AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene75497


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75497.t1 MTR_3g086980 99.083 218 2 0 2 219 5 222 1.04e-163 450
MS.gene75497.t1 MTR_8g089985 89.954 219 21 1 2 219 6 224 6.92e-150 416
MS.gene75497.t1 MTR_1g052475 72.936 218 57 2 3 218 5 222 1.48e-115 329
MS.gene75497.t1 MTR_0262s0050 72.558 215 59 0 3 217 5 219 1.01e-114 327
MS.gene75497.t1 MTR_8g027220 65.438 217 67 2 5 217 18 230 6.77e-97 282
MS.gene75497.t1 MTR_4g064897 62.736 212 75 1 7 218 6 213 1.26e-94 275
MS.gene75497.t1 MTR_2g005510 60.664 211 81 1 8 218 10 218 3.20e-92 270
MS.gene75497.t1 MTR_3g069510 61.468 218 79 3 1 217 1 214 2.29e-91 267
MS.gene75497.t1 MTR_8g036220 56.561 221 90 3 4 218 6 226 6.07e-90 264
MS.gene75497.t1 MTR_2g075950 58.879 214 85 3 6 219 6 216 2.66e-89 262
MS.gene75497.t1 MTR_2g083860 65.000 180 63 0 6 185 6 185 1.19e-87 258
MS.gene75497.t1 MTR_2g014990 57.273 220 87 3 1 218 1 215 1.59e-87 258
MS.gene75497.t1 MTR_4g088090 55.455 220 91 2 1 218 1 215 6.81e-87 256
MS.gene75497.t1 MTR_4g079350 55.455 220 91 2 1 218 1 215 3.51e-86 254
MS.gene75497.t1 MTR_2g090865 55.814 215 91 1 4 218 2 212 7.06e-86 253
MS.gene75497.t1 MTR_1g078200 55.405 222 95 2 1 218 1 222 6.11e-85 251
MS.gene75497.t1 MTR_7g405790 55.924 211 84 2 12 218 14 219 1.07e-82 245
MS.gene75497.t1 MTR_7g051940 56.250 208 85 2 12 218 12 214 1.67e-79 237
MS.gene75497.t1 MTR_7g117910 59.024 205 65 3 8 211 15 201 5.68e-79 236
MS.gene75497.t1 MTR_6g079550 51.415 212 100 1 7 218 6 214 3.07e-74 224
MS.gene75497.t1 MTR_8g107070 52.381 210 99 1 7 216 8 216 1.62e-71 219
MS.gene75497.t1 MTR_2g027660 46.193 197 101 2 12 208 5 196 2.80e-60 188
MS.gene75497.t1 MTR_6g021790 51.515 165 80 0 11 175 4 168 1.10e-59 187
MS.gene75497.t1 MTR_8g031870 53.503 157 73 0 12 168 5 161 1.18e-58 183
MS.gene75497.t1 MTR_8g031660 50.610 164 81 0 12 175 5 168 1.60e-58 184
MS.gene75497.t1 MTR_8g006970 45.192 208 102 2 11 218 20 215 1.91e-58 184
MS.gene75497.t1 MTR_8g006970 51.786 168 81 0 7 174 2 169 1.19e-57 180
MS.gene75497.t1 MTR_7g081700 43.396 212 107 2 7 218 2 200 2.64e-57 180
MS.gene75497.t1 MTR_2g005500 42.723 213 110 2 6 218 2 202 1.42e-56 178
MS.gene75497.t1 MTR_8g031680 49.390 164 83 0 12 175 5 168 1.19e-54 174
MS.gene75497.t1 MTR_1g115325 42.105 209 113 3 11 218 13 214 1.62e-54 174
MS.gene75497.t1 MTR_1g068740 47.059 170 89 1 6 174 8 177 3.47e-54 173
MS.gene75497.t1 MTR_7g100020 47.879 165 85 1 11 174 13 177 9.21e-54 172
MS.gene75497.t1 MTR_1g068730 46.471 170 90 1 6 174 8 177 9.72e-54 172
MS.gene75497.t1 MTR_8g031830 51.634 153 74 0 12 164 5 157 1.48e-52 168
MS.gene75497.t1 MTR_4g063160 41.232 211 113 4 11 218 13 215 3.61e-51 165
MS.gene75497.t1 MTR_2g096550 44.578 166 90 2 11 174 13 178 6.63e-49 159
MS.gene75497.t1 MTR_1g094220 46.154 182 88 4 2 177 23 200 7.84e-49 159
MS.gene75497.t1 MTR_1g094220 47.093 172 85 3 2 171 23 190 7.93e-49 159
MS.gene75497.t1 MTR_1g094220 47.904 167 83 2 2 167 23 186 8.77e-49 158
MS.gene75497.t1 MTR_1g094220 48.214 168 81 3 2 167 23 186 2.85e-48 158
MS.gene75497.t1 MTR_3g064390 46.795 156 83 0 15 170 12 167 2.85e-48 157
MS.gene75497.t1 MTR_8g093740 38.350 206 115 4 1 195 1 205 5.55e-47 154
MS.gene75497.t1 MTR_5g076590 41.176 204 104 4 15 218 12 199 8.22e-47 153
MS.gene75497.t1 MTR_8g103550 37.745 204 110 2 15 218 11 197 3.39e-46 152
MS.gene75497.t1 MTR_4g099470 42.857 175 87 2 44 218 15 176 3.65e-46 151
MS.gene75497.t1 MTR_1g068740 41.916 167 86 2 6 171 8 164 4.72e-45 149
MS.gene75497.t1 MTR_3g096350 37.559 213 119 5 8 218 7 207 1.93e-44 147
MS.gene75497.t1 MTR_1g068730 48.855 131 67 0 6 136 8 138 2.64e-44 146
MS.gene75497.t1 MTR_1g029450 37.264 212 120 5 9 218 13 213 3.04e-44 147
MS.gene75497.t1 MTR_2g102060 42.308 156 90 0 15 170 12 167 6.29e-44 146
MS.gene75497.t1 MTR_3g087160 39.610 154 93 0 14 167 10 163 1.80e-42 142
MS.gene75497.t1 MTR_8g090215 36.571 175 106 1 14 183 10 184 2.06e-42 142
MS.gene75497.t1 MTR_5g013900 39.610 154 93 0 14 167 10 163 3.24e-42 142
MS.gene75497.t1 MTR_7g103070 45.283 159 85 2 11 167 14 172 3.95e-42 142
MS.gene75497.t1 MTR_1g090717 42.286 175 98 3 6 177 8 182 6.18e-41 139
MS.gene75497.t1 MTR_4g098950 37.662 154 96 0 14 167 10 163 9.47e-41 138
MS.gene75497.t1 MTR_1g062760 42.012 169 95 3 11 177 12 179 7.43e-40 136
MS.gene75497.t1 MTR_3g064390 46.400 125 67 0 15 139 12 136 5.08e-37 127
MS.gene75497.t1 MTR_8g092020 38.182 165 95 3 13 170 12 176 8.85e-35 123
MS.gene75497.t1 MTR_4g069850 38.788 165 94 3 13 170 8 172 1.22e-34 122
MS.gene75497.t1 MTR_1g097420 38.788 165 94 3 13 170 8 172 2.21e-34 122
MS.gene75497.t1 MTR_3g096350 40.714 140 77 4 8 145 7 142 2.01e-33 117
MS.gene75497.t1 MTR_3g096350 44.355 124 66 3 8 129 7 129 8.20e-33 116
MS.gene75497.t1 MTR_2g101890 37.576 165 96 3 13 170 10 174 1.00e-32 117
MS.gene75497.t1 MTR_4g012940 37.576 165 96 3 13 170 8 172 1.27e-32 117
MS.gene75497.t1 MTR_6g039490 38.182 165 95 4 13 170 8 172 1.53e-32 117
MS.gene75497.t1 MTR_8g093740 35.583 163 94 3 44 195 10 172 6.14e-32 114
MS.gene75497.t1 MTR_1g097420 36.527 167 97 4 11 170 35 199 1.77e-29 110
MS.gene75497.t1 MTR_2g005500 31.925 213 93 3 6 218 2 162 1.28e-27 103
MS.gene75497.t1 MTR_7g103070 44.348 115 62 2 55 167 2 116 1.91e-27 102
MS.gene75497.t1 MTR_8g031810 44.231 104 44 1 12 115 5 94 7.03e-24 91.7
MS.gene75497.t1 MTR_3g107713 28.986 207 130 5 8 211 7 199 1.00e-23 94.7
MS.gene75497.t1 MTR_3g107707 28.986 207 130 5 8 211 7 199 1.03e-23 94.7
MS.gene75497.t1 MTR_3g107717 29.126 206 129 5 8 210 7 198 4.11e-23 93.2
MS.gene75497.t1 MTR_1g069245 46.316 95 47 2 26 120 109 199 2.03e-21 88.6
MS.gene75497.t1 MTR_2g090875 33.333 165 96 5 15 167 8 170 5.45e-21 87.0
MS.gene75497.t1 MTR_3g078260 28.856 201 129 5 15 203 10 208 2.89e-20 85.5
MS.gene75497.t1 MTR_6g087980 29.412 187 118 5 15 189 8 192 3.92e-20 85.1
MS.gene75497.t1 MTR_2g078000 65.306 49 17 0 74 122 46 94 6.77e-20 81.6
MS.gene75497.t1 MTR_4g088055 30.909 165 100 5 15 167 8 170 8.34e-20 84.0
MS.gene75497.t1 MTR_1452s0010 46.835 79 42 0 33 111 1 79 5.72e-19 79.0
MS.gene75497.t1 MTR_4g073250 35.294 119 74 3 15 132 8 124 2.82e-18 79.7
MS.gene75497.t1 MTR_8g075240 31.325 166 98 6 15 167 8 170 1.57e-17 77.8
MS.gene75497.t1 MTR_5g022600 31.325 166 98 6 15 167 8 170 4.76e-17 76.6
MS.gene75497.t1 MTR_4g113620 26.761 213 130 7 8 217 7 196 1.45e-16 75.5
MS.gene75497.t1 MTR_3g078260 34.211 114 72 3 15 127 10 121 8.99e-16 72.0
MS.gene75497.t1 MTR_1686s0010 38.043 92 57 0 33 124 1 92 2.37e-15 69.3
MS.gene75497.t1 MTR_2g078560 48.485 66 28 1 73 132 52 117 2.62e-15 73.6
MS.gene75497.t1 MTR_1g059590 31.447 159 102 3 16 174 398 549 3.09e-15 74.3
MS.gene75497.t1 MTR_1g059590 31.447 159 102 3 16 174 431 582 3.27e-15 74.3
MS.gene75497.t1 MTR_3g053480 54.717 53 24 0 7 59 10 62 2.36e-14 65.9
MS.gene75497.t1 MTR_8g099250 56.863 51 22 0 7 57 10 60 7.79e-14 64.7
MS.gene75497.t1 MTR_5g092060 26.744 172 114 5 14 177 105 272 2.52e-13 67.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene75497.t1 AT5G65270 85.845 219 29 2 2 218 6 224 8.63e-138 385
MS.gene75497.t1 AT4G39990 80.569 211 38 2 9 218 13 221 6.36e-126 355
MS.gene75497.t1 AT3G12160 75.926 216 51 1 3 218 5 219 2.38e-123 348
MS.gene75497.t1 AT5G47960 74.057 212 54 1 7 217 9 220 1.03e-114 327
MS.gene75497.t1 AT1G09630 60.190 211 82 1 7 217 6 214 2.11e-94 275
MS.gene75497.t1 AT1G07410 60.849 212 78 1 7 218 6 212 3.54e-93 272
MS.gene75497.t1 AT4G18800 60.563 213 78 2 6 218 6 212 4.17e-91 266
MS.gene75497.t1 AT1G16920 61.058 208 77 2 11 218 11 214 4.11e-90 264
MS.gene75497.t1 AT4G18430 56.364 220 89 2 1 218 1 215 7.43e-90 263
MS.gene75497.t1 AT5G45750 60.563 213 80 2 6 218 6 214 1.50e-89 263
MS.gene75497.t1 AT3G46830 69.143 175 54 0 7 181 6 180 2.79e-89 262
MS.gene75497.t1 AT3G46830 69.143 175 54 0 7 181 6 180 2.79e-89 262
MS.gene75497.t1 AT2G33870 57.273 220 88 2 1 218 1 216 5.04e-89 261
MS.gene75497.t1 AT5G59150 69.540 174 53 0 8 181 7 180 1.64e-88 260
MS.gene75497.t1 AT1G28550 58.182 220 86 2 1 218 1 216 2.52e-88 259
MS.gene75497.t1 AT5G47520 57.604 217 90 2 3 218 4 219 2.13e-87 257
MS.gene75497.t1 AT1G01200 60.369 217 75 5 8 217 23 235 1.09e-86 256
MS.gene75497.t1 AT5G60860 57.674 215 84 3 6 218 6 215 1.97e-86 255
MS.gene75497.t1 AT1G06400 57.944 214 84 2 6 218 6 214 4.43e-86 254
MS.gene75497.t1 AT3G15060 56.744 215 86 3 6 218 6 215 1.90e-85 252
MS.gene75497.t1 AT1G05810 63.636 176 64 0 11 186 10 185 2.19e-82 244
MS.gene75497.t1 AT1G05810 63.636 176 64 0 11 186 56 231 3.48e-82 246
MS.gene75497.t1 AT2G43130 54.808 208 89 1 11 218 10 212 6.19e-81 241
MS.gene75497.t1 AT2G31680 61.364 176 68 0 11 186 10 185 2.27e-80 239
MS.gene75497.t1 AT3G07410 63.068 176 65 0 11 186 10 185 7.57e-79 236
MS.gene75497.t1 AT1G73640 51.339 224 96 4 8 218 8 231 5.76e-75 226
MS.gene75497.t1 AT1G18200 51.707 205 95 2 7 211 7 207 1.59e-74 225
MS.gene75497.t1 AT5G59150 70.400 125 37 0 57 181 5 129 7.70e-62 191
MS.gene75497.t1 AT4G17170 44.076 211 109 3 12 218 5 210 1.12e-60 189
MS.gene75497.t1 AT1G02130 46.226 212 102 3 7 218 2 201 1.25e-60 189
MS.gene75497.t1 AT4G35860 43.192 213 110 2 11 218 4 210 1.83e-59 186
MS.gene75497.t1 AT4G17160 44.340 212 101 3 12 218 5 204 2.19e-59 186
MS.gene75497.t1 AT4G17530 44.811 212 104 2 7 218 2 200 1.60e-57 181
MS.gene75497.t1 AT5G47200 44.811 212 104 2 7 218 2 200 1.64e-57 181
MS.gene75497.t1 AT3G11730 45.455 209 102 5 11 218 6 203 1.85e-56 178
MS.gene75497.t1 AT5G59840 41.627 209 114 3 11 218 13 214 5.19e-54 172
MS.gene75497.t1 AT3G46060 41.627 209 114 3 11 218 13 214 5.67e-54 172
MS.gene75497.t1 AT3G46060 41.627 209 114 3 11 218 13 214 5.67e-54 172
MS.gene75497.t1 AT3G46060 41.627 209 114 3 11 218 13 214 5.67e-54 172
MS.gene75497.t1 AT5G03520 41.121 214 117 3 6 218 8 213 1.95e-52 168
MS.gene75497.t1 AT3G53610 46.667 165 87 1 11 174 13 177 2.35e-52 168
MS.gene75497.t1 AT3G53610 46.667 165 87 1 11 174 13 177 2.35e-52 168
MS.gene75497.t1 AT3G53610 46.667 165 87 1 11 174 13 177 2.35e-52 168
MS.gene75497.t1 AT3G54840 51.948 154 73 1 15 167 35 188 1.21e-51 166
MS.gene75497.t1 AT3G54840 51.948 154 73 1 15 167 35 188 2.04e-51 165
MS.gene75497.t1 AT3G09900 46.471 170 90 1 6 174 8 177 3.76e-51 165
MS.gene75497.t1 AT3G54840 51.634 153 73 1 16 167 2 154 7.55e-51 162
MS.gene75497.t1 AT1G43890 41.509 212 109 6 1 209 1 200 1.26e-47 156
MS.gene75497.t1 AT1G43890 41.509 212 109 6 1 209 1 200 1.26e-47 156
MS.gene75497.t1 AT1G43890 41.509 212 109 6 1 209 1 200 1.26e-47 156
MS.gene75497.t1 AT4G19640 37.745 204 111 1 15 218 12 199 1.66e-47 155
MS.gene75497.t1 AT5G45130 44.231 156 87 0 15 170 12 167 3.08e-45 149
MS.gene75497.t1 AT4G35860 52.066 121 58 0 55 175 2 122 1.76e-44 146
MS.gene75497.t1 AT5G45130 44.156 154 86 0 17 170 22 175 5.68e-44 146
MS.gene75497.t1 AT2G22290 40.260 154 92 0 14 167 10 163 5.29e-43 144
MS.gene75497.t1 AT5G10260 38.961 154 94 0 14 167 10 163 7.64e-42 141
MS.gene75497.t1 AT2G44610 38.312 154 95 0 14 167 10 163 3.72e-41 139
MS.gene75497.t1 AT4G39890 38.065 155 95 1 14 167 10 164 6.08e-41 139
MS.gene75497.t1 AT5G03530 35.874 223 124 5 1 218 1 209 6.82e-41 139
MS.gene75497.t1 AT5G03530 35.874 223 124 5 1 218 1 209 6.82e-41 139
MS.gene75497.t1 AT5G03520 39.535 172 95 3 48 218 40 203 1.78e-40 137
MS.gene75497.t1 AT5G64990 35.404 161 104 0 14 174 8 168 4.45e-37 129
MS.gene75497.t1 AT4G19640 38.365 159 97 1 15 173 12 169 1.53e-36 127
MS.gene75497.t1 AT4G19640 44.000 125 70 0 15 139 12 136 1.11e-35 123
MS.gene75497.t1 AT1G22740 39.394 165 93 3 13 170 8 172 4.52e-35 123
MS.gene75497.t1 AT2G21880 39.394 165 93 3 13 170 9 173 5.93e-35 123
MS.gene75497.t1 AT3G18820 39.394 165 93 3 13 170 8 172 1.74e-34 122
MS.gene75497.t1 AT4G09720 40.000 165 92 3 13 170 8 172 1.94e-34 122
MS.gene75497.t1 AT5G64990 33.929 168 104 1 14 174 8 175 2.38e-34 122
MS.gene75497.t1 AT1G52280 37.647 170 99 3 13 175 8 177 3.89e-34 121
MS.gene75497.t1 AT1G49300 38.323 167 96 3 13 172 8 174 1.44e-33 120
MS.gene75497.t1 AT1G49300 38.323 167 96 3 13 172 8 174 1.44e-33 120
MS.gene75497.t1 AT4G09720 38.824 170 92 3 13 170 8 177 1.70e-33 120
MS.gene75497.t1 AT5G46025 54.286 105 47 1 75 178 6 110 3.81e-33 115
MS.gene75497.t1 AT3G09910 37.430 179 109 3 1 177 1 178 1.76e-32 117
MS.gene75497.t1 AT3G09910 37.430 179 109 3 1 177 1 178 1.76e-32 117
MS.gene75497.t1 AT3G09910 37.430 179 109 3 1 177 1 178 1.76e-32 117
MS.gene75497.t1 AT4G09720 37.500 176 92 3 13 170 8 183 2.00e-32 117
MS.gene75497.t1 AT3G09910 39.053 169 100 3 1 167 1 168 5.42e-32 115
MS.gene75497.t1 AT3G09910 39.053 169 100 3 1 167 1 168 5.42e-32 115
MS.gene75497.t1 AT3G16100 36.970 165 97 3 13 170 8 172 1.14e-31 115
MS.gene75497.t1 AT5G39620 31.604 212 125 5 14 218 6 204 5.56e-30 110
MS.gene75497.t1 AT2G21880 38.514 148 84 3 30 170 1 148 1.59e-27 103
MS.gene75497.t1 AT2G21880 38.514 148 84 3 30 170 1 148 1.59e-27 103
MS.gene75497.t1 AT5G55080 31.548 168 111 3 8 174 7 171 1.30e-25 99.8
MS.gene75497.t1 AT4G09720 41.481 135 72 3 43 170 4 138 1.41e-25 98.2
MS.gene75497.t1 AT4G09720 41.481 135 72 3 43 170 4 138 1.41e-25 98.2
MS.gene75497.t1 AT4G09720 41.481 135 72 3 43 170 4 138 1.41e-25 98.2
MS.gene75497.t1 AT2G21880 34.545 165 93 4 13 170 9 165 3.21e-25 98.2
MS.gene75497.t1 AT2G44690 35.758 165 92 5 15 167 20 182 2.05e-24 96.3
MS.gene75497.t1 AT5G20020 29.126 206 129 5 8 210 7 198 2.71e-23 93.6
MS.gene75497.t1 AT5G55190 29.126 206 129 5 8 210 7 198 4.21e-23 93.2
MS.gene75497.t1 AT5G20010 30.435 184 111 5 8 188 7 176 9.56e-23 92.0
MS.gene75497.t1 AT3G48040 32.121 165 98 5 15 167 10 172 1.02e-19 84.0
MS.gene75497.t1 AT1G20090 32.727 165 97 6 15 167 7 169 3.70e-19 82.0
MS.gene75497.t1 AT5G45970 31.361 169 102 5 15 171 8 174 3.77e-19 82.4
MS.gene75497.t1 AT4G35020 32.168 143 87 4 15 156 8 141 4.15e-19 82.0
MS.gene75497.t1 AT4G35020 32.168 143 87 4 15 156 8 141 4.15e-19 82.0
MS.gene75497.t1 AT4G35020 32.168 143 87 4 15 156 8 141 4.15e-19 82.0
MS.gene75497.t1 AT1G75840 32.121 165 98 6 15 167 8 170 4.76e-19 82.0
MS.gene75497.t1 AT5G62880 30.233 172 106 5 15 174 10 179 6.52e-19 82.0
MS.gene75497.t1 AT3G48040 36.364 121 74 3 15 134 10 128 4.40e-18 79.0
MS.gene75497.t1 AT3G51300 30.909 165 100 6 15 167 8 170 5.57e-18 79.0
MS.gene75497.t1 AT4G28950 25.641 195 133 4 14 198 7 199 1.41e-17 78.2
MS.gene75497.t1 AT5G62880 34.711 121 76 3 15 134 10 128 1.67e-17 77.8
MS.gene75497.t1 AT2G17800 30.909 165 100 6 15 167 8 170 2.41e-17 77.4
MS.gene75497.t1 AT2G17800 30.909 165 100 6 15 167 8 170 2.41e-17 77.4
MS.gene75497.t1 AT4G08190 59.375 64 23 1 104 167 67 127 2.85e-17 75.5
MS.gene75497.t1 AT4G35950 30.909 165 100 6 15 167 8 170 3.00e-17 77.0
MS.gene75497.t1 AT4G35020 33.333 114 73 3 15 127 8 119 2.62e-16 73.2
MS.gene75497.t1 AT4G35020 33.333 114 73 3 15 127 8 119 2.62e-16 73.2
MS.gene75497.t1 AT3G22950 29.167 120 79 3 14 132 18 132 5.42e-11 59.7
MS.gene75497.t1 AT3G22950 29.167 120 79 3 14 132 18 132 5.42e-11 59.7

Find 46 sgRNAs with CRISPR-Local

Find 205 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGACAACACATGCTCTTCTT+AGG 0.168776 3.3:+72530015 None:intergenic
AATATAGTCATCATTCTTAT+AGG 0.279237 3.3:-72530297 MS.gene75497:CDS
CATACTACAGGGGCGCTGTT+GGG 0.366375 3.3:-72530407 MS.gene75497:CDS
CCTGGCTGCTGATAAGAATC+AGG 0.369292 3.3:-72530103 MS.gene75497:CDS
AGAAAGAAGAGAACCGTTCT+TGG 0.377427 3.3:+72532752 None:intergenic
GTGATCGAAGCTCGGACGTT+TGG 0.386754 3.3:+72530362 None:intergenic
GGCAAGAAGATTATTGTTCC+TGG 0.407195 3.3:-72530054 MS.gene75497:CDS
GACAACACATGCTCTTCTTA+GGG 0.416162 3.3:+72530016 None:intergenic
AGAGTGTTAAGGCTCAGATC+TGG 0.425788 3.3:-72532786 MS.gene75497:CDS
GGGCGCTGTTGGGGCAATGT+TGG 0.427779 3.3:-72530397 MS.gene75497:CDS
GTCTTCAAGGTGGTTCTAAT+CGG 0.432686 3.3:-72532928 MS.gene75497:CDS
TTCTTAGGGATTTCTTGTGC+AGG 0.438762 3.3:+72530030 None:intergenic
TGAGTTTCAAACTCGTACTT+TGG 0.440485 3.3:-72532821 MS.gene75497:CDS
AAAGAATTTGCTGAGAAAGA+AGG 0.441025 3.3:-72530225 MS.gene75497:CDS
GAAGATAGACTACGTCTTCA+AGG 0.447575 3.3:-72532941 MS.gene75497:CDS
GCATACTACAGGGGCGCTGT+TGG 0.449830 3.3:-72530408 MS.gene75497:CDS
TGAAGACGTAGTCTATCTTC+TGG 0.451825 3.3:+72532944 None:intergenic
CGCAGTTCTTCTAACCATCT+AGG 0.458553 3.3:+72530336 None:intergenic
CCTGATTCTTATCAGCAGCC+AGG 0.467947 3.3:+72530103 None:intergenic
AGGAACAATAATCTTCTTGC+CGG 0.480386 3.3:+72530056 None:intergenic
GCTGATAAGAATCAGGGAAA+TGG 0.485728 3.3:-72530096 MS.gene75497:CDS
TATTGAACATAAGAGTGTTA+AGG 0.489565 3.3:-72532797 MS.gene75497:CDS
CAGTTACAAGTGCATACTAC+AGG 0.490649 3.3:-72530419 MS.gene75497:CDS
GCTTCGATCACATACCTAGA+TGG 0.498381 3.3:-72530350 MS.gene75497:CDS
GGCAACTCAGCATCTCTGTC+CGG 0.499309 3.3:-72530075 MS.gene75497:CDS
GGGATTTCTTGTGCAGGACC+AGG 0.502312 3.3:+72530036 None:intergenic
ATACTACAGGGGCGCTGTTG+GGG 0.525539 3.3:-72530406 MS.gene75497:CDS
GCTCAGATCTGGGACACTGC+TGG 0.529753 3.3:-72532775 MS.gene75497:CDS
GAGTGTTAAGGCTCAGATCT+GGG 0.538288 3.3:-72532785 MS.gene75497:CDS
TTCTGTCAAAACAGTCATGA+AGG 0.542515 3.3:+72530152 None:intergenic
GTGGACTCAAAAGCTACAAT+CGG 0.568023 3.3:-72532847 MS.gene75497:CDS
CATTGTCAACAAGAAGAACC+TGG 0.569186 3.3:-72530121 MS.gene75497:CDS
CTAATCGGTGATTCTGCAGT+CGG 0.575717 3.3:-72532913 MS.gene75497:CDS
GGGACACTGCTGGCCAAGAA+CGG 0.580774 3.3:-72532765 MS.gene75497:intron
AGGAAACAAAAGTGATCTTG+AGG 0.580983 3.3:-72530277 MS.gene75497:CDS
CTAGGTATGTGATCGAAGCT+CGG 0.584273 3.3:+72530354 None:intergenic
AGTTACAAGTGCATACTACA+GGG 0.605565 3.3:-72530418 MS.gene75497:CDS
GAAAATCTCAGATACTAGCT+CGG 0.614980 3.3:-72532891 MS.gene75497:CDS
CTGGCTGCTGATAAGAATCA+GGG 0.627817 3.3:-72530102 MS.gene75497:CDS
TGACTATATTCTTGTCAGCA+TGG 0.639191 3.3:+72530310 None:intergenic
ATTAGTTGCTTGCAGCGCAG+AGG 0.640396 3.3:+72530185 None:intergenic
GCAAGCAACTAATGTTGAGA+CGG 0.646912 3.3:-72530175 MS.gene75497:CDS
TGCAAGAAACGACTTCAGCG+TGG 0.696247 3.3:-72532866 MS.gene75497:CDS
GTTACAAGTGCATACTACAG+GGG 0.696627 3.3:-72530417 MS.gene75497:CDS
GCAGCGTGCAGTACCCACAG+AGG 0.703658 3.3:-72530253 MS.gene75497:CDS
GATAGACTACGTCTTCAAGG+TGG 0.739113 3.3:-72532938 MS.gene75497:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTTTTTTAAATT+CGG + chr3.3:72530937-72530956 None:intergenic 0.0%
!!! AATTATATCAAATTTAAAAC+TGG + chr3.3:72531367-72531386 None:intergenic 10.0%
!! TGTACTTGTAATTTAAATAT+TGG + chr3.3:72532723-72532742 None:intergenic 15.0%
!!! ACTGTTGATAAATAAATATT+TGG + chr3.3:72531973-72531992 None:intergenic 15.0%
!!! GAAGAAAAACATAAATTTTA+TGG - chr3.3:72531613-72531632 MS.gene75497:intron 15.0%
!! AAAAAAATCTAGTATGTGAA+TGG - chr3.3:72530950-72530969 MS.gene75497:intron 20.0%
!! AATATAGTCATCATTCTTAT+AGG - chr3.3:72532926-72532945 MS.gene75497:CDS 20.0%
!!! ATGATTTTTATTTCAAAGAG+TGG + chr3.3:72532462-72532481 None:intergenic 20.0%
!!! ATTTTCAAAATCAGCAATTT+TGG - chr3.3:72532534-72532553 MS.gene75497:intron 20.0%
!!! GTTTATTTATCTGAAGTTAA+TGG - chr3.3:72530616-72530635 MS.gene75497:intron 20.0%
!!! GTTTTGTACTATTTTTTCTA+CGG - chr3.3:72532647-72532666 MS.gene75497:intron 20.0%
!!! GTTTTGTCTGATTTTATAAA+TGG - chr3.3:72532759-72532778 MS.gene75497:intron 20.0%
!!! TAATTGATTAGTTGAATTAG+CGG + chr3.3:72530180-72530199 None:intergenic 20.0%
! ATTGGTTGAGTAAAAAAACA+TGG + chr3.3:72532610-72532629 None:intergenic 25.0%
! GAACCAAATCATTTATTCAT+GGG + chr3.3:72531856-72531875 None:intergenic 25.0%
! TAAATTACAAGTACATCGAA+TGG - chr3.3:72532728-72532747 MS.gene75497:intron 25.0%
! TAATAGTTGTAAAGAGAAGA+AGG - chr3.3:72531674-72531693 MS.gene75497:intron 25.0%
! TATGTGAATTAACCCATTTA+GGG - chr3.3:72530886-72530905 MS.gene75497:intron 25.0%
! TGATTATTTATAGAGCAGTT+AGG - chr3.3:72531547-72531566 MS.gene75497:intron 25.0%
! TTGGTTGAGTAAAAAAACAT+GGG + chr3.3:72532609-72532628 None:intergenic 25.0%
!! AACCTTTTGTACATATTAAC+AGG + chr3.3:72532397-72532416 None:intergenic 25.0%
!! AATTGATTAGTTGAATTAGC+GGG + chr3.3:72530179-72530198 None:intergenic 25.0%
!! TATCAATAACACGTTTTCAA+AGG + chr3.3:72532511-72532530 None:intergenic 25.0%
!! TCAAATTTAAAACTGGAATG+TGG + chr3.3:72531360-72531379 None:intergenic 25.0%
!! TGATTTTACCATAAGTTCAA+AGG + chr3.3:72531199-72531218 None:intergenic 25.0%
!!! ACCATATTTTGATTTGAAAC+CGG + chr3.3:72531223-72531242 None:intergenic 25.0%
!!! ATGTATTGACTGATTTCAAT+TGG - chr3.3:72531298-72531317 MS.gene75497:intron 25.0%
!!! TATTGAACATAAGAGTGTTA+AGG - chr3.3:72530426-72530445 MS.gene75497:CDS 25.0%
!!! TTGTTTATTGTTTTTGCCAA+TGG - chr3.3:72530765-72530784 MS.gene75497:intron 25.0%
!!! TTTGAATTTGGTTTGAAAAG+TGG + chr3.3:72530156-72530175 None:intergenic 25.0%
AAATACTTGTAGGGAGAAAT+GGG + chr3.3:72532256-72532275 None:intergenic 30.0%
AACTAATCTATTGTTTCCTC+CGG - chr3.3:72530045-72530064 MS.gene75497:CDS 30.0%
ACCACTATTAGCATACTATA+TGG + chr3.3:72531138-72531157 None:intergenic 30.0%
AGATTTATGAAACTTACGAG+GGG - chr3.3:72530991-72531010 MS.gene75497:intron 30.0%
AGCCTGTTAATATGTACAAA+AGG - chr3.3:72532392-72532411 MS.gene75497:intron 30.0%
ATACTTCTGATCATTTCATC+AGG - chr3.3:72532694-72532713 MS.gene75497:intron 30.0%
CAATGATTCCTTTGAACTTA+TGG - chr3.3:72531188-72531207 MS.gene75497:intron 30.0%
CAGATTTATGAAACTTACGA+GGG - chr3.3:72530990-72531009 MS.gene75497:intron 30.0%
CAGTAAAGTGAGAAAATCAA+TGG - chr3.3:72531892-72531911 MS.gene75497:intron 30.0%
GAAATCAAAAGCAAGAACAA+TGG - chr3.3:72530231-72530250 MS.gene75497:CDS 30.0%
GAACTTATGGTAAAATCATC+CGG - chr3.3:72531201-72531220 MS.gene75497:intron 30.0%
GGAACCAAATCATTTATTCA+TGG + chr3.3:72531857-72531876 None:intergenic 30.0%
GTATGTGAATTAACCCATTT+AGG - chr3.3:72530885-72530904 MS.gene75497:intron 30.0%
GTCAAAAAGTGATTTATGAC+AGG + chr3.3:72530121-72530140 None:intergenic 30.0%
GTGTCAAACAAATTCAAGAT+TGG + chr3.3:72530669-72530688 None:intergenic 30.0%
GTTATATAAGTCCACAGATT+TGG + chr3.3:72531324-72531343 None:intergenic 30.0%
TACTTCTGATCATTTCATCA+GGG - chr3.3:72532695-72532714 MS.gene75497:intron 30.0%
TCCATATAGTATGCTAATAG+TGG - chr3.3:72531134-72531153 MS.gene75497:intron 30.0%
TCCGGTTTCAAATCAAAATA+TGG - chr3.3:72531219-72531238 MS.gene75497:intron 30.0%
TGTTCATATACATAGTGTGT+TGG + chr3.3:72531408-72531427 None:intergenic 30.0%
TTTCAACTTTCAACCTTCTT+GGG - chr3.3:72530068-72530087 MS.gene75497:CDS 30.0%
! ACTTTACTGATTACTCACTT+TGG + chr3.3:72531881-72531900 None:intergenic 30.0%
! AGCAAGTATCTGTTACTTAA+GGG + chr3.3:72532215-72532234 None:intergenic 30.0%
! TATGTTGCTTAAACAAAGCT+GGG - chr3.3:72531708-72531727 MS.gene75497:intron 30.0%
! TTTTTGCCAATGGTTTCTTT+GGG - chr3.3:72530775-72530794 MS.gene75497:intron 30.0%
!! AAAGAATTTGCTGAGAAAGA+AGG - chr3.3:72532998-72533017 MS.gene75497:intron 30.0%
!! GCTGATTATTTTTCTGTCTT+GGG - chr3.3:72532556-72532575 MS.gene75497:intron 30.0%
!! TTGGTTTTCGATTTTGAATG+TGG + chr3.3:72530211-72530230 None:intergenic 30.0%
!!! TGTTCTTGCTTTTGATTTCT+TGG + chr3.3:72530230-72530249 None:intergenic 30.0%
AAGTGATTTATGACAGGTTG+CGG + chr3.3:72530115-72530134 None:intergenic 35.0%
AGAAGGTTGAAAGTTGAAAC+CGG + chr3.3:72530067-72530086 None:intergenic 35.0%
AGGAAACAAAAGTGATCTTG+AGG - chr3.3:72532946-72532965 MS.gene75497:CDS 35.0%
AGGAACAATAATCTTCTTGC+CGG + chr3.3:72533170-72533189 None:intergenic 35.0%
AGTTACAAGTGCATACTACA+GGG - chr3.3:72532805-72532824 MS.gene75497:CDS 35.0%
ATTCTGTGATACTAGCATAC+TGG + chr3.3:72532352-72532371 None:intergenic 35.0%
ATTTACTTGAATGACACGTG+TGG - chr3.3:72531494-72531513 MS.gene75497:intron 35.0%
ATTTCAATTGGCCAAATCTG+TGG - chr3.3:72531310-72531329 MS.gene75497:intron 35.0%
ATTTGGAAGTTGGGAGAAAA+TGG - chr3.3:72531590-72531609 MS.gene75497:intron 35.0%
CAGCCCATGAATAAATGATT+TGG - chr3.3:72531850-72531869 MS.gene75497:intron 35.0%
CAGTTTGCATGCTCTTTAAT+CGG - chr3.3:72531062-72531081 MS.gene75497:intron 35.0%
CCAGAAAGGAAATACTTGTA+GGG + chr3.3:72532265-72532284 None:intergenic 35.0%
CGCAGGATTTAAGTAAGAAA+AGG - chr3.3:72530833-72530852 MS.gene75497:intron 35.0%
CTCTAATTTATTGCTGGATC+AGG + chr3.3:72532045-72532064 None:intergenic 35.0%
GAAAATCTCAGATACTAGCT+CGG - chr3.3:72530332-72530351 MS.gene75497:CDS 35.0%
GAAATACTTGTAGGGAGAAA+TGG + chr3.3:72532257-72532276 None:intergenic 35.0%
GCAAGACTCTAATTTATTGC+TGG + chr3.3:72532051-72532070 None:intergenic 35.0%
GCACATGCATGATAAATCAT+GGG + chr3.3:72531933-72531952 None:intergenic 35.0%
GCAGATTTATGAAACTTACG+AGG - chr3.3:72530989-72531008 MS.gene75497:intron 35.0%
GTTCAAAGGAATCATTGCTA+AGG + chr3.3:72531185-72531204 None:intergenic 35.0%
GTTTCAACTTTCAACCTTCT+TGG - chr3.3:72530067-72530086 MS.gene75497:CDS 35.0%
TAGGAGTTACTGAGATTTCA+GGG - chr3.3:72531796-72531815 MS.gene75497:intron 35.0%
TCAACCAATGTTCTTCAATC+TGG - chr3.3:72532621-72532640 MS.gene75497:intron 35.0%
TGACTATATTCTTGTCAGCA+TGG + chr3.3:72532916-72532935 None:intergenic 35.0%
TGAGTTTCAAACTCGTACTT+TGG - chr3.3:72530402-72530421 MS.gene75497:CDS 35.0%
TGCACATGCATGATAAATCA+TGG + chr3.3:72531934-72531953 None:intergenic 35.0%
TTACTTAAGGGAGTTAGAGT+TGG + chr3.3:72532203-72532222 None:intergenic 35.0%
TTCTGTCAAAACAGTCATGA+AGG + chr3.3:72533074-72533093 None:intergenic 35.0%
TTTGGAAGTTGGGAGAAAAT+GGG - chr3.3:72531591-72531610 MS.gene75497:intron 35.0%
! AAATTCTTTTGCATCCTCTG+TGG + chr3.3:72532987-72533006 None:intergenic 35.0%
! AATTCTTTTGCATCCTCTGT+GGG + chr3.3:72532986-72533005 None:intergenic 35.0%
! ACATTGATGGGAAATGGATT+TGG - chr3.3:72531573-72531592 MS.gene75497:intron 35.0%
! GAGCAAGTATCTGTTACTTA+AGG + chr3.3:72532216-72532235 None:intergenic 35.0%
! GTATGTTGCTTAAACAAAGC+TGG - chr3.3:72531707-72531726 MS.gene75497:intron 35.0%
! GTTTTTGCCAATGGTTTCTT+TGG - chr3.3:72530774-72530793 MS.gene75497:intron 35.0%
! TCGATTTTGAATGTGGAGTT+GGG + chr3.3:72530204-72530223 None:intergenic 35.0%
! TGAATTAACCCATTTAGGGT+TGG - chr3.3:72530890-72530909 MS.gene75497:intron 35.0%
! TTACTGATTACTCACTTTGG+AGG + chr3.3:72531878-72531897 None:intergenic 35.0%
! TTCGATTTTGAATGTGGAGT+TGG + chr3.3:72530205-72530224 None:intergenic 35.0%
!! ATTTGGTTTGAAAAGTGGAG+TGG + chr3.3:72530151-72530170 None:intergenic 35.0%
!! GGCTGATTATTTTTCTGTCT+TGG - chr3.3:72532555-72532574 MS.gene75497:intron 35.0%
!! TGAATTAGCGGGTTTGAATT+TGG + chr3.3:72530168-72530187 None:intergenic 35.0%
!! TGTTGGTAGCATTTCTAACA+TGG + chr3.3:72531391-72531410 None:intergenic 35.0%
ACTCATCCCAAAGAAACCAT+TGG + chr3.3:72530784-72530803 None:intergenic 40.0%
AGAAAGAAGAGAACCGTTCT+TGG + chr3.3:72530474-72530493 None:intergenic 40.0%
AGCAGTTAGGAAGACATTGA+TGG - chr3.3:72531560-72531579 MS.gene75497:intron 40.0%
AGGAAGACATTGATGGGAAA+TGG - chr3.3:72531567-72531586 MS.gene75497:intron 40.0%
AGGTAGGTTATAAGGATGTG+TGG + chr3.3:72532124-72532143 None:intergenic 40.0%
AGTGATTTATGACAGGTTGC+GGG + chr3.3:72530114-72530133 None:intergenic 40.0%
ATGTGTGGAGAGAACAATAG+GGG + chr3.3:72532109-72532128 None:intergenic 40.0%
ATTGGCAGAGGTAGGTTATA+AGG + chr3.3:72532132-72532151 None:intergenic 40.0%
CAATAGGGGATTCAGTTTAG+CGG + chr3.3:72532095-72532114 None:intergenic 40.0%
CAGTTACAAGTGCATACTAC+AGG - chr3.3:72532804-72532823 MS.gene75497:CDS 40.0%
CATGCATGATAAATCATGGG+TGG + chr3.3:72531930-72531949 None:intergenic 40.0%
CATTGTCAACAAGAAGAACC+TGG - chr3.3:72533102-72533121 MS.gene75497:intron 40.0%
CCCTACAAGTATTTCCTTTC+TGG - chr3.3:72532262-72532281 MS.gene75497:intron 40.0%
CTAGGAGTTACTGAGATTTC+AGG - chr3.3:72531795-72531814 MS.gene75497:intron 40.0%
CTCACCAGATTGAAGAACAT+TGG + chr3.3:72532628-72532647 None:intergenic 40.0%
GAAGATAGACTACGTCTTCA+AGG - chr3.3:72530282-72530301 MS.gene75497:CDS 40.0%
GACAACACATGCTCTTCTTA+GGG + chr3.3:72533210-72533229 None:intergenic 40.0%
GATGTGTGGAGAGAACAATA+GGG + chr3.3:72532110-72532129 None:intergenic 40.0%
GCAAGCAACTAATGTTGAGA+CGG - chr3.3:72533048-72533067 MS.gene75497:intron 40.0%
GCAGTTAGGAAGACATTGAT+GGG - chr3.3:72531561-72531580 MS.gene75497:intron 40.0%
GCCAGAAAGGAAATACTTGT+AGG + chr3.3:72532266-72532285 None:intergenic 40.0%
GCTGATAAGAATCAGGGAAA+TGG - chr3.3:72533127-72533146 MS.gene75497:intron 40.0%
GGCAAGAAGATTATTGTTCC+TGG - chr3.3:72533169-72533188 MS.gene75497:intron 40.0%
GGGTCAGAAAGTAAGAAGAA+CGG - chr3.3:72531728-72531747 MS.gene75497:intron 40.0%
GGTCAGAAAGTAAGAAGAAC+GGG - chr3.3:72531729-72531748 MS.gene75497:intron 40.0%
GTAGTTGTGTTTAGAGGGAA+AGG + chr3.3:72532073-72532092 None:intergenic 40.0%
GTATGCATTCGACATGAATG+AGG + chr3.3:72531256-72531275 None:intergenic 40.0%
GTGGACTCAAAAGCTACAAT+CGG - chr3.3:72530376-72530395 MS.gene75497:CDS 40.0%
GTTACAAGTGCATACTACAG+GGG - chr3.3:72532806-72532825 MS.gene75497:CDS 40.0%
GTTGGATTTCATACGTCACA+AGG - chr3.3:72531516-72531535 MS.gene75497:intron 40.0%
TAGCGGTAGTTGTGTTTAGA+GGG + chr3.3:72532078-72532097 None:intergenic 40.0%
TCGGCATATTTGAACTTCAG+TGG - chr3.3:72531081-72531100 MS.gene75497:intron 40.0%
TGAAGACGTAGTCTATCTTC+TGG + chr3.3:72530282-72530301 None:intergenic 40.0%
TGACAACACATGCTCTTCTT+AGG + chr3.3:72533211-72533230 None:intergenic 40.0%
TTAGCGGTAGTTGTGTTTAG+AGG + chr3.3:72532079-72532098 None:intergenic 40.0%
TTCTTAGGGATTTCTTGTGC+AGG + chr3.3:72533196-72533215 None:intergenic 40.0%
! GGGAAATGGATTTGGAAGTT+GGG - chr3.3:72531581-72531600 MS.gene75497:intron 40.0%
! TGGGAAATGGATTTGGAAGT+TGG - chr3.3:72531580-72531599 MS.gene75497:intron 40.0%
!! GTCTTCAAGGTGGTTCTAAT+CGG - chr3.3:72530295-72530314 MS.gene75497:CDS 40.0%
AACCCAAGCCAACCCTAAAT+GGG + chr3.3:72530901-72530920 None:intergenic 45.0%
ACTTGAATGACACGTGTGGT+TGG - chr3.3:72531498-72531517 MS.gene75497:intron 45.0%
AGATAGCACTCTCACAGGAT+TGG + chr3.3:72532150-72532169 None:intergenic 45.0%
AGGTTGAAAGTTGAAACCGG+AGG + chr3.3:72530064-72530083 None:intergenic 45.0%
AGTTTGAGTGTGTATGAGCG+AGG - chr3.3:72530801-72530820 MS.gene75497:intron 45.0%
CAGTGAGTTGCTCACAATAG+AGG - chr3.3:72532017-72532036 MS.gene75497:intron 45.0%
CATACTGCCTGACTTAACTC+AGG - chr3.3:72531271-72531290 MS.gene75497:intron 45.0%
CATGTCACCTGAGTTAAGTC+AGG + chr3.3:72531281-72531300 None:intergenic 45.0%
CGCAGTTCTTCTAACCATCT+AGG + chr3.3:72532890-72532909 None:intergenic 45.0%
CTAATCGGTGATTCTGCAGT+CGG - chr3.3:72530310-72530329 MS.gene75497:CDS 45.0%
CTAGGTATGTGATCGAAGCT+CGG + chr3.3:72532872-72532891 None:intergenic 45.0%
CTCAGTAACTCCTAGCTGTT+GGG + chr3.3:72531790-72531809 None:intergenic 45.0%
CTGGCTGCTGATAAGAATCA+GGG - chr3.3:72533121-72533140 MS.gene75497:intron 45.0%
GAGTGTTAAGGCTCAGATCT+GGG - chr3.3:72530438-72530457 MS.gene75497:intron 45.0%
GATAGACTACGTCTTCAAGG+TGG - chr3.3:72530285-72530304 MS.gene75497:CDS 45.0%
GCTGCATGAGTTGTACACTA+AGG + chr3.3:72532375-72532394 None:intergenic 45.0%
GCTGTGTGCTTACAGACATT+GGG - chr3.3:72532284-72532303 MS.gene75497:intron 45.0%
GCTTCGATCACATACCTAGA+TGG - chr3.3:72532873-72532892 MS.gene75497:CDS 45.0%
GGATGTGTGGAGAGAACAAT+AGG + chr3.3:72532111-72532130 None:intergenic 45.0%
GTAACAGATACTTGCTCAGC+TGG - chr3.3:72532219-72532238 MS.gene75497:intron 45.0%
TCTCAGTAACTCCTAGCTGT+TGG + chr3.3:72531791-72531810 None:intergenic 45.0%
TGTGAGCAACTCACTGTAGA+GGG + chr3.3:72532013-72532032 None:intergenic 45.0%
TTGTGAGCAACTCACTGTAG+AGG + chr3.3:72532014-72532033 None:intergenic 45.0%
! AGAGTGTTAAGGCTCAGATC+TGG - chr3.3:72530437-72530456 MS.gene75497:intron 45.0%
!! AACCCATTTAGGGTTGGCTT+GGG - chr3.3:72530896-72530915 MS.gene75497:intron 45.0%
!! AATCCTGTGAGAGTGCTATC+TGG - chr3.3:72532149-72532168 MS.gene75497:intron 45.0%
!! GTTTGACTGATGTTGACTCG+AGG - chr3.3:72530701-72530720 MS.gene75497:intron 45.0%
!! TAACCCATTTAGGGTTGGCT+TGG - chr3.3:72530895-72530914 MS.gene75497:intron 45.0%
!!! TTTTTTTTTTTTTTTTAACT+CGG + chr3.3:72530020-72530039 None:intergenic 5.0%
ACAATGGCGAGTGCAGGTTA+CGG - chr3.3:72530247-72530266 MS.gene75497:CDS 50.0%
AGACCAGATAGCACTCTCAC+AGG + chr3.3:72532155-72532174 None:intergenic 50.0%
AGCGATACAGACTGCAGAGT+AGG + chr3.3:72531647-72531666 None:intergenic 50.0%
AGTAACTCCTAGCTGTTGGG+AGG + chr3.3:72531787-72531806 None:intergenic 50.0%
ATTAGTTGCTTGCAGCGCAG+AGG + chr3.3:72533041-72533060 None:intergenic 50.0%
CATAACTCCTCCCAACAGCT+AGG - chr3.3:72531777-72531796 MS.gene75497:intron 50.0%
CCTGATTCTTATCAGCAGCC+AGG + chr3.3:72533123-72533142 None:intergenic 50.0%
CCTGGCTGCTGATAAGAATC+AGG - chr3.3:72533120-72533139 MS.gene75497:intron 50.0%
CTGTAAGCACACAGCCAGAA+AGG + chr3.3:72532279-72532298 None:intergenic 50.0%
GAACCCAAGCCAACCCTAAA+TGG + chr3.3:72530902-72530921 None:intergenic 50.0%
GACAGGTTGCGGGTGATTAT+TGG + chr3.3:72530104-72530123 None:intergenic 50.0%
GGCTGTGTGCTTACAGACAT+TGG - chr3.3:72532283-72532302 MS.gene75497:intron 50.0%
GGGAGAAATGGGTGAGTGTT+TGG + chr3.3:72532245-72532264 None:intergenic 50.0%
GGTTGCGGGTGATTATTGGT+TGG + chr3.3:72530100-72530119 None:intergenic 50.0%
TGCAAGAAACGACTTCAGCG+TGG - chr3.3:72530357-72530376 MS.gene75497:CDS 50.0%
! CGGGTGATTATTGGTTGGTG+GGG + chr3.3:72530095-72530114 None:intergenic 50.0%
! GCGGGTGATTATTGGTTGGT+GGG + chr3.3:72530096-72530115 None:intergenic 50.0%
! TGCGGGTGATTATTGGTTGG+TGG + chr3.3:72530097-72530116 None:intergenic 50.0%
!! GACTGATGTTGACTCGAGGT+TGG - chr3.3:72530705-72530724 MS.gene75497:intron 50.0%
!! TTAGGGTTGGCTTGGGTTCT+TGG - chr3.3:72530903-72530922 MS.gene75497:intron 50.0%
GCAAGAACAATGGCGAGTGC+AGG - chr3.3:72530241-72530260 MS.gene75497:CDS 55.0%
GGCAACTCAGCATCTCTGTC+CGG - chr3.3:72533148-72533167 MS.gene75497:intron 55.0%
GGGATTTCTTGTGCAGGACC+AGG + chr3.3:72533190-72533209 None:intergenic 55.0%
GTGATCGAAGCTCGGACGTT+TGG + chr3.3:72532864-72532883 None:intergenic 55.0%
! CACTCTCACAGGATTGGCAG+AGG + chr3.3:72532144-72532163 None:intergenic 55.0%
! CTCACAGGATTGGCAGAGGT+AGG + chr3.3:72532140-72532159 None:intergenic 55.0%
!! ATACTACAGGGGCGCTGTTG+GGG - chr3.3:72532817-72532836 MS.gene75497:CDS 55.0%
!! CATACTACAGGGGCGCTGTT+GGG - chr3.3:72532816-72532835 MS.gene75497:CDS 55.0%
GAGCGAGGTGTGATTGACGC+AGG - chr3.3:72530816-72530835 MS.gene75497:intron 60.0%
GGGACACTGCTGGCCAAGAA+CGG - chr3.3:72530458-72530477 MS.gene75497:intron 60.0%
! GCTCAGATCTGGGACACTGC+TGG - chr3.3:72530448-72530467 MS.gene75497:intron 60.0%
!! GCATACTACAGGGGCGCTGT+TGG - chr3.3:72532815-72532834 MS.gene75497:CDS 60.0%
!! TGGTTGGTGGGGTCCCAAGA+AGG + chr3.3:72530084-72530103 None:intergenic 60.0%
GCAGCGTGCAGTACCCACAG+AGG - chr3.3:72532970-72532989 MS.gene75497:intron 65.0%
! GGGCGCTGTTGGGGCAATGT+TGG - chr3.3:72532826-72532845 MS.gene75497:CDS 65.0%


Chromosome Type Strat End Strand Name
chr3.3 gene 72530011 72533234 72530011 ID=MS.gene75497
chr3.3 mRNA 72530011 72533234 72530011 ID=MS.gene75497.t1;Parent=MS.gene75497
chr3.3 exon 72533231 72533234 72533231 ID=MS.gene75497.t1.exon1;Parent=MS.gene75497.t1
chr3.3 CDS 72533231 72533234 72533231 ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1
chr3.3 exon 72532766 72532982 72532766 ID=MS.gene75497.t1.exon2;Parent=MS.gene75497.t1
chr3.3 CDS 72532766 72532982 72532766 ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1
chr3.3 exon 72530011 72530449 72530011 ID=MS.gene75497.t1.exon3;Parent=MS.gene75497.t1
chr3.3 CDS 72530011 72530449 72530011 ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1
Gene Sequence

>MS.gene75497

ATGGGTCCGAGTTAAAAAAAAAAAAAAAAAAAAAAACTAATCTATTGTTTCCTCCGGTTTCAACTTTCAACCTTCTTGGGACCCCACCAACCAATAATCACCCGCAACCTGTCATAAATCACTTTTTGACATTAACACCACTCCACTTTTCAAACCAAATTCAAACCCGCTAATTCAACTAATCAATTAACCCAACTCCACATTCAAAATCGAAAACCAAGAAATCAAAAGCAAGAACAATGGCGAGTGCAGGTTACGGTGATGCAAACCAGAAGATAGACTACGTCTTCAAGGTGGTTCTAATCGGTGATTCTGCAGTCGGAAAATCTCAGATACTAGCTCGGTTTGCAAGAAACGACTTCAGCGTGGACTCAAAAGCTACAATCGGTGTTGAGTTTCAAACTCGTACTTTGGTTATTGAACATAAGAGTGTTAAGGCTCAGATCTGGGACACTGCTGGCCAAGAACGGTTCTCTTCTTTCTCTGCACTTTTTTGTTTTGCTATGCTTTTTTCTAGATCTTATTTTTTTTTCTTTGATTTTGATTTTAGATTTACTTATATTGAGTTCAATGTTGTAGAGATCTAGTTTCATGTTAGTTGTGAAGTTTATTTATCTGAAGTTAATGGTCAAATTAAGTTCAATTTTACTTTTGACCAATCTTGAATTTGTTTGACACATACTTGAATTAGTTTGACTGATGTTGACTCGAGGTTGGAGCTCAATTTTAAACGTCATTGCTGTAACTGATCTTCTTGTTTATTGTTTTTGCCAATGGTTTCTTTGGGATGAGTTTGAGTGTGTATGAGCGAGGTGTGATTGACGCAGGATTTAAGTAAGAAAAGGAATAAGAGACTAGTACTCAAATTAATCTAGTATGTGAATTAACCCATTTAGGGTTGGCTTGGGTTCTTGGATTAGATACCGAATTTAAAAAAAAAAAAAAATCTAGTATGTGAATGGAATTGAAATCTAGTTAGCAGATTTATGAAACTTACGAGGGGATAAAGAATAGTCTATATAAATGAAATTGATCACAAGTAGAAATATTACAGTTTGCATGCTCTTTAATCGGCATATTTGAACTTCAGTGGTGTCTAAGTAATCTTTTTGCACTTTCATAGTCCATATAGTATGCTAATAGTGGTTTGATAACAATAACTTAACAGAAACCTTAGCAATGATTCCTTTGAACTTATGGTAAAATCATCCGGTTTCAAATCAAAATATGGTTTACTCTTGTCCTCATTCATGTCGAATGCATACTGCCTGACTTAACTCAGGTGACATGTATTGACTGATTTCAATTGGCCAAATCTGTGGACTTATATAACGAGAGATGCTGTGCCACATTCCAGTTTTAAATTTGATATAATTGCCATGTTAGAAATGCTACCAACACACTATGTATATGAACAATCATCGAAAATGTGTTATTGCTAGAATTTCTCTTGCAATATGTGTACTGCAACTTTATGTTTTGCATTTACTTGAATGACACGTGTGGTTGGATTTCATACGTCACAAGGATTAAAACTGATTATTTATAGAGCAGTTAGGAAGACATTGATGGGAAATGGATTTGGAAGTTGGGAGAAAATGGGAAGAAAAACATAAATTTTATGGAGAGTGATCCTACTCTGCAGTCTGTATCGCTGAATTGATAATAGTTGTAAAGAGAAGAAGGAATCTAAAATGTATGTTGCTTAAACAAAGCTGGGTCAGAAAGTAAGAAGAACGGGAAGAGAAAGCAATGTGTTTGTTTAGCATAACTCCTCCCAACAGCTAGGAGTTACTGAGATTTCAGGGTCATGAGTGTGTAAAATGAGTGTTTCTTTCGCAGCCCATGAATAAATGATTTGGTTCCTCCAAAGTGAGTAATCAGTAAAGTGAGAAAATCAATGGTTGATATTTTAACCACCCATGATTTATCATGCATGTGCATATATTATAATATCGACCAAATATTTATTTATCAACAGTTGATATTACTCATTTTACCCTCTACAGTGAGTTGCTCACAATAGAGGATCCTGATCCAGCAATAAATTAGAGTCTTGCCTTTCCCTCTAAACACAACTACCGCTAAACTGAATCCCCTATTGTTCTCTCCACACATCCTTATAACCTACCTCTGCCAATCCTGTGAGAGTGCTATCTGGTCTGCTACTAACTAGTTGCAACTGTTAACCAACTCTAACTCCCTTAAGTAACAGATACTTGCTCAGCTGGCCAAACACTCACCCATTTCTCCCTACAAGTATTTCCTTTCTGGCTGTGTGCTTACAGACATTGGGAACACATTTTTTTCTCAATTATTACTTAGATATCATCATTGTCCAGTATGCTAGTATCACAGAATCCTTAGTGTACAACTCATGCAGCCTGTTAATATGTACAAAAGGTTCACACTTGTGTGTATACTGCAGCACATTTAATTTGAAAATTACCACTCTTTGAAATAAAAATCATCACTCTCTATATCAATTCAGTTCAATCCTTTGAAAACGTGTTATTGATAAGTATTTTCAAAATCAGCAATTTTGGCTGATTATTTTTCTGTCTTGGGAAAGTTGATTTAGTCTTAAAGTCATTGCCCATGTTTTTTTACTCAACCAATGTTCTTCAATCTGGTGAGTTTTGTACTATTTTTTCTACGGTTTATTCGTAACTTTATATCAAGTATACTTCTGATCATTTCATCAGGGCACCAATATTTAAATTACAAGTACATCGAATGGTGATTGCAGTTTTGTCTGATTTTATAAATGGTTCATTCTCTACAGATATAGAGCAGTTACAAGTGCATACTACAGGGGCGCTGTTGGGGCAATGTTGGTTTATGACATTACCAAACGTCCGAGCTTCGATCACATACCTAGATGGTTAGAAGAACTGCGCAACCATGCTGACAAGAATATAGTCATCATTCTTATAGGAAACAAAAGTGATCTTGAGGAGCAGCGTGCAGTACCCACAGAGGATGCAAAAGAATTTGCTGAGAAAGAAGGCTTATTTTTCTTAGAGACCTCTGCGCTGCAAGCAACTAATGTTGAGACGGCCTTCATGACTGTTTTGACAGAAATATTTAACATTGTCAACAAGAAGAACCTGGCTGCTGATAAGAATCAGGGAAATGGCAACTCAGCATCTCTGTCCGGCAAGAAGATTATTGTTCCTGGTCCTGCACAAGAAATCCCTAAGAAGAGCATGTGTTGTCAGTAA

Protein sequence

>MS.gene75497.t1

MGYGDANQKIDYVFKVVLIGDSAVGKSQILARFARNDFSVDSKATIGVEFQTRTLVIEHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRPSFDHIPRWLEELRNHADKNIVIILIGNKSDLEEQRAVPTEDAKEFAEKEGLFFLETSALQATNVETAFMTVLTEIFNIVNKKNLAADKNQGNGNSASLSGKKIIVPGPAQEIPKKSMCCQ