 | 100 | 2 | 10 | 215 | 20 | 217 | 3.36e-64 | 198 |
MS.gene021166.t1 | MTR_2g027660 | 45.755 | 212 | 106 | 3 | 9 | 214 | 3 | 211 | 6.22e-61 | 189 |
MS.gene021166.t1 | MTR_8g006970 | 52.663 | 169 | 80 | 0 | 5 | 173 | 1 | 169 | 1.23e-60 | 188 |
MS.gene021166.t1 | MTR_6g021790 | 54.430 | 158 | 72 | 0 | 9 | 166 | 3 | 160 | 3.37e-60 | 188 |
MS.gene021166.t1 | MTR_1g115325 | 45.755 | 212 | 101 | 5 | 8 | 213 | 11 | 214 | 7.90e-60 | 187 |
MS.gene021166.t1 | MTR_1g068740 | 44.495 | 218 | 107 | 5 | 4 | 215 | 7 | 216 | 3.04e-59 | 186 |
MS.gene021166.t1 | MTR_1g068730 | 44.037 | 218 | 108 | 5 | 4 | 215 | 7 | 216 | 1.09e-58 | 184 |
MS.gene021166.t1 | MTR_8g031660 | 44.928 | 207 | 110 | 2 | 9 | 214 | 3 | 206 | 1.37e-58 | 184 |
MS.gene021166.t1 | MTR_7g100020 | 45.327 | 214 | 103 | 5 | 8 | 215 | 11 | 216 | 5.38e-58 | 182 |
MS.gene021166.t1 | MTR_2g005500 | 46.316 | 190 | 101 | 1 | 7 | 195 | 4 | 193 | 2.47e-57 | 180 |
MS.gene021166.t1 | MTR_8g031870 | 55.128 | 156 | 70 | 0 | 11 | 166 | 5 | 160 | 3.78e-57 | 179 |
MS.gene021166.t1 | MTR_8g031830 | 45.366 | 205 | 100 | 3 | 11 | 214 | 5 | 198 | 4.64e-54 | 172 |
MS.gene021166.t1 | MTR_4g063160 | 42.326 | 215 | 105 | 4 | 8 | 213 | 11 | 215 | 5.08e-54 | 172 |
MS.gene021166.t1 | MTR_8g031680 | 50.000 | 166 | 83 | 0 | 9 | 174 | 3 | 168 | 1.90e-53 | 171 |
MS.gene021166.t1 | MTR_2g096550 | 47.059 | 170 | 88 | 2 | 6 | 173 | 9 | 178 | 2.27e-53 | 171 |
MS.gene021166.t1 | MTR_4g099470 | 45.087 | 173 | 86 | 2 | 43 | 215 | 15 | 178 | 3.05e-51 | 164 |
MS.gene021166.t1 | MTR_3g064390 | 42.781 | 187 | 99 | 2 | 14 | 197 | 12 | 193 | 1.65e-49 | 160 |
MS.gene021166.t1 | MTR_5g076590 | 42.781 | 187 | 99 | 2 | 14 | 197 | 12 | 193 | 3.28e-49 | 159 |
MS.gene021166.t1 | MTR_1g094220 | 48.101 | 158 | 81 | 1 | 14 | 170 | 33 | 190 | 3.23e-48 | 157 |
MS.gene021166.t1 | MTR_1g094220 | 48.408 | 157 | 80 | 1 | 14 | 169 | 33 | 189 | 4.74e-48 | 156 |
MS.gene021166.t1 | MTR_1g094220 | 48.101 | 158 | 81 | 1 | 14 | 170 | 33 | 190 | 8.29e-48 | 156 |
MS.gene021166.t1 | MTR_1g068730 | 50.758 | 132 | 65 | 0 | 4 | 135 | 7 | 138 | 1.97e-47 | 154 |
MS.gene021166.t1 | MTR_8g093740 | 37.799 | 209 | 120 | 5 | 7 | 213 | 8 | 208 | 2.40e-47 | 155 |
MS.gene021166.t1 | MTR_1g068740 | 50.000 | 134 | 67 | 0 | 4 | 137 | 7 | 140 | 4.65e-47 | 154 |
MS.gene021166.t1 | MTR_7g103070 | 41.827 | 208 | 113 | 4 | 9 | 214 | 13 | 214 | 5.72e-47 | 154 |
MS.gene021166.t1 | MTR_1g094220 | 48.387 | 155 | 79 | 1 | 14 | 167 | 33 | 187 | 7.34e-47 | 154 |
MS.gene021166.t1 | MTR_8g090215 | 36.408 | 206 | 118 | 3 | 13 | 214 | 10 | 206 | 2.89e-45 | 149 |
MS.gene021166.t1 | MTR_3g087160 | 41.401 | 157 | 92 | 0 | 13 | 169 | 10 | 166 | 3.00e-45 | 149 |
MS.gene021166.t1 | MTR_8g103550 | 36.453 | 203 | 112 | 3 | 14 | 214 | 11 | 198 | 4.80e-45 | 149 |
MS.gene021166.t1 | MTR_1g029450 | 38.278 | 209 | 120 | 5 | 8 | 214 | 13 | 214 | 6.75e-45 | 149 |
MS.gene021166.t1 | MTR_5g013900 | 36.893 | 206 | 117 | 2 | 13 | 214 | 10 | 206 | 8.09e-45 | 148 |
MS.gene021166.t1 | MTR_1g062760 | 45.349 | 172 | 91 | 3 | 9 | 178 | 11 | 181 | 8.98e-45 | 148 |
MS.gene021166.t1 | MTR_3g096350 | 37.963 | 216 | 122 | 7 | 1 | 213 | 1 | 207 | 1.99e-44 | 147 |
MS.gene021166.t1 | MTR_4g098950 | 34.634 | 205 | 122 | 2 | 13 | 214 | 10 | 205 | 3.82e-43 | 144 |
MS.gene021166.t1 | MTR_4g069850 | 38.462 | 208 | 110 | 5 | 12 | 212 | 8 | 204 | 3.95e-43 | 144 |
MS.gene021166.t1 | MTR_2g102060 | 38.614 | 202 | 111 | 3 | 14 | 215 | 12 | 200 | 9.40e-43 | 143 |
MS.gene021166.t1 | MTR_1g090717 | 43.353 | 173 | 95 | 3 | 9 | 178 | 12 | 184 | 4.58e-42 | 141 |
MS.gene021166.t1 | MTR_3g064390 | 47.200 | 125 | 66 | 0 | 14 | 138 | 12 | 136 | 1.88e-38 | 130 |
MS.gene021166.t1 | MTR_4g012940 | 35.885 | 209 | 116 | 5 | 12 | 213 | 8 | 205 | 3.03e-38 | 132 |
MS.gene021166.t1 | MTR_2g101890 | 40.000 | 165 | 92 | 3 | 12 | 169 | 10 | 174 | 4.52e-38 | 131 |
MS.gene021166.t1 | MTR_3g096350 | 46.565 | 131 | 65 | 4 | 1 | 128 | 1 | 129 | 1.66e-36 | 125 |
MS.gene021166.t1 | MTR_3g096350 | 46.565 | 131 | 65 | 4 | 1 | 128 | 1 | 129 | 4.23e-36 | 124 |
MS.gene021166.t1 | MTR_1g097420 | 34.615 | 208 | 119 | 5 | 12 | 212 | 8 | 205 | 6.83e-36 | 125 |
MS.gene021166.t1 | MTR_8g092020 | 36.471 | 170 | 101 | 2 | 7 | 169 | 7 | 176 | 1.05e-35 | 125 |
MS.gene021166.t1 | MTR_7g103070 | 40.491 | 163 | 89 | 4 | 54 | 214 | 2 | 158 | 3.09e-32 | 114 |
MS.gene021166.t1 | MTR_8g093740 | 34.682 | 173 | 104 | 4 | 43 | 213 | 10 | 175 | 5.40e-32 | 114 |
MS.gene021166.t1 | MTR_6g039490 | 35.329 | 167 | 97 | 4 | 12 | 169 | 8 | 172 | 2.16e-31 | 114 |
MS.gene021166.t1 | MTR_1g097420 | 31.963 | 219 | 129 | 7 | 1 | 212 | 27 | 232 | 2.73e-30 | 112 |
MS.gene021166.t1 | MTR_1g069245 | 57.895 | 95 | 36 | 2 | 25 | 119 | 109 | 199 | 7.89e-28 | 105 |
MS.gene021166.t1 | MTR_2g005500 | 32.821 | 195 | 90 | 2 | 7 | 200 | 4 | 158 | 2.93e-27 | 102 |
MS.gene021166.t1 | MTR_3g107717 | 31.667 | 180 | 115 | 3 | 13 | 187 | 14 | 190 | 6.80e-25 | 97.8 |
MS.gene021166.t1 | MTR_3g107707 | 31.667 | 180 | 115 | 3 | 13 | 187 | 14 | 190 | 7.32e-25 | 97.4 |
MS.gene021166.t1 | MTR_3g107713 | 31.667 | 180 | 115 | 3 | 13 | 187 | 14 | 190 | 7.88e-25 | 97.4 |
MS.gene021166.t1 | MTR_8g031810 | 45.192 | 104 | 43 | 1 | 11 | 114 | 5 | 94 | 8.75e-24 | 91.3 |
MS.gene021166.t1 | MTR_2g078000 | 77.551 | 49 | 11 | 0 | 73 | 121 | 46 | 94 | 8.41e-23 | 89.0 |
MS.gene021166.t1 | MTR_6g087980 | 29.293 | 198 | 123 | 6 | 12 | 194 | 6 | 201 | 2.65e-20 | 85.5 |
MS.gene021166.t1 | MTR_4g088055 | 31.737 | 167 | 100 | 6 | 12 | 166 | 6 | 170 | 7.66e-20 | 84.0 |
MS.gene021166.t1 | MTR_2g090875 | 31.737 | 167 | 100 | 5 | 12 | 166 | 6 | 170 | 8.42e-20 | 83.6 |
MS.gene021166.t1 | MTR_4g113620 | 31.720 | 186 | 100 | 7 | 13 | 188 | 14 | 182 | 1.41e-19 | 83.6 |
MS.gene021166.t1 | MTR_1452s0010 | 41.772 | 79 | 46 | 0 | 32 | 110 | 1 | 79 | 2.33e-19 | 80.1 |
MS.gene021166.t1 | MTR_4g073250 | 31.757 | 148 | 91 | 4 | 12 | 158 | 6 | 144 | 7.66e-19 | 81.3 |
MS.gene021166.t1 | MTR_3g078260 | 30.539 | 167 | 102 | 5 | 12 | 166 | 8 | 172 | 1.28e-18 | 80.9 |
MS.gene021166.t1 | MTR_8g075240 | 32.609 | 138 | 83 | 4 | 12 | 148 | 6 | 134 | 5.51e-18 | 79.0 |
MS.gene021166.t1 | MTR_2g078560 | 73.913 | 46 | 12 | 0 | 74 | 119 | 54 | 99 | 1.95e-17 | 79.3 |
MS.gene021166.t1 | MTR_5g022600 | 31.884 | 138 | 84 | 4 | 12 | 148 | 6 | 134 | 8.05e-17 | 75.9 |
MS.gene021166.t1 | MTR_3g078260 | 34.483 | 116 | 73 | 3 | 12 | 126 | 8 | 121 | 2.51e-16 | 73.2 |
MS.gene021166.t1 | MTR_1g059590 | 30.909 | 165 | 104 | 4 | 9 | 173 | 395 | 549 | 4.85e-16 | 76.6 |
MS.gene021166.t1 | MTR_1g059590 | 30.909 | 165 | 104 | 4 | 9 | 173 | 428 | 582 | 5.24e-16 | 76.3 |
MS.gene021166.t1 | MTR_5g092060 | 28.824 | 170 | 113 | 2 | 13 | 176 | 105 | 272 | 8.94e-16 | 74.7 |
MS.gene021166.t1 | MTR_1686s0010 | 35.165 | 91 | 59 | 0 | 32 | 122 | 1 | 91 | 2.65e-15 | 68.9 |
MS.gene021166.t1 | MTR_3g053480 | 60.784 | 51 | 19 | 1 | 5 | 54 | 8 | 58 | 4.07e-15 | 67.8 |
MS.gene021166.t1 | MTR_8g099250 | 60.784 | 51 | 19 | 1 | 5 | 54 | 8 | 58 | 2.85e-14 | 65.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene021166.t1 | AT1G07410 | 90.233 | 215 | 20 | 1 | 1 | 215 | 1 | 214 | 1.75e-146 | 406 |
MS.gene021166.t1 | AT3G46830 | 86.175 | 217 | 28 | 1 | 1 | 215 | 1 | 217 | 1.58e-136 | 381 |
MS.gene021166.t1 | AT3G46830 | 86.175 | 217 | 28 | 1 | 1 | 215 | 1 | 217 | 1.58e-136 | 381 |
MS.gene021166.t1 | AT5G59150 | 85.714 | 217 | 29 | 1 | 1 | 215 | 1 | 217 | 2.98e-136 | 380 |
MS.gene021166.t1 | AT1G09630 | 74.537 | 216 | 54 | 1 | 1 | 215 | 1 | 216 | 5.44e-122 | 345 |
MS.gene021166.t1 | AT4G18800 | 70.283 | 212 | 61 | 2 | 3 | 214 | 4 | 213 | 1.46e-109 | 313 |
MS.gene021166.t1 | AT1G16920 | 69.626 | 214 | 63 | 2 | 2 | 214 | 3 | 215 | 8.41e-108 | 309 |
MS.gene021166.t1 | AT5G45750 | 69.159 | 214 | 62 | 3 | 3 | 214 | 4 | 215 | 5.18e-107 | 306 |
MS.gene021166.t1 | AT5G60860 | 68.981 | 216 | 62 | 3 | 2 | 214 | 3 | 216 | 6.88e-106 | 304 |
MS.gene021166.t1 | AT1G06400 | 67.130 | 216 | 65 | 3 | 2 | 214 | 3 | 215 | 8.50e-104 | 298 |
MS.gene021166.t1 | AT1G28550 | 65.741 | 216 | 70 | 2 | 2 | 214 | 3 | 217 | 5.79e-103 | 296 |
MS.gene021166.t1 | AT3G15060 | 66.820 | 217 | 67 | 3 | 2 | 215 | 3 | 217 | 6.97e-103 | 296 |
MS.gene021166.t1 | AT2G33870 | 65.741 | 216 | 70 | 2 | 3 | 215 | 4 | 218 | 8.41e-103 | 296 |
MS.gene021166.t1 | AT4G18430 | 64.352 | 216 | 72 | 3 | 2 | 214 | 3 | 216 | 2.64e-101 | 292 |
MS.gene021166.t1 | AT5G47960 | 64.019 | 214 | 73 | 2 | 6 | 215 | 9 | 222 | 2.27e-97 | 283 |
MS.gene021166.t1 | AT5G59150 | 82.927 | 164 | 26 | 1 | 54 | 215 | 3 | 166 | 1.09e-95 | 276 |
MS.gene021166.t1 | AT3G12160 | 63.507 | 211 | 74 | 2 | 6 | 213 | 9 | 219 | 1.65e-94 | 275 |
MS.gene021166.t1 | AT5G65270 | 61.395 | 215 | 77 | 2 | 7 | 215 | 12 | 226 | 3.14e-93 | 272 |
MS.gene021166.t1 | AT4G39990 | 59.535 | 215 | 72 | 3 | 10 | 215 | 15 | 223 | 3.18e-90 | 265 |
MS.gene021166.t1 | AT5G47520 | 57.477 | 214 | 87 | 2 | 6 | 215 | 8 | 221 | 4.67e-87 | 256 |
MS.gene021166.t1 | AT3G07410 | 56.019 | 216 | 93 | 1 | 1 | 214 | 1 | 216 | 3.81e-83 | 246 |
MS.gene021166.t1 | AT1G05810 | 55.769 | 208 | 90 | 1 | 10 | 215 | 10 | 217 | 1.46e-82 | 245 |
MS.gene021166.t1 | AT1G05810 | 55.769 | 208 | 90 | 1 | 10 | 215 | 56 | 263 | 3.76e-82 | 245 |
MS.gene021166.t1 | AT2G31680 | 55.714 | 210 | 88 | 2 | 10 | 215 | 10 | 218 | 5.61e-82 | 243 |
MS.gene021166.t1 | AT1G73640 | 56.039 | 207 | 86 | 1 | 6 | 207 | 7 | 213 | 2.23e-81 | 242 |
MS.gene021166.t1 | AT2G43130 | 62.428 | 173 | 65 | 0 | 10 | 182 | 10 | 182 | 2.44e-79 | 236 |
MS.gene021166.t1 | AT1G18200 | 52.036 | 221 | 93 | 2 | 6 | 213 | 7 | 227 | 5.60e-78 | 234 |
MS.gene021166.t1 | AT1G01200 | 59.574 | 188 | 73 | 2 | 10 | 194 | 26 | 213 | 2.87e-75 | 227 |
MS.gene021166.t1 | AT1G02130 | 46.919 | 211 | 104 | 2 | 5 | 215 | 1 | 203 | 1.87e-67 | 206 |
MS.gene021166.t1 | AT5G47200 | 46.445 | 211 | 104 | 2 | 5 | 215 | 1 | 202 | 7.79e-66 | 202 |
MS.gene021166.t1 | AT4G17530 | 46.445 | 211 | 104 | 2 | 5 | 215 | 1 | 202 | 8.05e-66 | 202 |
MS.gene021166.t1 | AT4G35860 | 48.325 | 209 | 103 | 3 | 9 | 213 | 3 | 210 | 5.48e-64 | 197 |
MS.gene021166.t1 | AT3G11730 | 46.411 | 209 | 106 | 2 | 5 | 213 | 1 | 203 | 6.67e-62 | 192 |
MS.gene021166.t1 | AT4G17170 | 45.972 | 211 | 105 | 3 | 9 | 213 | 3 | 210 | 4.55e-61 | 190 |
MS.gene021166.t1 | AT3G53610 | 45.327 | 214 | 103 | 4 | 8 | 215 | 11 | 216 | 6.87e-60 | 187 |
MS.gene021166.t1 | AT3G53610 | 45.327 | 214 | 103 | 4 | 8 | 215 | 11 | 216 | 6.87e-60 | 187 |
MS.gene021166.t1 | AT3G53610 | 45.327 | 214 | 103 | 4 | 8 | 215 | 11 | 216 | 6.87e-60 | 187 |
MS.gene021166.t1 | AT5G59840 | 43.056 | 216 | 105 | 3 | 8 | 215 | 11 | 216 | 9.56e-59 | 184 |
MS.gene021166.t1 | AT5G03520 | 45.283 | 212 | 111 | 3 | 4 | 214 | 7 | 214 | 1.01e-58 | 184 |
MS.gene021166.t1 | AT3G09900 | 44.340 | 212 | 115 | 3 | 4 | 214 | 7 | 216 | 2.00e-58 | 184 |
MS.gene021166.t1 | AT4G17160 | 45.146 | 206 | 108 | 2 | 9 | 213 | 3 | 204 | 3.33e-58 | 182 |
MS.gene021166.t1 | AT3G46060 | 44.498 | 209 | 112 | 2 | 8 | 215 | 11 | 216 | 3.69e-58 | 183 |
MS.gene021166.t1 | AT3G46060 | 44.498 | 209 | 112 | 2 | 8 | 215 | 11 | 216 | 3.69e-58 | 183 |
MS.gene021166.t1 | AT3G46060 | 44.498 | 209 | 112 | 2 | 8 | 215 | 11 | 216 | 3.69e-58 | 183 |
MS.gene021166.t1 | AT3G54840 | 49.682 | 157 | 78 | 1 | 14 | 169 | 35 | 191 | 9.28e-50 | 161 |
MS.gene021166.t1 | AT3G54840 | 49.359 | 156 | 78 | 1 | 15 | 169 | 2 | 157 | 1.72e-49 | 159 |
MS.gene021166.t1 | AT4G19640 | 39.303 | 201 | 110 | 2 | 14 | 214 | 12 | 200 | 1.99e-49 | 160 |
MS.gene021166.t1 | AT3G54840 | 49.677 | 155 | 77 | 1 | 14 | 167 | 35 | 189 | 3.34e-49 | 159 |
MS.gene021166.t1 | AT5G45130 | 40.594 | 202 | 106 | 4 | 14 | 214 | 12 | 200 | 4.69e-48 | 156 |
MS.gene021166.t1 | AT1G43890 | 43.784 | 185 | 98 | 4 | 7 | 189 | 8 | 188 | 4.91e-47 | 154 |
MS.gene021166.t1 | AT1G43890 | 43.784 | 185 | 98 | 4 | 7 | 189 | 8 | 188 | 4.91e-47 | 154 |
MS.gene021166.t1 | AT1G43890 | 43.784 | 185 | 98 | 4 | 7 | 189 | 8 | 188 | 4.91e-47 | 154 |
MS.gene021166.t1 | AT5G45130 | 40.500 | 200 | 105 | 4 | 16 | 214 | 22 | 208 | 8.46e-47 | 154 |
MS.gene021166.t1 | AT5G03530 | 42.788 | 208 | 110 | 5 | 9 | 214 | 10 | 210 | 8.97e-47 | 154 |
MS.gene021166.t1 | AT5G03530 | 42.788 | 208 | 110 | 5 | 9 | 214 | 10 | 210 | 8.97e-47 | 154 |
MS.gene021166.t1 | AT4G35860 | 46.914 | 162 | 81 | 3 | 56 | 213 | 4 | 164 | 1.84e-45 | 149 |
MS.gene021166.t1 | AT4G39890 | 41.772 | 158 | 91 | 1 | 13 | 169 | 10 | 167 | 2.00e-44 | 147 |
MS.gene021166.t1 | AT5G03520 | 43.195 | 169 | 91 | 3 | 47 | 214 | 40 | 204 | 5.41e-44 | 146 |
MS.gene021166.t1 | AT5G10260 | 34.951 | 206 | 121 | 2 | 13 | 214 | 10 | 206 | 8.51e-43 | 143 |
MS.gene021166.t1 | AT2G44610 | 34.783 | 207 | 121 | 2 | 13 | 214 | 10 | 207 | 2.55e-42 | 142 |
MS.gene021166.t1 | AT2G22290 | 38.854 | 157 | 96 | 0 | 13 | 169 | 10 | 166 | 6.85e-42 | 141 |
MS.gene021166.t1 | AT3G18820 | 37.500 | 208 | 112 | 5 | 12 | 212 | 8 | 204 | 5.03e-41 | 139 |
MS.gene021166.t1 | AT1G52280 | 36.058 | 208 | 115 | 5 | 12 | 212 | 8 | 204 | 7.31e-40 | 135 |
MS.gene021166.t1 | AT5G64990 | 38.854 | 157 | 96 | 0 | 13 | 169 | 8 | 164 | 2.30e-39 | 134 |
MS.gene021166.t1 | AT4G19640 | 44.615 | 130 | 72 | 0 | 14 | 143 | 12 | 141 | 1.23e-38 | 130 |
MS.gene021166.t1 | AT4G19640 | 38.650 | 163 | 98 | 2 | 14 | 176 | 12 | 172 | 1.64e-38 | 132 |
MS.gene021166.t1 | AT1G49300 | 36.058 | 208 | 115 | 5 | 12 | 212 | 8 | 204 | 1.31e-37 | 130 |
MS.gene021166.t1 | AT1G49300 | 36.058 | 208 | 115 | 5 | 12 | 212 | 8 | 204 | 1.31e-37 | 130 |
MS.gene021166.t1 | AT3G09910 | 42.442 | 172 | 96 | 3 | 9 | 178 | 10 | 180 | 2.83e-37 | 129 |
MS.gene021166.t1 | AT3G09910 | 42.442 | 172 | 96 | 3 | 9 | 178 | 10 | 180 | 2.83e-37 | 129 |
MS.gene021166.t1 | AT3G09910 | 42.442 | 172 | 96 | 3 | 9 | 178 | 10 | 180 | 2.83e-37 | 129 |
MS.gene021166.t1 | AT3G16100 | 34.135 | 208 | 119 | 5 | 12 | 212 | 8 | 204 | 5.55e-37 | 128 |
MS.gene021166.t1 | AT5G64990 | 37.195 | 164 | 96 | 1 | 13 | 169 | 8 | 171 | 1.62e-36 | 127 |
MS.gene021166.t1 | AT3G09910 | 42.515 | 167 | 93 | 3 | 9 | 173 | 10 | 175 | 5.57e-36 | 125 |
MS.gene021166.t1 | AT3G09910 | 42.515 | 167 | 93 | 3 | 9 | 173 | 10 | 175 | 5.57e-36 | 125 |
MS.gene021166.t1 | AT1G22740 | 37.576 | 165 | 96 | 3 | 12 | 169 | 8 | 172 | 1.01e-35 | 125 |
MS.gene021166.t1 | AT2G21880 | 36.970 | 165 | 97 | 3 | 12 | 169 | 9 | 173 | 5.53e-35 | 123 |
MS.gene021166.t1 | AT4G09720 | 37.576 | 165 | 96 | 3 | 12 | 169 | 8 | 172 | 7.74e-35 | 123 |
MS.gene021166.t1 | AT4G09720 | 36.471 | 170 | 96 | 3 | 12 | 169 | 8 | 177 | 7.56e-34 | 120 |
MS.gene021166.t1 | AT5G46025 | 52.830 | 106 | 49 | 1 | 74 | 178 | 6 | 111 | 2.42e-33 | 116 |
MS.gene021166.t1 | AT4G09720 | 35.227 | 176 | 96 | 3 | 12 | 169 | 8 | 183 | 7.70e-33 | 118 |
MS.gene021166.t1 | AT5G39620 | 35.976 | 164 | 98 | 3 | 13 | 169 | 6 | 169 | 6.07e-30 | 110 |
MS.gene021166.t1 | AT4G08190 | 78.125 | 64 | 11 | 1 | 103 | 166 | 67 | 127 | 2.74e-28 | 103 |
MS.gene021166.t1 | AT2G21880 | 35.135 | 148 | 89 | 3 | 29 | 169 | 1 | 148 | 1.47e-26 | 101 |
MS.gene021166.t1 | AT2G21880 | 35.135 | 148 | 89 | 3 | 29 | 169 | 1 | 148 | 1.47e-26 | 101 |
MS.gene021166.t1 | AT5G55080 | 34.416 | 154 | 98 | 3 | 13 | 166 | 14 | 164 | 1.97e-26 | 101 |
MS.gene021166.t1 | AT2G21880 | 32.121 | 165 | 97 | 4 | 12 | 169 | 9 | 165 | 3.17e-25 | 98.2 |
MS.gene021166.t1 | AT5G20010 | 30.500 | 200 | 121 | 4 | 13 | 207 | 14 | 200 | 4.97e-25 | 98.2 |
MS.gene021166.t1 | AT5G20020 | 31.667 | 180 | 115 | 3 | 13 | 187 | 14 | 190 | 7.27e-25 | 97.8 |
MS.gene021166.t1 | AT5G55190 | 31.844 | 179 | 114 | 3 | 13 | 186 | 14 | 189 | 7.67e-25 | 97.4 |
MS.gene021166.t1 | AT4G09720 | 37.681 | 138 | 79 | 3 | 39 | 169 | 1 | 138 | 1.19e-24 | 95.9 |
MS.gene021166.t1 | AT4G09720 | 37.681 | 138 | 79 | 3 | 39 | 169 | 1 | 138 | 1.19e-24 | 95.9 |
MS.gene021166.t1 | AT4G09720 | 37.681 | 138 | 79 | 3 | 39 | 169 | 1 | 138 | 1.19e-24 | 95.9 |
MS.gene021166.t1 | AT2G44690 | 33.333 | 180 | 106 | 6 | 12 | 179 | 18 | 195 | 2.22e-24 | 96.3 |
MS.gene021166.t1 | AT4G28950 | 28.571 | 182 | 118 | 5 | 12 | 183 | 6 | 185 | 2.66e-20 | 85.5 |
MS.gene021166.t1 | AT4G35020 | 33.793 | 145 | 86 | 4 | 12 | 155 | 6 | 141 | 2.87e-20 | 85.1 |
MS.gene021166.t1 | AT4G35020 | 33.793 | 145 | 86 | 4 | 12 | 155 | 6 | 141 | 2.87e-20 | 85.1 |
MS.gene021166.t1 | AT4G35020 | 33.793 | 145 | 86 | 4 | 12 | 155 | 6 | 141 | 2.87e-20 | 85.1 |
MS.gene021166.t1 | AT3G48040 | 29.208 | 202 | 125 | 6 | 12 | 201 | 8 | 203 | 6.03e-20 | 84.3 |
MS.gene021166.t1 | AT3G48040 | 34.483 | 145 | 85 | 4 | 12 | 155 | 8 | 143 | 1.10e-19 | 83.2 |
MS.gene021166.t1 | AT5G62880 | 33.793 | 145 | 86 | 4 | 12 | 155 | 8 | 143 | 4.07e-19 | 81.6 |
MS.gene021166.t1 | AT5G62880 | 29.282 | 181 | 100 | 5 | 12 | 173 | 8 | 179 | 4.21e-19 | 82.4 |
MS.gene021166.t1 | AT5G45970 | 33.793 | 145 | 86 | 4 | 12 | 155 | 6 | 141 | 4.28e-19 | 82.0 |
MS.gene021166.t1 | AT1G75840 | 33.333 | 138 | 82 | 4 | 12 | 148 | 6 | 134 | 2.70e-18 | 79.7 |
MS.gene021166.t1 | AT1G20090 | 32.609 | 138 | 83 | 4 | 12 | 148 | 5 | 133 | 4.50e-18 | 79.0 |
MS.gene021166.t1 | AT3G51300 | 30.909 | 165 | 100 | 6 | 14 | 166 | 8 | 170 | 1.20e-17 | 78.2 |
MS.gene021166.t1 | AT4G35950 | 32.609 | 138 | 83 | 4 | 12 | 148 | 6 | 134 | 1.49e-17 | 77.8 |
MS.gene021166.t1 | AT2G17800 | 32.609 | 138 | 83 | 4 | 12 | 148 | 6 | 134 | 1.58e-17 | 77.8 |
MS.gene021166.t1 | AT2G17800 | 32.609 | 138 | 83 | 4 | 12 | 148 | 6 | 134 | 1.58e-17 | 77.8 |
MS.gene021166.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 14 | 126 | 8 | 119 | 1.09e-16 | 74.3 |
MS.gene021166.t1 | AT4G35020 | 35.088 | 114 | 71 | 3 | 14 | 126 | 8 | 119 | 1.09e-16 | 74.3 |
Find 55 sgRNAs with CRISPR-Local
Find 115 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAGGTGGCTGCGTGAATTA+AGG | 0.233394 | 4.4:+41530961 | MS.gene021166:CDS |
GACTGTAAAGGCACAGATTT+GGG | 0.346030 | 4.4:+41530827 | MS.gene021166:CDS |
GAACCATCTTAGAGCTGTTT+CGG | 0.347178 | 4.4:+41531037 | MS.gene021166:CDS |
ACCAACAGCTCCTCTGTAAT+AGG | 0.370535 | 4.4:-41530889 | None:intergenic |
TGGAAGTACCTGAAGGGTTC+TGG | 0.372210 | 4.4:-41529888 | None:intergenic |
TTGGAGTCTAAATCTACTAT+TGG | 0.376344 | 4.4:+41529851 | MS.gene021166:CDS |
ATGATAAATCTCTGTCAATA+TGG | 0.378805 | 4.4:-41531153 | None:intergenic |
ATTCGCCACCAGAACCCTTC+AGG | 0.400128 | 4.4:+41529880 | MS.gene021166:CDS |
AGACTGTAAAGGCACAGATT+TGG | 0.408612 | 4.4:+41530826 | MS.gene021166:CDS |
CAGGTGGCTGCGTGAATTAA+GGG | 0.408791 | 4.4:+41530962 | MS.gene021166:CDS |
CAACATTGATGGTGGTTCCT+TGG | 0.417789 | 4.4:-41531232 | None:intergenic |
GCAGCTGGTACCTCACTTCC+TGG | 0.431529 | 4.4:+41531209 | MS.gene021166:CDS |
ACAGCAGCCTCTCTTTGTAT+TGG | 0.436355 | 4.4:-41531267 | None:intergenic |
GTAAATCCAACATTCTCTCT+AGG | 0.462112 | 4.4:+41529807 | MS.gene021166:CDS |
AAATCTCTGTCAATATGGTC+TGG | 0.463166 | 4.4:-41531148 | None:intergenic |
GATTTGGGACACAGCCGGTC+AGG | 0.472434 | 4.4:+41530842 | MS.gene021166:CDS |
CTGGAATGCCTTCTCAATGT+TGG | 0.480200 | 4.4:-41531129 | None:intergenic |
TTGATCGGAGATTCTGGTGT+TGG | 0.486858 | 4.4:+41529785 | MS.gene021166:CDS |
GAGAAGATCTATGGCGCATA+GGG | 0.496739 | 4.4:+41529727 | None:intergenic |
TTGATGGTGGTTCCTTGGCC+AGG | 0.497262 | 4.4:-41531227 | None:intergenic |
CCACCTGTTGACATTGTCAA+AGG | 0.506270 | 4.4:-41530946 | None:intergenic |
AAACCTTTGACAATGTCAAC+AGG | 0.509017 | 4.4:+41530943 | MS.gene021166:CDS |
TTGTATATGACATTACTAAG+AGG | 0.510206 | 4.4:+41530919 | MS.gene021166:CDS |
CGGTCAAGCATTGGCAGAGA+AGG | 0.513673 | 4.4:+41531067 | MS.gene021166:CDS |
CCTCCGAAACAGCTCTAAGA+TGG | 0.521686 | 4.4:-41531040 | None:intergenic |
GGAGGATGACGGTCAAGCAT+TGG | 0.525571 | 4.4:+41531058 | MS.gene021166:CDS |
AGATGAATCTGCAACATTGA+TGG | 0.526989 | 4.4:-41531243 | None:intergenic |
GCCTATTACAGAGGAGCTGT+TGG | 0.537767 | 4.4:+41530888 | MS.gene021166:CDS |
AGCTCCTCTGTAATAGGCAC+TGG | 0.538985 | 4.4:-41530883 | None:intergenic |
CTTGCAGCTCAGGAAGCAGC+TGG | 0.539441 | 4.4:+41531194 | MS.gene021166:CDS |
TGTAAACCTAGAGAGAATGT+TGG | 0.541295 | 4.4:-41529813 | None:intergenic |
GGTTCCTTGGCCAGGAAGTG+AGG | 0.548018 | 4.4:-41531219 | None:intergenic |
AACATAGTGATCATGATGGC+AGG | 0.549455 | 4.4:+41530999 | MS.gene021166:CDS |
AAGATCTATGGCGCATAGGG+TGG | 0.554795 | 4.4:+41529730 | None:intergenic |
GGAGAAGATCTATGGCGCAT+AGG | 0.558633 | 4.4:+41529726 | None:intergenic |
TGTCTTCCTCCACAGGTAGA+GGG | 0.565584 | 4.4:+41530801 | MS.gene021166:intron |
TGCACGGTACCGCTCCTGAC+CGG | 0.575514 | 4.4:-41530856 | None:intergenic |
GCACAGATTTGGGACACAGC+CGG | 0.589077 | 4.4:+41530837 | MS.gene021166:CDS |
AGAGCTGTTTCGGAGGATGA+CGG | 0.603075 | 4.4:+41531047 | MS.gene021166:CDS |
TCATCTGCCAATACAAAGAG+AGG | 0.610381 | 4.4:+41531260 | MS.gene021166:CDS |
ATTACCAGTGCCTATTACAG+AGG | 0.615988 | 4.4:+41530879 | MS.gene021166:CDS |
CCATCTTAGAGCTGTTTCGG+AGG | 0.619143 | 4.4:+41531040 | MS.gene021166:CDS |
GGTACCTCACTTCCTGGCCA+AGG | 0.623787 | 4.4:+41531215 | MS.gene021166:CDS |
CAAGCATTGGCAGAGAAGGA+AGG | 0.624298 | 4.4:+41531071 | MS.gene021166:CDS |
GGAAGCAACCAACATTGAGA+AGG | 0.627086 | 4.4:+41531121 | MS.gene021166:CDS |
AGAAATTGGAAGTACCTGAA+GGG | 0.628923 | 4.4:-41529894 | None:intergenic |
AATAGGCACTGGTAATTGCA+CGG | 0.632997 | 4.4:-41530872 | None:intergenic |
GGTAGAGGGAAAGACTGTAA+AGG | 0.636965 | 4.4:+41530815 | MS.gene021166:intron |
GGGACACAGCCGGTCAGGAG+CGG | 0.638848 | 4.4:+41530847 | MS.gene021166:CDS |
TTCTAACATAGTGATCATGA+TGG | 0.639950 | 4.4:+41530995 | MS.gene021166:CDS |
TCACTATGTTAGAATCCGCA+TGG | 0.651563 | 4.4:-41530986 | None:intergenic |
AAGTACCTGAAGGGTTCTGG+TGG | 0.681997 | 4.4:-41529885 | None:intergenic |
CCTTTGACAATGTCAACAGG+TGG | 0.683264 | 4.4:+41530946 | MS.gene021166:CDS |
GCGTGAATTAAGGGACCATG+CGG | 0.710292 | 4.4:+41530971 | MS.gene021166:CDS |
TGAATCTGCAACATTGATGG+TGG | 0.711567 | 4.4:-41531240 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAAAACTTAAATAACT+TGG | - | chr4.4:41530009-41530028 | None:intergenic | 10.0% |
!!! | GTTCGTAATATTTTTTAAAA+CGG | - | chr4.4:41530620-41530639 | None:intergenic | 15.0% |
!! | CTTAAATAACTTGGAAAATT+AGG | - | chr4.4:41530000-41530019 | None:intergenic | 20.0% |
!!! | ATTTTAAGTTATAACAACAG+AGG | - | chr4.4:41530650-41530669 | None:intergenic | 20.0% |
! | AGAAATCAAAAGAGAGAAAT+TGG | - | chr4.4:41529911-41529930 | None:intergenic | 25.0% |
! | ATGATAAATCTCTGTCAATA+TGG | - | chr4.4:41531156-41531175 | None:intergenic | 25.0% |
! | GGAAAATTAGGATTATTACA+AGG | - | chr4.4:41529988-41530007 | None:intergenic | 25.0% |
! | GTAACATTGTAATACAAACA+AGG | - | chr4.4:41530766-41530785 | None:intergenic | 25.0% |
! | TTGTATATGACATTACTAAG+AGG | + | chr4.4:41530919-41530938 | MS.gene021166:CDS | 25.0% |
! | TTGTATTACAATGTTACCAA+TGG | + | chr4.4:41530769-41530788 | MS.gene021166:intron | 25.0% |
!! | AAATTTTCTTTTGCTTGTGT+TGG | + | chr4.4:41530700-41530719 | MS.gene021166:intron | 25.0% |
!!! | TACAAGAAATGAGTTTTGTT+TGG | + | chr4.4:41529832-41529851 | MS.gene021166:CDS | 25.0% |
CCAATAAAATTACATTCACC+TGG | - | chr4.4:41530340-41530359 | None:intergenic | 30.0% | |
GGATTATTACAAGGATCAAT+CGG | - | chr4.4:41529979-41529998 | None:intergenic | 30.0% | |
TGATATATGGTGTAATGAAG+TGG | - | chr4.4:41530548-41530567 | None:intergenic | 30.0% | |
TTACAAATACACGCATTCAA+AGG | - | chr4.4:41529943-41529962 | None:intergenic | 30.0% | |
TTCTAACATAGTGATCATGA+TGG | + | chr4.4:41530995-41531014 | MS.gene021166:CDS | 30.0% | |
TTGGAGTCTAAATCTACTAT+TGG | + | chr4.4:41529851-41529870 | MS.gene021166:CDS | 30.0% | |
TTGTTTGAACTGATGGTATA+AGG | + | chr4.4:41530385-41530404 | MS.gene021166:intron | 30.0% | |
! | CCAGGTGAATGTAATTTTAT+TGG | + | chr4.4:41530337-41530356 | MS.gene021166:intron | 30.0% |
!! | TTGTTCAAGATCGTTTTGAT+CGG | + | chr4.4:41529770-41529789 | MS.gene021166:CDS | 30.0% |
AAACCTTTGACAATGTCAAC+AGG | + | chr4.4:41530943-41530962 | MS.gene021166:CDS | 35.0% | |
AAATCTCTGTCAATATGGTC+TGG | - | chr4.4:41531151-41531170 | None:intergenic | 35.0% | |
AAGGTGGAATCGAATTTAGT+TGG | - | chr4.4:41530461-41530480 | None:intergenic | 35.0% | |
AAGTTTCTGCTAGTACCTTT+CGG | + | chr4.4:41530313-41530332 | MS.gene021166:intron | 35.0% | |
ACCATATATCACCATTCCAA+AGG | + | chr4.4:41530557-41530576 | MS.gene021166:intron | 35.0% | |
AGATGAATCTGCAACATTGA+TGG | - | chr4.4:41531246-41531265 | None:intergenic | 35.0% | |
CTACATTGATCTTAGCCAAA+AGG | - | chr4.4:41530492-41530511 | None:intergenic | 35.0% | |
GAAGACAAAGAAACAACCAT+TGG | - | chr4.4:41530788-41530807 | None:intergenic | 35.0% | |
GTAAATCCAACATTCTCTCT+AGG | + | chr4.4:41529807-41529826 | MS.gene021166:CDS | 35.0% | |
TATGGTGTAATGAAGTGGAA+TGG | - | chr4.4:41530543-41530562 | None:intergenic | 35.0% | |
TGTAAACCTAGAGAGAATGT+TGG | - | chr4.4:41529816-41529835 | None:intergenic | 35.0% | |
TTTGAACTGATGGTATAAGG+TGG | + | chr4.4:41530388-41530407 | MS.gene021166:intron | 35.0% | |
! | AAATTCGATTCCACCTTTTC+CGG | + | chr4.4:41530464-41530483 | MS.gene021166:intron | 35.0% |
! | TTTTCTCGAAACATCTGCAT+TGG | + | chr4.4:41531100-41531119 | MS.gene021166:CDS | 35.0% |
!! | ACCTTTGGAATGGTGATATA+TGG | - | chr4.4:41530561-41530580 | None:intergenic | 35.0% |
!! | AGAAATTGGAAGTACCTGAA+GGG | - | chr4.4:41529897-41529916 | None:intergenic | 35.0% |
!! | GGTTCTGAATTCAGCATATT+TGG | - | chr4.4:41530236-41530255 | None:intergenic | 35.0% |
AACATAGTGATCATGATGGC+AGG | + | chr4.4:41530999-41531018 | MS.gene021166:CDS | 40.0% | |
AATTCAGAACCCCAATGGTT+TGG | + | chr4.4:41530245-41530264 | MS.gene021166:intron | 40.0% | |
ACTGATGGTATAAGGTGGAA+TGG | + | chr4.4:41530393-41530412 | MS.gene021166:intron | 40.0% | |
ACTTCACTCAACCAAACCAT+TGG | - | chr4.4:41530259-41530278 | None:intergenic | 40.0% | |
AGCTTCAATTGCTGTGATCA+AGG | + | chr4.4:41530106-41530125 | MS.gene021166:intron | 40.0% | |
AGTTTCTGCTAGTACCTTTC+GGG | + | chr4.4:41530314-41530333 | MS.gene021166:intron | 40.0% | |
ATTACCAGTGCCTATTACAG+AGG | + | chr4.4:41530879-41530898 | MS.gene021166:CDS | 40.0% | |
CTTCACTCAACCAAACCATT+GGG | - | chr4.4:41530258-41530277 | None:intergenic | 40.0% | |
GAACCATCTTAGAGCTGTTT+CGG | + | chr4.4:41531037-41531056 | MS.gene021166:CDS | 40.0% | |
GCTTCAATTGCTGTGATCAA+GGG | + | chr4.4:41530107-41530126 | MS.gene021166:intron | 40.0% | |
GTACTAGCAGAAACTTGAAC+CGG | - | chr4.4:41530309-41530328 | None:intergenic | 40.0% | |
TCAAACAAGCCTTCAAGCTT+CGG | - | chr4.4:41530373-41530392 | None:intergenic | 40.0% | |
TCACTATGTTAGAATCCGCA+TGG | - | chr4.4:41530989-41531008 | None:intergenic | 40.0% | |
TCATCTGCCAATACAAAGAG+AGG | + | chr4.4:41531260-41531279 | MS.gene021166:CDS | 40.0% | |
TGAATCTGCAACATTGATGG+TGG | - | chr4.4:41531243-41531262 | None:intergenic | 40.0% | |
TTCACTCAACCAAACCATTG+GGG | - | chr4.4:41530257-41530276 | None:intergenic | 40.0% | |
! | AATTCGATTCCACCTTTTCC+GGG | + | chr4.4:41530465-41530484 | MS.gene021166:intron | 40.0% |
! | AGACTGTAAAGGCACAGATT+TGG | + | chr4.4:41530826-41530845 | MS.gene021166:CDS | 40.0% |
! | GACTGTAAAGGCACAGATTT+GGG | + | chr4.4:41530827-41530846 | MS.gene021166:CDS | 40.0% |
! | TGAAGGCTTGTTTGAACTGA+TGG | + | chr4.4:41530378-41530397 | MS.gene021166:intron | 40.0% |
!! | AATAGGCACTGGTAATTGCA+CGG | - | chr4.4:41530875-41530894 | None:intergenic | 40.0% |
!! | ATCGTTTTGATCGGAGATTC+TGG | + | chr4.4:41529779-41529798 | MS.gene021166:CDS | 40.0% |
!! | GAGAAATTGGAAGTACCTGA+AGG | - | chr4.4:41529898-41529917 | None:intergenic | 40.0% |
AAACACTCACCGAAGCTTGA+AGG | + | chr4.4:41530361-41530380 | MS.gene021166:intron | 45.0% | |
ACAGCAGCCTCTCTTTGTAT+TGG | - | chr4.4:41531270-41531289 | None:intergenic | 45.0% | |
ACCAACAGCTCCTCTGTAAT+AGG | - | chr4.4:41530892-41530911 | None:intergenic | 45.0% | |
AGTGATGAGATGTCACTCCA+AGG | - | chr4.4:41530587-41530606 | None:intergenic | 45.0% | |
CCACCTGTTGACATTGTCAA+AGG | - | chr4.4:41530949-41530968 | None:intergenic | 45.0% | |
CCTTTGACAATGTCAACAGG+TGG | + | chr4.4:41530946-41530965 | MS.gene021166:CDS | 45.0% | |
CTGGAATGCCTTCTCAATGT+TGG | - | chr4.4:41531132-41531151 | None:intergenic | 45.0% | |
GGAAGCAACCAACATTGAGA+AGG | + | chr4.4:41531121-41531140 | MS.gene021166:CDS | 45.0% | |
GGTAGAGGGAAAGACTGTAA+AGG | + | chr4.4:41530815-41530834 | MS.gene021166:intron | 45.0% | |
GTTTCTTTGTCTTCCTCCAC+AGG | + | chr4.4:41530794-41530813 | MS.gene021166:intron | 45.0% | |
TGCTGAATTCAGAACCCCAA+TGG | + | chr4.4:41530240-41530259 | MS.gene021166:intron | 45.0% | |
TTGATCGGAGATTCTGGTGT+TGG | + | chr4.4:41529785-41529804 | MS.gene021166:CDS | 45.0% | |
! | ATTCGATTCCACCTTTTCCG+GGG | + | chr4.4:41530466-41530485 | MS.gene021166:intron | 45.0% |
! | TCCAAGGAACACCTTTGGAA+TGG | - | chr4.4:41530571-41530590 | None:intergenic | 45.0% |
!! | ACCATTCCAAAGGTGTTCCT+TGG | + | chr4.4:41530567-41530586 | MS.gene021166:intron | 45.0% |
!! | CAAAAAAGCACTTGCAGCTC+AGG | + | chr4.4:41531184-41531203 | MS.gene021166:CDS | 45.0% |
!! | CAACATTGATGGTGGTTCCT+TGG | - | chr4.4:41531235-41531254 | None:intergenic | 45.0% |
!!! | TTTTTTTTTTTTTTCATTTT+TGG | + | chr4.4:41530020-41530039 | MS.gene021166:intron | 5.0% |
ACAGGTGGCTGCGTGAATTA+AGG | + | chr4.4:41530961-41530980 | MS.gene021166:CDS | 50.0% | |
ACAGTCTTTCCCTCTACCTG+TGG | - | chr4.4:41530813-41530832 | None:intergenic | 50.0% | |
AGAAACTTGAACCGGCGACA+TGG | - | chr4.4:41530301-41530320 | None:intergenic | 50.0% | |
AGCTCCTCTGTAATAGGCAC+TGG | - | chr4.4:41530886-41530905 | None:intergenic | 50.0% | |
CAGGTGGCTGCGTGAATTAA+GGG | + | chr4.4:41530962-41530981 | MS.gene021166:CDS | 50.0% | |
GCCTATTACAGAGGAGCTGT+TGG | + | chr4.4:41530888-41530907 | MS.gene021166:CDS | 50.0% | |
GCGTGAATTAAGGGACCATG+CGG | + | chr4.4:41530971-41530990 | MS.gene021166:CDS | 50.0% | |
GTCACTCCAAGGAACACCTT+TGG | - | chr4.4:41530576-41530595 | None:intergenic | 50.0% | |
GTTTGTATGCACCATGTCGC+CGG | + | chr4.4:41530287-41530306 | MS.gene021166:intron | 50.0% | |
TGATCTTAGCCAAAAGGCCC+CGG | - | chr4.4:41530486-41530505 | None:intergenic | 50.0% | |
TGTCTTCCTCCACAGGTAGA+GGG | + | chr4.4:41530801-41530820 | MS.gene021166:intron | 50.0% | |
TTACATTCACCTGGCCCGAA+AGG | - | chr4.4:41530331-41530350 | None:intergenic | 50.0% | |
TTGTCTTCCTCCACAGGTAG+AGG | + | chr4.4:41530800-41530819 | MS.gene021166:intron | 50.0% | |
! | AAGTACCTGAAGGGTTCTGG+TGG | - | chr4.4:41529888-41529907 | None:intergenic | 50.0% |
! | AGAGCTGTTTCGGAGGATGA+CGG | + | chr4.4:41531047-41531066 | MS.gene021166:CDS | 50.0% |
! | CCATCTTAGAGCTGTTTCGG+AGG | + | chr4.4:41531040-41531059 | MS.gene021166:CDS | 50.0% |
!! | CAAGCATTGGCAGAGAAGGA+AGG | + | chr4.4:41531071-41531090 | MS.gene021166:CDS | 50.0% |
!! | CCTCCGAAACAGCTCTAAGA+TGG | - | chr4.4:41531043-41531062 | None:intergenic | 50.0% |
!! | TGGAAGTACCTGAAGGGTTC+TGG | - | chr4.4:41529891-41529910 | None:intergenic | 50.0% |
ATTCGCCACCAGAACCCTTC+AGG | + | chr4.4:41529880-41529899 | MS.gene021166:CDS | 55.0% | |
GTCTTTCCCTCTACCTGTGG+AGG | - | chr4.4:41530810-41530829 | None:intergenic | 55.0% | |
TAGCCAAAAGGCCCCGGAAA+AGG | - | chr4.4:41530480-41530499 | None:intergenic | 55.0% | |
! | GCACAGATTTGGGACACAGC+CGG | + | chr4.4:41530837-41530856 | MS.gene021166:CDS | 55.0% |
! | GGAGGATGACGGTCAAGCAT+TGG | + | chr4.4:41531058-41531077 | MS.gene021166:CDS | 55.0% |
!! | CGGTCAAGCATTGGCAGAGA+AGG | + | chr4.4:41531067-41531086 | MS.gene021166:CDS | 55.0% |
!! | TTGATGGTGGTTCCTTGGCC+AGG | - | chr4.4:41531230-41531249 | None:intergenic | 55.0% |
CCAAAAGGCCCCGGAAAAGG+TGG | - | chr4.4:41530477-41530496 | None:intergenic | 60.0% | |
CTGCTAGTACCTTTCGGGCC+AGG | + | chr4.4:41530319-41530338 | MS.gene021166:intron | 60.0% | |
CTTGCAGCTCAGGAAGCAGC+TGG | + | chr4.4:41531194-41531213 | MS.gene021166:CDS | 60.0% | |
GCAGCTGGTACCTCACTTCC+TGG | + | chr4.4:41531209-41531228 | MS.gene021166:CDS | 60.0% | |
GGTACCTCACTTCCTGGCCA+AGG | + | chr4.4:41531215-41531234 | MS.gene021166:CDS | 60.0% | |
GGTTCCTTGGCCAGGAAGTG+AGG | - | chr4.4:41531222-41531241 | None:intergenic | 60.0% | |
! | CCACCTTTTCCGGGGCCTTT+TGG | + | chr4.4:41530474-41530493 | MS.gene021166:intron | 60.0% |
! | GATTTGGGACACAGCCGGTC+AGG | + | chr4.4:41530842-41530861 | MS.gene021166:CDS | 60.0% |
TGCACGGTACCGCTCCTGAC+CGG | - | chr4.4:41530859-41530878 | None:intergenic | 65.0% | |
GGGACACAGCCGGTCAGGAG+CGG | + | chr4.4:41530847-41530866 | MS.gene021166:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.4 | gene | 41529737 | 41531298 | 41529737 | ID=MS.gene021166 |
chr4.4 | mRNA | 41529737 | 41531298 | 41529737 | ID=MS.gene021166.t1;Parent=MS.gene021166 |
chr4.4 | exon | 41529737 | 41529901 | 41529737 | ID=MS.gene021166.t1.exon1;Parent=MS.gene021166.t1 |
chr4.4 | CDS | 41529737 | 41529901 | 41529737 | ID=cds.MS.gene021166.t1;Parent=MS.gene021166.t1 |
chr4.4 | exon | 41530816 | 41531298 | 41530816 | ID=MS.gene021166.t1.exon2;Parent=MS.gene021166.t1 |
chr4.4 | CDS | 41530816 | 41531298 | 41530816 | ID=cds.MS.gene021166.t1;Parent=MS.gene021166.t1 |
Gene Sequence |
Protein sequence |