AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene59977

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59977.t1 MTR_6g091830 81.562 461 64 6 1 446 1 455 0.0 756
MS.gene59977.t1 MTR_6g092140 81.128 461 66 6 1 446 1 455 0.0 752
MS.gene59977.t1 MTR_6g088340 73.019 467 71 5 1 446 1 433 0.0 673
MS.gene59977.t1 MTR_3g068220 68.000 350 100 1 103 440 2 351 9.55e-168 484
MS.gene59977.t1 MTR_3g006010 46.497 471 200 9 6 440 9 463 2.68e-131 395
MS.gene59977.t1 MTR_3g006140 55.801 362 137 4 94 440 15 368 1.86e-130 390
MS.gene59977.t1 MTR_4g133490 57.550 351 124 5 105 440 2 342 2.23e-130 389
MS.gene59977.t1 MTR_6g011110 66.906 278 89 2 171 446 1 277 3.61e-128 380
MS.gene59977.t1 MTR_3g006120 54.986 351 135 4 105 440 4 346 4.28e-128 383
MS.gene59977.t1 MTR_3g006100 53.846 351 139 4 105 440 4 346 3.30e-125 375
MS.gene59977.t1 MTR_3g006180 54.545 341 132 4 115 440 1 333 2.21e-121 365
MS.gene59977.t1 MTR_6g093070 89.005 191 21 0 441 631 116 306 1.03e-115 349
MS.gene59977.t1 MTR_6g093070 89.005 191 21 0 441 631 116 306 2.47e-115 350
MS.gene59977.t1 MTR_3g085910 55.864 324 71 5 104 404 2 276 3.92e-108 328
MS.gene59977.t1 MTR_4g133320 55.128 312 115 4 144 440 1 302 1.00e-107 329
MS.gene59977.t1 MTR_7g083950 44.966 447 187 13 18 446 27 432 1.78e-104 325
MS.gene59977.t1 MTR_3g086480 61.832 262 89 4 178 438 2 253 6.38e-100 306
MS.gene59977.t1 MTR_3g045700 49.728 368 142 10 103 446 2 350 5.73e-98 305
MS.gene59977.t1 MTR_7g070100 47.564 349 158 7 107 440 6 344 2.66e-90 285
MS.gene59977.t1 MTR_1g109340 39.318 440 159 10 7 440 12 349 4.92e-83 266
MS.gene59977.t1 MTR_1g100280 45.304 362 139 9 100 440 8 331 2.47e-82 264
MS.gene59977.t1 MTR_6g091850 83.158 95 16 0 346 440 1 95 2.58e-54 181
MS.gene59977.t1 MTR_1g089085 52.318 151 55 3 95 232 29 175 1.07e-40 147
MS.gene59977.t1 MTR_1g089620 60.833 120 42 1 265 384 34 148 1.47e-36 139
MS.gene59977.t1 MTR_1g109520 48.125 160 73 4 284 440 19 171 1.85e-36 135
MS.gene59977.t1 MTR_1g012330 51.449 138 64 1 171 305 1 138 1.79e-30 120
MS.gene59977.t1 MTR_1g109090 48.031 127 53 2 98 211 9 135 8.70e-30 115
MS.gene59977.t1 MTR_1g106050 58.586 99 29 1 105 191 2 100 4.52e-29 112
MS.gene59977.t1 MTR_0128s0040 41.791 134 64 3 134 255 3 134 3.95e-24 99.0
MS.gene59977.t1 MTR_6g023220 25.767 326 225 6 114 426 22 343 2.78e-22 99.8
MS.gene59977.t1 MTR_1g093300 53.191 94 42 1 268 361 7 98 5.58e-21 89.7
MS.gene59977.t1 MTR_3g006185 37.931 87 44 3 1 85 94 172 3.90e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene59977.t1 AT3G10572 35.025 197 110 4 438 630 42 224 9.13e-18 84.3
MS.gene59977.t1 AT3G10572 35.025 197 110 4 438 630 42 224 9.13e-18 84.3
MS.gene59977.t1 AT3G10572 35.052 194 108 4 441 630 113 292 4.68e-17 83.6

Find 132 sgRNAs with CRISPR-Local

Find 287 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATATTTCTTCTTGTAAA+TGG 0.163180 6.1:-71736524 None:intergenic
TTTGAAAGACACTTTGTTCT+TGG 0.213313 6.1:+71738615 MS.gene59977:CDS
TTTGATGACCTCTTTCAATT+TGG 0.236098 6.1:+71736260 MS.gene59977:CDS
TCTTTGTTGGATTGCTTATT+CGG 0.252635 6.1:+71736688 MS.gene59977:CDS
TCTTGGAATCGATGAATATT+TGG 0.252724 6.1:+71738632 MS.gene59977:CDS
GAGAATTTCATAAAATTTAT+TGG 0.253294 6.1:+71736303 MS.gene59977:CDS
AGGTAGATCTTGCAGTTTCC+TGG 0.283266 6.1:+71738703 MS.gene59977:CDS
TTATGTCAAGTTGGAATCTT+TGG 0.283864 6.1:+71736961 MS.gene59977:CDS
CTTTCTTCTCAAAACATAAC+AGG 0.297497 6.1:-71739625 None:intergenic
TTTGACTATCCATCTAGTTC+TGG 0.317542 6.1:+71740209 MS.gene59977:CDS
ATCAATCTCGAAATCTTTGT+TGG 0.320105 6.1:+71736675 MS.gene59977:CDS
GACATATTCCTCTGAGCCTT+TGG 0.328107 6.1:-71736612 None:intergenic
TTTGGACAAGTAATGGTTCT+TGG 0.334672 6.1:-71736343 None:intergenic
AGGATGAATAAGGTACTTAA+AGG 0.337066 6.1:+71735587 MS.gene59977:CDS
ATGGCAAACGAACATGGAAT+TGG 0.345392 6.1:+71735425 MS.gene59977:CDS
ATTCAAAGAAAGGATGAATA+AGG 0.348934 6.1:+71735577 MS.gene59977:CDS
TTCTTAACGGATGGAGTCTT+GGG 0.349901 6.1:+71738538 MS.gene59977:CDS
TGGATAGTCAAAATGATCTT+TGG 0.356306 6.1:-71740198 None:intergenic
ATGCCAGAATTCATTCTTCC+TGG 0.356806 6.1:+71737127 MS.gene59977:CDS
CGTTGTTGATGATCATTGAT+TGG 0.356815 6.1:-71735680 None:intergenic
AATTTATTGGAGGAATTTCA+TGG 0.361680 6.1:+71736316 MS.gene59977:CDS
CTCACTACTGCAACACTTCA+AGG 0.370762 6.1:+71740118 MS.gene59977:CDS
GTCTTTCAAATCTACTTTCA+CGG 0.373205 6.1:-71738602 None:intergenic
TAAGTTCCATTGTCATTTGT+AGG 0.378097 6.1:-71739411 None:intergenic
CTTTGTTGGATTGCTTATTC+GGG 0.379417 6.1:+71736689 MS.gene59977:CDS
ATGTTCCATGTGGCAAATAC+AGG 0.390944 6.1:+71737080 MS.gene59977:CDS
TGCTTATTCGGGACCACATA+AGG 0.394621 6.1:+71736700 MS.gene59977:CDS
TCATTGATTGGGATTGGAAT+TGG 0.394903 6.1:-71735668 None:intergenic
AACGAATAGAGGCATGTTCC+TGG 0.402411 6.1:+71739514 MS.gene59977:CDS
GGCAAATACAGGGTGTATAA+AGG 0.407440 6.1:+71737091 MS.gene59977:CDS
CAAAACAACGTTACGTAGAT+TGG 0.408142 6.1:+71737191 MS.gene59977:CDS
AAGAGAACTGTCAACTTCCT+TGG 0.409046 6.1:+71736204 MS.gene59977:CDS
TTGGACAAGTAATGGTTCTT+GGG 0.415778 6.1:-71736342 None:intergenic
TATGTCAAGTTGGAATCTTT+GGG 0.417393 6.1:+71736962 MS.gene59977:CDS
ATTGCCTTTCCAGAACTAGA+TGG 0.418014 6.1:-71740218 None:intergenic
TACTTCCGATTTGCCTATCA+AGG 0.418933 6.1:+71736443 MS.gene59977:CDS
AAAGAACTACATGAGTATAA+AGG 0.422651 6.1:+71739441 MS.gene59977:CDS
TGCTGTCATTGCAGAAGAAA+AGG 0.427057 6.1:+71738575 MS.gene59977:CDS
TGATGATCATTGATTGGGAT+TGG 0.430835 6.1:-71735674 None:intergenic
GATCTGTGTTTCATGGTAAG+AGG 0.437344 6.1:+71735465 MS.gene59977:CDS
TTTCTTAACGGATGGAGTCT+TGG 0.440466 6.1:+71738537 MS.gene59977:CDS
ACACCAGGAAGAATGAATTC+TGG 0.440652 6.1:-71737130 None:intergenic
GTTGTTGATGATCATTGATT+GGG 0.445628 6.1:-71735679 None:intergenic
AGAGAACTGTCAACTTCCTT+GGG 0.449563 6.1:+71736205 MS.gene59977:CDS
CTGGTGTAACTTCTAATTGT+TGG 0.451842 6.1:+71736837 MS.gene59977:CDS
TTTCTCGAGGAGTTTCTTAA+CGG 0.453906 6.1:+71738525 MS.gene59977:CDS
GAACTAAGATCTGTGTTTCA+TGG 0.456242 6.1:+71735458 MS.gene59977:CDS
AAAACTGTCTGAACGAATAG+AGG 0.462342 6.1:+71739503 MS.gene59977:CDS
TGTTTGCTTGTCAAGGCTCT+AGG 0.468604 6.1:-71739468 None:intergenic
TGGCAAACGAACATGGAATT+GGG 0.471607 6.1:+71735426 MS.gene59977:CDS
GTGGCATACTCATGAAGGTC+AGG 0.490567 6.1:-71740165 None:intergenic
AGTGCTTAATATTATGTCAA+AGG 0.495744 6.1:+71736898 MS.gene59977:CDS
AAGACCCTTGATAGGCAAAT+CGG 0.497171 6.1:-71736448 None:intergenic
GGTAGATCTTGCAGTTTCCT+GGG 0.497662 6.1:+71738704 MS.gene59977:CDS
GAAAGCAAGCTACTTTGAAA+AGG 0.498522 6.1:+71739643 MS.gene59977:CDS
TCGAGGAGTTTCTTAACGGA+TGG 0.500211 6.1:+71738529 MS.gene59977:CDS
AACTGCATGTTTGCTTGTCA+AGG 0.501094 6.1:-71739475 None:intergenic
GGATGAATAAGGTACTTAAA+GGG 0.501407 6.1:+71735588 MS.gene59977:CDS
TTAGAACTGAAAAGTACTCC+TGG 0.505222 6.1:+71736818 MS.gene59977:CDS
GCTAAGATTGTTGTACCTAG+TGG 0.505751 6.1:+71739570 MS.gene59977:CDS
AATTCCATGTTCGTTTGCCA+TGG 0.506447 6.1:-71735423 None:intergenic
GTAGGGTTGGTTAGTTGTGA+TGG 0.506721 6.1:+71736866 MS.gene59977:CDS
ATACATTACCAAATTGAAAG+AGG 0.507339 6.1:-71736268 None:intergenic
CTAATTGTTGGTCACACGTA+GGG 0.509336 6.1:+71736849 MS.gene59977:CDS
GCCTCCATGGCAAACGAACA+TGG 0.509816 6.1:+71735419 None:intergenic
CTCAGAGGAATATGTCTTGG+TGG 0.510484 6.1:+71736619 MS.gene59977:CDS
CACTGAGCAACCCGCGCATG+TGG 0.513108 6.1:+71737026 MS.gene59977:CDS
ACGCACCTTTGGACAAGTAA+TGG 0.524244 6.1:-71736350 None:intergenic
ATCAACAACGAGGAGGTCAT+AGG 0.524747 6.1:+71735693 MS.gene59977:CDS
TACCATGGATTATGTCAAGT+TGG 0.524896 6.1:+71736952 MS.gene59977:CDS
CAAGCTGAGTATCCCTATGT+TGG 0.527658 6.1:-71736774 None:intergenic
TGCCATCACACTTCTTGCAA+CGG 0.530778 6.1:+71738671 MS.gene59977:CDS
ATAGTCAAAATGATCTTTGG+AGG 0.534086 6.1:-71740195 None:intergenic
ATCTGTGTTTCATGGTAAGA+GGG 0.535708 6.1:+71735466 MS.gene59977:CDS
TCCGCTAGAAGACCCTTGAT+AGG 0.537852 6.1:-71736456 None:intergenic
CGAACTTCAAGTTAATAGCA+TGG 0.540344 6.1:-71739542 None:intergenic
GAGCAGCAATAACTAGGATG+TGG 0.542005 6.1:-71737169 None:intergenic
TTCTCATAACCCCACATGCG+CGG 0.556155 6.1:-71737037 None:intergenic
TTGAAGTGTTGCAGTAGTGA+GGG 0.558023 6.1:-71740116 None:intergenic
GTCACTGACAAGGCCAACAT+AGG 0.560597 6.1:+71736761 MS.gene59977:CDS
GAGTGATAAACTTTATGATG+AGG 0.561825 6.1:-71736404 None:intergenic
AGGCTCAGAGGAATATGTCT+TGG 0.563313 6.1:+71736616 MS.gene59977:CDS
ACATGGAATTGGGTTTCTTG+AGG 0.564068 6.1:+71735436 MS.gene59977:CDS
CTAAGATTGTTGTACCTAGT+GGG 0.566085 6.1:+71739571 MS.gene59977:CDS
TCTCATAACCCCACATGCGC+GGG 0.566108 6.1:-71737036 None:intergenic
GCAAAGTCAACAACCTTATG+TGG 0.569183 6.1:-71736713 None:intergenic
CTGAGCAACCCGCGCATGTG+GGG 0.572945 6.1:+71737028 MS.gene59977:CDS
TACACCCTGTATTTGCCACA+TGG 0.574023 6.1:-71737085 None:intergenic
AATTTCATAAAATTTATTGG+AGG 0.580475 6.1:+71736306 MS.gene59977:CDS
AACCGTTGCAAGAAGTGTGA+TGG 0.581734 6.1:-71738673 None:intergenic
CTATCCATCTAGTTCTGGAA+AGG 0.584107 6.1:+71740214 MS.gene59977:CDS
TACTTGTGGCATACTCATGA+AGG 0.588917 6.1:-71740170 None:intergenic
ATTGCCTGAAGAAAATCGAC+AGG 0.589892 6.1:+71738740 MS.gene59977:CDS
AGTTCACTGCGTGTAACACC+AGG 0.590897 6.1:-71737145 None:intergenic
ACTGAGCAACCCGCGCATGT+GGG 0.593698 6.1:+71737027 MS.gene59977:CDS
TCACTGACAAGGCCAACATA+GGG 0.593942 6.1:+71736762 MS.gene59977:CDS
CGTATATGTTGTCACTGACA+AGG 0.598708 6.1:+71736751 MS.gene59977:CDS
TGAATATTTGGAAGTTGTCG+AGG 0.600149 6.1:+71738644 MS.gene59977:CDS
CCAAGCATGATCTTCCCACT+AGG 0.600167 6.1:-71739585 None:intergenic
CAATCGCCTACAAATGACAA+TGG 0.601574 6.1:+71739405 MS.gene59977:CDS
TTCCAACTTGACATAATCCA+TGG 0.602044 6.1:-71736954 None:intergenic
GCCTATCAAGGGTCTTCTAG+CGG 0.602253 6.1:+71736455 MS.gene59977:CDS
CAACACTTCAAGGTCAGTGA+TGG 0.604128 6.1:+71740128 MS.gene59977:CDS
CAACGAGGAGGTCATAGGAC+TGG 0.607727 6.1:+71735698 MS.gene59977:CDS
AACGGATGGAGTCTTGGGGA+TGG 0.609998 6.1:+71738543 MS.gene59977:CDS
GATACGAAAATGCTTCATGT+AGG 0.610679 6.1:-71735639 None:intergenic
GATCTTTGGAGGATTACTTG+TGG 0.611961 6.1:-71740184 None:intergenic
TGTTCCATGTGGCAAATACA+GGG 0.612242 6.1:+71737081 MS.gene59977:CDS
TTGTTGGTCACACGTAGGGT+TGG 0.615794 6.1:+71736853 MS.gene59977:CDS
CTTGAAGTGTTGCAGTAGTG+AGG 0.617065 6.1:-71740117 None:intergenic
ATTTGTAGGCGATTGTAGAG+AGG 0.620941 6.1:-71739397 None:intergenic
ATTCATAGGAACTTCTGAGA+AGG 0.621853 6.1:+71739328 MS.gene59977:intron
ATATTTCATCATGACACGAA+AGG 0.624589 6.1:+71736478 MS.gene59977:CDS
ACTTCCGATTTGCCTATCAA+GGG 0.626406 6.1:+71736444 MS.gene59977:CDS
CAACAATTAGAAGTTACACC+AGG 0.627295 6.1:-71736836 None:intergenic
CAAGATAGACTTCTCTACCA+TGG 0.632047 6.1:+71736937 MS.gene59977:CDS
CCTAGTGGGAAGATCATGCT+TGG 0.634227 6.1:+71739585 MS.gene59977:CDS
GTCATTGCAGAAGAAAAGGA+AGG 0.637291 6.1:+71738579 MS.gene59977:CDS
AAGAACCATTACTTGTCCAA+AGG 0.641369 6.1:+71736345 MS.gene59977:CDS
TCTTAACGGATGGAGTCTTG+GGG 0.642495 6.1:+71738539 MS.gene59977:CDS
TCTAATTGTTGGTCACACGT+AGG 0.652885 6.1:+71736848 MS.gene59977:CDS
ATGATGTCAAGCAAATCCCA+AGG 0.658074 6.1:-71736221 None:intergenic
TCGATAATCATTAATCCATG+TGG 0.658195 6.1:-71735531 None:intergenic
TTTGCCACATGGAACATCGA+GGG 0.658254 6.1:-71737074 None:intergenic
GTTAATAGCATGGAAACACC+AGG 0.672445 6.1:-71739532 None:intergenic
AGAGGCAACTTGAGACGATG+TGG 0.683503 6.1:-71739379 None:intergenic
TGAAGTGTTGCAGTAGTGAG+GGG 0.688199 6.1:-71740115 None:intergenic
GCTTGTTCGAGAATTTCTCG+AGG 0.688854 6.1:+71738512 MS.gene59977:intron
ATTTGCCACATGGAACATCG+AGG 0.704595 6.1:-71737075 None:intergenic
AATGATCATCAACAACGAGG+AGG 0.708383 6.1:+71735686 MS.gene59977:CDS
TATGCCCTCGATGTTCCATG+TGG 0.716778 6.1:+71737070 MS.gene59977:CDS
ATCAATGATCATCAACAACG+AGG 0.770468 6.1:+71735683 MS.gene59977:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATTGGTAAAAAATTAAATA+AGG - chr6.1:71739918-71739937 None:intergenic 10.0%
!!! ATAATTTTTACATACATTAA+GGG + chr6.1:71739955-71739974 MS.gene59977:intron 10.0%
!!! ATTCAAAGTTTTAATTTTTT+TGG + chr6.1:71739058-71739077 MS.gene59977:intron 10.0%
!!! TCTTTTAATCTATTTTTTTA+AGG + chr6.1:71737608-71737627 MS.gene59977:intron 10.0%
!!! TTACAGTTTTATTATTTTAT+TGG + chr6.1:71737500-71737519 MS.gene59977:intron 10.0%
!!! TTCAAAGTTTTAATTTTTTT+GGG + chr6.1:71739059-71739078 MS.gene59977:intron 10.0%
!! AAAAAATAGTAAAAACAAGA+AGG - chr6.1:71736010-71736029 None:intergenic 15.0%
!! AAGAAAAAACAAATAGAATA+AGG - chr6.1:71737295-71737314 None:intergenic 15.0%
!! AATATTGAGAAAAATGTAAA+AGG - chr6.1:71738053-71738072 None:intergenic 15.0%
!! AATTTCATAAAATTTATTGG+AGG + chr6.1:71736306-71736325 MS.gene59977:CDS 15.0%
!! ATATTGAGAAAAATGTAAAA+GGG - chr6.1:71738052-71738071 None:intergenic 15.0%
!! ATTCAAAACTTAAGATATAT+TGG - chr6.1:71739164-71739183 None:intergenic 15.0%
!! ATTTAGTAAAACAAATGAAA+GGG - chr6.1:71739292-71739311 None:intergenic 15.0%
!! GAGAATTTCATAAAATTTAT+TGG + chr6.1:71736303-71736322 MS.gene59977:CDS 15.0%
!! TATCTTATAAATCGATATTA+TGG - chr6.1:71738452-71738471 None:intergenic 15.0%
!! TATTTAGTAAAACAAATGAA+AGG - chr6.1:71739293-71739312 None:intergenic 15.0%
!!! AAAATTTTAACATGTATTGA+AGG + chr6.1:71739864-71739883 MS.gene59977:intron 15.0%
!!! ACTATTTTTTTCGAAAAAAT+GGG + chr6.1:71736020-71736039 MS.gene59977:intron 15.0%
!!! CATAATTTTTACATACATTA+AGG + chr6.1:71739954-71739973 MS.gene59977:intron 15.0%
!!! CTCATTTTCTATAATATTAT+GGG + chr6.1:71736065-71736084 MS.gene59977:intron 15.0%
!!! TAATTTTTACATACATTAAG+GGG + chr6.1:71739956-71739975 MS.gene59977:intron 15.0%
!!! TACTATTTTTTTCGAAAAAA+TGG + chr6.1:71736019-71736038 MS.gene59977:intron 15.0%
!!! TCATTTGTTTTACTAAATAT+TGG + chr6.1:71739294-71739313 MS.gene59977:intron 15.0%
!!! TTTTATCAGGTATTTTTAAA+TGG + chr6.1:71738818-71738837 MS.gene59977:intron 15.0%
!!! TTTTATCTGATATATGTTTT+GGG + chr6.1:71735742-71735761 MS.gene59977:intron 15.0%
!!! TTTTTATCTGATATATGTTT+TGG + chr6.1:71735741-71735760 MS.gene59977:intron 15.0%
!! AAAAAATAAGTCAATCCAAA+CGG - chr6.1:71738090-71738109 None:intergenic 20.0%
!! AAACAATATGCATAAACAAT+AGG - chr6.1:71739035-71739054 None:intergenic 20.0%
!! AAAGGCAATATATTGTTTAA+TGG + chr6.1:71740232-71740251 MS.gene59977:CDS 20.0%
!! ATATTAACAAATGTTACTCT+AGG + chr6.1:71739106-71739125 MS.gene59977:intron 20.0%
!! CCATAATATTATAGAAAATG+AGG - chr6.1:71736067-71736086 None:intergenic 20.0%
!!! AAGATTAAAGCTTTTTTATC+AGG + chr6.1:71738805-71738824 MS.gene59977:intron 20.0%
!!! AGGTATTTTTAAATGGAATT+GGG + chr6.1:71738825-71738844 MS.gene59977:intron 20.0%
!!! CCTCATTTTCTATAATATTA+TGG + chr6.1:71736064-71736083 MS.gene59977:intron 20.0%
!!! TATCAAGGTTTTAAATACAT+CGG + chr6.1:71735795-71735814 MS.gene59977:intron 20.0%
!!! TGATTTGCAAATAAATTTAC+TGG + chr6.1:71737456-71737475 MS.gene59977:intron 20.0%
!!! TTATTTTATTGGACAAGTTT+TGG + chr6.1:71737511-71737530 MS.gene59977:intron 20.0%
!!! TTCTTTGATTTGTGAATAAA+TGG + chr6.1:71737310-71737329 MS.gene59977:intron 20.0%
!!! TTTTAGACATCTATAATATG+AGG + chr6.1:71737357-71737376 MS.gene59977:intron 20.0%
!!! TTTTCTTCTCAACATTAAAA+TGG - chr6.1:71735863-71735882 None:intergenic 20.0%
! AAAAATAAGTCAATCCAAAC+GGG - chr6.1:71738273-71738254 None:intergenic 25.0%
! AAAATACAGCTGTTCAAAAA+AGG - chr6.1:71739838-71739857 None:intergenic 25.0%
! AAAGAACTACATGAGTATAA+AGG + chr6.1:71739441-71739460 MS.gene59977:CDS 25.0%
! AACATTAAAATGGCAGATAA+TGG - chr6.1:71735853-71735872 None:intergenic 25.0%
! AATTTATTGGAGGAATTTCA+TGG + chr6.1:71736316-71736335 MS.gene59977:CDS 25.0%
! AGCATATTTCTTCTTGTAAA+TGG - chr6.1:71736527-71736546 None:intergenic 25.0%
! AGTGCTTAATATTATGTCAA+AGG + chr6.1:71736898-71736917 MS.gene59977:CDS 25.0%
! ATACATTACCAAATTGAAAG+AGG - chr6.1:71736271-71736290 None:intergenic 25.0%
! ATGCTTATTATTCTACACTT+TGG + chr6.1:71737263-71737282 MS.gene59977:intron 25.0%
! ATTCAAAGAAAGGATGAATA+AGG + chr6.1:71735577-71735596 MS.gene59977:CDS 25.0%
! CAAAAATAAGTCAATCCAAA+CGG + chr6.1:71738253-71738272 MS.gene59977:intron 25.0%
! CAGTTCAAAAATTCAAAGAA+AGG + chr6.1:71735567-71735586 MS.gene59977:CDS 25.0%
! CTATTATTGTGAAGTTAACT+TGG + chr6.1:71739979-71739998 MS.gene59977:intron 25.0%
! TATATTATTCCTTTGTAGCT+AGG + chr6.1:71735772-71735791 MS.gene59977:intron 25.0%
! TATGTTTCAATCAACTTCTA+TGG + chr6.1:71737989-71738008 MS.gene59977:intron 25.0%
! TGCAAATAAATTTACTGGAT+TGG + chr6.1:71737461-71737480 MS.gene59977:intron 25.0%
! TGCTTATTATTCTACACTTT+GGG + chr6.1:71737264-71737283 MS.gene59977:intron 25.0%
!! ATATCTTGAGTTGTTGAAAT+GGG - chr6.1:71737972-71737991 None:intergenic 25.0%
!! ATCAACTAAATTTTCCTGTA+CGG + chr6.1:71738922-71738941 MS.gene59977:intron 25.0%
!! ATGAAGTTCTAGCATAATTA+AGG - chr6.1:71735934-71735953 None:intergenic 25.0%
!! TGATTCTAAGAGATTAAAAG+AGG - chr6.1:71737635-71737654 None:intergenic 25.0%
!! TTTTAGACATCTACAATATG+AGG + chr6.1:71737216-71737235 MS.gene59977:CDS 25.0%
!! TTTTATATATAAGGTCCGTT+TGG - chr6.1:71738271-71738290 None:intergenic 25.0%
!!! CAGGTATTTTTAAATGGAAT+TGG + chr6.1:71738824-71738843 MS.gene59977:intron 25.0%
!!! GATGATTTATTTTTCACTGT+TGG + chr6.1:71739778-71739797 MS.gene59977:intron 25.0%
!!! GGGCATAATCATTTAATTTT+TGG + chr6.1:71735608-71735627 MS.gene59977:CDS 25.0%
!!! TTGGTAATGTATGCAAAAAT+TGG + chr6.1:71736279-71736298 MS.gene59977:CDS 25.0%
AAGGTAATCACTTGAATTCT+TGG + chr6.1:71739662-71739681 MS.gene59977:intron 30.0%
ATAGTCAAAATGATCTTTGG+AGG - chr6.1:71740198-71740217 None:intergenic 30.0%
ATATTTCATCATGACACGAA+AGG + chr6.1:71736478-71736497 MS.gene59977:CDS 30.0%
ATCAATCTCGAAATCTTTGT+TGG + chr6.1:71736675-71736694 MS.gene59977:CDS 30.0%
CAAAGGACAAAAAAAGAAGA+AGG + chr6.1:71736178-71736197 MS.gene59977:intron 30.0%
CTTTCTTCTCAAAACATAAC+AGG - chr6.1:71739628-71739647 None:intergenic 30.0%
GAGTGATAAACTTTATGATG+AGG - chr6.1:71736407-71736426 None:intergenic 30.0%
GTCTTTCAAATCTACTTTCA+CGG - chr6.1:71738605-71738624 None:intergenic 30.0%
TAAAAACAAGAAGGTAGAAG+AGG - chr6.1:71736001-71736020 None:intergenic 30.0%
TAACATGTATTGAAGGCTAA+AGG + chr6.1:71739871-71739890 MS.gene59977:intron 30.0%
TACTAATTATCATGAATGCG+TGG + chr6.1:71738292-71738311 MS.gene59977:intron 30.0%
TATTATTCTACACTTTGGGT+TGG + chr6.1:71737268-71737287 MS.gene59977:intron 30.0%
TCACAACAAAGGATAATGTT+AGG - chr6.1:71736156-71736175 None:intergenic 30.0%
TCGATAATCATTAATCCATG+TGG - chr6.1:71735534-71735553 None:intergenic 30.0%
TCTTGGAATCGATGAATATT+TGG + chr6.1:71738632-71738651 MS.gene59977:CDS 30.0%
TCTTTGTTGGATTGCTTATT+CGG + chr6.1:71736688-71736707 MS.gene59977:CDS 30.0%
TGGATAGTCAAAATGATCTT+TGG - chr6.1:71740201-71740220 None:intergenic 30.0%
TTAACAGACACATTCTACTA+GGG - chr6.1:71739690-71739709 None:intergenic 30.0%
TTGTATTGTAAGTAAGGCAA+GGG + chr6.1:71737850-71737869 MS.gene59977:intron 30.0%
TTTAACAGACACATTCTACT+AGG - chr6.1:71739691-71739710 None:intergenic 30.0%
TTTGAAAGACACTTTGTTCT+TGG + chr6.1:71738615-71738634 MS.gene59977:CDS 30.0%
! AATACAACAAGCATTTTACG+AGG - chr6.1:71737837-71737856 None:intergenic 30.0%
! AGGATGAATAAGGTACTTAA+AGG + chr6.1:71735587-71735606 MS.gene59977:CDS 30.0%
! ATTTGCTTGACATCATTTTG+AGG + chr6.1:71736228-71736247 MS.gene59977:CDS 30.0%
! CATATCTTGAGTTGTTGAAA+TGG - chr6.1:71737973-71737992 None:intergenic 30.0%
! GCATGCTTTTATCAAGTTAT+TGG - chr6.1:71739935-71739954 None:intergenic 30.0%
! GGATGAATAAGGTACTTAAA+GGG + chr6.1:71735588-71735607 MS.gene59977:CDS 30.0%
! TATCCTTTGTTGTGATACAA+AGG + chr6.1:71736161-71736180 MS.gene59977:intron 30.0%
! TGATTTGTGAATAAATGGAC+TGG + chr6.1:71737315-71737334 MS.gene59977:intron 30.0%
! TGCTAAAGGATTAACTTGAT+GGG - chr6.1:71740086-71740105 None:intergenic 30.0%
! TTTGATGACCTCTTTCAATT+TGG + chr6.1:71736260-71736279 MS.gene59977:CDS 30.0%
!! AAGCATTTTACGAGGTATTT+TGG - chr6.1:71737829-71737848 None:intergenic 30.0%
!! AGCATTTTACGAGGTATTTT+GGG - chr6.1:71737828-71737847 None:intergenic 30.0%
!! GACTAATGGACTTCTAAATT+GGG + chr6.1:71740025-71740044 MS.gene59977:intron 30.0%
!! GATTTATTTTTCACTGTTGG+TGG + chr6.1:71739781-71739800 MS.gene59977:intron 30.0%
!! GTTAACTTGGATAGTGTTTT+CGG + chr6.1:71739992-71740011 MS.gene59977:intron 30.0%
!! GTTGTTGATGATCATTGATT+GGG - chr6.1:71735682-71735701 None:intergenic 30.0%
!! TAAACAAAGCGAATTTTGAC+AGG - chr6.1:71739758-71739777 None:intergenic 30.0%
!! TATGTCAAGTTGGAATCTTT+GGG + chr6.1:71736962-71736981 MS.gene59977:CDS 30.0%
!! TGCTTGTTGTATTGTAAGTA+AGG + chr6.1:71737844-71737863 MS.gene59977:intron 30.0%
!! TTAACTTGGATAGTGTTTTC+GGG + chr6.1:71739993-71740012 MS.gene59977:intron 30.0%
!! TTATGTCAAGTTGGAATCTT+TGG + chr6.1:71736961-71736980 MS.gene59977:CDS 30.0%
!!! AGTGCGTAATACTTTTTTGT+CGG - chr6.1:71737010-71737029 None:intergenic 30.0%
!!! ATCTGATATATGTTTTGGGA+AGG + chr6.1:71735746-71735765 MS.gene59977:intron 30.0%
AAAACTGTCTGAACGAATAG+AGG + chr6.1:71739503-71739522 MS.gene59977:CDS 35.0%
AAGAACCATTACTTGTCCAA+AGG + chr6.1:71736345-71736364 MS.gene59977:CDS 35.0%
AGAAGTTCCTATGAATACAG+TGG - chr6.1:71739324-71739343 None:intergenic 35.0%
ATACATCGGTCGTTACAAAA+CGG + chr6.1:71735809-71735828 MS.gene59977:intron 35.0%
ATCAATGATCATCAACAACG+AGG + chr6.1:71735683-71735702 MS.gene59977:CDS 35.0%
ATCGCGCAATTGTTTCAAAA+TGG - chr6.1:71737931-71737950 None:intergenic 35.0%
ATCTGTGTTTCATGGTAAGA+GGG + chr6.1:71735466-71735485 MS.gene59977:CDS 35.0%
ATTCAAGCTTTCAACCAACT+TGG + chr6.1:71738017-71738036 MS.gene59977:intron 35.0%
ATTTCTTAACAACGCACCTT+TGG - chr6.1:71736364-71736383 None:intergenic 35.0%
CAAAACAACGTTACGTAGAT+TGG + chr6.1:71737191-71737210 MS.gene59977:CDS 35.0%
CAAATTGAGCATTTCGTATC+AGG - chr6.1:71738873-71738892 None:intergenic 35.0%
CAACAATTAGAAGTTACACC+AGG - chr6.1:71736839-71736858 None:intergenic 35.0%
CTAAGATTGTTGTACCTAGT+GGG + chr6.1:71739571-71739590 MS.gene59977:CDS 35.0%
CTGGTGTAACTTCTAATTGT+TGG + chr6.1:71736837-71736856 MS.gene59977:CDS 35.0%
CTGTTACATATTGCCGTTAT+AGG + chr6.1:71735897-71735916 MS.gene59977:intron 35.0%
CTTTGTTGGATTGCTTATTC+GGG + chr6.1:71736689-71736708 MS.gene59977:CDS 35.0%
GAACTAAGATCTGTGTTTCA+TGG + chr6.1:71735458-71735477 MS.gene59977:CDS 35.0%
GATACGAAAATGCTTCATGT+AGG - chr6.1:71735642-71735661 None:intergenic 35.0%
GGTTATCATTATGCACAGAT+TGG + chr6.1:71738975-71738994 MS.gene59977:intron 35.0%
GTTGTATTGTAAGTAAGGCA+AGG + chr6.1:71737849-71737868 MS.gene59977:intron 35.0%
TACAGCTGTTCAAAAAAGGA+AGG - chr6.1:71739834-71739853 None:intergenic 35.0%
TCAAAAAAGGAAGGCAAACT+CGG - chr6.1:71739825-71739844 None:intergenic 35.0%
TCTTATATAGTGAGAGGACA+CGG - chr6.1:71739731-71739750 None:intergenic 35.0%
TGAATATTTGGAAGTTGTCG+AGG + chr6.1:71738644-71738663 MS.gene59977:CDS 35.0%
TGTATTGTAAGTAAGGCAAG+GGG + chr6.1:71737851-71737870 MS.gene59977:intron 35.0%
TGTCCTTTGTATCACAACAA+AGG - chr6.1:71736167-71736186 None:intergenic 35.0%
TTACATATTGCCGTTATAGG+CGG + chr6.1:71735900-71735919 MS.gene59977:intron 35.0%
TTCATCATTATTGACCCGTT+TGG + chr6.1:71738072-71738091 MS.gene59977:intron 35.0%
TTCCAACTTGACATAATCCA+TGG - chr6.1:71736957-71736976 None:intergenic 35.0%
TTGAGTAGCAACTAGGTATT+AGG + chr6.1:71738954-71738973 MS.gene59977:intron 35.0%
TTGGAATTCTGCTCTTATTG+TGG + chr6.1:71737530-71737549 MS.gene59977:intron 35.0%
TTGGACAAGTAATGGTTCTT+GGG - chr6.1:71736345-71736364 None:intergenic 35.0%
TTTCGTCATATTGCAGAGAA+TGG - chr6.1:71739201-71739220 None:intergenic 35.0%
TTTCTCGAGGAGTTTCTTAA+CGG + chr6.1:71738525-71738544 MS.gene59977:CDS 35.0%
TTTGGACAAGTAATGGTTCT+TGG - chr6.1:71736346-71736365 None:intergenic 35.0%
! AATCGTAGCTTGTGATTTGT+GGG + chr6.1:71740048-71740067 MS.gene59977:intron 35.0%
! ATTCATAGGAACTTCTGAGA+AGG + chr6.1:71739328-71739347 MS.gene59977:intron 35.0%
! CGAACTTCAAGTTAATAGCA+TGG - chr6.1:71739545-71739564 None:intergenic 35.0%
! CTGCTAAAGGATTAACTTGA+TGG - chr6.1:71740087-71740106 None:intergenic 35.0%
! GAAAGCAAGCTACTTTGAAA+AGG + chr6.1:71739643-71739662 MS.gene59977:CDS 35.0%
! GAATTTTTGAACTGCAAGTC+TGG - chr6.1:71735561-71735580 None:intergenic 35.0%
! GACTGGATTGGAATATAGAT+TGG + chr6.1:71737332-71737351 MS.gene59977:intron 35.0%
! TACCATGGATTATGTCAAGT+TGG + chr6.1:71736952-71736971 MS.gene59977:CDS 35.0%
! TCATTGATTGGGATTGGAAT+TGG - chr6.1:71735671-71735690 None:intergenic 35.0%
! TGATGATCATTGATTGGGAT+TGG - chr6.1:71735677-71735696 None:intergenic 35.0%
! TGGATTGGAATATGTTGTAC+TGG + chr6.1:71737476-71737495 MS.gene59977:intron 35.0%
! TTTGACTATCCATCTAGTTC+TGG + chr6.1:71740209-71740228 MS.gene59977:CDS 35.0%
!! CGTTGTTGATGATCATTGAT+TGG - chr6.1:71735683-71735702 None:intergenic 35.0%
!! CTGAGTTGATCAAGAATTTC+TGG - chr6.1:71738332-71738351 None:intergenic 35.0%
!! GGACTAATGGACTTCTAAAT+TGG + chr6.1:71740024-71740043 MS.gene59977:intron 35.0%
!! TGTGAATAAATGGACTGGAT+TGG + chr6.1:71737320-71737339 MS.gene59977:intron 35.0%
!! TGTTTTGAGCAGCAATAACT+AGG - chr6.1:71737178-71737197 None:intergenic 35.0%
!! TTAGAACTGAAAAGTACTCC+TGG + chr6.1:71736818-71736837 MS.gene59977:CDS 35.0%
!! TTATTTTTCACTGTTGGTGG+TGG + chr6.1:71739784-71739803 MS.gene59977:intron 35.0%
!!! TACATGCTTTTAAGACCACA+TGG + chr6.1:71735516-71735535 MS.gene59977:CDS 35.0%
!!! TCTTGCAACGGTTTTAAAAG+AGG + chr6.1:71738683-71738702 MS.gene59977:CDS 35.0%
!!! TGATATATGTTTTGGGAAGG+TGG + chr6.1:71735749-71735768 MS.gene59977:intron 35.0%
AACTGCATGTTTGCTTGTCA+AGG - chr6.1:71739478-71739497 None:intergenic 40.0%
AAGACCCTTGATAGGCAAAT+CGG - chr6.1:71736451-71736470 None:intergenic 40.0%
AAGAGAACTGTCAACTTCCT+TGG + chr6.1:71736204-71736223 MS.gene59977:CDS 40.0%
AATGACGTTGAGTAGCAACT+AGG + chr6.1:71738947-71738966 MS.gene59977:intron 40.0%
AATGATCATCAACAACGAGG+AGG + chr6.1:71735686-71735705 MS.gene59977:CDS 40.0%
ACACCAGGAAGAATGAATTC+TGG - chr6.1:71737133-71737152 None:intergenic 40.0%
ACATGGAATTGGGTTTCTTG+AGG + chr6.1:71735436-71735455 MS.gene59977:CDS 40.0%
ACCTTGATACCTAGCTACAA+AGG - chr6.1:71735784-71735803 None:intergenic 40.0%
AGAGAACTGTCAACTTCCTT+GGG + chr6.1:71736205-71736224 MS.gene59977:CDS 40.0%
ATGATGTCAAGCAAATCCCA+AGG - chr6.1:71736224-71736243 None:intergenic 40.0%
ATGCCAGAATTCATTCTTCC+TGG + chr6.1:71737127-71737146 MS.gene59977:CDS 40.0%
ATGGCAAACGAACATGGAAT+TGG + chr6.1:71735425-71735444 MS.gene59977:CDS 40.0%
ATGGGTCAATTCCTTTGCTA+CGG - chr6.1:71737804-71737823 None:intergenic 40.0%
ATGTTCCATGTGGCAAATAC+AGG + chr6.1:71737080-71737099 MS.gene59977:CDS 40.0%
ATTGCCTGAAGAAAATCGAC+AGG + chr6.1:71738740-71738759 MS.gene59977:CDS 40.0%
ATTGCCTTTCCAGAACTAGA+TGG - chr6.1:71740221-71740240 None:intergenic 40.0%
ATTTGTAGGCGATTGTAGAG+AGG - chr6.1:71739400-71739419 None:intergenic 40.0%
CAAGATAGACTTCTCTACCA+TGG + chr6.1:71736937-71736956 MS.gene59977:CDS 40.0%
CGTATATGTTGTCACTGACA+AGG + chr6.1:71736751-71736770 MS.gene59977:CDS 40.0%
CTAATTGTTGGTCACACGTA+GGG + chr6.1:71736849-71736868 MS.gene59977:CDS 40.0%
CTGCACAAGTTCTACTTACT+GGG + chr6.1:71738381-71738400 MS.gene59977:intron 40.0%
GATCTGTGTTTCATGGTAAG+AGG + chr6.1:71735465-71735484 MS.gene59977:CDS 40.0%
GCAAAGTCAACAACCTTATG+TGG - chr6.1:71736716-71736735 None:intergenic 40.0%
GCTAAGATTGTTGTACCTAG+TGG + chr6.1:71739570-71739589 MS.gene59977:CDS 40.0%
GGAATTGGGAAACAGAGTTA+TGG + chr6.1:71738839-71738858 MS.gene59977:intron 40.0%
GGCAAATACAGGGTGTATAA+AGG + chr6.1:71737091-71737110 MS.gene59977:CDS 40.0%
GTCATTGCAGAAGAAAAGGA+AGG + chr6.1:71738579-71738598 MS.gene59977:CDS 40.0%
GTTAATAGCATGGAAACACC+AGG - chr6.1:71739535-71739554 None:intergenic 40.0%
GTTGGTTGAAAGCTTGAATG+AGG - chr6.1:71738016-71738035 None:intergenic 40.0%
TACTTGTGGCATACTCATGA+AGG - chr6.1:71740173-71740192 None:intergenic 40.0%
TCCTTTGTAGCTAGGTATCA+AGG + chr6.1:71735780-71735799 MS.gene59977:intron 40.0%
TCTAATTGTTGGTCACACGT+AGG + chr6.1:71736848-71736867 MS.gene59977:CDS 40.0%
TGCTGTCATTGCAGAAGAAA+AGG + chr6.1:71738575-71738594 MS.gene59977:CDS 40.0%
TGGCAAACGAACATGGAATT+GGG + chr6.1:71735426-71735445 MS.gene59977:CDS 40.0%
TGGTATGCCACTGTATTCAT+AGG + chr6.1:71739314-71739333 MS.gene59977:intron 40.0%
TGTTCCATGTGGCAAATACA+GGG + chr6.1:71737081-71737100 MS.gene59977:CDS 40.0%
! ACTTCCGATTTGCCTATCAA+GGG + chr6.1:71736444-71736463 MS.gene59977:CDS 40.0%
! GAATCGTAGCTTGTGATTTG+TGG + chr6.1:71740047-71740066 MS.gene59977:intron 40.0%
! GATCTTTGGAGGATTACTTG+TGG - chr6.1:71740187-71740206 None:intergenic 40.0%
! TACTTCCGATTTGCCTATCA+AGG + chr6.1:71736443-71736462 MS.gene59977:CDS 40.0%
! TTCTTAACGGATGGAGTCTT+GGG + chr6.1:71738538-71738557 MS.gene59977:CDS 40.0%
! TTTCTTAACGGATGGAGTCT+TGG + chr6.1:71738537-71738556 MS.gene59977:CDS 40.0%
!! CTATCCATCTAGTTCTGGAA+AGG + chr6.1:71740214-71740233 MS.gene59977:CDS 40.0%
!! TTACGAGGTATTTTGGGCAT+GGG - chr6.1:71737822-71737841 None:intergenic 40.0%
!! TTGAAGTGTTGCAGTAGTGA+GGG - chr6.1:71740119-71740138 None:intergenic 40.0%
!! TTTACGAGGTATTTTGGGCA+TGG - chr6.1:71737823-71737842 None:intergenic 40.0%
!!! CTTACCTGTCGATTTTCTTC+AGG - chr6.1:71738747-71738766 None:intergenic 40.0%
!!! GTCTTGCTTGCTTTTTCCAA+AGG + chr6.1:71736596-71736615 MS.gene59977:CDS 40.0%
!!! TGTCGATTTTCTTCAGGCAA+TGG - chr6.1:71738741-71738760 None:intergenic 40.0%
AAAACGGTATAGGCAGCCAA+CGG + chr6.1:71735825-71735844 MS.gene59977:intron 45.0%
ACGCACCTTTGGACAAGTAA+TGG - chr6.1:71736353-71736372 None:intergenic 45.0%
AGGCTCAGAGGAATATGTCT+TGG + chr6.1:71736616-71736635 MS.gene59977:CDS 45.0%
AGGTAGATCTTGCAGTTTCC+TGG + chr6.1:71738703-71738722 MS.gene59977:CDS 45.0%
ATCAACAACGAGGAGGTCAT+AGG + chr6.1:71735693-71735712 MS.gene59977:CDS 45.0%
ATCACAAAGTGCATGTCAGC+TGG - chr6.1:71738896-71738915 None:intergenic 45.0%
ATTTGCCACATGGAACATCG+AGG - chr6.1:71737078-71737097 None:intergenic 45.0%
CAACACTTCAAGGTCAGTGA+TGG + chr6.1:71740128-71740147 MS.gene59977:CDS 45.0%
CAAGCTGAGTATCCCTATGT+TGG - chr6.1:71736777-71736796 None:intergenic 45.0%
CCAGTAAGTAGAACTTGTGC+AGG - chr6.1:71738383-71738402 None:intergenic 45.0%
CCTGCACAAGTTCTACTTAC+TGG + chr6.1:71738380-71738399 MS.gene59977:intron 45.0%
CGGTCGTTACAAAACGGTAT+AGG + chr6.1:71735815-71735834 MS.gene59977:intron 45.0%
CTCAACGTCATTAACCGTAC+AGG - chr6.1:71738939-71738958 None:intergenic 45.0%
CTCACTACTGCAACACTTCA+AGG + chr6.1:71740118-71740137 MS.gene59977:CDS 45.0%
CTCAGAGGAATATGTCTTGG+TGG + chr6.1:71736619-71736638 MS.gene59977:CDS 45.0%
GACATATTCCTCTGAGCCTT+TGG - chr6.1:71736615-71736634 None:intergenic 45.0%
GAGCAGCAATAACTAGGATG+TGG - chr6.1:71737172-71737191 None:intergenic 45.0%
GCTTGTTCGAGAATTTCTCG+AGG + chr6.1:71738512-71738531 MS.gene59977:intron 45.0%
GGCAGCTCTTATATAGTGAG+AGG - chr6.1:71739737-71739756 None:intergenic 45.0%
GGTAGATCTTGCAGTTTCCT+GGG + chr6.1:71738704-71738723 MS.gene59977:CDS 45.0%
TACACCCTGTATTTGCCACA+TGG - chr6.1:71737088-71737107 None:intergenic 45.0%
TCACTGACAAGGCCAACATA+GGG + chr6.1:71736762-71736781 MS.gene59977:CDS 45.0%
TCGAGGAGTTTCTTAACGGA+TGG + chr6.1:71738529-71738548 MS.gene59977:CDS 45.0%
TGCCATCACACTTCTTGCAA+CGG + chr6.1:71738671-71738690 MS.gene59977:CDS 45.0%
TGCTTATTCGGGACCACATA+AGG + chr6.1:71736700-71736719 MS.gene59977:CDS 45.0%
TGGGTCAATTCCTTTGCTAC+GGG - chr6.1:71737803-71737822 None:intergenic 45.0%
TGTAAGTAAGGCAAGGGGAA+AGG + chr6.1:71737856-71737875 MS.gene59977:intron 45.0%
TGTTTGCTTGTCAAGGCTCT+AGG - chr6.1:71739471-71739490 None:intergenic 45.0%
TTGAGAGTAACCCGTAGCAA+AGG + chr6.1:71737790-71737809 MS.gene59977:intron 45.0%
TTTGCCACATGGAACATCGA+GGG - chr6.1:71737077-71737096 None:intergenic 45.0%
! AACCGTTGCAAGAAGTGTGA+TGG - chr6.1:71738676-71738695 None:intergenic 45.0%
! AACGAATAGAGGCATGTTCC+TGG + chr6.1:71739514-71739533 MS.gene59977:CDS 45.0%
! ATGGCAGATAATGGTACCGT+TGG - chr6.1:71735844-71735863 None:intergenic 45.0%
! CTACGGGTTACTCTCAAAAG+AGG - chr6.1:71737787-71737806 None:intergenic 45.0%
! TCTTAACGGATGGAGTCTTG+GGG + chr6.1:71738539-71738558 MS.gene59977:CDS 45.0%
!! CAATGGAGCATTTTCAACCC+AGG - chr6.1:71738724-71738743 None:intergenic 45.0%
!! CTTGAAGTGTTGCAGTAGTG+AGG - chr6.1:71740120-71740139 None:intergenic 45.0%
!! GGTGGTGGTTGTTCTTTTCT+GGG + chr6.1:71739799-71739818 MS.gene59977:intron 45.0%
!! GTAGGGTTGGTTAGTTGTGA+TGG + chr6.1:71736866-71736885 MS.gene59977:CDS 45.0%
!! TAGTGTTTTCGGGCAAACGT+AGG + chr6.1:71740003-71740022 MS.gene59977:intron 45.0%
!! TGAAGTGTTGCAGTAGTGAG+GGG - chr6.1:71740118-71740137 None:intergenic 45.0%
!!! TGCTTTTTCCAAAGGCTCAG+AGG + chr6.1:71736604-71736623 MS.gene59977:CDS 45.0%
!!! TGGTGGTGGTTGTTCTTTTC+TGG + chr6.1:71739798-71739817 MS.gene59977:intron 45.0%
!!! AATTAGTAATTTTATATATA+AGG - chr6.1:71738280-71738299 None:intergenic 5.0%
!!! TATGATTTTTTTATTTATTA+TGG - chr6.1:71736092-71736111 None:intergenic 5.0%
AGAGGCAACTTGAGACGATG+TGG - chr6.1:71739382-71739401 None:intergenic 50.0%
AGGGGTTGAACAGCTGCTAA+AGG - chr6.1:71740100-71740119 None:intergenic 50.0%
AGTGAGAGGACACGGACAAT+GGG - chr6.1:71739723-71739742 None:intergenic 50.0%
AGTTCACTGCGTGTAACACC+AGG - chr6.1:71737148-71737167 None:intergenic 50.0%
CCAAGCATGATCTTCCCACT+AGG - chr6.1:71739588-71739607 None:intergenic 50.0%
CCTAGTGGGAAGATCATGCT+TGG + chr6.1:71739585-71739604 MS.gene59977:CDS 50.0%
GCCTATCAAGGGTCTTCTAG+CGG + chr6.1:71736455-71736474 MS.gene59977:CDS 50.0%
GGATGTTTCGCCGCCTATAA+CGG - chr6.1:71735913-71735932 None:intergenic 50.0%
GTCACTGACAAGGCCAACAT+AGG + chr6.1:71736761-71736780 MS.gene59977:CDS 50.0%
GTGGCATACTCATGAAGGTC+AGG - chr6.1:71740168-71740187 None:intergenic 50.0%
TAGTGAGAGGACACGGACAA+TGG - chr6.1:71739724-71739743 None:intergenic 50.0%
TATGCCCTCGATGTTCCATG+TGG + chr6.1:71737070-71737089 MS.gene59977:CDS 50.0%
TCCGCTAGAAGACCCTTGAT+AGG - chr6.1:71736459-71736478 None:intergenic 50.0%
TCGGGCAAACGTAGGACTAA+TGG + chr6.1:71740011-71740030 MS.gene59977:intron 50.0%
TTCTCATAACCCCACATGCG+CGG - chr6.1:71737040-71737059 None:intergenic 50.0%
TTGTTGGTCACACGTAGGGT+TGG + chr6.1:71736853-71736872 MS.gene59977:CDS 50.0%
! AAGGGACTTGCTTGCCAAGT+TGG - chr6.1:71738034-71738053 None:intergenic 50.0%
!! GGACACGGACAATGGGTTAT+AGG - chr6.1:71739716-71739735 None:intergenic 50.0%
AACGGATGGAGTCTTGGGGA+TGG + chr6.1:71738543-71738562 MS.gene59977:CDS 55.0%
CAACGAGGAGGTCATAGGAC+TGG + chr6.1:71735698-71735717 MS.gene59977:CDS 55.0%
TCTCATAACCCCACATGCGC+GGG - chr6.1:71737039-71737058 None:intergenic 55.0%
!! ATGAATGCGTGGCTTGCTGC+AGG + chr6.1:71738303-71738322 MS.gene59977:intron 55.0%
ACTGAGCAACCCGCGCATGT+GGG + chr6.1:71737027-71737046 MS.gene59977:CDS 60.0%
CACTGAGCAACCCGCGCATG+TGG + chr6.1:71737026-71737045 MS.gene59977:CDS 65.0%
CTGAGCAACCCGCGCATGTG+GGG + chr6.1:71737028-71737047 MS.gene59977:CDS 65.0%


Chromosome Type Strat End Strand Name
chr6.1 gene 71735425 71740251 71735425 ID=MS.gene59977
chr6.1 mRNA 71735425 71740251 71735425 ID=MS.gene59977.t1;Parent=MS.gene59977
chr6.1 exon 71735425 71735719 71735425 ID=MS.gene59977.t1.exon1;Parent=MS.gene59977.t1
chr6.1 CDS 71735425 71735719 71735425 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
chr6.1 exon 71736183 71736366 71736183 ID=MS.gene59977.t1.exon2;Parent=MS.gene59977.t1
chr6.1 CDS 71736183 71736366 71736183 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
chr6.1 exon 71736400 71737237 71736400 ID=MS.gene59977.t1.exon3;Parent=MS.gene59977.t1
chr6.1 CDS 71736400 71737237 71736400 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
chr6.1 exon 71738513 71738761 71738513 ID=MS.gene59977.t1.exon4;Parent=MS.gene59977.t1
chr6.1 CDS 71738513 71738761 71738513 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
chr6.1 exon 71739336 71739664 71739336 ID=MS.gene59977.t1.exon5;Parent=MS.gene59977.t1
chr6.1 CDS 71739336 71739664 71739336 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
chr6.1 exon 71740107 71740251 71740107 ID=MS.gene59977.t1.exon6;Parent=MS.gene59977.t1
chr6.1 CDS 71740107 71740251 71740107 ID=cds.MS.gene59977.t1;Parent=MS.gene59977.t1
Gene Sequence

>MS.gene59977

ATGGCAAACGAACATGGAATTGGGTTTCTTGAGGAACTAAGATCTGTGTTTCATGGTAAGAGGGAAGAGTATGAAGAGTTTATAAAAGACATACATGCTTTTAAGACCACATGGATTAATGATTATCGAATCACCAGACTTGCAGTTCAAAAATTCAAAGAAAGGATGAATAAGGTACTTAAAGGGCATAATCATTTAATTTTTGGATTCAACGCCTACATGAAGCATTTTCGTATCACACTTCCAATTCCAATCCCAATCAATGATCATCAACAACGAGGAGGTCATAGGACTGGTTAGTACTTGTTTTTACTATTTTTTATCTGATATATGTTTTGGGAAGGTGGTATATTATTCCTTTGTAGCTAGGTATCAAGGTTTTAAATACATCGGTCGTTACAAAACGGTATAGGCAGCCAACGGTACCATTATCTGCCATTTTAATGTTGAGAAGAAAAATCACACTAAAATGCTGTTACATATTGCCGTTATAGGCGGCGAAACATCCTTAATTATGCTAGAACTTCATATATGTTTCTTCTTTTCAGCTTCATTACTTAATCTACATTGCTTCCTCTTCTACCTTCTTGTTTTTACTATTTTTTTCGAAAAAATGGGAAAATAAATATTTCTTTATCTCCTCATTTTCTATAATATTATGGGACCATAATAAATAAAAAAATCATATGTTTTAGAAATATAGAAAGAAAAAACATGTTTGTAAATCACCTAACATTATCCTTTGTTGTGATACAAAGGACAAAAAAAGAAGAAGGTAGAAGAGAACTGTCAACTTCCTTGGGATTTGCTTGACATCATTTTGAGGAATCTAGATTTTGATGACCTCTTTCAATTTGGTAATGTATGCAAAAATTGGCGAGAATTTCATAAAATTTATTGGAGGAATTTCATGGCATCCCAAGAACCATTACTTGTCCAAAGGTGCGTTGTTAAGAAATCTTTCATCTTCTTCAGCTTACCTCATCATAAAGTTTATCACTCAAAGATGATCAATAACTACTTCCGATTTGCCTATCAAGGGTCTTCTAGCGGATATTTCATCATGACACGAAAGGATAATTCATTTATACTTATTAATCCATTTACAAGAAGAAATATGCTAATCAATAACTCAGTCTTCAATGTTGATTTCAAACATTTTTCTTGCAAAGTCTTGCTTGCTTTTTCCAAAGGCTCAGAGGAATATGTCTTGGTGGTTTTATGTATTAATTCTGATAATTTGCATGTCTATCAATCTCGAAATCTTTGTTGGATTGCTTATTCGGGACCACATAAGGTTGTTGACTTTGCTGTTTTAAATTATATCGTATATGTTGTCACTGACAAGGCCAACATAGGGATACTCAGCTTGAAATATGCAAATATAAATTTTTTAGAACTGAAAAGTACTCCTGGTGTAACTTCTAATTGTTGGTCACACGTAGGGTTGGTTAGTTGTGATGGATATCTTTTAGTGCTTAATATTATGTCAAAGGTAACGTTTAACGTGTACAAGATAGACTTCTCTACCATGGATTATGTCAAGTTGGAATCTTTGGGTGACATTGCAATATTTTATCTTCCGACAAAAAAGTATTACGCACTGAGCAACCCGCGCATGTGGGGTTATGAGAACAATTCTATCTATGCCCTCGATGTTCCATGTGGCAAATACAGGGTGTATAAAGGAGATAACAATAAAATGCCAGAATTCATTCTTCCTGGTGTTACACGCAGTGAACTTCCACATCCTAGTTATTGCTGCTCAAAACAACGTTACGTAGATTGGTGTTTTAGACATCTACAATATGAGGTAGATTATACTCTCATTGAGTAGCATGCTTATTATTCTACACTTTGGGTTGGACCTTATTCTATTTGTTTTTTCTTTGATTTGTGAATAAATGGACTGGATTGGAATATAGATTGGTGTTTTAGACATCTATAATATGAGGTAGACTATACTCTCGCTGAGTAGCATGCTTATTATTCTACACTTTGGGTTGGACCTTATTCTATTTGTTTTTTCTTTGATTTGCAAATAAATTTACTGGATTGGAATATGTTGTACTGGTTTACAGTTTTATTATTTTATTGGACAAGTTTTGGAATTCTGCTCTTATTGTGGCACATTGAGAAGCATATCATGCAACATGAAAGTTTTAAATATTATAATTCTCATCTCTTTTAATCTATTTTTTTAAGGACCTCTTTTAATCTCTTAGAATCACTAATTTACATATAAAAAAAATCAATAGTTTTCAATAAAAAAATTAAATAAATCATTAGTTTTCAAAATTTAATATCAGCTTTCTCATTGTTGTATATATAAAATTTATAGAAACACTGTATATAAAAGCCTCTTTTGAGAGTAACCCGTAGCAAAGGAATTGACCCATGCCCAAAATACCTCGTAAAATGCTTGTTGTATTGTAAGTAAGGCAAGGGGAAAGGAATCACTATTAATTTCATTTTCACTAGTAAGAAGCTGAATCATTATCTTCCATTTTGAAACAATTGCGCGATGATTATTATGATGATAAACCCATTTCAACAACTCAAGATATGTTTCAATCAACTTCTATGGTCCTCATTCAAGCTTTCAACCAACTTGGCAAGCAAGTCCCTTTTACATTTTTCTCAATATTTCATCATTATTGACCCGTTTGGATTGACTTATTTTTTAGCTTATGTAAATTAATAAGCTTTTATGTTAATTCATAAGTTCTTGCTAACGAAAATTGTTTCTTCATTAACTAACTTGACAATCTTATGAATGAATATTACTAAAAAGCTTGTTTATTTGCATAAGTTGTTTTGCATAAGCTCAAAAATAAGTCAATCCAAACGGACCTTATATATAAAATTACTAATTATCATGAATGCGTGGCTTGCTGCAGGACTCCAGAAATTCTTGATCAACTCAGAGAGTATTTCATTTCACTAAAAGCTATTCCTGCACAAGTTCTACTTACTGGGTATAATTCTTTTTTGCTTAGTTTTACAGTTCACACTGATTGTATACCATAATATCGATTTATAAGATATGATATGATATGATTATGTGTTTTTCTTATTTCTTTCAGAGCTTGTTCGAGAATTTCTCGAGGAGTTTCTTAACGGATGGAGTCTTGGGGATGGACAATATCATGCTGTCATTGCAGAAGAAAAGGAAGGCCGTGAAAGTAGATTTGAAAGACACTTTGTTCTTGGAATCGATGAATATTTGGAAGTTGTCGAGGTCTATGCCATCACACTTCTTGCAACGGTTTTAAAAGAGGTAGATCTTGCAGTTTCCTGGGTTGAAAATGCTCCATTGCCTGAAGAAAATCGACAGGTAAGAGCATTATCTGTAGATTAAAAGTAATTCTTCTACATAGAAGATTAAAGCTTTTTTATCAGGTATTTTTAAATGGAATTGGGAAACAGAGTTATGGTGTGTTTTCCTGATACGAAATGCTCAATTTGCCAGCTGACATGCACTTTGTGATTATCAAATCAACTAAATTTTCCTGTACGGTTAATGACGTTGAGTAGCAACTAGGTATTAGGTTATCATTATGCACAGATTGGAAGAAGCAATGTCAACGATTGTTTCTAGTATTTTCCTATTGTTTATGCATATTGTTTATGATTCAAAGTTTTAATTTTTTTGGGCGTGTATAGTTTAAAACAAGAAGTATATTAACAAATGTTACTCTAGGTAAAGTTACTAACTTTGACACAATAATCTTTTCCAATATATCTTAAGTTTTGAATCTGTAAATATTTGACCATTCTCTGCAATATGACGAAACTACTAGTTTAGAAAATTTAAAAATTCATCTTTTTCTAAATATCATGTTTGTCTTAAGATGTGATTTTCCCTTTCATTTGTTTTACTAAATATTGGTATGCCACTGTATTCATAGGAACTTCTGAGAAGGTTACGCTCTATACGTTCTCTTAGAAGTACCACATCGTCTCAAGTTGCCTCTCTACAATCGCCTACAAATGACAATGGAACTTATTCTTCGAAAGAACTACATGAGTATAAAGGATCACCTAGAGCCTTGACAAGCAAACATGCAGTTGTCTCAAAACTGTCTGAACGAATAGAGGCATGTTCCTGGTGTTTCCATGCTATTAACTTGAAGTTCGCTAATGCTAAGATTGTTGTACCTAGTGGGAAGATCATGCTTGGTTGTTTGATCTTGTTCGCCTGTTATGTTTTGAGAAGAAAGCAAGCTACTTTGAAAAGGTAATCACTTGAATTCTTGGCTCCCTAGTAGAATGTGTCTGTTAAACACCTATAACCCATTGTCCGTGTCCTCTCACTATATAAGAGCTGCCTGTCAAAATTCGCTTTGTTTAGATGATTTATTTTTCACTGTTGGTGGTGGTTGTTCTTTTCTGGGCCGAGTTTGCCTTCCTTTTTTGAACAGCTGTATTTTCTTTATAAAATTTTAACATGTATTGAAGGCTAAAGGACTATCTTATATTTAACTTAACCTTATTTAATTTTTTACCAATAACTTGATAAAAGCATGCATAATTTTTACATACATTAAGGGGCTATTATTGTGAAGTTAACTTGGATAGTGTTTTCGGGCAAACGTAGGACTAATGGACTTCTAAATTGGGAATCGTAGCTTGTGATTTGTGGGAGCTTGCATTTTCCCATCAAGTTAATCCTTTAGCAGCTGTTCAACCCCTCACTACTGCAACACTTCAAGGTCAGTGATGGTGTTGTTGATCAAGCCTGACCTTCATGAGTATGCCACAAGTAATCCTCCAAAGATCATTTTGACTATCCATCTAGTTCTGGAAAGGCAATATATTGTTTAA
Protein sequence

>MS.gene59977.t1

MANEHGIGFLEELRSVFHGKREEYEEFIKDIHAFKTTWINDYRITRLAVQKFKERMNKVLKGHNHLIFGFNAYMKHFRITLPIPIPINDHQQRGGHRTGQKKKKVEENCQLPWDLLDIILRNLDFDDLFQFGNVCKNWREFHKIYWRNFMASQEPLLVQSLPHHKVYHSKMINNYFRFAYQGSSSGYFIMTRKDNSFILINPFTRRNMLINNSVFNVDFKHFSCKVLLAFSKGSEEYVLVVLCINSDNLHVYQSRNLCWIAYSGPHKVVDFAVLNYIVYVVTDKANIGILSLKYANINFLELKSTPGVTSNCWSHVGLVSCDGYLLVLNIMSKVTFNVYKIDFSTMDYVKLESLGDIAIFYLPTKKYYALSNPRMWGYENNSIYALDVPCGKYRVYKGDNNKMPEFILPGVTRSELPHPSYCCSKQRYVDWCFRHLQYELVREFLEEFLNGWSLGDGQYHAVIAEEKEGRESRFERHFVLGIDEYLEVVEVYAITLLATVLKEVDLAVSWVENAPLPEENRQELLRRLRSIRSLRSTTSSQVASLQSPTNDNGTYSSKELHEYKGSPRALTSKHAVVSKLSERIEACSWCFHAINLKFANAKIVVPSGKIMLGCLILFACYVLRRKQATLKSCSTPHYCNTSRSVMVLLIKPDLHEYATSNPPKIILTIHLVLERQYIV