Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98671.t1 | AES79590.1 | 95.4 | 350 | 16 | 0 | 1 | 350 | 1 | 350 | 1.50E-196 | 695.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98671.t1 | G7KT89 | 95.4 | 350 | 16 | 0 | 1 | 350 | 1 | 350 | 1.1e-196 | 695.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene98671.t1 | MTR_7g070100 | 95.429 | 350 | 16 | 0 | 1 | 350 | 1 | 350 | 0.0 | 669 |
| MS.gene98671.t1 | MTR_4g133490 | 60.458 | 349 | 132 | 4 | 3 | 348 | 1 | 346 | 5.61e-136 | 391 |
| MS.gene98671.t1 | MTR_3g006120 | 58.309 | 343 | 139 | 4 | 8 | 347 | 8 | 349 | 2.33e-135 | 389 |
| MS.gene98671.t1 | MTR_3g006100 | 57.849 | 344 | 141 | 4 | 8 | 348 | 8 | 350 | 1.54e-134 | 387 |
| MS.gene98671.t1 | MTR_3g006140 | 55.172 | 348 | 152 | 4 | 5 | 349 | 27 | 373 | 1.39e-128 | 373 |
| MS.gene98671.t1 | MTR_3g006180 | 57.227 | 339 | 141 | 4 | 14 | 349 | 1 | 338 | 3.84e-128 | 370 |
| MS.gene98671.t1 | MTR_3g006010 | 56.105 | 344 | 147 | 4 | 7 | 347 | 124 | 466 | 4.67e-128 | 375 |
| MS.gene98671.t1 | MTR_4g133320 | 59.871 | 309 | 118 | 4 | 43 | 348 | 1 | 306 | 8.02e-115 | 335 |
| MS.gene98671.t1 | MTR_3g045700 | 53.977 | 352 | 148 | 8 | 6 | 350 | 6 | 350 | 6.16e-114 | 335 |
| MS.gene98671.t1 | MTR_3g068220 | 51.977 | 354 | 157 | 6 | 5 | 348 | 5 | 355 | 2.08e-112 | 331 |
| MS.gene98671.t1 | MTR_6g091830 | 49.438 | 356 | 165 | 7 | 6 | 350 | 104 | 455 | 7.57e-107 | 320 |
| MS.gene98671.t1 | MTR_7g083950 | 52.825 | 354 | 150 | 9 | 5 | 350 | 88 | 432 | 7.47e-106 | 317 |
| MS.gene98671.t1 | MTR_6g092140 | 49.157 | 356 | 166 | 7 | 6 | 350 | 104 | 455 | 8.30e-106 | 318 |
| MS.gene98671.t1 | MTR_1g100280 | 47.899 | 357 | 140 | 11 | 6 | 350 | 15 | 337 | 6.12e-90 | 273 |
| MS.gene98671.t1 | MTR_6g088340 | 47.468 | 316 | 147 | 9 | 46 | 348 | 122 | 431 | 5.88e-85 | 263 |
| MS.gene98671.t1 | MTR_3g085910 | 44.548 | 321 | 116 | 6 | 5 | 312 | 4 | 275 | 1.04e-82 | 253 |
| MS.gene98671.t1 | MTR_6g011110 | 48.387 | 279 | 131 | 4 | 82 | 350 | 2 | 277 | 1.43e-81 | 249 |
| MS.gene98671.t1 | MTR_3g086480 | 49.027 | 257 | 122 | 5 | 88 | 341 | 2 | 252 | 2.13e-74 | 231 |
| MS.gene98671.t1 | MTR_1g109340 | 52.174 | 253 | 112 | 4 | 102 | 349 | 106 | 354 | 1.32e-73 | 232 |
| MS.gene98671.t1 | MTR_1g109520 | 56.329 | 158 | 64 | 3 | 197 | 349 | 19 | 176 | 4.79e-47 | 157 |
| MS.gene98671.t1 | MTR_1g089620 | 59.829 | 117 | 45 | 1 | 178 | 294 | 34 | 148 | 3.61e-40 | 143 |
| MS.gene98671.t1 | MTR_1g089085 | 52.857 | 140 | 60 | 3 | 5 | 142 | 40 | 175 | 2.09e-36 | 130 |
| MS.gene98671.t1 | MTR_1g109090 | 53.782 | 119 | 53 | 2 | 6 | 122 | 18 | 136 | 3.26e-33 | 120 |
| MS.gene98671.t1 | MTR_0128s0040 | 50.735 | 136 | 66 | 1 | 33 | 168 | 3 | 137 | 4.72e-33 | 120 |
| MS.gene98671.t1 | MTR_6g023220 | 27.666 | 347 | 236 | 8 | 8 | 347 | 17 | 355 | 1.42e-31 | 122 |
| MS.gene98671.t1 | MTR_1g106050 | 58.000 | 100 | 41 | 1 | 3 | 101 | 1 | 100 | 7.19e-30 | 111 |
| MS.gene98671.t1 | MTR_1g012330 | 53.571 | 112 | 52 | 0 | 90 | 201 | 10 | 121 | 1.55e-29 | 114 |
| MS.gene98671.t1 | MTR_1g093300 | 53.465 | 101 | 45 | 2 | 181 | 280 | 7 | 106 | 7.04e-26 | 101 |
| MS.gene98671.t1 | MTR_6g091850 | 46.535 | 101 | 48 | 3 | 256 | 350 | 1 | 101 | 6.04e-19 | 81.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 79 sgRNAs with CRISPR-Local
Find 87 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACCTTCTTTCTTCTTCTAAA+AGG | 0.124409 | 7.1:-31779992 | None:intergenic |
| TCCAAACTTCTTCATATTCT+AGG | 0.200364 | 7.1:+31779828 | MS.gene98671:CDS |
| GAAATTATATCTAGCATTTC+CGG | 0.210930 | 7.1:-31779692 | None:intergenic |
| GAAGAAGTTTGGAAAATTAA+AGG | 0.234327 | 7.1:-31779818 | None:intergenic |
| TTCTAGTGGTTATCTAATTA+TGG | 0.249660 | 7.1:+31779937 | MS.gene98671:CDS |
| GATGATCTCTTTCAATTTGC+TGG | 0.255762 | 7.1:+31779731 | MS.gene98671:CDS |
| GTCTATCAATCTCGCGATTC+TGG | 0.288124 | 7.1:+31780139 | MS.gene98671:CDS |
| TTATGGGGATATTCCTATTC+CGG | 0.290074 | 7.1:+31779911 | MS.gene98671:CDS |
| ATCATCGAAATCTAGATTCT+TGG | 0.315769 | 7.1:-31779714 | None:intergenic |
| CCCTAGAATATGAAGAAGTT+TGG | 0.318755 | 7.1:-31779829 | None:intergenic |
| CGAAAACACATTGTGCCTTC+TGG | 0.321255 | 7.1:+31780595 | MS.gene98671:CDS |
| TTCCAGCTTCTCATAATTCA+TGG | 0.322422 | 7.1:-31780422 | None:intergenic |
| GCTTGAAGATGGGTAGCTTA+TGG | 0.338776 | 7.1:+31779894 | MS.gene98671:CDS |
| CTTGAAGATGGGTAGCTTAT+GGG | 0.343222 | 7.1:+31779895 | MS.gene98671:CDS |
| CGGTAACTTTCTCGTGCCTT+AGG | 0.343966 | 7.1:+31780317 | MS.gene98671:CDS |
| TCTTCAAGCGGTAAGCTCTT+TGG | 0.347884 | 7.1:-31779880 | None:intergenic |
| TTTGGAAAATTAAAGGTGCT+TGG | 0.394702 | 7.1:-31779811 | None:intergenic |
| TACACATCCAATACTTTCTC+GGG | 0.395877 | 7.1:-31780382 | None:intergenic |
| GTACACATCCAATACTTTCT+CGG | 0.396731 | 7.1:-31780383 | None:intergenic |
| TGCAGAATGCCATGTGTATT+CGG | 0.401310 | 7.1:+31780555 | MS.gene98671:CDS |
| CCTTCTTTCTTCTTCTAAAA+GGG | 0.403461 | 7.1:-31779991 | None:intergenic |
| CAAACTTCTACTGGTTAGAT+TGG | 0.405019 | 7.1:+31780641 | MS.gene98671:CDS |
| TATGAGAAGCTGGAAACTTT+GGG | 0.406395 | 7.1:+31780430 | MS.gene98671:CDS |
| TTGGAAAATTAAAGGTGCTT+GGG | 0.406624 | 7.1:-31779810 | None:intergenic |
| CTCTCATATCCCCACCTGCT+CGG | 0.408009 | 7.1:-31780505 | None:intergenic |
| ATGGAATGTTGTGGACTTTG+TGG | 0.412572 | 7.1:+31780192 | MS.gene98671:CDS |
| AAGCGGTAAGCTCTTTGGTT+TGG | 0.413393 | 7.1:-31779875 | None:intergenic |
| GACAAACTCTTCAGAACCTT+TGG | 0.426895 | 7.1:-31780080 | None:intergenic |
| CCAAACTTCTTCATATTCTA+GGG | 0.427155 | 7.1:+31779829 | MS.gene98671:CDS |
| TATGGGGATATTCCTATTCC+GGG | 0.435592 | 7.1:+31779912 | MS.gene98671:CDS |
| TTATGAGAAGCTGGAAACTT+TGG | 0.436869 | 7.1:+31780429 | MS.gene98671:CDS |
| GGTTGGCGTACTCATTCCAT+AGG | 0.441891 | 7.1:+31780160 | MS.gene98671:CDS |
| ACCTTTGGCAAAAGCAAGTA+AGG | 0.446128 | 7.1:-31780065 | None:intergenic |
| AAGAGCTTACCGCTTGAAGA+TGG | 0.452320 | 7.1:+31779883 | MS.gene98671:CDS |
| CTAGTAGATCAAACTTCTAC+TGG | 0.455579 | 7.1:+31780632 | MS.gene98671:CDS |
| TTGCTGGTGTGTGCAAGAAC+TGG | 0.471044 | 7.1:+31779747 | MS.gene98671:CDS |
| TCTCATATCCCCACCTGCTC+GGG | 0.471064 | 7.1:-31780504 | None:intergenic |
| AACCATGAATTATGAGAAGC+TGG | 0.471305 | 7.1:+31780420 | MS.gene98671:CDS |
| TAGTGGTTATCTAATTATGG+TGG | 0.475723 | 7.1:+31779940 | MS.gene98671:CDS |
| ATCAATCTCGCGATTCTGGT+TGG | 0.493165 | 7.1:+31780143 | MS.gene98671:CDS |
| CAGTAGAAGTTTGATCTACT+AGG | 0.493687 | 7.1:-31780631 | None:intergenic |
| AACTTTCTCGTGCCTTAGGT+TGG | 0.499150 | 7.1:+31780321 | MS.gene98671:CDS |
| ACCACTAGAAGACCCGGAAT+AGG | 0.500724 | 7.1:-31779924 | None:intergenic |
| GTTGGCGTACTCATTCCATA+GGG | 0.510856 | 7.1:+31780161 | MS.gene98671:CDS |
| AAAGATGATAATGGAAGCAC+AGG | 0.515704 | 7.1:+31779655 | None:intergenic |
| ATCGATACCTCAGTGCTTCG+AGG | 0.526359 | 7.1:+31780016 | MS.gene98671:CDS |
| GTGCTTTGAGCAACCCGAGC+AGG | 0.526545 | 7.1:+31780491 | MS.gene98671:CDS |
| ACAGGACTGTCAACTTCCTC+CGG | 0.530785 | 7.1:+31779673 | MS.gene98671:CDS |
| TGTCCGCCTTGTCAGTGATA+AGG | 0.532182 | 7.1:-31780234 | None:intergenic |
| CTTTGAGCAACCCGAGCAGG+TGG | 0.539328 | 7.1:+31780494 | MS.gene98671:CDS |
| TCCTATTCCGGGTCTTCTAG+TGG | 0.539771 | 7.1:+31779923 | MS.gene98671:CDS |
| TGATGAGGTAGATTATTCTC+TGG | 0.553091 | 7.1:+31780681 | MS.gene98671:CDS |
| ACAAAGTCCACAACATTCCA+TGG | 0.554316 | 7.1:-31780190 | None:intergenic |
| AGAATTGAACAATGCTCCCT+CGG | 0.555089 | 7.1:+31780297 | MS.gene98671:CDS |
| AGAGCTTACCGCTTGAAGAT+GGG | 0.564669 | 7.1:+31779884 | MS.gene98671:CDS |
| ATCACTGACAAGGCGGACAT+AGG | 0.567528 | 7.1:+31780238 | MS.gene98671:CDS |
| TTGAAGATGGGTAGCTTATG+GGG | 0.568759 | 7.1:+31779896 | MS.gene98671:CDS |
| TGCTCGGGTTGCTCAAAGCA+CGG | 0.571874 | 7.1:-31780489 | None:intergenic |
| AGTGGTTATCTAATTATGGT+GGG | 0.579988 | 7.1:+31779941 | MS.gene98671:CDS |
| TTGTGATGAACAGCTTCTAG+TGG | 0.581224 | 7.1:+31780348 | MS.gene98671:CDS |
| TTGAGCAACCCGAGCAGGTG+GGG | 0.592564 | 7.1:+31780496 | MS.gene98671:CDS |
| TCTACCTCATCATGTAAATG+TGG | 0.596221 | 7.1:-31780670 | None:intergenic |
| GGGAAATCCATGGAATGTTG+TGG | 0.600355 | 7.1:+31780183 | MS.gene98671:CDS |
| CATCACAACTAACCAACCTA+AGG | 0.603304 | 7.1:-31780333 | None:intergenic |
| TAGATAACCACTAGAAGACC+CGG | 0.622971 | 7.1:-31779930 | None:intergenic |
| TTTGAGCAACCCGAGCAGGT+GGG | 0.626036 | 7.1:+31780495 | MS.gene98671:CDS |
| TGGCGTACTCATTCCATAGG+GGG | 0.653522 | 7.1:+31780163 | MS.gene98671:CDS |
| ATAAGCTACCCATCTTCAAG+CGG | 0.659986 | 7.1:-31779892 | None:intergenic |
| GGAGTTTGAAGACTACCAGA+AGG | 0.677143 | 7.1:-31780610 | None:intergenic |
| ATTATATCTAGCATTTCCGG+AGG | 0.679240 | 7.1:-31779689 | None:intergenic |
| TATACACCTTATCACTGACA+AGG | 0.694872 | 7.1:+31780228 | MS.gene98671:CDS |
| AGGCACGAGAAAGTTACCGA+GGG | 0.694924 | 7.1:-31780313 | None:intergenic |
| TATCATCCACCGAATACACA+TGG | 0.701006 | 7.1:-31780564 | None:intergenic |
| ACACCTTATCACTGACAAGG+CGG | 0.705237 | 7.1:+31780231 | MS.gene98671:CDS |
| AAGGCACGAGAAAGTTACCG+AGG | 0.706343 | 7.1:-31780314 | None:intergenic |
| CTGGTGTGTGCAAGAACTGG+AGG | 0.709297 | 7.1:+31779750 | MS.gene98671:CDS |
| TTGGCGTACTCATTCCATAG+GGG | 0.712250 | 7.1:+31780162 | MS.gene98671:CDS |
| AAATTTACCTCGAAGCACTG+AGG | 0.744997 | 7.1:-31780023 | None:intergenic |
| AGAATGCCATGTGTATTCGG+TGG | 0.762277 | 7.1:+31780558 | MS.gene98671:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTACTGCATAAATTTTC+TGG | + | chr7.1:31779784-31779803 | MS.gene98671:CDS | 20.0% |
| ! | GAAATTATATCTAGCATTTC+CGG | - | chr7.1:31779695-31779714 | None:intergenic | 25.0% |
| ! | GAAGAAGTTTGGAAAATTAA+AGG | - | chr7.1:31779821-31779840 | None:intergenic | 25.0% |
| ! | TTCTAGTGGTTATCTAATTA+TGG | + | chr7.1:31779937-31779956 | MS.gene98671:CDS | 25.0% |
| ACCTTCTTTCTTCTTCTAAA+AGG | - | chr7.1:31779995-31780014 | None:intergenic | 30.0% | |
| AGTGGTTATCTAATTATGGT+GGG | + | chr7.1:31779941-31779960 | MS.gene98671:CDS | 30.0% | |
| ATCATCGAAATCTAGATTCT+TGG | - | chr7.1:31779717-31779736 | None:intergenic | 30.0% | |
| CCAAACTTCTTCATATTCTA+GGG | + | chr7.1:31779829-31779848 | MS.gene98671:CDS | 30.0% | |
| TAGTGGTTATCTAATTATGG+TGG | + | chr7.1:31779940-31779959 | MS.gene98671:CDS | 30.0% | |
| TCCAAACTTCTTCATATTCT+AGG | + | chr7.1:31779828-31779847 | MS.gene98671:CDS | 30.0% | |
| ! | CCTTCTTTCTTCTTCTAAAA+GGG | - | chr7.1:31779994-31780013 | None:intergenic | 30.0% |
| ! | TTTTCCACATTTACATGATG+AGG | + | chr7.1:31780666-31780685 | MS.gene98671:CDS | 30.0% |
| !! | TTGGAAAATTAAAGGTGCTT+GGG | - | chr7.1:31779813-31779832 | None:intergenic | 30.0% |
| !! | TTTGGAAAATTAAAGGTGCT+TGG | - | chr7.1:31779814-31779833 | None:intergenic | 30.0% |
| AACCATGAATTATGAGAAGC+TGG | + | chr7.1:31780420-31780439 | MS.gene98671:CDS | 35.0% | |
| ATTATATCTAGCATTTCCGG+AGG | - | chr7.1:31779692-31779711 | None:intergenic | 35.0% | |
| CAGTAGAAGTTTGATCTACT+AGG | - | chr7.1:31780634-31780653 | None:intergenic | 35.0% | |
| CCCTAGAATATGAAGAAGTT+TGG | - | chr7.1:31779832-31779851 | None:intergenic | 35.0% | |
| CTAGTAGATCAAACTTCTAC+TGG | + | chr7.1:31780632-31780651 | MS.gene98671:CDS | 35.0% | |
| GATGATCTCTTTCAATTTGC+TGG | + | chr7.1:31779731-31779750 | MS.gene98671:CDS | 35.0% | |
| GTACACATCCAATACTTTCT+CGG | - | chr7.1:31780386-31780405 | None:intergenic | 35.0% | |
| TACACATCCAATACTTTCTC+GGG | - | chr7.1:31780385-31780404 | None:intergenic | 35.0% | |
| TATACACCTTATCACTGACA+AGG | + | chr7.1:31780228-31780247 | MS.gene98671:CDS | 35.0% | |
| TATGAGAAGCTGGAAACTTT+GGG | + | chr7.1:31780430-31780449 | MS.gene98671:CDS | 35.0% | |
| TCTACCTCATCATGTAAATG+TGG | - | chr7.1:31780673-31780692 | None:intergenic | 35.0% | |
| TGATGAGGTAGATTATTCTC+TGG | + | chr7.1:31780681-31780700 | MS.gene98671:CDS | 35.0% | |
| TTATGAGAAGCTGGAAACTT+TGG | + | chr7.1:31780429-31780448 | MS.gene98671:CDS | 35.0% | |
| TTATGGGGATATTCCTATTC+CGG | + | chr7.1:31779911-31779930 | MS.gene98671:CDS | 35.0% | |
| TTCCAGCTTCTCATAATTCA+TGG | - | chr7.1:31780425-31780444 | None:intergenic | 35.0% | |
| ! | CAAACTTCTACTGGTTAGAT+TGG | + | chr7.1:31780641-31780660 | MS.gene98671:CDS | 35.0% |
| !! | CCCTTTTAGAAGAAGAAAGA+AGG | + | chr7.1:31779991-31780010 | MS.gene98671:CDS | 35.0% |
| !! | TTTTGTACCCGAGAAAGTAT+TGG | + | chr7.1:31780375-31780394 | MS.gene98671:CDS | 35.0% |
| !!! | CGAGGTAAATTTTCTAGTTC+TGG | + | chr7.1:31780034-31780053 | MS.gene98671:CDS | 35.0% |
| !!! | TCGCATTTTTTTATTCGTCG+TGG | + | chr7.1:31780458-31780477 | MS.gene98671:CDS | 35.0% |
| ACAAAGTCCACAACATTCCA+TGG | - | chr7.1:31780193-31780212 | None:intergenic | 40.0% | |
| ACCTTTGGCAAAAGCAAGTA+AGG | - | chr7.1:31780068-31780087 | None:intergenic | 40.0% | |
| AGAATTGAACAATGCTCCCT+CGG | + | chr7.1:31780297-31780316 | MS.gene98671:CDS | 40.0% | |
| ATAAGCTACCCATCTTCAAG+CGG | - | chr7.1:31779895-31779914 | None:intergenic | 40.0% | |
| ATGGAATGTTGTGGACTTTG+TGG | + | chr7.1:31780192-31780211 | MS.gene98671:CDS | 40.0% | |
| CATCACAACTAACCAACCTA+AGG | - | chr7.1:31780336-31780355 | None:intergenic | 40.0% | |
| CTTGAAGATGGGTAGCTTAT+GGG | + | chr7.1:31779895-31779914 | MS.gene98671:CDS | 40.0% | |
| GACAAACTCTTCAGAACCTT+TGG | - | chr7.1:31780083-31780102 | None:intergenic | 40.0% | |
| TAGATAACCACTAGAAGACC+CGG | - | chr7.1:31779933-31779952 | None:intergenic | 40.0% | |
| TATCATCCACCGAATACACA+TGG | - | chr7.1:31780567-31780586 | None:intergenic | 40.0% | |
| TATGGGGATATTCCTATTCC+GGG | + | chr7.1:31779912-31779931 | MS.gene98671:CDS | 40.0% | |
| TGCAGAATGCCATGTGTATT+CGG | + | chr7.1:31780555-31780574 | MS.gene98671:CDS | 40.0% | |
| TTGAAGATGGGTAGCTTATG+GGG | + | chr7.1:31779896-31779915 | MS.gene98671:CDS | 40.0% | |
| TTGTGATGAACAGCTTCTAG+TGG | + | chr7.1:31780348-31780367 | MS.gene98671:CDS | 40.0% | |
| !! | AAATTTACCTCGAAGCACTG+AGG | - | chr7.1:31780026-31780045 | None:intergenic | 40.0% |
| AACTTTCTCGTGCCTTAGGT+TGG | + | chr7.1:31780321-31780340 | MS.gene98671:CDS | 45.0% | |
| AAGAGCTTACCGCTTGAAGA+TGG | + | chr7.1:31779883-31779902 | MS.gene98671:CDS | 45.0% | |
| AAGCGGTAAGCTCTTTGGTT+TGG | - | chr7.1:31779878-31779897 | None:intergenic | 45.0% | |
| ACACCTTATCACTGACAAGG+CGG | + | chr7.1:31780231-31780250 | MS.gene98671:CDS | 45.0% | |
| AGAATGCCATGTGTATTCGG+TGG | + | chr7.1:31780558-31780577 | MS.gene98671:CDS | 45.0% | |
| AGAGCTTACCGCTTGAAGAT+GGG | + | chr7.1:31779884-31779903 | MS.gene98671:CDS | 45.0% | |
| ATCAATCTCGCGATTCTGGT+TGG | + | chr7.1:31780143-31780162 | MS.gene98671:CDS | 45.0% | |
| ATTCCATAGGGGGAAATCCA+TGG | + | chr7.1:31780173-31780192 | MS.gene98671:CDS | 45.0% | |
| ATTCCATGGATTTCCCCCTA+TGG | - | chr7.1:31780179-31780198 | None:intergenic | 45.0% | |
| CGAAAACACATTGTGCCTTC+TGG | + | chr7.1:31780595-31780614 | MS.gene98671:CDS | 45.0% | |
| GCTTGAAGATGGGTAGCTTA+TGG | + | chr7.1:31779894-31779913 | MS.gene98671:CDS | 45.0% | |
| GGAGTTTGAAGACTACCAGA+AGG | - | chr7.1:31780613-31780632 | None:intergenic | 45.0% | |
| GGGAAATCCATGGAATGTTG+TGG | + | chr7.1:31780183-31780202 | MS.gene98671:CDS | 45.0% | |
| GTCTATCAATCTCGCGATTC+TGG | + | chr7.1:31780139-31780158 | MS.gene98671:CDS | 45.0% | |
| GTTGGCGTACTCATTCCATA+GGG | + | chr7.1:31780161-31780180 | MS.gene98671:CDS | 45.0% | |
| TCTTCAAGCGGTAAGCTCTT+TGG | - | chr7.1:31779883-31779902 | None:intergenic | 45.0% | |
| TTGGCGTACTCATTCCATAG+GGG | + | chr7.1:31780162-31780181 | MS.gene98671:CDS | 45.0% | |
| !! | GCCTTACTTGCTTTTGCCAA+AGG | + | chr7.1:31780064-31780083 | MS.gene98671:CDS | 45.0% |
| AAGGCACGAGAAAGTTACCG+AGG | - | chr7.1:31780317-31780336 | None:intergenic | 50.0% | |
| ACAGGACTGTCAACTTCCTC+CGG | + | chr7.1:31779673-31779692 | MS.gene98671:CDS | 50.0% | |
| ACCACTAGAAGACCCGGAAT+AGG | - | chr7.1:31779927-31779946 | None:intergenic | 50.0% | |
| AGGCACGAGAAAGTTACCGA+GGG | - | chr7.1:31780316-31780335 | None:intergenic | 50.0% | |
| ATCACTGACAAGGCGGACAT+AGG | + | chr7.1:31780238-31780257 | MS.gene98671:CDS | 50.0% | |
| ATCGATACCTCAGTGCTTCG+AGG | + | chr7.1:31780016-31780035 | MS.gene98671:CDS | 50.0% | |
| CGGTAACTTTCTCGTGCCTT+AGG | + | chr7.1:31780317-31780336 | MS.gene98671:CDS | 50.0% | |
| GGTTGGCGTACTCATTCCAT+AGG | + | chr7.1:31780160-31780179 | MS.gene98671:CDS | 50.0% | |
| TCCTATTCCGGGTCTTCTAG+TGG | + | chr7.1:31779923-31779942 | MS.gene98671:CDS | 50.0% | |
| TGGCGTACTCATTCCATAGG+GGG | + | chr7.1:31780163-31780182 | MS.gene98671:CDS | 50.0% | |
| TGTCCGCCTTGTCAGTGATA+AGG | - | chr7.1:31780237-31780256 | None:intergenic | 50.0% | |
| TTGCTGGTGTGTGCAAGAAC+TGG | + | chr7.1:31779747-31779766 | MS.gene98671:CDS | 50.0% | |
| CTCTCATATCCCCACCTGCT+CGG | - | chr7.1:31780508-31780527 | None:intergenic | 55.0% | |
| CTGGTGTGTGCAAGAACTGG+AGG | + | chr7.1:31779750-31779769 | MS.gene98671:CDS | 55.0% | |
| TCTCATATCCCCACCTGCTC+GGG | - | chr7.1:31780507-31780526 | None:intergenic | 55.0% | |
| TTTGAGCAACCCGAGCAGGT+GGG | + | chr7.1:31780495-31780514 | MS.gene98671:CDS | 55.0% | |
| ! | TGCTCGGGTTGCTCAAAGCA+CGG | - | chr7.1:31780492-31780511 | None:intergenic | 55.0% |
| CTTTGAGCAACCCGAGCAGG+TGG | + | chr7.1:31780494-31780513 | MS.gene98671:CDS | 60.0% | |
| TTGAGCAACCCGAGCAGGTG+GGG | + | chr7.1:31780496-31780515 | MS.gene98671:CDS | 60.0% | |
| ! | GTGCTTTGAGCAACCCGAGC+AGG | + | chr7.1:31780491-31780510 | MS.gene98671:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 31779659 | 31780711 | 31779659 | ID=MS.gene98671 |
| chr7.1 | mRNA | 31779659 | 31780711 | 31779659 | ID=MS.gene98671.t1;Parent=MS.gene98671 |
| chr7.1 | exon | 31779659 | 31780711 | 31779659 | ID=MS.gene98671.t1.exon1;Parent=MS.gene98671.t1 |
| chr7.1 | CDS | 31779659 | 31780711 | 31779659 | ID=cds.MS.gene98671.t1;Parent=MS.gene98671.t1 |
| Gene Sequence |
| Protein sequence |