Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071039.t1 | AES79590.1 | 94.9 | 350 | 18 | 0 | 1 | 350 | 1 | 350 | 2.10E-195 | 691.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071039.t1 | G7KT89 | 94.9 | 350 | 18 | 0 | 1 | 350 | 1 | 350 | 1.5e-195 | 691.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene071039.t1 | MTR_7g070100 | 94.857 | 350 | 18 | 0 | 1 | 350 | 1 | 350 | 0.0 | 664 |
MS.gene071039.t1 | MTR_4g133490 | 60.745 | 349 | 131 | 4 | 3 | 348 | 1 | 346 | 3.28e-137 | 394 |
MS.gene071039.t1 | MTR_3g006120 | 58.017 | 343 | 140 | 4 | 8 | 347 | 8 | 349 | 9.74e-136 | 390 |
MS.gene071039.t1 | MTR_3g006100 | 57.267 | 344 | 143 | 4 | 8 | 348 | 8 | 350 | 1.09e-134 | 387 |
MS.gene071039.t1 | MTR_3g006140 | 55.172 | 348 | 152 | 4 | 5 | 349 | 27 | 373 | 1.04e-129 | 376 |
MS.gene071039.t1 | MTR_3g006010 | 56.395 | 344 | 146 | 4 | 7 | 347 | 124 | 466 | 1.89e-129 | 379 |
MS.gene071039.t1 | MTR_3g006180 | 57.227 | 339 | 141 | 4 | 14 | 349 | 1 | 338 | 5.88e-129 | 372 |
MS.gene071039.t1 | MTR_4g133320 | 60.194 | 309 | 117 | 4 | 43 | 348 | 1 | 306 | 6.82e-116 | 338 |
MS.gene071039.t1 | MTR_3g045700 | 53.125 | 352 | 151 | 8 | 6 | 350 | 6 | 350 | 8.18e-114 | 335 |
MS.gene071039.t1 | MTR_3g068220 | 51.412 | 354 | 159 | 6 | 5 | 348 | 5 | 355 | 9.10e-111 | 327 |
MS.gene071039.t1 | MTR_6g091830 | 49.438 | 356 | 165 | 7 | 6 | 350 | 104 | 455 | 1.03e-107 | 323 |
MS.gene071039.t1 | MTR_7g083950 | 53.390 | 354 | 148 | 10 | 5 | 350 | 88 | 432 | 1.39e-107 | 322 |
MS.gene071039.t1 | MTR_6g092140 | 49.157 | 356 | 166 | 7 | 6 | 350 | 104 | 455 | 1.32e-106 | 320 |
MS.gene071039.t1 | MTR_1g100280 | 48.179 | 357 | 139 | 11 | 6 | 350 | 15 | 337 | 4.39e-92 | 279 |
MS.gene071039.t1 | MTR_3g085910 | 45.483 | 321 | 113 | 6 | 5 | 312 | 4 | 275 | 3.18e-85 | 259 |
MS.gene071039.t1 | MTR_6g088340 | 47.619 | 315 | 146 | 9 | 47 | 348 | 123 | 431 | 7.38e-85 | 263 |
MS.gene071039.t1 | MTR_6g011110 | 48.746 | 279 | 130 | 4 | 82 | 350 | 2 | 277 | 2.31e-82 | 252 |
MS.gene071039.t1 | MTR_3g086480 | 49.027 | 257 | 122 | 5 | 88 | 341 | 2 | 252 | 1.79e-74 | 231 |
MS.gene071039.t1 | MTR_1g109340 | 51.779 | 253 | 113 | 4 | 102 | 349 | 106 | 354 | 2.70e-73 | 231 |
MS.gene071039.t1 | MTR_1g109520 | 55.696 | 158 | 65 | 3 | 197 | 349 | 19 | 176 | 1.01e-46 | 157 |
MS.gene071039.t1 | MTR_1g089620 | 58.974 | 117 | 46 | 1 | 178 | 294 | 34 | 148 | 9.30e-40 | 142 |
MS.gene071039.t1 | MTR_1g089085 | 52.518 | 139 | 62 | 2 | 5 | 142 | 40 | 175 | 4.06e-38 | 134 |
MS.gene071039.t1 | MTR_0128s0040 | 51.471 | 136 | 65 | 1 | 33 | 168 | 3 | 137 | 1.07e-34 | 124 |
MS.gene071039.t1 | MTR_1g109090 | 52.941 | 119 | 54 | 2 | 6 | 122 | 18 | 136 | 1.22e-33 | 122 |
MS.gene071039.t1 | MTR_6g023220 | 27.378 | 347 | 237 | 8 | 8 | 347 | 17 | 355 | 4.31e-31 | 120 |
MS.gene071039.t1 | MTR_1g106050 | 57.000 | 100 | 42 | 1 | 3 | 101 | 1 | 100 | 5.20e-30 | 112 |
MS.gene071039.t1 | MTR_1g012330 | 53.571 | 112 | 52 | 0 | 90 | 201 | 10 | 121 | 1.09e-29 | 114 |
MS.gene071039.t1 | MTR_1g093300 | 52.475 | 101 | 46 | 2 | 181 | 280 | 7 | 106 | 1.17e-25 | 100 |
MS.gene071039.t1 | MTR_6g091850 | 46.535 | 101 | 48 | 3 | 256 | 350 | 1 | 101 | 5.08e-19 | 81.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 77 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTCTTCTTCTAAA+AGG | 0.124409 | 7.3:-34803968 | None:intergenic |
CCAAACTTCTTCATATTCTA+AGG | 0.211068 | 7.3:+34803805 | MS.gene071039:CDS |
GAAGAAGTTTGGAAAATTAA+AGG | 0.234327 | 7.3:-34803794 | None:intergenic |
TTCTAGTGGTTATCTAATTA+TGG | 0.249660 | 7.3:+34803913 | MS.gene071039:CDS |
GAAATGATATCTAGCATTTC+CGG | 0.264535 | 7.3:-34803668 | None:intergenic |
GCTTGAAGATGGGTAGCTTT+TGG | 0.282022 | 7.3:+34803870 | MS.gene071039:CDS |
AATTTACTGCAGAAATATTC+TGG | 0.286197 | 7.3:+34803760 | MS.gene071039:CDS |
GTCTATCAATCTCGCGATTC+TGG | 0.288124 | 7.3:+34804115 | MS.gene071039:CDS |
CCTTAGAATATGAAGAAGTT+TGG | 0.307681 | 7.3:-34803805 | None:intergenic |
ATCATCGAAATCTAGATTCT+TGG | 0.315769 | 7.3:-34803690 | None:intergenic |
CGAAAACACATTGTGCCTTC+TGG | 0.321255 | 7.3:+34804571 | MS.gene071039:CDS |
TTCCAGCTTCTCATAATTCA+TGG | 0.322422 | 7.3:-34804398 | None:intergenic |
GATGATCTCTTTCAATTCTC+TGG | 0.341703 | 7.3:+34803707 | MS.gene071039:CDS |
CGGTAACTTTCTCGTGCCTT+AGG | 0.343966 | 7.3:+34804293 | MS.gene071039:CDS |
TCTTCAAGCGGTAAGCTCTT+TGG | 0.347884 | 7.3:-34803856 | None:intergenic |
TTTGGGGATATTCCTATTCC+GGG | 0.388542 | 7.3:+34803888 | MS.gene071039:CDS |
TTTGGAAAATTAAAGGTGCT+TGG | 0.394702 | 7.3:-34803787 | None:intergenic |
TACACATCCAATACTTTCTC+GGG | 0.395877 | 7.3:-34804358 | None:intergenic |
GTACACATCCAATACTTTCT+CGG | 0.396731 | 7.3:-34804359 | None:intergenic |
TGCAGAATGCCATGTGTATT+CGG | 0.401310 | 7.3:+34804531 | MS.gene071039:CDS |
CCTTCTTTCTTCTTCTAAAA+GGG | 0.403461 | 7.3:-34803967 | None:intergenic |
CAAACTTCTACTGGTTAGAT+TGG | 0.405019 | 7.3:+34804617 | MS.gene071039:CDS |
TATGAGAAGCTGGAAACTTT+GGG | 0.406395 | 7.3:+34804406 | MS.gene071039:CDS |
TTGGAAAATTAAAGGTGCTT+GGG | 0.406624 | 7.3:-34803786 | None:intergenic |
CTCTCATATCCCCACCTGCT+CGG | 0.408009 | 7.3:-34804481 | None:intergenic |
ATGGAATGTTGTGGACTTTG+TGG | 0.412572 | 7.3:+34804168 | MS.gene071039:CDS |
AAGCGGTAAGCTCTTTGGTT+TGG | 0.413393 | 7.3:-34803851 | None:intergenic |
GACAAACTCTTCAGAACCTT+TGG | 0.426895 | 7.3:-34804056 | None:intergenic |
CACAGGGGAAAAGATGATAA+TGG | 0.427700 | 7.3:+34803622 | None:intergenic |
TTATGAGAAGCTGGAAACTT+TGG | 0.436869 | 7.3:+34804405 | MS.gene071039:CDS |
GGTTGGCGTACTCATTCCAT+AGG | 0.441891 | 7.3:+34804136 | MS.gene071039:CDS |
AAGAGCTTACCGCTTGAAGA+TGG | 0.452320 | 7.3:+34803859 | MS.gene071039:CDS |
CTAGTAGATCAAACTTCTAC+TGG | 0.455579 | 7.3:+34804608 | MS.gene071039:CDS |
TCTCATATCCCCACCTGCTC+GGG | 0.471064 | 7.3:-34804480 | None:intergenic |
AACCATGAATTATGAGAAGC+TGG | 0.471305 | 7.3:+34804396 | MS.gene071039:CDS |
TAGTGGTTATCTAATTATGG+TGG | 0.475723 | 7.3:+34803916 | MS.gene071039:CDS |
ATCAATCTCGCGATTCTGGT+TGG | 0.493165 | 7.3:+34804119 | MS.gene071039:CDS |
CAGTAGAAGTTTGATCTACT+AGG | 0.493687 | 7.3:-34804607 | None:intergenic |
AACTTTCTCGTGCCTTAGGT+TGG | 0.499150 | 7.3:+34804297 | MS.gene071039:CDS |
ACCACTAGAAGACCCGGAAT+AGG | 0.500724 | 7.3:-34803900 | None:intergenic |
GTTGGCGTACTCATTCCATA+GGG | 0.510856 | 7.3:+34804137 | MS.gene071039:CDS |
ATCGATACCTCAGTGCTTCG+AGG | 0.526359 | 7.3:+34803992 | MS.gene071039:CDS |
GTGCTTTGAGCAACCCGAGC+AGG | 0.526545 | 7.3:+34804467 | MS.gene071039:CDS |
ACAGGACTGTCAACTTCCTC+CGG | 0.530785 | 7.3:+34803649 | MS.gene071039:CDS |
TGTCCGCCTTGTCAGTGATA+AGG | 0.532182 | 7.3:-34804210 | None:intergenic |
CTTTGAGCAACCCGAGCAGG+TGG | 0.539328 | 7.3:+34804470 | MS.gene071039:CDS |
TCCTATTCCGGGTCTTCTAG+TGG | 0.539771 | 7.3:+34803899 | MS.gene071039:CDS |
AAAGATGATAATGGAAGCAC+AGG | 0.544801 | 7.3:+34803631 | None:intergenic |
TGATGAGGTAGATTATTCTC+TGG | 0.553091 | 7.3:+34804657 | MS.gene071039:CDS |
TCTCTGGTGTATGCAAGAGC+TGG | 0.553693 | 7.3:+34803723 | MS.gene071039:CDS |
ACAAAGTCCACAACATTCCA+TGG | 0.554316 | 7.3:-34804166 | None:intergenic |
AGAATTGAACAATGCTCCCT+CGG | 0.555089 | 7.3:+34804273 | MS.gene071039:CDS |
CTGGTGTATGCAAGAGCTGG+AGG | 0.561274 | 7.3:+34803726 | MS.gene071039:CDS |
AGAGCTTACCGCTTGAAGAT+GGG | 0.564669 | 7.3:+34803860 | MS.gene071039:CDS |
ATCACTGACAAGGCGGACAT+AGG | 0.567528 | 7.3:+34804214 | MS.gene071039:CDS |
TGCTCGGGTTGCTCAAAGCA+CGG | 0.571874 | 7.3:-34804465 | None:intergenic |
AGTGGTTATCTAATTATGGT+GGG | 0.579988 | 7.3:+34803917 | MS.gene071039:CDS |
TTGTGATGAACAGCTTCTAG+TGG | 0.581224 | 7.3:+34804324 | MS.gene071039:CDS |
TTGAGCAACCCGAGCAGGTG+GGG | 0.592564 | 7.3:+34804472 | MS.gene071039:CDS |
TCTACCTCATCATGTAAATG+TGG | 0.596221 | 7.3:-34804646 | None:intergenic |
GGGAAATCCATGGAATGTTG+TGG | 0.600355 | 7.3:+34804159 | MS.gene071039:CDS |
CATCACAACTAACCAACCTA+AGG | 0.603304 | 7.3:-34804309 | None:intergenic |
TAGATAACCACTAGAAGACC+CGG | 0.622971 | 7.3:-34803906 | None:intergenic |
TTTGAGCAACCCGAGCAGGT+GGG | 0.626036 | 7.3:+34804471 | MS.gene071039:CDS |
TGGTGTATGCAAGAGCTGGA+GGG | 0.632009 | 7.3:+34803727 | MS.gene071039:CDS |
AAAAGCTACCCATCTTCAAG+CGG | 0.647978 | 7.3:-34803868 | None:intergenic |
TGGCGTACTCATTCCATAGG+GGG | 0.653522 | 7.3:+34804139 | MS.gene071039:CDS |
GGAGTTTGAAGACTACCAGA+AGG | 0.677143 | 7.3:-34804586 | None:intergenic |
TATACACCTTATCACTGACA+AGG | 0.694872 | 7.3:+34804204 | MS.gene071039:CDS |
AGGCACGAGAAAGTTACCGA+GGG | 0.694924 | 7.3:-34804289 | None:intergenic |
TATCATCCACCGAATACACA+TGG | 0.701006 | 7.3:-34804540 | None:intergenic |
ATGATATCTAGCATTTCCGG+AGG | 0.701875 | 7.3:-34803665 | None:intergenic |
ACACCTTATCACTGACAAGG+CGG | 0.705237 | 7.3:+34804207 | MS.gene071039:CDS |
AAGGCACGAGAAAGTTACCG+AGG | 0.706343 | 7.3:-34804290 | None:intergenic |
TTGGCGTACTCATTCCATAG+GGG | 0.712250 | 7.3:+34804138 | MS.gene071039:CDS |
AAATTTACCTCGAAGCACTG+AGG | 0.744997 | 7.3:-34803999 | None:intergenic |
AGAATGCCATGTGTATTCGG+TGG | 0.762277 | 7.3:+34804534 | MS.gene071039:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | AATTTACTGCAGAAATATTC+TGG | + | chr7.3:34803760-34803779 | MS.gene071039:CDS | 25.0% |
! | GAAGAAGTTTGGAAAATTAA+AGG | - | chr7.3:34803797-34803816 | None:intergenic | 25.0% |
! | TTCTAGTGGTTATCTAATTA+TGG | + | chr7.3:34803913-34803932 | MS.gene071039:CDS | 25.0% |
ACCTTCTTTCTTCTTCTAAA+AGG | - | chr7.3:34803971-34803990 | None:intergenic | 30.0% | |
AGTGGTTATCTAATTATGGT+GGG | + | chr7.3:34803917-34803936 | MS.gene071039:CDS | 30.0% | |
ATCATCGAAATCTAGATTCT+TGG | - | chr7.3:34803693-34803712 | None:intergenic | 30.0% | |
CCAAACTTCTTCATATTCTA+AGG | + | chr7.3:34803805-34803824 | MS.gene071039:CDS | 30.0% | |
CCTTAGAATATGAAGAAGTT+TGG | - | chr7.3:34803808-34803827 | None:intergenic | 30.0% | |
GAAATGATATCTAGCATTTC+CGG | - | chr7.3:34803671-34803690 | None:intergenic | 30.0% | |
TAGTGGTTATCTAATTATGG+TGG | + | chr7.3:34803916-34803935 | MS.gene071039:CDS | 30.0% | |
! | CCTTCTTTCTTCTTCTAAAA+GGG | - | chr7.3:34803970-34803989 | None:intergenic | 30.0% |
! | TTTTCCACATTTACATGATG+AGG | + | chr7.3:34804642-34804661 | MS.gene071039:CDS | 30.0% |
!! | TTGGAAAATTAAAGGTGCTT+GGG | - | chr7.3:34803789-34803808 | None:intergenic | 30.0% |
!! | TTTGGAAAATTAAAGGTGCT+TGG | - | chr7.3:34803790-34803809 | None:intergenic | 30.0% |
AACCATGAATTATGAGAAGC+TGG | + | chr7.3:34804396-34804415 | MS.gene071039:CDS | 35.0% | |
CAGTAGAAGTTTGATCTACT+AGG | - | chr7.3:34804610-34804629 | None:intergenic | 35.0% | |
CTAGTAGATCAAACTTCTAC+TGG | + | chr7.3:34804608-34804627 | MS.gene071039:CDS | 35.0% | |
GATGATCTCTTTCAATTCTC+TGG | + | chr7.3:34803707-34803726 | MS.gene071039:CDS | 35.0% | |
GTACACATCCAATACTTTCT+CGG | - | chr7.3:34804362-34804381 | None:intergenic | 35.0% | |
TACACATCCAATACTTTCTC+GGG | - | chr7.3:34804361-34804380 | None:intergenic | 35.0% | |
TATACACCTTATCACTGACA+AGG | + | chr7.3:34804204-34804223 | MS.gene071039:CDS | 35.0% | |
TATGAGAAGCTGGAAACTTT+GGG | + | chr7.3:34804406-34804425 | MS.gene071039:CDS | 35.0% | |
TCTACCTCATCATGTAAATG+TGG | - | chr7.3:34804649-34804668 | None:intergenic | 35.0% | |
TGATGAGGTAGATTATTCTC+TGG | + | chr7.3:34804657-34804676 | MS.gene071039:CDS | 35.0% | |
TTATGAGAAGCTGGAAACTT+TGG | + | chr7.3:34804405-34804424 | MS.gene071039:CDS | 35.0% | |
TTCCAGCTTCTCATAATTCA+TGG | - | chr7.3:34804401-34804420 | None:intergenic | 35.0% | |
! | CAAACTTCTACTGGTTAGAT+TGG | + | chr7.3:34804617-34804636 | MS.gene071039:CDS | 35.0% |
!! | CCCTTTTAGAAGAAGAAAGA+AGG | + | chr7.3:34803967-34803986 | MS.gene071039:CDS | 35.0% |
!! | TTTTGGGGATATTCCTATTC+CGG | + | chr7.3:34803887-34803906 | MS.gene071039:CDS | 35.0% |
!! | TTTTGTACCCGAGAAAGTAT+TGG | + | chr7.3:34804351-34804370 | MS.gene071039:CDS | 35.0% |
!!! | CGAGGTAAATTTTCTAGTTC+TGG | + | chr7.3:34804010-34804029 | MS.gene071039:CDS | 35.0% |
!!! | TCGCATTTTTTTATTCGTCG+TGG | + | chr7.3:34804434-34804453 | MS.gene071039:CDS | 35.0% |
AAAAGCTACCCATCTTCAAG+CGG | - | chr7.3:34803871-34803890 | None:intergenic | 40.0% | |
ACAAAGTCCACAACATTCCA+TGG | - | chr7.3:34804169-34804188 | None:intergenic | 40.0% | |
AGAATTGAACAATGCTCCCT+CGG | + | chr7.3:34804273-34804292 | MS.gene071039:CDS | 40.0% | |
ATGATATCTAGCATTTCCGG+AGG | - | chr7.3:34803668-34803687 | None:intergenic | 40.0% | |
ATGGAATGTTGTGGACTTTG+TGG | + | chr7.3:34804168-34804187 | MS.gene071039:CDS | 40.0% | |
CATCACAACTAACCAACCTA+AGG | - | chr7.3:34804312-34804331 | None:intergenic | 40.0% | |
GACAAACTCTTCAGAACCTT+TGG | - | chr7.3:34804059-34804078 | None:intergenic | 40.0% | |
TAGATAACCACTAGAAGACC+CGG | - | chr7.3:34803909-34803928 | None:intergenic | 40.0% | |
TATCATCCACCGAATACACA+TGG | - | chr7.3:34804543-34804562 | None:intergenic | 40.0% | |
TGCAGAATGCCATGTGTATT+CGG | + | chr7.3:34804531-34804550 | MS.gene071039:CDS | 40.0% | |
TTGTGATGAACAGCTTCTAG+TGG | + | chr7.3:34804324-34804343 | MS.gene071039:CDS | 40.0% | |
TTTGGGGATATTCCTATTCC+GGG | + | chr7.3:34803888-34803907 | MS.gene071039:CDS | 40.0% | |
! | CTTGAAGATGGGTAGCTTTT+GGG | + | chr7.3:34803871-34803890 | MS.gene071039:CDS | 40.0% |
! | TTGAAGATGGGTAGCTTTTG+GGG | + | chr7.3:34803872-34803891 | MS.gene071039:CDS | 40.0% |
!! | AAATTTACCTCGAAGCACTG+AGG | - | chr7.3:34804002-34804021 | None:intergenic | 40.0% |
!! | GCTTTACTTGCTTTTGCCAA+AGG | + | chr7.3:34804040-34804059 | MS.gene071039:CDS | 40.0% |
AACTTTCTCGTGCCTTAGGT+TGG | + | chr7.3:34804297-34804316 | MS.gene071039:CDS | 45.0% | |
AAGAGCTTACCGCTTGAAGA+TGG | + | chr7.3:34803859-34803878 | MS.gene071039:CDS | 45.0% | |
AAGCGGTAAGCTCTTTGGTT+TGG | - | chr7.3:34803854-34803873 | None:intergenic | 45.0% | |
ACACCTTATCACTGACAAGG+CGG | + | chr7.3:34804207-34804226 | MS.gene071039:CDS | 45.0% | |
AGAATGCCATGTGTATTCGG+TGG | + | chr7.3:34804534-34804553 | MS.gene071039:CDS | 45.0% | |
AGAGCTTACCGCTTGAAGAT+GGG | + | chr7.3:34803860-34803879 | MS.gene071039:CDS | 45.0% | |
ATCAATCTCGCGATTCTGGT+TGG | + | chr7.3:34804119-34804138 | MS.gene071039:CDS | 45.0% | |
ATTCCATAGGGGGAAATCCA+TGG | + | chr7.3:34804149-34804168 | MS.gene071039:CDS | 45.0% | |
ATTCCATGGATTTCCCCCTA+TGG | - | chr7.3:34804155-34804174 | None:intergenic | 45.0% | |
CGAAAACACATTGTGCCTTC+TGG | + | chr7.3:34804571-34804590 | MS.gene071039:CDS | 45.0% | |
GGAGTTTGAAGACTACCAGA+AGG | - | chr7.3:34804589-34804608 | None:intergenic | 45.0% | |
GGGAAATCCATGGAATGTTG+TGG | + | chr7.3:34804159-34804178 | MS.gene071039:CDS | 45.0% | |
GTCTATCAATCTCGCGATTC+TGG | + | chr7.3:34804115-34804134 | MS.gene071039:CDS | 45.0% | |
GTTGGCGTACTCATTCCATA+GGG | + | chr7.3:34804137-34804156 | MS.gene071039:CDS | 45.0% | |
TCTTCAAGCGGTAAGCTCTT+TGG | - | chr7.3:34803859-34803878 | None:intergenic | 45.0% | |
TTGGCGTACTCATTCCATAG+GGG | + | chr7.3:34804138-34804157 | MS.gene071039:CDS | 45.0% | |
! | GCTTGAAGATGGGTAGCTTT+TGG | + | chr7.3:34803870-34803889 | MS.gene071039:CDS | 45.0% |
AAGGCACGAGAAAGTTACCG+AGG | - | chr7.3:34804293-34804312 | None:intergenic | 50.0% | |
ACAGGACTGTCAACTTCCTC+CGG | + | chr7.3:34803649-34803668 | MS.gene071039:CDS | 50.0% | |
ACCACTAGAAGACCCGGAAT+AGG | - | chr7.3:34803903-34803922 | None:intergenic | 50.0% | |
AGGCACGAGAAAGTTACCGA+GGG | - | chr7.3:34804292-34804311 | None:intergenic | 50.0% | |
ATCACTGACAAGGCGGACAT+AGG | + | chr7.3:34804214-34804233 | MS.gene071039:CDS | 50.0% | |
ATCGATACCTCAGTGCTTCG+AGG | + | chr7.3:34803992-34804011 | MS.gene071039:CDS | 50.0% | |
CGGTAACTTTCTCGTGCCTT+AGG | + | chr7.3:34804293-34804312 | MS.gene071039:CDS | 50.0% | |
GGTTGGCGTACTCATTCCAT+AGG | + | chr7.3:34804136-34804155 | MS.gene071039:CDS | 50.0% | |
TCCTATTCCGGGTCTTCTAG+TGG | + | chr7.3:34803899-34803918 | MS.gene071039:CDS | 50.0% | |
TCTCTGGTGTATGCAAGAGC+TGG | + | chr7.3:34803723-34803742 | MS.gene071039:CDS | 50.0% | |
TGGCGTACTCATTCCATAGG+GGG | + | chr7.3:34804139-34804158 | MS.gene071039:CDS | 50.0% | |
TGGTGTATGCAAGAGCTGGA+GGG | + | chr7.3:34803727-34803746 | MS.gene071039:CDS | 50.0% | |
TGTCCGCCTTGTCAGTGATA+AGG | - | chr7.3:34804213-34804232 | None:intergenic | 50.0% | |
CTCTCATATCCCCACCTGCT+CGG | - | chr7.3:34804484-34804503 | None:intergenic | 55.0% | |
CTGGTGTATGCAAGAGCTGG+AGG | + | chr7.3:34803726-34803745 | MS.gene071039:CDS | 55.0% | |
TCTCATATCCCCACCTGCTC+GGG | - | chr7.3:34804483-34804502 | None:intergenic | 55.0% | |
TTTGAGCAACCCGAGCAGGT+GGG | + | chr7.3:34804471-34804490 | MS.gene071039:CDS | 55.0% | |
! | TGCTCGGGTTGCTCAAAGCA+CGG | - | chr7.3:34804468-34804487 | None:intergenic | 55.0% |
CTTTGAGCAACCCGAGCAGG+TGG | + | chr7.3:34804470-34804489 | MS.gene071039:CDS | 60.0% | |
TTGAGCAACCCGAGCAGGTG+GGG | + | chr7.3:34804472-34804491 | MS.gene071039:CDS | 60.0% | |
! | GTGCTTTGAGCAACCCGAGC+AGG | + | chr7.3:34804467-34804486 | MS.gene071039:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.3 | gene | 34803635 | 34804687 | 34803635 | ID=MS.gene071039 |
chr7.3 | mRNA | 34803635 | 34804687 | 34803635 | ID=MS.gene071039.t1;Parent=MS.gene071039 |
chr7.3 | exon | 34803635 | 34804687 | 34803635 | ID=MS.gene071039.t1.exon1;Parent=MS.gene071039.t1 |
chr7.3 | CDS | 34803635 | 34804687 | 34803635 | ID=cds.MS.gene071039.t1;Parent=MS.gene071039.t1 |
Gene Sequence |
Protein sequence |