Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005636.t1 | RHN82196.1 | 68.9 | 363 | 96 | 8 | 117 | 466 | 8 | 366 | 2.60E-124 | 455.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005636.t1 | A0A396JV43 | 68.9 | 363 | 96 | 8 | 117 | 466 | 8 | 366 | 1.9e-124 | 455.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005636.t1 | MTR_3g045700 | 69.209 | 354 | 95 | 8 | 122 | 466 | 2 | 350 | 1.59e-156 | 447 |
| MS.gene005636.t1 | MTR_7g083950 | 60.945 | 402 | 127 | 14 | 77 | 466 | 49 | 432 | 5.74e-147 | 426 |
| MS.gene005636.t1 | MTR_4g133490 | 62.784 | 352 | 117 | 6 | 124 | 466 | 2 | 348 | 3.28e-132 | 386 |
| MS.gene005636.t1 | MTR_3g006010 | 58.757 | 354 | 136 | 5 | 118 | 463 | 115 | 466 | 1.14e-131 | 389 |
| MS.gene005636.t1 | MTR_3g006120 | 58.857 | 350 | 130 | 6 | 124 | 463 | 4 | 349 | 1.02e-128 | 377 |
| MS.gene005636.t1 | MTR_3g006100 | 58.120 | 351 | 137 | 5 | 124 | 466 | 4 | 352 | 3.87e-128 | 375 |
| MS.gene005636.t1 | MTR_1g100280 | 60.221 | 362 | 98 | 11 | 119 | 466 | 8 | 337 | 1.52e-121 | 358 |
| MS.gene005636.t1 | MTR_3g006140 | 55.125 | 361 | 152 | 5 | 113 | 465 | 15 | 373 | 2.43e-121 | 359 |
| MS.gene005636.t1 | MTR_3g006180 | 57.941 | 340 | 133 | 5 | 134 | 465 | 1 | 338 | 4.06e-120 | 355 |
| MS.gene005636.t1 | MTR_6g092140 | 53.908 | 371 | 148 | 8 | 113 | 466 | 91 | 455 | 4.39e-117 | 351 |
| MS.gene005636.t1 | MTR_6g091830 | 53.908 | 371 | 148 | 8 | 113 | 466 | 91 | 455 | 5.63e-117 | 351 |
| MS.gene005636.t1 | MTR_1g109340 | 70.916 | 251 | 67 | 3 | 219 | 465 | 106 | 354 | 4.09e-113 | 337 |
| MS.gene005636.t1 | MTR_1g109340 | 78.571 | 42 | 9 | 0 | 118 | 159 | 65 | 106 | 1.26e-14 | 75.5 |
| MS.gene005636.t1 | MTR_7g070100 | 54.728 | 349 | 148 | 3 | 125 | 466 | 5 | 350 | 5.21e-111 | 332 |
| MS.gene005636.t1 | MTR_3g068220 | 52.646 | 359 | 149 | 7 | 122 | 464 | 2 | 355 | 5.27e-110 | 330 |
| MS.gene005636.t1 | MTR_4g133320 | 60.450 | 311 | 112 | 5 | 162 | 466 | 3 | 308 | 4.03e-107 | 320 |
| MS.gene005636.t1 | MTR_6g088340 | 41.761 | 443 | 206 | 10 | 39 | 466 | 28 | 433 | 4.47e-91 | 283 |
| MS.gene005636.t1 | MTR_3g085910 | 47.692 | 325 | 104 | 7 | 123 | 432 | 2 | 275 | 2.04e-81 | 253 |
| MS.gene005636.t1 | MTR_1g089085 | 77.632 | 152 | 32 | 2 | 109 | 259 | 25 | 175 | 7.57e-76 | 235 |
| MS.gene005636.t1 | MTR_1g089085 | 80.000 | 35 | 7 | 0 | 7 | 41 | 1 | 35 | 6.93e-11 | 61.6 |
| MS.gene005636.t1 | MTR_6g011110 | 49.462 | 279 | 121 | 5 | 202 | 466 | 5 | 277 | 7.99e-75 | 236 |
| MS.gene005636.t1 | MTR_3g086480 | 52.124 | 259 | 112 | 6 | 205 | 458 | 2 | 253 | 1.61e-72 | 229 |
| MS.gene005636.t1 | MTR_1g109520 | 69.375 | 160 | 39 | 3 | 314 | 465 | 19 | 176 | 1.43e-65 | 209 |
| MS.gene005636.t1 | MTR_1g089620 | 81.897 | 116 | 19 | 1 | 296 | 411 | 35 | 148 | 1.15e-56 | 189 |
| MS.gene005636.t1 | MTR_1g012330 | 65.468 | 139 | 47 | 1 | 199 | 336 | 2 | 140 | 4.89e-49 | 168 |
| MS.gene005636.t1 | MTR_1g109090 | 60.448 | 134 | 48 | 3 | 118 | 246 | 10 | 143 | 8.86e-40 | 140 |
| MS.gene005636.t1 | MTR_6g023220 | 30.606 | 330 | 213 | 9 | 129 | 451 | 18 | 338 | 2.19e-33 | 129 |
| MS.gene005636.t1 | MTR_1g106050 | 64.646 | 99 | 31 | 2 | 124 | 218 | 2 | 100 | 4.81e-32 | 119 |
| MS.gene005636.t1 | MTR_6g017130 | 70.000 | 80 | 24 | 0 | 6 | 85 | 1 | 80 | 3.87e-28 | 115 |
| MS.gene005636.t1 | MTR_6g017130 | 73.333 | 60 | 16 | 0 | 26 | 85 | 149 | 208 | 4.05e-21 | 95.5 |
| MS.gene005636.t1 | MTR_6g017130 | 52.381 | 84 | 40 | 0 | 26 | 109 | 85 | 168 | 6.04e-17 | 82.8 |
| MS.gene005636.t1 | MTR_1g093300 | 62.245 | 98 | 36 | 1 | 292 | 388 | 1 | 98 | 3.88e-28 | 108 |
| MS.gene005636.t1 | MTR_6g091850 | 46.602 | 103 | 44 | 3 | 373 | 466 | 1 | 101 | 3.74e-21 | 88.6 |
| MS.gene005636.t1 | MTR_0128s0040 | 40.602 | 133 | 75 | 2 | 153 | 282 | 3 | 134 | 1.06e-17 | 80.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 0 sgRNAs with CRISPR-Local
Find 173 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTAAGTATATGTTAATTTA+GGG | - | 8683:31979-31998 | MS.gene005636:intron | 10.0% |
| !! | TATTAAGTATATGTTAATTT+AGG | - | 8683:31978-31997 | MS.gene005636:intron | 10.0% |
| !!! | AAAAATAGATTTTTTTTTAG+AGG | - | 8683:30978-30997 | MS.gene005636:CDS | 10.0% |
| !!! | TAATTTTAAAAGTAATACTT+TGG | + | 8683:31528-31547 | None:intergenic | 10.0% |
| !!! | TTTTAAAAATTTGTAACAAA+CGG | + | 8683:30893-30912 | None:intergenic | 10.0% |
| !! | AAATTAACCAATAGTTAATA+AGG | - | 8683:31542-31561 | MS.gene005636:intron | 15.0% |
| !! | AAATTATCCTTATTAACTAT+TGG | + | 8683:31552-31571 | None:intergenic | 15.0% |
| !! | AATAGTTAATAAGGATAATT+TGG | - | 8683:31551-31570 | MS.gene005636:intron | 15.0% |
| !! | TTAAGTATATGTTAATTTAG+GGG | - | 8683:31980-31999 | MS.gene005636:intron | 15.0% |
| !!! | AATAAATAATCTAGTTTGTT+TGG | + | 8683:31072-31091 | None:intergenic | 15.0% |
| !!! | CATTTTGAAACAATTTTTTT+TGG | + | 8683:31425-31444 | None:intergenic | 15.0% |
| !!! | TAAAAAAGTGATTTTTACTA+CGG | - | 8683:31093-31112 | MS.gene005636:CDS | 15.0% |
| !! | AAAATTAATACTAGTGATCT+TGG | - | 8683:31765-31784 | MS.gene005636:intron | 20.0% |
| !! | AACTAAAGCTAAAACATAAA+GGG | + | 8683:31224-31243 | None:intergenic | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | 8683:31465-31484 | None:intergenic | 20.0% |
| !! | CTTAAAAAAGCTATAACAAA+CGG | + | 8683:30818-30837 | None:intergenic | 20.0% |
| !! | TTAAAAAAGCTATAACAAAC+GGG | + | 8683:30817-30836 | None:intergenic | 20.0% |
| !! | TTGGATACAACTATATAAAA+GGG | + | 8683:31053-31072 | None:intergenic | 20.0% |
| !! | TTTGGATACAACTATATAAA+AGG | + | 8683:31054-31073 | None:intergenic | 20.0% |
| !!! | AACATTGCATTATTTTATGT+TGG | - | 8683:32973-32992 | MS.gene005636:intron | 20.0% |
| !!! | ACATTGCATTATTTTATGTT+GGG | - | 8683:32974-32993 | MS.gene005636:intron | 20.0% |
| !!! | TTATTTTAATCCGTAACAAA+CGG | - | 8683:31197-31216 | MS.gene005636:CDS | 20.0% |
| !!! | TTTTATTGTTGTGATCTAAA+GGG | - | 8683:32158-32177 | MS.gene005636:intron | 20.0% |
| ! | AAGAAAAAATATGGCTATGA+AGG | - | 8683:30647-30666 | MS.gene005636:CDS | 25.0% |
| ! | ACTGGTCAAAAGAAAAAATA+TGG | - | 8683:30638-30657 | MS.gene005636:CDS | 25.0% |
| ! | AGAAAAAATATGGCTATGAA+GGG | - | 8683:30648-30667 | MS.gene005636:CDS | 25.0% |
| ! | ATGAAGAAAAATTGTTTGGT+CGG | - | 8683:30544-30563 | MS.gene005636:CDS | 25.0% |
| ! | ATTGTCCTTAATAGATGATA+TGG | + | 8683:31710-31729 | None:intergenic | 25.0% |
| ! | CAACTAAAGCTAAAACATAA+AGG | + | 8683:31225-31244 | None:intergenic | 25.0% |
| ! | TACTAATCAATCCATTTACA+AGG | - | 8683:32500-32519 | MS.gene005636:intron | 25.0% |
| ! | TTGTCCTTAATAGATGATAT+GGG | + | 8683:31709-31728 | None:intergenic | 25.0% |
| !! | TACGTGATATTGATGAATTT+TGG | - | 8683:31265-31284 | MS.gene005636:CDS | 25.0% |
| !! | TTCTAGCAGATATTTTATCA+TGG | - | 8683:32456-32475 | MS.gene005636:intron | 25.0% |
| !! | TTTTAGACATCTACAATATG+AGG | - | 8683:33182-33201 | MS.gene005636:CDS | 25.0% |
| !!! | GGCAAGAAATTTTTTTAGAA+GGG | - | 8683:30590-30609 | MS.gene005636:CDS | 25.0% |
| !!! | GTTTTATTGTTGTGATCTAA+AGG | - | 8683:32157-32176 | MS.gene005636:intron | 25.0% |
| !!! | TATTTTAATCCGTAACAAAC+GGG | - | 8683:31198-31217 | MS.gene005636:CDS | 25.0% |
| AACCATGAATTATGTCAAAC+TGG | - | 8683:32939-32958 | MS.gene005636:intron | 30.0% | |
| AATATATGTTGTCACTGACA+AGG | - | 8683:32747-32766 | MS.gene005636:intron | 30.0% | |
| ACCTTCTTTATCCTTGTAAA+TGG | + | 8683:32514-32533 | None:intergenic | 30.0% | |
| AGCATATACAAAGTGAAGAT+GGG | - | 8683:32010-32029 | MS.gene005636:intron | 30.0% | |
| AGGGATGAAGAAAAATTGTT+TGG | - | 8683:30540-30559 | MS.gene005636:CDS | 30.0% | |
| ATTCTACAATGGGAAATCTA+GGG | - | 8683:32692-32711 | MS.gene005636:intron | 30.0% | |
| ATTGCAAGCGACATATAATT+TGG | + | 8683:31351-31370 | None:intergenic | 30.0% | |
| ATTTGTCGTGCAATAAAATG+AGG | - | 8683:32893-32912 | MS.gene005636:intron | 30.0% | |
| CCAAAAATTGGATACAATTG+TGG | - | 8683:30432-30451 | MS.gene005636:CDS | 30.0% | |
| CTTTCCCATATCATCTATTA+AGG | - | 8683:31702-31721 | MS.gene005636:intron | 30.0% | |
| GAAATCAGGAATAACTTCAA+AGG | + | 8683:32551-32570 | None:intergenic | 30.0% | |
| GAGGAAGTTAATCCAAAAAT+TGG | - | 8683:30420-30439 | MS.gene005636:CDS | 30.0% | |
| GGAAAGACAAAAAGAGTTAA+TGG | - | 8683:30611-30630 | MS.gene005636:CDS | 30.0% | |
| TACAAGACTTGAAGAAGTAA+CGG | + | 8683:32340-32359 | None:intergenic | 30.0% | |
| TAGCATATACAAAGTGAAGA+TGG | - | 8683:32009-32028 | MS.gene005636:intron | 30.0% | |
| TATACTTGTCAGACTATGTA+CGG | + | 8683:31887-31906 | None:intergenic | 30.0% | |
| TATTCTACAATGGGAAATCT+AGG | - | 8683:32691-32710 | MS.gene005636:intron | 30.0% | |
| TCCATTTACAAGGATAAAGA+AGG | - | 8683:32510-32529 | MS.gene005636:intron | 30.0% | |
| TGAAGAAAAATTGTTTGGTC+GGG | - | 8683:30545-30564 | MS.gene005636:CDS | 30.0% | |
| TGCTTTCATTCAAAAGTTCT+AGG | - | 8683:32626-32645 | MS.gene005636:intron | 30.0% | |
| TTATGTCAAACTGGAAACTT+TGG | - | 8683:32948-32967 | MS.gene005636:intron | 30.0% | |
| TTCCAGTTTGACATAATTCA+TGG | + | 8683:32944-32963 | None:intergenic | 30.0% | |
| TTGCAAGCGACATATAATTT+GGG | + | 8683:31350-31369 | None:intergenic | 30.0% | |
| ! | AAGGAATAAATCTTTTGCTC+GGG | + | 8683:32397-32416 | None:intergenic | 30.0% |
| ! | CAAGGAATAAATCTTTTGCT+CGG | + | 8683:32398-32417 | None:intergenic | 30.0% |
| ! | CCACAATTGTATCCAATTTT+TGG | + | 8683:30435-30454 | None:intergenic | 30.0% |
| ! | TGAAAGATTGATGACATACA+CGG | + | 8683:33055-33074 | None:intergenic | 30.0% |
| ! | TTGTTTAATCATGCGGTTTT+GGG | + | 8683:30394-30413 | None:intergenic | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | 8683:31634-31653 | MS.gene005636:intron | 30.0% |
| !! | AGAGGTGTTCTTTATAATCT+CGG | + | 8683:30724-30743 | None:intergenic | 30.0% |
| !!! | GGGCAAGAAATTTTTTTAGA+AGG | - | 8683:30589-30608 | MS.gene005636:CDS | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | 8683:31633-31652 | None:intergenic | 30.0% |
| AAAAGAGTTAATGGAGTCAC+TGG | - | 8683:30620-30639 | MS.gene005636:CDS | 35.0% | |
| AACATAGACATAGCTGTTGA+AGG | + | 8683:32431-32450 | None:intergenic | 35.0% | |
| AACTTCCTTGTACCTTAGAT+TGG | - | 8683:32840-32859 | MS.gene005636:CDS | 35.0% | |
| AAGGTACAAGGAAGTTATGT+CGG | + | 8683:32836-32855 | None:intergenic | 35.0% | |
| ACAATGTAGTGTGTATTCAG+AGG | - | 8683:33086-33105 | MS.gene005636:CDS | 35.0% | |
| AGGAATAACTTCAAAGGTAG+AGG | + | 8683:32545-32564 | None:intergenic | 35.0% | |
| CATGATTAAACAACAGTCTG+AGG | - | 8683:30401-30420 | MS.gene005636:CDS | 35.0% | |
| GACATTGTGATTCTCAACTA+TGG | - | 8683:30783-30802 | MS.gene005636:CDS | 35.0% | |
| GCAAAAATGTATTACGCTTC+CGG | - | 8683:33122-33141 | MS.gene005636:CDS | 35.0% | |
| GCATGGTTATGAAAGAAATC+AGG | + | 8683:32565-32584 | None:intergenic | 35.0% | |
| GTGAGTACTTAATGCTTCAT+TGG | + | 8683:31375-31394 | None:intergenic | 35.0% | |
| GTTGTGATCTAAAGGGAAAA+AGG | - | 8683:32165-32184 | MS.gene005636:intron | 35.0% | |
| TGGGTTGCTTATTCTACAAT+GGG | - | 8683:32682-32701 | MS.gene005636:intron | 35.0% | |
| ! | AGCAGATATTTTATCATGGC+AGG | - | 8683:32460-32479 | MS.gene005636:intron | 35.0% |
| ! | CAGACTGTTGTTTAATCATG+CGG | + | 8683:30401-30420 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | 8683:31503-31522 | None:intergenic | 35.0% |
| ! | GTTAACCAATCTAAGGTACA+AGG | + | 8683:32848-32867 | None:intergenic | 35.0% |
| ! | GTTGTTTAATCATGCGGTTT+TGG | + | 8683:30395-30414 | None:intergenic | 35.0% |
| ! | TCAAGTCTTGTATGATCGTA+AGG | - | 8683:32348-32367 | MS.gene005636:intron | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | 8683:31499-31518 | None:intergenic | 35.0% |
| ! | TGTTTAATCATGCGGTTTTG+GGG | + | 8683:30393-30412 | None:intergenic | 35.0% |
| ! | TTGGGTTGCTTATTCTACAA+TGG | - | 8683:32681-32700 | MS.gene005636:intron | 35.0% |
| !! | AAGCGACACACATTTTGAAA+CGG | + | 8683:31399-31418 | None:intergenic | 35.0% |
| !! | ATGCTCTGAAGAATTTGTCT+TGG | - | 8683:32603-32622 | MS.gene005636:intron | 35.0% |
| !!! | CCAGCTTTTTTCATCTAAGA+GGG | + | 8683:30496-30515 | None:intergenic | 35.0% |
| !!! | TCCAGCTTTTTTCATCTAAG+AGG | + | 8683:30497-30516 | None:intergenic | 35.0% |
| AAAGCTGGAAAGACGTCAAT+TGG | - | 8683:30508-30527 | MS.gene005636:CDS | 40.0% | |
| AAAGTGAAGATGGGAAGATG+GGG | - | 8683:32019-32038 | MS.gene005636:intron | 40.0% | |
| AAGCTTCGGTAAGAGTTTCT+TGG | + | 8683:30695-30714 | None:intergenic | 40.0% | |
| ACAAAGTGAAGATGGGAAGA+TGG | - | 8683:32017-32036 | MS.gene005636:intron | 40.0% | |
| ACCTCTTCTGATCTAGAAGT+AGG | - | 8683:30738-30757 | MS.gene005636:CDS | 40.0% | |
| ACGTCAATTGGAAAGACATC+AGG | - | 8683:30520-30539 | MS.gene005636:CDS | 40.0% | |
| ACTATGTACGGTAATGACTG+GGG | + | 8683:31875-31894 | None:intergenic | 40.0% | |
| AGACTATGTACGGTAATGAC+TGG | + | 8683:31877-31896 | None:intergenic | 40.0% | |
| AGGTACAAGGAAGTTATGTC+GGG | + | 8683:32835-32854 | None:intergenic | 40.0% | |
| ATCTGTGTGCAAGAATTGGA+GGG | - | 8683:32279-32298 | MS.gene005636:intron | 40.0% | |
| ATGGTAGAAAATGTTCCACG+AGG | + | 8683:33150-33169 | None:intergenic | 40.0% | |
| ATTGAGCAACCCTAATAGGT+GGG | - | 8683:33014-33033 | MS.gene005636:CDS | 40.0% | |
| ATTTGAAAGCGATTCAGGTG+AGG | - | 8683:30568-30587 | MS.gene005636:CDS | 40.0% | |
| CAAAGTGAAGATGGGAAGAT+GGG | - | 8683:32018-32037 | MS.gene005636:intron | 40.0% | |
| CACAATGTCCTAGTTACCTT+GGG | + | 8683:30772-30791 | None:intergenic | 40.0% | |
| CATCGCAGTTAACCAATCTA+AGG | + | 8683:32855-32874 | None:intergenic | 40.0% | |
| CCCTCTTAGATGAAAAAAGC+TGG | - | 8683:30493-30512 | MS.gene005636:CDS | 40.0% | |
| CGTCAATTGGAAAGACATCA+GGG | - | 8683:30521-30540 | MS.gene005636:CDS | 40.0% | |
| GACTATGTACGGTAATGACT+GGG | + | 8683:31876-31895 | None:intergenic | 40.0% | |
| GATACAATTGTGGTAAGCGT+TGG | - | 8683:30442-30461 | MS.gene005636:CDS | 40.0% | |
| GCATTTGCAAAAAGCAAGCA+AGG | + | 8683:32587-32606 | None:intergenic | 40.0% | |
| GGTGTTCTTTATAATCTCGG+TGG | + | 8683:30721-30740 | None:intergenic | 40.0% | |
| GTTGAAGGTCTTCATCTTCA+AGG | + | 8683:32416-32435 | None:intergenic | 40.0% | |
| TAAAGGGAAAAAGGCGAAGA+AGG | - | 8683:32174-32193 | MS.gene005636:intron | 40.0% | |
| TACAATGGGAAATCTAGGGA+GGG | - | 8683:32696-32715 | MS.gene005636:intron | 40.0% | |
| TCACAATGTCCTAGTTACCT+TGG | + | 8683:30773-30792 | None:intergenic | 40.0% | |
| TCCAAAGCGACATGCAATTT+GGG | + | 8683:31317-31336 | None:intergenic | 40.0% | |
| TCTCATATCCCCACCTATTA+GGG | + | 8683:33026-33045 | None:intergenic | 40.0% | |
| TGTAGTGTGTATTCAGAGGA+TGG | - | 8683:33090-33109 | MS.gene005636:CDS | 40.0% | |
| TTCCAAAGCGACATGCAATT+TGG | + | 8683:31318-31337 | None:intergenic | 40.0% | |
| TTGCATCTGTGTGCAAGAAT+TGG | - | 8683:32275-32294 | MS.gene005636:intron | 40.0% | |
| TTTGAAAGCGATTCAGGTGA+GGG | - | 8683:30569-30588 | MS.gene005636:CDS | 40.0% | |
| ! | AGAATTGGAGGGCTTTTGAT+TGG | - | 8683:32290-32309 | MS.gene005636:intron | 40.0% |
| ! | CATTTTCTACCATGCTGGAT+TGG | - | 8683:33157-33176 | MS.gene005636:CDS | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | 8683:31500-31519 | None:intergenic | 40.0% |
| ! | TAACTGCGATGAGCAACTTT+TGG | - | 8683:32864-32883 | MS.gene005636:CDS | 40.0% |
| ! | TCTAAAACACCAATCCAGCA+TGG | + | 8683:33169-33188 | None:intergenic | 40.0% |
| ! | TGGAACATTTTCTACCATGC+TGG | - | 8683:33152-33171 | MS.gene005636:CDS | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | - | 8683:31638-31657 | MS.gene005636:intron | 40.0% |
| AAAAAGGCGAAGAAGGTAGC+AGG | - | 8683:32181-32200 | MS.gene005636:intron | 45.0% | |
| AAAAGGCGAAGAAGGTAGCA+GGG | - | 8683:32182-32201 | MS.gene005636:intron | 45.0% | |
| AAGCGACATGCAATTTGGGA+CGG | + | 8683:31313-31332 | None:intergenic | 45.0% | |
| AATCTCGGTGGCAAAAGCTT+CGG | + | 8683:30709-30728 | None:intergenic | 45.0% | |
| ACCAATCTCGAAATCGTGGT+TGG | - | 8683:32662-32681 | MS.gene005636:intron | 45.0% | |
| ACGCATTGAGCAACCCTAAT+AGG | - | 8683:33010-33029 | MS.gene005636:CDS | 45.0% | |
| AGGGAACTGTGAACTTCCTT+GGG | - | 8683:32201-32220 | MS.gene005636:intron | 45.0% | |
| ATGACATCAAGCACATCCCA+AGG | + | 8683:32220-32239 | None:intergenic | 45.0% | |
| CATCTGTGTGCAAGAATTGG+AGG | - | 8683:32278-32297 | MS.gene005636:intron | 45.0% | |
| CATTGAGCAACCCTAATAGG+TGG | - | 8683:33013-33032 | MS.gene005636:CDS | 45.0% | |
| CCAATCTCGAAATCGTGGTT+GGG | - | 8683:32663-32682 | MS.gene005636:intron | 45.0% | |
| CTACAATGGGAAATCTAGGG+AGG | - | 8683:32695-32714 | MS.gene005636:intron | 45.0% | |
| CTCTCATATCCCCACCTATT+AGG | + | 8683:33027-33046 | None:intergenic | 45.0% | |
| GCCTACTTCTAGATCAGAAG+AGG | + | 8683:30742-30761 | None:intergenic | 45.0% | |
| GTAATGACTGGGGTAATGAC+TGG | + | 8683:31865-31884 | None:intergenic | 45.0% | |
| GTCTACCAATCTCGAAATCG+TGG | - | 8683:32658-32677 | MS.gene005636:intron | 45.0% | |
| TATGGCTATGAAGGGAACTG+TGG | - | 8683:30656-30675 | MS.gene005636:CDS | 45.0% | |
| TCACTGACAAGGCCAACATT+GGG | - | 8683:32758-32777 | MS.gene005636:intron | 45.0% | |
| TCGGGATTTGAAAGCGATTC+AGG | - | 8683:30563-30582 | MS.gene005636:CDS | 45.0% | |
| TGCAAAAAGCAAGCAAGGCA+TGG | + | 8683:32582-32601 | None:intergenic | 45.0% | |
| TTGAGCAACCCTAATAGGTG+GGG | - | 8683:33015-33034 | MS.gene005636:CDS | 45.0% | |
| TTGCTCGGGCAAGCTAATAA+AGG | + | 8683:32383-32402 | None:intergenic | 45.0% | |
| ! | CATAAAGGGCCCGTTTGTTA+CGG | + | 8683:31210-31229 | None:intergenic | 45.0% |
| ! | TCCCAAATTGCATGTCGCTT+TGG | - | 8683:31313-31332 | MS.gene005636:CDS | 45.0% |
| !! | AGGGAGGGTTGTTGACTTTA+TGG | - | 8683:32711-32730 | MS.gene005636:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | 8683:31637-31656 | MS.gene005636:intron | 45.0% |
| CAAGCTGAGTACCCCAATGT+TGG | + | 8683:32773-32792 | None:intergenic | 50.0% | |
| CACTGACAAGGCCAACATTG+GGG | - | 8683:32759-32778 | MS.gene005636:intron | 50.0% | |
| CAGGGAACTGTGAACTTCCT+TGG | - | 8683:32200-32219 | MS.gene005636:intron | 50.0% | |
| CCCAACCACGATTTCGAGAT+TGG | + | 8683:32666-32685 | None:intergenic | 50.0% | |
| CTCAACTGCCCAAGGTAACT+AGG | - | 8683:30761-30780 | MS.gene005636:CDS | 50.0% | |
| GAAAATGTTCCACGAGGAGC+CGG | + | 8683:33144-33163 | None:intergenic | 50.0% | |
| GCTATGAAGGGAACTGTGGA+TGG | - | 8683:30660-30679 | MS.gene005636:CDS | 50.0% | |
| GTCACTGACAAGGCCAACAT+TGG | - | 8683:32757-32776 | MS.gene005636:intron | 50.0% | |
| ! | CTGCGATGAGCAACTTTTGG+TGG | - | 8683:32867-32886 | MS.gene005636:CDS | 50.0% |
| ! | GACATGCAATTTGGGACGGA+GGG | + | 8683:31309-31328 | None:intergenic | 50.0% |
| GAAGTAGGCTCAACTGCCCA+AGG | - | 8683:30753-30772 | MS.gene005636:CDS | 55.0% | |
| ! | CGACATGCAATTTGGGACGG+AGG | + | 8683:31310-31329 | None:intergenic | 55.0% |
| ATTACGCTTCCGGCTCCTCG+TGG | - | 8683:33132-33151 | MS.gene005636:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 8683 | gene | 30339 | 33227 | 30339 | ID=MS.gene005636 |
| 8683 | mRNA | 30339 | 33227 | 30339 | ID=MS.gene005636.t1;Parent=MS.gene005636 |
| 8683 | exon | 32982 | 33227 | 32982 | ID=MS.gene005636.t1.exon1;Parent=MS.gene005636.t1 |
| 8683 | CDS | 32982 | 33227 | 32982 | ID=cds.MS.gene005636.t1;Parent=MS.gene005636.t1 |
| 8683 | exon | 32792 | 32897 | 32792 | ID=MS.gene005636.t1.exon2;Parent=MS.gene005636.t1 |
| 8683 | CDS | 32792 | 32897 | 32792 | ID=cds.MS.gene005636.t1;Parent=MS.gene005636.t1 |
| 8683 | exon | 30339 | 31387 | 30339 | ID=MS.gene005636.t1.exon3;Parent=MS.gene005636.t1 |
| 8683 | CDS | 30339 | 31387 | 30339 | ID=cds.MS.gene005636.t1;Parent=MS.gene005636.t1 |
| Gene Sequence |
| Protein sequence |
