Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75497.t1 | XP_003601931.1 | 99.1 | 218 | 2 | 0 | 2 | 219 | 5 | 222 | 4.70E-116 | 427.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75497.t1 | Q40191 | 89.0 | 219 | 23 | 1 | 2 | 219 | 6 | 224 | 7.6e-107 | 387.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75497.t1 | G7J3P7 | 99.1 | 218 | 2 | 0 | 2 | 219 | 5 | 222 | 3.4e-116 | 427.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051885 | MS.gene75497 | 0.823002 | 1.75E-53 | -1.69E-46 |
MS.gene061007 | MS.gene75497 | 0.809397 | 1.93E-50 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75497.t1 | MTR_3g086980 | 99.083 | 218 | 2 | 0 | 2 | 219 | 5 | 222 | 1.04e-163 | 450 |
MS.gene75497.t1 | MTR_8g089985 | 89.954 | 219 | 21 | 1 | 2 | 219 | 6 | 224 | 6.92e-150 | 416 |
MS.gene75497.t1 | MTR_1g052475 | 72.936 | 218 | 57 | 2 | 3 | 218 | 5 | 222 | 1.48e-115 | 329 |
MS.gene75497.t1 | MTR_0262s0050 | 72.558 | 215 | 59 | 0 | 3 | 217 | 5 | 219 | 1.01e-114 | 327 |
MS.gene75497.t1 | MTR_8g027220 | 65.438 | 217 | 67 | 2 | 5 | 217 | 18 | 230 | 6.77e-97 | 282 |
MS.gene75497.t1 | MTR_4g064897 | 62.736 | 212 | 75 | 1 | 7 | 218 | 6 | 213 | 1.26e-94 | 275 |
MS.gene75497.t1 | MTR_2g005510 | 60.664 | 211 | 81 | 1 | 8 | 218 | 10 | 218 | 3.20e-92 | 270 |
MS.gene75497.t1 | MTR_3g069510 | 61.468 | 218 | 79 | 3 | 1 | 217 | 1 | 214 | 2.29e-91 | 267 |
MS.gene75497.t1 | MTR_8g036220 | 56.561 | 221 | 90 | 3 | 4 | 218 | 6 | 226 | 6.07e-90 | 264 |
MS.gene75497.t1 | MTR_2g075950 | 58.879 | 214 | 85 | 3 | 6 | 219 | 6 | 216 | 2.66e-89 | 262 |
MS.gene75497.t1 | MTR_2g083860 | 65.000 | 180 | 63 | 0 | 6 | 185 | 6 | 185 | 1.19e-87 | 258 |
MS.gene75497.t1 | MTR_2g014990 | 57.273 | 220 | 87 | 3 | 1 | 218 | 1 | 215 | 1.59e-87 | 258 |
MS.gene75497.t1 | MTR_4g088090 | 55.455 | 220 | 91 | 2 | 1 | 218 | 1 | 215 | 6.81e-87 | 256 |
MS.gene75497.t1 | MTR_4g079350 | 55.455 | 220 | 91 | 2 | 1 | 218 | 1 | 215 | 3.51e-86 | 254 |
MS.gene75497.t1 | MTR_2g090865 | 55.814 | 215 | 91 | 1 | 4 | 218 | 2 | 212 | 7.06e-86 | 253 |
MS.gene75497.t1 | MTR_1g078200 | 55.405 | 222 | 95 | 2 | 1 | 218 | 1 | 222 | 6.11e-85 | 251 |
MS.gene75497.t1 | MTR_7g405790 | 55.924 | 211 | 84 | 2 | 12 | 218 | 14 | 219 | 1.07e-82 | 245 |
MS.gene75497.t1 | MTR_7g051940 | 56.250 | 208 | 85 | 2 | 12 | 218 | 12 | 214 | 1.67e-79 | 237 |
MS.gene75497.t1 | MTR_7g117910 | 59.024 | 205 | 65 | 3 | 8 | 211 | 15 | 201 | 5.68e-79 | 236 |
MS.gene75497.t1 | MTR_6g079550 | 51.415 | 212 | 100 | 1 | 7 | 218 | 6 | 214 | 3.07e-74 | 224 |
MS.gene75497.t1 | MTR_8g107070 | 52.381 | 210 | 99 | 1 | 7 | 216 | 8 | 216 | 1.62e-71 | 219 |
MS.gene75497.t1 | MTR_2g027660 | 46.193 | 197 | 101 | 2 | 12 | 208 | 5 | 196 | 2.80e-60 | 188 |
MS.gene75497.t1 | MTR_6g021790 | 51.515 | 165 | 80 | 0 | 11 | 175 | 4 | 168 | 1.10e-59 | 187 |
MS.gene75497.t1 | MTR_8g031870 | 53.503 | 157 | 73 | 0 | 12 | 168 | 5 | 161 | 1.18e-58 | 183 |
MS.gene75497.t1 | MTR_8g031660 | 50.610 | 164 | 81 | 0 | 12 | 175 | 5 | 168 | 1.60e-58 | 184 |
MS.gene75497.t1 | MTR_8g006970 | 45.192 | 208 | 102 | 2 | 11 | 218 | 20 | 215 | 1.91e-58 | 184 |
MS.gene75497.t1 | MTR_8g006970 | 51.786 | 168 | 81 | 0 | 7 | 174 | 2 | 169 | 1.19e-57 | 180 |
MS.gene75497.t1 | MTR_7g081700 | 43.396 | 212 | 107 | 2 | 7 | 218 | 2 | 200 | 2.64e-57 | 180 |
MS.gene75497.t1 | MTR_2g005500 | 42.723 | 213 | 110 | 2 | 6 | 218 | 2 | 202 | 1.42e-56 | 178 |
MS.gene75497.t1 | MTR_8g031680 | 49.390 | 164 | 83 | 0 | 12 | 175 | 5 | 168 | 1.19e-54 | 174 |
MS.gene75497.t1 | MTR_1g115325 | 42.105 | 209 | 113 | 3 | 11 | 218 | 13 | 214 | 1.62e-54 | 174 |
MS.gene75497.t1 | MTR_1g068740 | 47.059 | 170 | 89 | 1 | 6 | 174 | 8 | 177 | 3.47e-54 | 173 |
MS.gene75497.t1 | MTR_7g100020 | 47.879 | 165 | 85 | 1 | 11 | 174 | 13 | 177 | 9.21e-54 | 172 |
MS.gene75497.t1 | MTR_1g068730 | 46.471 | 170 | 90 | 1 | 6 | 174 | 8 | 177 | 9.72e-54 | 172 |
MS.gene75497.t1 | MTR_8g031830 | 51.634 | 153 | 74 | 0 | 12 | 164 | 5 | 157 | 1.48e-52 | 168 |
MS.gene75497.t1 | MTR_4g063160 | 41.232 | 211 | 113 | 4 | 11 | 218 | 13 | 215 | 3.61e-51 | 165 |
MS.gene75497.t1 | MTR_2g096550 | 44.578 | 166 | 90 | 2 | 11 | 174 | 13 | 178 | 6.63e-49 | 159 |
MS.gene75497.t1 | MTR_1g094220 | 46.154 | 182 | 88 | 4 | 2 | 177 | 23 | 200 | 7.84e-49 | 159 |
MS.gene75497.t1 | MTR_1g094220 | 47.093 | 172 | 85 | 3 | 2 | 171 | 23 | 190 | 7.93e-49 | 159 |
MS.gene75497.t1 | MTR_1g094220 | 47.904 | 167 | 83 | 2 | 2 | 167 | 23 | 186 | 8.77e-49 | 158 |
MS.gene75497.t1 | MTR_1g094220 | 48.214 | 168 | 81 | 3 | 2 | 167 | 23 | 186 | 2.85e-48 | 158 |
MS.gene75497.t1 | MTR_3g064390 | 46.795 | 156 | 83 | 0 | 15 | 170 | 12 | 167 | 2.85e-48 | 157 |
MS.gene75497.t1 | MTR_8g093740 | 38.350 | 206 | 115 | 4 | 1 | 195 | 1 | 205 | 5.55e-47 | 154 |
MS.gene75497.t1 | MTR_5g076590 | 41.176 | 204 | 104 | 4 | 15 | 218 | 12 | 199 | 8.22e-47 | 153 |
MS.gene75497.t1 | MTR_8g103550 | 37.745 | 204 | 110 | 2 | 15 | 218 | 11 | 197 | 3.39e-46 | 152 |
MS.gene75497.t1 | MTR_4g099470 | 42.857 | 175 | 87 | 2 | 44 | 218 | 15 | 176 | 3.65e-46 | 151 |
MS.gene75497.t1 | MTR_1g068740 | 41.916 | 167 | 86 | 2 | 6 | 171 | 8 | 164 | 4.72e-45 | 149 |
MS.gene75497.t1 | MTR_3g096350 | 37.559 | 213 | 119 | 5 | 8 | 218 | 7 | 207 | 1.93e-44 | 147 |
MS.gene75497.t1 | MTR_1g068730 | 48.855 | 131 | 67 | 0 | 6 | 136 | 8 | 138 | 2.64e-44 | 146 |
MS.gene75497.t1 | MTR_1g029450 | 37.264 | 212 | 120 | 5 | 9 | 218 | 13 | 213 | 3.04e-44 | 147 |
MS.gene75497.t1 | MTR_2g102060 | 42.308 | 156 | 90 | 0 | 15 | 170 | 12 | 167 | 6.29e-44 | 146 |
MS.gene75497.t1 | MTR_3g087160 | 39.610 | 154 | 93 | 0 | 14 | 167 | 10 | 163 | 1.80e-42 | 142 |
MS.gene75497.t1 | MTR_8g090215 | 36.571 | 175 | 106 | 1 | 14 | 183 | 10 | 184 | 2.06e-42 | 142 |
MS.gene75497.t1 | MTR_5g013900 | 39.610 | 154 | 93 | 0 | 14 | 167 | 10 | 163 | 3.24e-42 | 142 |
MS.gene75497.t1 | MTR_7g103070 | 45.283 | 159 | 85 | 2 | 11 | 167 | 14 | 172 | 3.95e-42 | 142 |
MS.gene75497.t1 | MTR_1g090717 | 42.286 | 175 | 98 | 3 | 6 | 177 | 8 | 182 | 6.18e-41 | 139 |
MS.gene75497.t1 | MTR_4g098950 | 37.662 | 154 | 96 | 0 | 14 | 167 | 10 | 163 | 9.47e-41 | 138 |
MS.gene75497.t1 | MTR_1g062760 | 42.012 | 169 | 95 | 3 | 11 | 177 | 12 | 179 | 7.43e-40 | 136 |
MS.gene75497.t1 | MTR_3g064390 | 46.400 | 125 | 67 | 0 | 15 | 139 | 12 | 136 | 5.08e-37 | 127 |
MS.gene75497.t1 | MTR_8g092020 | 38.182 | 165 | 95 | 3 | 13 | 170 | 12 | 176 | 8.85e-35 | 123 |
MS.gene75497.t1 | MTR_4g069850 | 38.788 | 165 | 94 | 3 | 13 | 170 | 8 | 172 | 1.22e-34 | 122 |
MS.gene75497.t1 | MTR_1g097420 | 38.788 | 165 | 94 | 3 | 13 | 170 | 8 | 172 | 2.21e-34 | 122 |
MS.gene75497.t1 | MTR_3g096350 | 40.714 | 140 | 77 | 4 | 8 | 145 | 7 | 142 | 2.01e-33 | 117 |
MS.gene75497.t1 | MTR_3g096350 | 44.355 | 124 | 66 | 3 | 8 | 129 | 7 | 129 | 8.20e-33 | 116 |
MS.gene75497.t1 | MTR_2g101890 | 37.576 | 165 | 96 | 3 | 13 | 170 | 10 | 174 | 1.00e-32 | 117 |
MS.gene75497.t1 | MTR_4g012940 | 37.576 | 165 | 96 | 3 | 13 | 170 | 8 | 172 | 1.27e-32 | 117 |
MS.gene75497.t1 | MTR_6g039490 | 38.182 | 165 | 95 | 4 | 13 | 170 | 8 | 172 | 1.53e-32 | 117 |
MS.gene75497.t1 | MTR_8g093740 | 35.583 | 163 | 94 | 3 | 44 | 195 | 10 | 172 | 6.14e-32 | 114 |
MS.gene75497.t1 | MTR_1g097420 | 36.527 | 167 | 97 | 4 | 11 | 170 | 35 | 199 | 1.77e-29 | 110 |
MS.gene75497.t1 | MTR_2g005500 | 31.925 | 213 | 93 | 3 | 6 | 218 | 2 | 162 | 1.28e-27 | 103 |
MS.gene75497.t1 | MTR_7g103070 | 44.348 | 115 | 62 | 2 | 55 | 167 | 2 | 116 | 1.91e-27 | 102 |
MS.gene75497.t1 | MTR_8g031810 | 44.231 | 104 | 44 | 1 | 12 | 115 | 5 | 94 | 7.03e-24 | 91.7 |
MS.gene75497.t1 | MTR_3g107713 | 28.986 | 207 | 130 | 5 | 8 | 211 | 7 | 199 | 1.00e-23 | 94.7 |
MS.gene75497.t1 | MTR_3g107707 | 28.986 | 207 | 130 | 5 | 8 | 211 | 7 | 199 | 1.03e-23 | 94.7 |
MS.gene75497.t1 | MTR_3g107717 | 29.126 | 206 | 129 | 5 | 8 | 210 | 7 | 198 | 4.11e-23 | 93.2 |
MS.gene75497.t1 | MTR_1g069245 | 46.316 | 95 | 47 | 2 | 26 | 120 | 109 | 199 | 2.03e-21 | 88.6 |
MS.gene75497.t1 | MTR_2g090875 | 33.333 | 165 | 96 | 5 | 15 | 167 | 8 | 170 | 5.45e-21 | 87.0 |
MS.gene75497.t1 | MTR_3g078260 | 28.856 | 201 | 129 | 5 | 15 | 203 | 10 | 208 | 2.89e-20 | 85.5 |
MS.gene75497.t1 | MTR_6g087980 | 29.412 | 187 | 118 | 5 | 15 | 189 | 8 | 192 | 3.92e-20 | 85.1 |
MS.gene75497.t1 | MTR_2g078000 | 65.306 | 49 | 17 | 0 | 74 | 122 | 46 | 94 | 6.77e-20 | 81.6 |
MS.gene75497.t1 | MTR_4g088055 | 30.909 | 165 | 100 | 5 | 15 | 167 | 8 | 170 | 8.34e-20 | 84.0 |
MS.gene75497.t1 | MTR_1452s0010 | 46.835 | 79 | 42 | 0 | 33 | 111 | 1 | 79 | 5.72e-19 | 79.0 |
MS.gene75497.t1 | MTR_4g073250 | 35.294 | 119 | 74 | 3 | 15 | 132 | 8 | 124 | 2.82e-18 | 79.7 |
MS.gene75497.t1 | MTR_8g075240 | 31.325 | 166 | 98 | 6 | 15 | 167 | 8 | 170 | 1.57e-17 | 77.8 |
MS.gene75497.t1 | MTR_5g022600 | 31.325 | 166 | 98 | 6 | 15 | 167 | 8 | 170 | 4.76e-17 | 76.6 |
MS.gene75497.t1 | MTR_4g113620 | 26.761 | 213 | 130 | 7 | 8 | 217 | 7 | 196 | 1.45e-16 | 75.5 |
MS.gene75497.t1 | MTR_3g078260 | 34.211 | 114 | 72 | 3 | 15 | 127 | 10 | 121 | 8.99e-16 | 72.0 |
MS.gene75497.t1 | MTR_1686s0010 | 38.043 | 92 | 57 | 0 | 33 | 124 | 1 | 92 | 2.37e-15 | 69.3 |
MS.gene75497.t1 | MTR_2g078560 | 48.485 | 66 | 28 | 1 | 73 | 132 | 52 | 117 | 2.62e-15 | 73.6 |
MS.gene75497.t1 | MTR_1g059590 | 31.447 | 159 | 102 | 3 | 16 | 174 | 398 | 549 | 3.09e-15 | 74.3 |
MS.gene75497.t1 | MTR_1g059590 | 31.447 | 159 | 102 | 3 | 16 | 174 | 431 | 582 | 3.27e-15 | 74.3 |
MS.gene75497.t1 | MTR_3g053480 | 54.717 | 53 | 24 | 0 | 7 | 59 | 10 | 62 | 2.36e-14 | 65.9 |
MS.gene75497.t1 | MTR_8g099250 | 56.863 | 51 | 22 | 0 | 7 | 57 | 10 | 60 | 7.79e-14 | 64.7 |
MS.gene75497.t1 | MTR_5g092060 | 26.744 | 172 | 114 | 5 | 14 | 177 | 105 | 272 | 2.52e-13 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene75497.t1 | AT5G65270 | 85.845 | 219 | 29 | 2 | 2 | 218 | 6 | 224 | 8.63e-138 | 385 |
MS.gene75497.t1 | AT4G39990 | 80.569 | 211 | 38 | 2 | 9 | 218 | 13 | 221 | 6.36e-126 | 355 |
MS.gene75497.t1 | AT3G12160 | 75.926 | 216 | 51 | 1 | 3 | 218 | 5 | 219 | 2.38e-123 | 348 |
MS.gene75497.t1 | AT5G47960 | 74.057 | 212 | 54 | 1 | 7 | 217 | 9 | 220 | 1.03e-114 | 327 |
MS.gene75497.t1 | AT1G09630 | 60.190 | 211 | 82 | 1 | 7 | 217 | 6 | 214 | 2.11e-94 | 275 |
MS.gene75497.t1 | AT1G07410 | 60.849 | 212 | 78 | 1 | 7 | 218 | 6 | 212 | 3.54e-93 | 272 |
MS.gene75497.t1 | AT4G18800 | 60.563 | 213 | 78 | 2 | 6 | 218 | 6 | 212 | 4.17e-91 | 266 |
MS.gene75497.t1 | AT1G16920 | 61.058 | 208 | 77 | 2 | 11 | 218 | 11 | 214 | 4.11e-90 | 264 |
MS.gene75497.t1 | AT4G18430 | 56.364 | 220 | 89 | 2 | 1 | 218 | 1 | 215 | 7.43e-90 | 263 |
MS.gene75497.t1 | AT5G45750 | 60.563 | 213 | 80 | 2 | 6 | 218 | 6 | 214 | 1.50e-89 | 263 |
MS.gene75497.t1 | AT3G46830 | 69.143 | 175 | 54 | 0 | 7 | 181 | 6 | 180 | 2.79e-89 | 262 |
MS.gene75497.t1 | AT3G46830 | 69.143 | 175 | 54 | 0 | 7 | 181 | 6 | 180 | 2.79e-89 | 262 |
MS.gene75497.t1 | AT2G33870 | 57.273 | 220 | 88 | 2 | 1 | 218 | 1 | 216 | 5.04e-89 | 261 |
MS.gene75497.t1 | AT5G59150 | 69.540 | 174 | 53 | 0 | 8 | 181 | 7 | 180 | 1.64e-88 | 260 |
MS.gene75497.t1 | AT1G28550 | 58.182 | 220 | 86 | 2 | 1 | 218 | 1 | 216 | 2.52e-88 | 259 |
MS.gene75497.t1 | AT5G47520 | 57.604 | 217 | 90 | 2 | 3 | 218 | 4 | 219 | 2.13e-87 | 257 |
MS.gene75497.t1 | AT1G01200 | 60.369 | 217 | 75 | 5 | 8 | 217 | 23 | 235 | 1.09e-86 | 256 |
MS.gene75497.t1 | AT5G60860 | 57.674 | 215 | 84 | 3 | 6 | 218 | 6 | 215 | 1.97e-86 | 255 |
MS.gene75497.t1 | AT1G06400 | 57.944 | 214 | 84 | 2 | 6 | 218 | 6 | 214 | 4.43e-86 | 254 |
MS.gene75497.t1 | AT3G15060 | 56.744 | 215 | 86 | 3 | 6 | 218 | 6 | 215 | 1.90e-85 | 252 |
MS.gene75497.t1 | AT1G05810 | 63.636 | 176 | 64 | 0 | 11 | 186 | 10 | 185 | 2.19e-82 | 244 |
MS.gene75497.t1 | AT1G05810 | 63.636 | 176 | 64 | 0 | 11 | 186 | 56 | 231 | 3.48e-82 | 246 |
MS.gene75497.t1 | AT2G43130 | 54.808 | 208 | 89 | 1 | 11 | 218 | 10 | 212 | 6.19e-81 | 241 |
MS.gene75497.t1 | AT2G31680 | 61.364 | 176 | 68 | 0 | 11 | 186 | 10 | 185 | 2.27e-80 | 239 |
MS.gene75497.t1 | AT3G07410 | 63.068 | 176 | 65 | 0 | 11 | 186 | 10 | 185 | 7.57e-79 | 236 |
MS.gene75497.t1 | AT1G73640 | 51.339 | 224 | 96 | 4 | 8 | 218 | 8 | 231 | 5.76e-75 | 226 |
MS.gene75497.t1 | AT1G18200 | 51.707 | 205 | 95 | 2 | 7 | 211 | 7 | 207 | 1.59e-74 | 225 |
MS.gene75497.t1 | AT5G59150 | 70.400 | 125 | 37 | 0 | 57 | 181 | 5 | 129 | 7.70e-62 | 191 |
MS.gene75497.t1 | AT4G17170 | 44.076 | 211 | 109 | 3 | 12 | 218 | 5 | 210 | 1.12e-60 | 189 |
MS.gene75497.t1 | AT1G02130 | 46.226 | 212 | 102 | 3 | 7 | 218 | 2 | 201 | 1.25e-60 | 189 |
MS.gene75497.t1 | AT4G35860 | 43.192 | 213 | 110 | 2 | 11 | 218 | 4 | 210 | 1.83e-59 | 186 |
MS.gene75497.t1 | AT4G17160 | 44.340 | 212 | 101 | 3 | 12 | 218 | 5 | 204 | 2.19e-59 | 186 |
MS.gene75497.t1 | AT4G17530 | 44.811 | 212 | 104 | 2 | 7 | 218 | 2 | 200 | 1.60e-57 | 181 |
MS.gene75497.t1 | AT5G47200 | 44.811 | 212 | 104 | 2 | 7 | 218 | 2 | 200 | 1.64e-57 | 181 |
MS.gene75497.t1 | AT3G11730 | 45.455 | 209 | 102 | 5 | 11 | 218 | 6 | 203 | 1.85e-56 | 178 |
MS.gene75497.t1 | AT5G59840 | 41.627 | 209 | 114 | 3 | 11 | 218 | 13 | 214 | 5.19e-54 | 172 |
MS.gene75497.t1 | AT3G46060 | 41.627 | 209 | 114 | 3 | 11 | 218 | 13 | 214 | 5.67e-54 | 172 |
MS.gene75497.t1 | AT3G46060 | 41.627 | 209 | 114 | 3 | 11 | 218 | 13 | 214 | 5.67e-54 | 172 |
MS.gene75497.t1 | AT3G46060 | 41.627 | 209 | 114 | 3 | 11 | 218 | 13 | 214 | 5.67e-54 | 172 |
MS.gene75497.t1 | AT5G03520 | 41.121 | 214 | 117 | 3 | 6 | 218 | 8 | 213 | 1.95e-52 | 168 |
MS.gene75497.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 11 | 174 | 13 | 177 | 2.35e-52 | 168 |
MS.gene75497.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 11 | 174 | 13 | 177 | 2.35e-52 | 168 |
MS.gene75497.t1 | AT3G53610 | 46.667 | 165 | 87 | 1 | 11 | 174 | 13 | 177 | 2.35e-52 | 168 |
MS.gene75497.t1 | AT3G54840 | 51.948 | 154 | 73 | 1 | 15 | 167 | 35 | 188 | 1.21e-51 | 166 |
MS.gene75497.t1 | AT3G54840 | 51.948 | 154 | 73 | 1 | 15 | 167 | 35 | 188 | 2.04e-51 | 165 |
MS.gene75497.t1 | AT3G09900 | 46.471 | 170 | 90 | 1 | 6 | 174 | 8 | 177 | 3.76e-51 | 165 |
MS.gene75497.t1 | AT3G54840 | 51.634 | 153 | 73 | 1 | 16 | 167 | 2 | 154 | 7.55e-51 | 162 |
MS.gene75497.t1 | AT1G43890 | 41.509 | 212 | 109 | 6 | 1 | 209 | 1 | 200 | 1.26e-47 | 156 |
MS.gene75497.t1 | AT1G43890 | 41.509 | 212 | 109 | 6 | 1 | 209 | 1 | 200 | 1.26e-47 | 156 |
MS.gene75497.t1 | AT1G43890 | 41.509 | 212 | 109 | 6 | 1 | 209 | 1 | 200 | 1.26e-47 | 156 |
MS.gene75497.t1 | AT4G19640 | 37.745 | 204 | 111 | 1 | 15 | 218 | 12 | 199 | 1.66e-47 | 155 |
MS.gene75497.t1 | AT5G45130 | 44.231 | 156 | 87 | 0 | 15 | 170 | 12 | 167 | 3.08e-45 | 149 |
MS.gene75497.t1 | AT4G35860 | 52.066 | 121 | 58 | 0 | 55 | 175 | 2 | 122 | 1.76e-44 | 146 |
MS.gene75497.t1 | AT5G45130 | 44.156 | 154 | 86 | 0 | 17 | 170 | 22 | 175 | 5.68e-44 | 146 |
MS.gene75497.t1 | AT2G22290 | 40.260 | 154 | 92 | 0 | 14 | 167 | 10 | 163 | 5.29e-43 | 144 |
MS.gene75497.t1 | AT5G10260 | 38.961 | 154 | 94 | 0 | 14 | 167 | 10 | 163 | 7.64e-42 | 141 |
MS.gene75497.t1 | AT2G44610 | 38.312 | 154 | 95 | 0 | 14 | 167 | 10 | 163 | 3.72e-41 | 139 |
MS.gene75497.t1 | AT4G39890 | 38.065 | 155 | 95 | 1 | 14 | 167 | 10 | 164 | 6.08e-41 | 139 |
MS.gene75497.t1 | AT5G03530 | 35.874 | 223 | 124 | 5 | 1 | 218 | 1 | 209 | 6.82e-41 | 139 |
MS.gene75497.t1 | AT5G03530 | 35.874 | 223 | 124 | 5 | 1 | 218 | 1 | 209 | 6.82e-41 | 139 |
MS.gene75497.t1 | AT5G03520 | 39.535 | 172 | 95 | 3 | 48 | 218 | 40 | 203 | 1.78e-40 | 137 |
MS.gene75497.t1 | AT5G64990 | 35.404 | 161 | 104 | 0 | 14 | 174 | 8 | 168 | 4.45e-37 | 129 |
MS.gene75497.t1 | AT4G19640 | 38.365 | 159 | 97 | 1 | 15 | 173 | 12 | 169 | 1.53e-36 | 127 |
MS.gene75497.t1 | AT4G19640 | 44.000 | 125 | 70 | 0 | 15 | 139 | 12 | 136 | 1.11e-35 | 123 |
MS.gene75497.t1 | AT1G22740 | 39.394 | 165 | 93 | 3 | 13 | 170 | 8 | 172 | 4.52e-35 | 123 |
MS.gene75497.t1 | AT2G21880 | 39.394 | 165 | 93 | 3 | 13 | 170 | 9 | 173 | 5.93e-35 | 123 |
MS.gene75497.t1 | AT3G18820 | 39.394 | 165 | 93 | 3 | 13 | 170 | 8 | 172 | 1.74e-34 | 122 |
MS.gene75497.t1 | AT4G09720 | 40.000 | 165 | 92 | 3 | 13 | 170 | 8 | 172 | 1.94e-34 | 122 |
MS.gene75497.t1 | AT5G64990 | 33.929 | 168 | 104 | 1 | 14 | 174 | 8 | 175 | 2.38e-34 | 122 |
MS.gene75497.t1 | AT1G52280 | 37.647 | 170 | 99 | 3 | 13 | 175 | 8 | 177 | 3.89e-34 | 121 |
MS.gene75497.t1 | AT1G49300 | 38.323 | 167 | 96 | 3 | 13 | 172 | 8 | 174 | 1.44e-33 | 120 |
MS.gene75497.t1 | AT1G49300 | 38.323 | 167 | 96 | 3 | 13 | 172 | 8 | 174 | 1.44e-33 | 120 |
MS.gene75497.t1 | AT4G09720 | 38.824 | 170 | 92 | 3 | 13 | 170 | 8 | 177 | 1.70e-33 | 120 |
MS.gene75497.t1 | AT5G46025 | 54.286 | 105 | 47 | 1 | 75 | 178 | 6 | 110 | 3.81e-33 | 115 |
MS.gene75497.t1 | AT3G09910 | 37.430 | 179 | 109 | 3 | 1 | 177 | 1 | 178 | 1.76e-32 | 117 |
MS.gene75497.t1 | AT3G09910 | 37.430 | 179 | 109 | 3 | 1 | 177 | 1 | 178 | 1.76e-32 | 117 |
MS.gene75497.t1 | AT3G09910 | 37.430 | 179 | 109 | 3 | 1 | 177 | 1 | 178 | 1.76e-32 | 117 |
MS.gene75497.t1 | AT4G09720 | 37.500 | 176 | 92 | 3 | 13 | 170 | 8 | 183 | 2.00e-32 | 117 |
MS.gene75497.t1 | AT3G09910 | 39.053 | 169 | 100 | 3 | 1 | 167 | 1 | 168 | 5.42e-32 | 115 |
MS.gene75497.t1 | AT3G09910 | 39.053 | 169 | 100 | 3 | 1 | 167 | 1 | 168 | 5.42e-32 | 115 |
MS.gene75497.t1 | AT3G16100 | 36.970 | 165 | 97 | 3 | 13 | 170 | 8 | 172 | 1.14e-31 | 115 |
MS.gene75497.t1 | AT5G39620 | 31.604 | 212 | 125 | 5 | 14 | 218 | 6 | 204 | 5.56e-30 | 110 |
MS.gene75497.t1 | AT2G21880 | 38.514 | 148 | 84 | 3 | 30 | 170 | 1 | 148 | 1.59e-27 | 103 |
MS.gene75497.t1 | AT2G21880 | 38.514 | 148 | 84 | 3 | 30 | 170 | 1 | 148 | 1.59e-27 | 103 |
MS.gene75497.t1 | AT5G55080 | 31.548 | 168 | 111 | 3 | 8 | 174 | 7 | 171 | 1.30e-25 | 99.8 |
MS.gene75497.t1 | AT4G09720 | 41.481 | 135 | 72 | 3 | 43 | 170 | 4 | 138 | 1.41e-25 | 98.2 |
MS.gene75497.t1 | AT4G09720 | 41.481 | 135 | 72 | 3 | 43 | 170 | 4 | 138 | 1.41e-25 | 98.2 |
MS.gene75497.t1 | AT4G09720 | 41.481 | 135 | 72 | 3 | 43 | 170 | 4 | 138 | 1.41e-25 | 98.2 |
MS.gene75497.t1 | AT2G21880 | 34.545 | 165 | 93 | 4 | 13 | 170 | 9 | 165 | 3.21e-25 | 98.2 |
MS.gene75497.t1 | AT2G44690 | 35.758 | 165 | 92 | 5 | 15 | 167 | 20 | 182 | 2.05e-24 | 96.3 |
MS.gene75497.t1 | AT5G20020 | 29.126 | 206 | 129 | 5 | 8 | 210 | 7 | 198 | 2.71e-23 | 93.6 |
MS.gene75497.t1 | AT5G55190 | 29.126 | 206 | 129 | 5 | 8 | 210 | 7 | 198 | 4.21e-23 | 93.2 |
MS.gene75497.t1 | AT5G20010 | 30.435 | 184 | 111 | 5 | 8 | 188 | 7 | 176 | 9.56e-23 | 92.0 |
MS.gene75497.t1 | AT3G48040 | 32.121 | 165 | 98 | 5 | 15 | 167 | 10 | 172 | 1.02e-19 | 84.0 |
MS.gene75497.t1 | AT1G20090 | 32.727 | 165 | 97 | 6 | 15 | 167 | 7 | 169 | 3.70e-19 | 82.0 |
MS.gene75497.t1 | AT5G45970 | 31.361 | 169 | 102 | 5 | 15 | 171 | 8 | 174 | 3.77e-19 | 82.4 |
MS.gene75497.t1 | AT4G35020 | 32.168 | 143 | 87 | 4 | 15 | 156 | 8 | 141 | 4.15e-19 | 82.0 |
MS.gene75497.t1 | AT4G35020 | 32.168 | 143 | 87 | 4 | 15 | 156 | 8 | 141 | 4.15e-19 | 82.0 |
MS.gene75497.t1 | AT4G35020 | 32.168 | 143 | 87 | 4 | 15 | 156 | 8 | 141 | 4.15e-19 | 82.0 |
MS.gene75497.t1 | AT1G75840 | 32.121 | 165 | 98 | 6 | 15 | 167 | 8 | 170 | 4.76e-19 | 82.0 |
MS.gene75497.t1 | AT5G62880 | 30.233 | 172 | 106 | 5 | 15 | 174 | 10 | 179 | 6.52e-19 | 82.0 |
MS.gene75497.t1 | AT3G48040 | 36.364 | 121 | 74 | 3 | 15 | 134 | 10 | 128 | 4.40e-18 | 79.0 |
MS.gene75497.t1 | AT3G51300 | 30.909 | 165 | 100 | 6 | 15 | 167 | 8 | 170 | 5.57e-18 | 79.0 |
MS.gene75497.t1 | AT4G28950 | 25.641 | 195 | 133 | 4 | 14 | 198 | 7 | 199 | 1.41e-17 | 78.2 |
MS.gene75497.t1 | AT5G62880 | 34.711 | 121 | 76 | 3 | 15 | 134 | 10 | 128 | 1.67e-17 | 77.8 |
MS.gene75497.t1 | AT2G17800 | 30.909 | 165 | 100 | 6 | 15 | 167 | 8 | 170 | 2.41e-17 | 77.4 |
MS.gene75497.t1 | AT2G17800 | 30.909 | 165 | 100 | 6 | 15 | 167 | 8 | 170 | 2.41e-17 | 77.4 |
MS.gene75497.t1 | AT4G08190 | 59.375 | 64 | 23 | 1 | 104 | 167 | 67 | 127 | 2.85e-17 | 75.5 |
MS.gene75497.t1 | AT4G35950 | 30.909 | 165 | 100 | 6 | 15 | 167 | 8 | 170 | 3.00e-17 | 77.0 |
MS.gene75497.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 15 | 127 | 8 | 119 | 2.62e-16 | 73.2 |
MS.gene75497.t1 | AT4G35020 | 33.333 | 114 | 73 | 3 | 15 | 127 | 8 | 119 | 2.62e-16 | 73.2 |
MS.gene75497.t1 | AT3G22950 | 29.167 | 120 | 79 | 3 | 14 | 132 | 18 | 132 | 5.42e-11 | 59.7 |
MS.gene75497.t1 | AT3G22950 | 29.167 | 120 | 79 | 3 | 14 | 132 | 18 | 132 | 5.42e-11 | 59.7 |
Find 46 sgRNAs with CRISPR-Local
Find 205 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGACAACACATGCTCTTCTT+AGG | 0.168776 | 3.3:+72530015 | None:intergenic |
AATATAGTCATCATTCTTAT+AGG | 0.279237 | 3.3:-72530297 | MS.gene75497:CDS |
CATACTACAGGGGCGCTGTT+GGG | 0.366375 | 3.3:-72530407 | MS.gene75497:CDS |
CCTGGCTGCTGATAAGAATC+AGG | 0.369292 | 3.3:-72530103 | MS.gene75497:CDS |
AGAAAGAAGAGAACCGTTCT+TGG | 0.377427 | 3.3:+72532752 | None:intergenic |
GTGATCGAAGCTCGGACGTT+TGG | 0.386754 | 3.3:+72530362 | None:intergenic |
GGCAAGAAGATTATTGTTCC+TGG | 0.407195 | 3.3:-72530054 | MS.gene75497:CDS |
GACAACACATGCTCTTCTTA+GGG | 0.416162 | 3.3:+72530016 | None:intergenic |
AGAGTGTTAAGGCTCAGATC+TGG | 0.425788 | 3.3:-72532786 | MS.gene75497:CDS |
GGGCGCTGTTGGGGCAATGT+TGG | 0.427779 | 3.3:-72530397 | MS.gene75497:CDS |
GTCTTCAAGGTGGTTCTAAT+CGG | 0.432686 | 3.3:-72532928 | MS.gene75497:CDS |
TTCTTAGGGATTTCTTGTGC+AGG | 0.438762 | 3.3:+72530030 | None:intergenic |
TGAGTTTCAAACTCGTACTT+TGG | 0.440485 | 3.3:-72532821 | MS.gene75497:CDS |
AAAGAATTTGCTGAGAAAGA+AGG | 0.441025 | 3.3:-72530225 | MS.gene75497:CDS |
GAAGATAGACTACGTCTTCA+AGG | 0.447575 | 3.3:-72532941 | MS.gene75497:CDS |
GCATACTACAGGGGCGCTGT+TGG | 0.449830 | 3.3:-72530408 | MS.gene75497:CDS |
TGAAGACGTAGTCTATCTTC+TGG | 0.451825 | 3.3:+72532944 | None:intergenic |
CGCAGTTCTTCTAACCATCT+AGG | 0.458553 | 3.3:+72530336 | None:intergenic |
CCTGATTCTTATCAGCAGCC+AGG | 0.467947 | 3.3:+72530103 | None:intergenic |
AGGAACAATAATCTTCTTGC+CGG | 0.480386 | 3.3:+72530056 | None:intergenic |
GCTGATAAGAATCAGGGAAA+TGG | 0.485728 | 3.3:-72530096 | MS.gene75497:CDS |
TATTGAACATAAGAGTGTTA+AGG | 0.489565 | 3.3:-72532797 | MS.gene75497:CDS |
CAGTTACAAGTGCATACTAC+AGG | 0.490649 | 3.3:-72530419 | MS.gene75497:CDS |
GCTTCGATCACATACCTAGA+TGG | 0.498381 | 3.3:-72530350 | MS.gene75497:CDS |
GGCAACTCAGCATCTCTGTC+CGG | 0.499309 | 3.3:-72530075 | MS.gene75497:CDS |
GGGATTTCTTGTGCAGGACC+AGG | 0.502312 | 3.3:+72530036 | None:intergenic |
ATACTACAGGGGCGCTGTTG+GGG | 0.525539 | 3.3:-72530406 | MS.gene75497:CDS |
GCTCAGATCTGGGACACTGC+TGG | 0.529753 | 3.3:-72532775 | MS.gene75497:CDS |
GAGTGTTAAGGCTCAGATCT+GGG | 0.538288 | 3.3:-72532785 | MS.gene75497:CDS |
TTCTGTCAAAACAGTCATGA+AGG | 0.542515 | 3.3:+72530152 | None:intergenic |
GTGGACTCAAAAGCTACAAT+CGG | 0.568023 | 3.3:-72532847 | MS.gene75497:CDS |
CATTGTCAACAAGAAGAACC+TGG | 0.569186 | 3.3:-72530121 | MS.gene75497:CDS |
CTAATCGGTGATTCTGCAGT+CGG | 0.575717 | 3.3:-72532913 | MS.gene75497:CDS |
GGGACACTGCTGGCCAAGAA+CGG | 0.580774 | 3.3:-72532765 | MS.gene75497:intron |
AGGAAACAAAAGTGATCTTG+AGG | 0.580983 | 3.3:-72530277 | MS.gene75497:CDS |
CTAGGTATGTGATCGAAGCT+CGG | 0.584273 | 3.3:+72530354 | None:intergenic |
AGTTACAAGTGCATACTACA+GGG | 0.605565 | 3.3:-72530418 | MS.gene75497:CDS |
GAAAATCTCAGATACTAGCT+CGG | 0.614980 | 3.3:-72532891 | MS.gene75497:CDS |
CTGGCTGCTGATAAGAATCA+GGG | 0.627817 | 3.3:-72530102 | MS.gene75497:CDS |
TGACTATATTCTTGTCAGCA+TGG | 0.639191 | 3.3:+72530310 | None:intergenic |
ATTAGTTGCTTGCAGCGCAG+AGG | 0.640396 | 3.3:+72530185 | None:intergenic |
GCAAGCAACTAATGTTGAGA+CGG | 0.646912 | 3.3:-72530175 | MS.gene75497:CDS |
TGCAAGAAACGACTTCAGCG+TGG | 0.696247 | 3.3:-72532866 | MS.gene75497:CDS |
GTTACAAGTGCATACTACAG+GGG | 0.696627 | 3.3:-72530417 | MS.gene75497:CDS |
GCAGCGTGCAGTACCCACAG+AGG | 0.703658 | 3.3:-72530253 | MS.gene75497:CDS |
GATAGACTACGTCTTCAAGG+TGG | 0.739113 | 3.3:-72532938 | MS.gene75497:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTTTTTTTTTTTTTTAAATT+CGG | + | chr3.3:72530937-72530956 | None:intergenic | 0.0% |
!!! | AATTATATCAAATTTAAAAC+TGG | + | chr3.3:72531367-72531386 | None:intergenic | 10.0% |
!! | TGTACTTGTAATTTAAATAT+TGG | + | chr3.3:72532723-72532742 | None:intergenic | 15.0% |
!!! | ACTGTTGATAAATAAATATT+TGG | + | chr3.3:72531973-72531992 | None:intergenic | 15.0% |
!!! | GAAGAAAAACATAAATTTTA+TGG | - | chr3.3:72531613-72531632 | MS.gene75497:intron | 15.0% |
!! | AAAAAAATCTAGTATGTGAA+TGG | - | chr3.3:72530950-72530969 | MS.gene75497:intron | 20.0% |
!! | AATATAGTCATCATTCTTAT+AGG | - | chr3.3:72532926-72532945 | MS.gene75497:CDS | 20.0% |
!!! | ATGATTTTTATTTCAAAGAG+TGG | + | chr3.3:72532462-72532481 | None:intergenic | 20.0% |
!!! | ATTTTCAAAATCAGCAATTT+TGG | - | chr3.3:72532534-72532553 | MS.gene75497:intron | 20.0% |
!!! | GTTTATTTATCTGAAGTTAA+TGG | - | chr3.3:72530616-72530635 | MS.gene75497:intron | 20.0% |
!!! | GTTTTGTACTATTTTTTCTA+CGG | - | chr3.3:72532647-72532666 | MS.gene75497:intron | 20.0% |
!!! | GTTTTGTCTGATTTTATAAA+TGG | - | chr3.3:72532759-72532778 | MS.gene75497:intron | 20.0% |
!!! | TAATTGATTAGTTGAATTAG+CGG | + | chr3.3:72530180-72530199 | None:intergenic | 20.0% |
! | ATTGGTTGAGTAAAAAAACA+TGG | + | chr3.3:72532610-72532629 | None:intergenic | 25.0% |
! | GAACCAAATCATTTATTCAT+GGG | + | chr3.3:72531856-72531875 | None:intergenic | 25.0% |
! | TAAATTACAAGTACATCGAA+TGG | - | chr3.3:72532728-72532747 | MS.gene75497:intron | 25.0% |
! | TAATAGTTGTAAAGAGAAGA+AGG | - | chr3.3:72531674-72531693 | MS.gene75497:intron | 25.0% |
! | TATGTGAATTAACCCATTTA+GGG | - | chr3.3:72530886-72530905 | MS.gene75497:intron | 25.0% |
! | TGATTATTTATAGAGCAGTT+AGG | - | chr3.3:72531547-72531566 | MS.gene75497:intron | 25.0% |
! | TTGGTTGAGTAAAAAAACAT+GGG | + | chr3.3:72532609-72532628 | None:intergenic | 25.0% |
!! | AACCTTTTGTACATATTAAC+AGG | + | chr3.3:72532397-72532416 | None:intergenic | 25.0% |
!! | AATTGATTAGTTGAATTAGC+GGG | + | chr3.3:72530179-72530198 | None:intergenic | 25.0% |
!! | TATCAATAACACGTTTTCAA+AGG | + | chr3.3:72532511-72532530 | None:intergenic | 25.0% |
!! | TCAAATTTAAAACTGGAATG+TGG | + | chr3.3:72531360-72531379 | None:intergenic | 25.0% |
!! | TGATTTTACCATAAGTTCAA+AGG | + | chr3.3:72531199-72531218 | None:intergenic | 25.0% |
!!! | ACCATATTTTGATTTGAAAC+CGG | + | chr3.3:72531223-72531242 | None:intergenic | 25.0% |
!!! | ATGTATTGACTGATTTCAAT+TGG | - | chr3.3:72531298-72531317 | MS.gene75497:intron | 25.0% |
!!! | TATTGAACATAAGAGTGTTA+AGG | - | chr3.3:72530426-72530445 | MS.gene75497:CDS | 25.0% |
!!! | TTGTTTATTGTTTTTGCCAA+TGG | - | chr3.3:72530765-72530784 | MS.gene75497:intron | 25.0% |
!!! | TTTGAATTTGGTTTGAAAAG+TGG | + | chr3.3:72530156-72530175 | None:intergenic | 25.0% |
AAATACTTGTAGGGAGAAAT+GGG | + | chr3.3:72532256-72532275 | None:intergenic | 30.0% | |
AACTAATCTATTGTTTCCTC+CGG | - | chr3.3:72530045-72530064 | MS.gene75497:CDS | 30.0% | |
ACCACTATTAGCATACTATA+TGG | + | chr3.3:72531138-72531157 | None:intergenic | 30.0% | |
AGATTTATGAAACTTACGAG+GGG | - | chr3.3:72530991-72531010 | MS.gene75497:intron | 30.0% | |
AGCCTGTTAATATGTACAAA+AGG | - | chr3.3:72532392-72532411 | MS.gene75497:intron | 30.0% | |
ATACTTCTGATCATTTCATC+AGG | - | chr3.3:72532694-72532713 | MS.gene75497:intron | 30.0% | |
CAATGATTCCTTTGAACTTA+TGG | - | chr3.3:72531188-72531207 | MS.gene75497:intron | 30.0% | |
CAGATTTATGAAACTTACGA+GGG | - | chr3.3:72530990-72531009 | MS.gene75497:intron | 30.0% | |
CAGTAAAGTGAGAAAATCAA+TGG | - | chr3.3:72531892-72531911 | MS.gene75497:intron | 30.0% | |
GAAATCAAAAGCAAGAACAA+TGG | - | chr3.3:72530231-72530250 | MS.gene75497:CDS | 30.0% | |
GAACTTATGGTAAAATCATC+CGG | - | chr3.3:72531201-72531220 | MS.gene75497:intron | 30.0% | |
GGAACCAAATCATTTATTCA+TGG | + | chr3.3:72531857-72531876 | None:intergenic | 30.0% | |
GTATGTGAATTAACCCATTT+AGG | - | chr3.3:72530885-72530904 | MS.gene75497:intron | 30.0% | |
GTCAAAAAGTGATTTATGAC+AGG | + | chr3.3:72530121-72530140 | None:intergenic | 30.0% | |
GTGTCAAACAAATTCAAGAT+TGG | + | chr3.3:72530669-72530688 | None:intergenic | 30.0% | |
GTTATATAAGTCCACAGATT+TGG | + | chr3.3:72531324-72531343 | None:intergenic | 30.0% | |
TACTTCTGATCATTTCATCA+GGG | - | chr3.3:72532695-72532714 | MS.gene75497:intron | 30.0% | |
TCCATATAGTATGCTAATAG+TGG | - | chr3.3:72531134-72531153 | MS.gene75497:intron | 30.0% | |
TCCGGTTTCAAATCAAAATA+TGG | - | chr3.3:72531219-72531238 | MS.gene75497:intron | 30.0% | |
TGTTCATATACATAGTGTGT+TGG | + | chr3.3:72531408-72531427 | None:intergenic | 30.0% | |
TTTCAACTTTCAACCTTCTT+GGG | - | chr3.3:72530068-72530087 | MS.gene75497:CDS | 30.0% | |
! | ACTTTACTGATTACTCACTT+TGG | + | chr3.3:72531881-72531900 | None:intergenic | 30.0% |
! | AGCAAGTATCTGTTACTTAA+GGG | + | chr3.3:72532215-72532234 | None:intergenic | 30.0% |
! | TATGTTGCTTAAACAAAGCT+GGG | - | chr3.3:72531708-72531727 | MS.gene75497:intron | 30.0% |
! | TTTTTGCCAATGGTTTCTTT+GGG | - | chr3.3:72530775-72530794 | MS.gene75497:intron | 30.0% |
!! | AAAGAATTTGCTGAGAAAGA+AGG | - | chr3.3:72532998-72533017 | MS.gene75497:intron | 30.0% |
!! | GCTGATTATTTTTCTGTCTT+GGG | - | chr3.3:72532556-72532575 | MS.gene75497:intron | 30.0% |
!! | TTGGTTTTCGATTTTGAATG+TGG | + | chr3.3:72530211-72530230 | None:intergenic | 30.0% |
!!! | TGTTCTTGCTTTTGATTTCT+TGG | + | chr3.3:72530230-72530249 | None:intergenic | 30.0% |
AAGTGATTTATGACAGGTTG+CGG | + | chr3.3:72530115-72530134 | None:intergenic | 35.0% | |
AGAAGGTTGAAAGTTGAAAC+CGG | + | chr3.3:72530067-72530086 | None:intergenic | 35.0% | |
AGGAAACAAAAGTGATCTTG+AGG | - | chr3.3:72532946-72532965 | MS.gene75497:CDS | 35.0% | |
AGGAACAATAATCTTCTTGC+CGG | + | chr3.3:72533170-72533189 | None:intergenic | 35.0% | |
AGTTACAAGTGCATACTACA+GGG | - | chr3.3:72532805-72532824 | MS.gene75497:CDS | 35.0% | |
ATTCTGTGATACTAGCATAC+TGG | + | chr3.3:72532352-72532371 | None:intergenic | 35.0% | |
ATTTACTTGAATGACACGTG+TGG | - | chr3.3:72531494-72531513 | MS.gene75497:intron | 35.0% | |
ATTTCAATTGGCCAAATCTG+TGG | - | chr3.3:72531310-72531329 | MS.gene75497:intron | 35.0% | |
ATTTGGAAGTTGGGAGAAAA+TGG | - | chr3.3:72531590-72531609 | MS.gene75497:intron | 35.0% | |
CAGCCCATGAATAAATGATT+TGG | - | chr3.3:72531850-72531869 | MS.gene75497:intron | 35.0% | |
CAGTTTGCATGCTCTTTAAT+CGG | - | chr3.3:72531062-72531081 | MS.gene75497:intron | 35.0% | |
CCAGAAAGGAAATACTTGTA+GGG | + | chr3.3:72532265-72532284 | None:intergenic | 35.0% | |
CGCAGGATTTAAGTAAGAAA+AGG | - | chr3.3:72530833-72530852 | MS.gene75497:intron | 35.0% | |
CTCTAATTTATTGCTGGATC+AGG | + | chr3.3:72532045-72532064 | None:intergenic | 35.0% | |
GAAAATCTCAGATACTAGCT+CGG | - | chr3.3:72530332-72530351 | MS.gene75497:CDS | 35.0% | |
GAAATACTTGTAGGGAGAAA+TGG | + | chr3.3:72532257-72532276 | None:intergenic | 35.0% | |
GCAAGACTCTAATTTATTGC+TGG | + | chr3.3:72532051-72532070 | None:intergenic | 35.0% | |
GCACATGCATGATAAATCAT+GGG | + | chr3.3:72531933-72531952 | None:intergenic | 35.0% | |
GCAGATTTATGAAACTTACG+AGG | - | chr3.3:72530989-72531008 | MS.gene75497:intron | 35.0% | |
GTTCAAAGGAATCATTGCTA+AGG | + | chr3.3:72531185-72531204 | None:intergenic | 35.0% | |
GTTTCAACTTTCAACCTTCT+TGG | - | chr3.3:72530067-72530086 | MS.gene75497:CDS | 35.0% | |
TAGGAGTTACTGAGATTTCA+GGG | - | chr3.3:72531796-72531815 | MS.gene75497:intron | 35.0% | |
TCAACCAATGTTCTTCAATC+TGG | - | chr3.3:72532621-72532640 | MS.gene75497:intron | 35.0% | |
TGACTATATTCTTGTCAGCA+TGG | + | chr3.3:72532916-72532935 | None:intergenic | 35.0% | |
TGAGTTTCAAACTCGTACTT+TGG | - | chr3.3:72530402-72530421 | MS.gene75497:CDS | 35.0% | |
TGCACATGCATGATAAATCA+TGG | + | chr3.3:72531934-72531953 | None:intergenic | 35.0% | |
TTACTTAAGGGAGTTAGAGT+TGG | + | chr3.3:72532203-72532222 | None:intergenic | 35.0% | |
TTCTGTCAAAACAGTCATGA+AGG | + | chr3.3:72533074-72533093 | None:intergenic | 35.0% | |
TTTGGAAGTTGGGAGAAAAT+GGG | - | chr3.3:72531591-72531610 | MS.gene75497:intron | 35.0% | |
! | AAATTCTTTTGCATCCTCTG+TGG | + | chr3.3:72532987-72533006 | None:intergenic | 35.0% |
! | AATTCTTTTGCATCCTCTGT+GGG | + | chr3.3:72532986-72533005 | None:intergenic | 35.0% |
! | ACATTGATGGGAAATGGATT+TGG | - | chr3.3:72531573-72531592 | MS.gene75497:intron | 35.0% |
! | GAGCAAGTATCTGTTACTTA+AGG | + | chr3.3:72532216-72532235 | None:intergenic | 35.0% |
! | GTATGTTGCTTAAACAAAGC+TGG | - | chr3.3:72531707-72531726 | MS.gene75497:intron | 35.0% |
! | GTTTTTGCCAATGGTTTCTT+TGG | - | chr3.3:72530774-72530793 | MS.gene75497:intron | 35.0% |
! | TCGATTTTGAATGTGGAGTT+GGG | + | chr3.3:72530204-72530223 | None:intergenic | 35.0% |
! | TGAATTAACCCATTTAGGGT+TGG | - | chr3.3:72530890-72530909 | MS.gene75497:intron | 35.0% |
! | TTACTGATTACTCACTTTGG+AGG | + | chr3.3:72531878-72531897 | None:intergenic | 35.0% |
! | TTCGATTTTGAATGTGGAGT+TGG | + | chr3.3:72530205-72530224 | None:intergenic | 35.0% |
!! | ATTTGGTTTGAAAAGTGGAG+TGG | + | chr3.3:72530151-72530170 | None:intergenic | 35.0% |
!! | GGCTGATTATTTTTCTGTCT+TGG | - | chr3.3:72532555-72532574 | MS.gene75497:intron | 35.0% |
!! | TGAATTAGCGGGTTTGAATT+TGG | + | chr3.3:72530168-72530187 | None:intergenic | 35.0% |
!! | TGTTGGTAGCATTTCTAACA+TGG | + | chr3.3:72531391-72531410 | None:intergenic | 35.0% |
ACTCATCCCAAAGAAACCAT+TGG | + | chr3.3:72530784-72530803 | None:intergenic | 40.0% | |
AGAAAGAAGAGAACCGTTCT+TGG | + | chr3.3:72530474-72530493 | None:intergenic | 40.0% | |
AGCAGTTAGGAAGACATTGA+TGG | - | chr3.3:72531560-72531579 | MS.gene75497:intron | 40.0% | |
AGGAAGACATTGATGGGAAA+TGG | - | chr3.3:72531567-72531586 | MS.gene75497:intron | 40.0% | |
AGGTAGGTTATAAGGATGTG+TGG | + | chr3.3:72532124-72532143 | None:intergenic | 40.0% | |
AGTGATTTATGACAGGTTGC+GGG | + | chr3.3:72530114-72530133 | None:intergenic | 40.0% | |
ATGTGTGGAGAGAACAATAG+GGG | + | chr3.3:72532109-72532128 | None:intergenic | 40.0% | |
ATTGGCAGAGGTAGGTTATA+AGG | + | chr3.3:72532132-72532151 | None:intergenic | 40.0% | |
CAATAGGGGATTCAGTTTAG+CGG | + | chr3.3:72532095-72532114 | None:intergenic | 40.0% | |
CAGTTACAAGTGCATACTAC+AGG | - | chr3.3:72532804-72532823 | MS.gene75497:CDS | 40.0% | |
CATGCATGATAAATCATGGG+TGG | + | chr3.3:72531930-72531949 | None:intergenic | 40.0% | |
CATTGTCAACAAGAAGAACC+TGG | - | chr3.3:72533102-72533121 | MS.gene75497:intron | 40.0% | |
CCCTACAAGTATTTCCTTTC+TGG | - | chr3.3:72532262-72532281 | MS.gene75497:intron | 40.0% | |
CTAGGAGTTACTGAGATTTC+AGG | - | chr3.3:72531795-72531814 | MS.gene75497:intron | 40.0% | |
CTCACCAGATTGAAGAACAT+TGG | + | chr3.3:72532628-72532647 | None:intergenic | 40.0% | |
GAAGATAGACTACGTCTTCA+AGG | - | chr3.3:72530282-72530301 | MS.gene75497:CDS | 40.0% | |
GACAACACATGCTCTTCTTA+GGG | + | chr3.3:72533210-72533229 | None:intergenic | 40.0% | |
GATGTGTGGAGAGAACAATA+GGG | + | chr3.3:72532110-72532129 | None:intergenic | 40.0% | |
GCAAGCAACTAATGTTGAGA+CGG | - | chr3.3:72533048-72533067 | MS.gene75497:intron | 40.0% | |
GCAGTTAGGAAGACATTGAT+GGG | - | chr3.3:72531561-72531580 | MS.gene75497:intron | 40.0% | |
GCCAGAAAGGAAATACTTGT+AGG | + | chr3.3:72532266-72532285 | None:intergenic | 40.0% | |
GCTGATAAGAATCAGGGAAA+TGG | - | chr3.3:72533127-72533146 | MS.gene75497:intron | 40.0% | |
GGCAAGAAGATTATTGTTCC+TGG | - | chr3.3:72533169-72533188 | MS.gene75497:intron | 40.0% | |
GGGTCAGAAAGTAAGAAGAA+CGG | - | chr3.3:72531728-72531747 | MS.gene75497:intron | 40.0% | |
GGTCAGAAAGTAAGAAGAAC+GGG | - | chr3.3:72531729-72531748 | MS.gene75497:intron | 40.0% | |
GTAGTTGTGTTTAGAGGGAA+AGG | + | chr3.3:72532073-72532092 | None:intergenic | 40.0% | |
GTATGCATTCGACATGAATG+AGG | + | chr3.3:72531256-72531275 | None:intergenic | 40.0% | |
GTGGACTCAAAAGCTACAAT+CGG | - | chr3.3:72530376-72530395 | MS.gene75497:CDS | 40.0% | |
GTTACAAGTGCATACTACAG+GGG | - | chr3.3:72532806-72532825 | MS.gene75497:CDS | 40.0% | |
GTTGGATTTCATACGTCACA+AGG | - | chr3.3:72531516-72531535 | MS.gene75497:intron | 40.0% | |
TAGCGGTAGTTGTGTTTAGA+GGG | + | chr3.3:72532078-72532097 | None:intergenic | 40.0% | |
TCGGCATATTTGAACTTCAG+TGG | - | chr3.3:72531081-72531100 | MS.gene75497:intron | 40.0% | |
TGAAGACGTAGTCTATCTTC+TGG | + | chr3.3:72530282-72530301 | None:intergenic | 40.0% | |
TGACAACACATGCTCTTCTT+AGG | + | chr3.3:72533211-72533230 | None:intergenic | 40.0% | |
TTAGCGGTAGTTGTGTTTAG+AGG | + | chr3.3:72532079-72532098 | None:intergenic | 40.0% | |
TTCTTAGGGATTTCTTGTGC+AGG | + | chr3.3:72533196-72533215 | None:intergenic | 40.0% | |
! | GGGAAATGGATTTGGAAGTT+GGG | - | chr3.3:72531581-72531600 | MS.gene75497:intron | 40.0% |
! | TGGGAAATGGATTTGGAAGT+TGG | - | chr3.3:72531580-72531599 | MS.gene75497:intron | 40.0% |
!! | GTCTTCAAGGTGGTTCTAAT+CGG | - | chr3.3:72530295-72530314 | MS.gene75497:CDS | 40.0% |
AACCCAAGCCAACCCTAAAT+GGG | + | chr3.3:72530901-72530920 | None:intergenic | 45.0% | |
ACTTGAATGACACGTGTGGT+TGG | - | chr3.3:72531498-72531517 | MS.gene75497:intron | 45.0% | |
AGATAGCACTCTCACAGGAT+TGG | + | chr3.3:72532150-72532169 | None:intergenic | 45.0% | |
AGGTTGAAAGTTGAAACCGG+AGG | + | chr3.3:72530064-72530083 | None:intergenic | 45.0% | |
AGTTTGAGTGTGTATGAGCG+AGG | - | chr3.3:72530801-72530820 | MS.gene75497:intron | 45.0% | |
CAGTGAGTTGCTCACAATAG+AGG | - | chr3.3:72532017-72532036 | MS.gene75497:intron | 45.0% | |
CATACTGCCTGACTTAACTC+AGG | - | chr3.3:72531271-72531290 | MS.gene75497:intron | 45.0% | |
CATGTCACCTGAGTTAAGTC+AGG | + | chr3.3:72531281-72531300 | None:intergenic | 45.0% | |
CGCAGTTCTTCTAACCATCT+AGG | + | chr3.3:72532890-72532909 | None:intergenic | 45.0% | |
CTAATCGGTGATTCTGCAGT+CGG | - | chr3.3:72530310-72530329 | MS.gene75497:CDS | 45.0% | |
CTAGGTATGTGATCGAAGCT+CGG | + | chr3.3:72532872-72532891 | None:intergenic | 45.0% | |
CTCAGTAACTCCTAGCTGTT+GGG | + | chr3.3:72531790-72531809 | None:intergenic | 45.0% | |
CTGGCTGCTGATAAGAATCA+GGG | - | chr3.3:72533121-72533140 | MS.gene75497:intron | 45.0% | |
GAGTGTTAAGGCTCAGATCT+GGG | - | chr3.3:72530438-72530457 | MS.gene75497:intron | 45.0% | |
GATAGACTACGTCTTCAAGG+TGG | - | chr3.3:72530285-72530304 | MS.gene75497:CDS | 45.0% | |
GCTGCATGAGTTGTACACTA+AGG | + | chr3.3:72532375-72532394 | None:intergenic | 45.0% | |
GCTGTGTGCTTACAGACATT+GGG | - | chr3.3:72532284-72532303 | MS.gene75497:intron | 45.0% | |
GCTTCGATCACATACCTAGA+TGG | - | chr3.3:72532873-72532892 | MS.gene75497:CDS | 45.0% | |
GGATGTGTGGAGAGAACAAT+AGG | + | chr3.3:72532111-72532130 | None:intergenic | 45.0% | |
GTAACAGATACTTGCTCAGC+TGG | - | chr3.3:72532219-72532238 | MS.gene75497:intron | 45.0% | |
TCTCAGTAACTCCTAGCTGT+TGG | + | chr3.3:72531791-72531810 | None:intergenic | 45.0% | |
TGTGAGCAACTCACTGTAGA+GGG | + | chr3.3:72532013-72532032 | None:intergenic | 45.0% | |
TTGTGAGCAACTCACTGTAG+AGG | + | chr3.3:72532014-72532033 | None:intergenic | 45.0% | |
! | AGAGTGTTAAGGCTCAGATC+TGG | - | chr3.3:72530437-72530456 | MS.gene75497:intron | 45.0% |
!! | AACCCATTTAGGGTTGGCTT+GGG | - | chr3.3:72530896-72530915 | MS.gene75497:intron | 45.0% |
!! | AATCCTGTGAGAGTGCTATC+TGG | - | chr3.3:72532149-72532168 | MS.gene75497:intron | 45.0% |
!! | GTTTGACTGATGTTGACTCG+AGG | - | chr3.3:72530701-72530720 | MS.gene75497:intron | 45.0% |
!! | TAACCCATTTAGGGTTGGCT+TGG | - | chr3.3:72530895-72530914 | MS.gene75497:intron | 45.0% |
!!! | TTTTTTTTTTTTTTTTAACT+CGG | + | chr3.3:72530020-72530039 | None:intergenic | 5.0% |
ACAATGGCGAGTGCAGGTTA+CGG | - | chr3.3:72530247-72530266 | MS.gene75497:CDS | 50.0% | |
AGACCAGATAGCACTCTCAC+AGG | + | chr3.3:72532155-72532174 | None:intergenic | 50.0% | |
AGCGATACAGACTGCAGAGT+AGG | + | chr3.3:72531647-72531666 | None:intergenic | 50.0% | |
AGTAACTCCTAGCTGTTGGG+AGG | + | chr3.3:72531787-72531806 | None:intergenic | 50.0% | |
ATTAGTTGCTTGCAGCGCAG+AGG | + | chr3.3:72533041-72533060 | None:intergenic | 50.0% | |
CATAACTCCTCCCAACAGCT+AGG | - | chr3.3:72531777-72531796 | MS.gene75497:intron | 50.0% | |
CCTGATTCTTATCAGCAGCC+AGG | + | chr3.3:72533123-72533142 | None:intergenic | 50.0% | |
CCTGGCTGCTGATAAGAATC+AGG | - | chr3.3:72533120-72533139 | MS.gene75497:intron | 50.0% | |
CTGTAAGCACACAGCCAGAA+AGG | + | chr3.3:72532279-72532298 | None:intergenic | 50.0% | |
GAACCCAAGCCAACCCTAAA+TGG | + | chr3.3:72530902-72530921 | None:intergenic | 50.0% | |
GACAGGTTGCGGGTGATTAT+TGG | + | chr3.3:72530104-72530123 | None:intergenic | 50.0% | |
GGCTGTGTGCTTACAGACAT+TGG | - | chr3.3:72532283-72532302 | MS.gene75497:intron | 50.0% | |
GGGAGAAATGGGTGAGTGTT+TGG | + | chr3.3:72532245-72532264 | None:intergenic | 50.0% | |
GGTTGCGGGTGATTATTGGT+TGG | + | chr3.3:72530100-72530119 | None:intergenic | 50.0% | |
TGCAAGAAACGACTTCAGCG+TGG | - | chr3.3:72530357-72530376 | MS.gene75497:CDS | 50.0% | |
! | CGGGTGATTATTGGTTGGTG+GGG | + | chr3.3:72530095-72530114 | None:intergenic | 50.0% |
! | GCGGGTGATTATTGGTTGGT+GGG | + | chr3.3:72530096-72530115 | None:intergenic | 50.0% |
! | TGCGGGTGATTATTGGTTGG+TGG | + | chr3.3:72530097-72530116 | None:intergenic | 50.0% |
!! | GACTGATGTTGACTCGAGGT+TGG | - | chr3.3:72530705-72530724 | MS.gene75497:intron | 50.0% |
!! | TTAGGGTTGGCTTGGGTTCT+TGG | - | chr3.3:72530903-72530922 | MS.gene75497:intron | 50.0% |
GCAAGAACAATGGCGAGTGC+AGG | - | chr3.3:72530241-72530260 | MS.gene75497:CDS | 55.0% | |
GGCAACTCAGCATCTCTGTC+CGG | - | chr3.3:72533148-72533167 | MS.gene75497:intron | 55.0% | |
GGGATTTCTTGTGCAGGACC+AGG | + | chr3.3:72533190-72533209 | None:intergenic | 55.0% | |
GTGATCGAAGCTCGGACGTT+TGG | + | chr3.3:72532864-72532883 | None:intergenic | 55.0% | |
! | CACTCTCACAGGATTGGCAG+AGG | + | chr3.3:72532144-72532163 | None:intergenic | 55.0% |
! | CTCACAGGATTGGCAGAGGT+AGG | + | chr3.3:72532140-72532159 | None:intergenic | 55.0% |
!! | ATACTACAGGGGCGCTGTTG+GGG | - | chr3.3:72532817-72532836 | MS.gene75497:CDS | 55.0% |
!! | CATACTACAGGGGCGCTGTT+GGG | - | chr3.3:72532816-72532835 | MS.gene75497:CDS | 55.0% |
GAGCGAGGTGTGATTGACGC+AGG | - | chr3.3:72530816-72530835 | MS.gene75497:intron | 60.0% | |
GGGACACTGCTGGCCAAGAA+CGG | - | chr3.3:72530458-72530477 | MS.gene75497:intron | 60.0% | |
! | GCTCAGATCTGGGACACTGC+TGG | - | chr3.3:72530448-72530467 | MS.gene75497:intron | 60.0% |
!! | GCATACTACAGGGGCGCTGT+TGG | - | chr3.3:72532815-72532834 | MS.gene75497:CDS | 60.0% |
!! | TGGTTGGTGGGGTCCCAAGA+AGG | + | chr3.3:72530084-72530103 | None:intergenic | 60.0% |
GCAGCGTGCAGTACCCACAG+AGG | - | chr3.3:72532970-72532989 | MS.gene75497:intron | 65.0% | |
! | GGGCGCTGTTGGGGCAATGT+TGG | - | chr3.3:72532826-72532845 | MS.gene75497:CDS | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 72530011 | 72533234 | 72530011 | ID=MS.gene75497 |
chr3.3 | mRNA | 72530011 | 72533234 | 72530011 | ID=MS.gene75497.t1;Parent=MS.gene75497 |
chr3.3 | exon | 72533231 | 72533234 | 72533231 | ID=MS.gene75497.t1.exon1;Parent=MS.gene75497.t1 |
chr3.3 | CDS | 72533231 | 72533234 | 72533231 | ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1 |
chr3.3 | exon | 72532766 | 72532982 | 72532766 | ID=MS.gene75497.t1.exon2;Parent=MS.gene75497.t1 |
chr3.3 | CDS | 72532766 | 72532982 | 72532766 | ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1 |
chr3.3 | exon | 72530011 | 72530449 | 72530011 | ID=MS.gene75497.t1.exon3;Parent=MS.gene75497.t1 |
chr3.3 | CDS | 72530011 | 72530449 | 72530011 | ID=cds.MS.gene75497.t1;Parent=MS.gene75497.t1 |
Gene Sequence |
Protein sequence |