Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024341.t1 | AES79590.1 | 92.9 | 350 | 25 | 0 | 1 | 350 | 1 | 350 | 1.10E-191 | 679.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024341.t1 | G7KT89 | 92.9 | 350 | 25 | 0 | 1 | 350 | 1 | 350 | 7.9e-192 | 679.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024341.t1 | MTR_7g070100 | 92.857 | 350 | 25 | 0 | 1 | 350 | 1 | 350 | 0.0 | 652 |
MS.gene024341.t1 | MTR_3g006120 | 56.851 | 343 | 144 | 4 | 8 | 347 | 8 | 349 | 4.70e-132 | 381 |
MS.gene024341.t1 | MTR_4g133490 | 58.739 | 349 | 138 | 4 | 3 | 348 | 1 | 346 | 6.78e-132 | 380 |
MS.gene024341.t1 | MTR_3g006100 | 56.395 | 344 | 146 | 4 | 8 | 348 | 8 | 350 | 3.39e-131 | 379 |
MS.gene024341.t1 | MTR_3g006180 | 55.786 | 337 | 145 | 4 | 14 | 347 | 1 | 336 | 1.39e-124 | 362 |
MS.gene024341.t1 | MTR_3g006010 | 54.942 | 344 | 151 | 4 | 7 | 347 | 124 | 466 | 3.60e-124 | 365 |
MS.gene024341.t1 | MTR_3g006140 | 53.161 | 348 | 159 | 4 | 5 | 349 | 27 | 373 | 1.96e-123 | 360 |
MS.gene024341.t1 | MTR_3g045700 | 53.125 | 352 | 151 | 8 | 6 | 350 | 6 | 350 | 6.04e-112 | 330 |
MS.gene024341.t1 | MTR_4g133320 | 58.252 | 309 | 123 | 4 | 43 | 348 | 1 | 306 | 3.44e-111 | 326 |
MS.gene024341.t1 | MTR_3g068220 | 51.130 | 354 | 160 | 6 | 5 | 348 | 5 | 355 | 1.57e-110 | 327 |
MS.gene024341.t1 | MTR_6g091830 | 48.876 | 356 | 167 | 7 | 6 | 350 | 104 | 455 | 4.15e-106 | 318 |
MS.gene024341.t1 | MTR_6g092140 | 48.596 | 356 | 168 | 7 | 6 | 350 | 104 | 455 | 5.18e-105 | 316 |
MS.gene024341.t1 | MTR_7g083950 | 51.977 | 354 | 153 | 9 | 5 | 350 | 88 | 432 | 1.15e-104 | 314 |
MS.gene024341.t1 | MTR_1g100280 | 46.893 | 354 | 142 | 11 | 9 | 350 | 18 | 337 | 3.50e-86 | 263 |
MS.gene024341.t1 | MTR_6g088340 | 46.855 | 318 | 150 | 9 | 46 | 350 | 122 | 433 | 1.77e-84 | 262 |
MS.gene024341.t1 | MTR_3g085910 | 43.614 | 321 | 119 | 6 | 5 | 312 | 4 | 275 | 7.61e-81 | 248 |
MS.gene024341.t1 | MTR_6g011110 | 47.670 | 279 | 133 | 4 | 82 | 350 | 2 | 277 | 7.77e-81 | 248 |
MS.gene024341.t1 | MTR_3g086480 | 48.638 | 257 | 123 | 5 | 88 | 341 | 2 | 252 | 4.95e-74 | 229 |
MS.gene024341.t1 | MTR_1g109340 | 50.988 | 253 | 115 | 4 | 102 | 349 | 106 | 354 | 1.21e-71 | 227 |
MS.gene024341.t1 | MTR_1g109520 | 53.797 | 158 | 68 | 3 | 197 | 349 | 19 | 176 | 3.39e-45 | 153 |
MS.gene024341.t1 | MTR_1g089620 | 57.143 | 119 | 49 | 1 | 176 | 294 | 32 | 148 | 6.24e-39 | 140 |
MS.gene024341.t1 | MTR_1g089085 | 51.429 | 140 | 62 | 3 | 5 | 142 | 40 | 175 | 2.51e-35 | 127 |
MS.gene024341.t1 | MTR_0128s0040 | 50.370 | 135 | 66 | 1 | 33 | 167 | 3 | 136 | 1.43e-32 | 119 |
MS.gene024341.t1 | MTR_1g109090 | 52.101 | 119 | 55 | 2 | 6 | 122 | 18 | 136 | 4.17e-32 | 118 |
MS.gene024341.t1 | MTR_6g023220 | 27.954 | 347 | 235 | 8 | 8 | 347 | 17 | 355 | 7.08e-32 | 123 |
MS.gene024341.t1 | MTR_1g106050 | 56.000 | 100 | 43 | 1 | 3 | 101 | 1 | 100 | 7.44e-29 | 108 |
MS.gene024341.t1 | MTR_1g012330 | 52.679 | 112 | 53 | 0 | 90 | 201 | 10 | 121 | 6.03e-28 | 110 |
MS.gene024341.t1 | MTR_1g093300 | 52.475 | 101 | 46 | 2 | 181 | 280 | 7 | 106 | 7.56e-25 | 98.2 |
MS.gene024341.t1 | MTR_6g091850 | 46.535 | 101 | 48 | 3 | 256 | 350 | 1 | 101 | 1.25e-19 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 80 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACCTTCTTTCTTCTTCTAAA+TGG | 0.149247 | 7.4:-33707891 | None:intergenic |
TCCAAACTTCTTCATATTCT+AGG | 0.200364 | 7.4:+33707727 | MS.gene024341:CDS |
GAAGAAGTTTGGAAAATTAA+AGG | 0.234327 | 7.4:-33707717 | None:intergenic |
TTCTAGTGGTTATCTAATTA+TGG | 0.249660 | 7.4:+33707836 | MS.gene024341:CDS |
GAAATGATATCTAGCATTTC+CGG | 0.264535 | 7.4:-33707591 | None:intergenic |
TTATGGGGATATTCCTATTC+CGG | 0.290074 | 7.4:+33707810 | MS.gene024341:CDS |
CTAGTAGATCAAACTTCTAT+TGG | 0.302250 | 7.4:+33708531 | MS.gene024341:CDS |
CAAACTTCTATTGGTTAGAT+TGG | 0.303466 | 7.4:+33708540 | MS.gene024341:CDS |
CGCAGAATGCCATGTGTATT+CGG | 0.315210 | 7.4:+33708454 | MS.gene024341:CDS |
ATCATCGAAATCTAGATTCT+TGG | 0.315769 | 7.4:-33707613 | None:intergenic |
CCCTAGAATATGAAGAAGTT+TGG | 0.318755 | 7.4:-33707728 | None:intergenic |
CCTTCTTTCTTCTTCTAAAT+GGG | 0.320573 | 7.4:-33707890 | None:intergenic |
CGAAAACACATTGTGCCTTC+TGG | 0.321255 | 7.4:+33708494 | MS.gene024341:CDS |
TTCCAGCTTCTCATAATTCA+TGG | 0.322422 | 7.4:-33708321 | None:intergenic |
GCTTGAAGATGGGTAGCTTA+TGG | 0.338776 | 7.4:+33707793 | MS.gene024341:CDS |
GATGATCTCTTTCAATTCTC+TGG | 0.341703 | 7.4:+33707630 | MS.gene024341:CDS |
CTTGAAGATGGGTAGCTTAT+GGG | 0.343222 | 7.4:+33707794 | MS.gene024341:CDS |
TCTTCAAGCGGTAAGCTCTT+TGG | 0.347884 | 7.4:-33707779 | None:intergenic |
ATCAATCTCGCGATTCTGTT+TGG | 0.349486 | 7.4:+33708042 | MS.gene024341:CDS |
CCGTAACTTTCTCGTGCCTT+AGG | 0.353476 | 7.4:+33708216 | MS.gene024341:CDS |
CTCTCATATCCCCACTTGCT+CGG | 0.381323 | 7.4:-33708404 | None:intergenic |
TTTGGAAAATTAAAGGTGCT+TGG | 0.394702 | 7.4:-33707710 | None:intergenic |
TACACATCCAATACTTTCTC+GGG | 0.395877 | 7.4:-33708281 | None:intergenic |
GTACACATCCAATACTTTCT+CGG | 0.396731 | 7.4:-33708282 | None:intergenic |
TATGAGAAGCTGGAAACTTT+GGG | 0.406395 | 7.4:+33708329 | MS.gene024341:CDS |
TTGGAAAATTAAAGGTGCTT+GGG | 0.406624 | 7.4:-33707709 | None:intergenic |
ATGGAATGTTGTGGACTTTG+TGG | 0.412572 | 7.4:+33708091 | MS.gene024341:CDS |
AAGCGGTAAGCTCTTTGGTT+TGG | 0.413393 | 7.4:-33707774 | None:intergenic |
GTTTGGCGTACTCATTCCAT+AGG | 0.426409 | 7.4:+33708059 | MS.gene024341:CDS |
GACAAACTCTTCAGAACCTT+TGG | 0.426895 | 7.4:-33707979 | None:intergenic |
CCAAACTTCTTCATATTCTA+GGG | 0.427155 | 7.4:+33707728 | MS.gene024341:CDS |
CACAGGGGAAAAGATGATAA+TGG | 0.427700 | 7.4:+33707545 | None:intergenic |
TATGGGGATATTCCTATTCC+GGG | 0.435592 | 7.4:+33707811 | MS.gene024341:CDS |
TTATGAGAAGCTGGAAACTT+TGG | 0.436869 | 7.4:+33708328 | MS.gene024341:CDS |
ACCTTTGGCAAAAGCAAGTA+AGG | 0.446128 | 7.4:-33707964 | None:intergenic |
AAGAGCTTACCGCTTGAAGA+TGG | 0.452320 | 7.4:+33707782 | MS.gene024341:CDS |
TCTCATATCCCCACTTGCTC+GGG | 0.466999 | 7.4:-33708403 | None:intergenic |
ATTCCATGGATTTCGCCCTA+TGG | 0.468516 | 7.4:-33708075 | None:intergenic |
TCTCTGGTGTATGCAAGAAC+TGG | 0.470714 | 7.4:+33707646 | MS.gene024341:CDS |
AACCATGAATTATGAGAAGC+TGG | 0.471305 | 7.4:+33708319 | MS.gene024341:CDS |
TAGTGGTTATCTAATTATGG+TGG | 0.475723 | 7.4:+33707839 | MS.gene024341:CDS |
CAATAGAAGTTTGATCTACT+AGG | 0.493687 | 7.4:-33708530 | None:intergenic |
AACTTTCTCGTGCCTTAGGT+TGG | 0.499150 | 7.4:+33708220 | MS.gene024341:CDS |
TCACTGACAAGGCGGACATA+GGG | 0.499246 | 7.4:+33708138 | MS.gene024341:CDS |
ACCACTAGAAGACCCGGAAT+AGG | 0.500724 | 7.4:-33707823 | None:intergenic |
ATCACTGACAAGGCGGACAT+AGG | 0.519317 | 7.4:+33708137 | MS.gene024341:CDS |
ATTCCATAGGGCGAAATCCA+TGG | 0.520075 | 7.4:+33708072 | MS.gene024341:CDS |
CCCATTTAGAAGAAGAAAGA+AGG | 0.522792 | 7.4:+33707890 | MS.gene024341:CDS |
ATCGATACCTCAGTGCTTCG+AGG | 0.526359 | 7.4:+33707915 | MS.gene024341:CDS |
ACAGGACTGTCAACTTCCTC+CGG | 0.530785 | 7.4:+33707572 | MS.gene024341:CDS |
TGTCCGCCTTGTCAGTGATA+AGG | 0.532182 | 7.4:-33708133 | None:intergenic |
TGCCTTAGGTTGGTTAGTTG+TGG | 0.536174 | 7.4:+33708230 | MS.gene024341:CDS |
TCCTATTCCGGGTCTTCTAG+TGG | 0.539771 | 7.4:+33707822 | MS.gene024341:CDS |
AAAGATGATAATGGAAGCAC+AGG | 0.544801 | 7.4:+33707554 | None:intergenic |
TTGTGGTGAGCAGCTTCTAG+TGG | 0.550341 | 7.4:+33708247 | MS.gene024341:CDS |
ACAAAGTCCACAACATTCCA+TGG | 0.554316 | 7.4:-33708089 | None:intergenic |
CTTTGAGCAACCCGAGCAAG+TGG | 0.555695 | 7.4:+33708393 | MS.gene024341:CDS |
AGAGCTTACCGCTTGAAGAT+GGG | 0.564669 | 7.4:+33707783 | MS.gene024341:CDS |
CCTAAGGCACGAGAAAGTTA+CGG | 0.568307 | 7.4:-33708216 | None:intergenic |
CACCACAACTAACCAACCTA+AGG | 0.568686 | 7.4:-33708232 | None:intergenic |
TTGAAGATGGGTAGCTTATG+GGG | 0.568759 | 7.4:+33707795 | MS.gene024341:CDS |
TGCTCGGGTTGCTCAAAGCA+CGG | 0.571874 | 7.4:-33708388 | None:intergenic |
AGTGGTTATCTAATTATGGT+GGG | 0.579988 | 7.4:+33707840 | MS.gene024341:CDS |
TCTACCTCATCATGTAAATG+TGG | 0.596221 | 7.4:-33708569 | None:intergenic |
TTTGGCGTACTCATTCCATA+GGG | 0.597247 | 7.4:+33708060 | MS.gene024341:CDS |
GCGAAATCCATGGAATGTTG+TGG | 0.600355 | 7.4:+33708082 | MS.gene024341:CDS |
TTGAGCAACCCGAGCAAGTG+GGG | 0.607882 | 7.4:+33708395 | MS.gene024341:CDS |
CTGGTGTATGCAAGAACTGG+AGG | 0.618807 | 7.4:+33707649 | MS.gene024341:CDS |
TATCATCCGCCGAATACACA+TGG | 0.621621 | 7.4:-33708463 | None:intergenic |
TAGATAACCACTAGAAGACC+CGG | 0.622971 | 7.4:-33707829 | None:intergenic |
TTTGAGCAACCCGAGCAAGT+GGG | 0.644025 | 7.4:+33708394 | MS.gene024341:CDS |
ATAAGCTACCCATCTTCAAG+CGG | 0.659986 | 7.4:-33707791 | None:intergenic |
AGGCACGAGAAAGTTACGGA+GGG | 0.676946 | 7.4:-33708212 | None:intergenic |
GGAGTTTGAAGACTACCAGA+AGG | 0.677143 | 7.4:-33708509 | None:intergenic |
TATACACCTTATCACTGACA+AGG | 0.694872 | 7.4:+33708127 | MS.gene024341:CDS |
AAGGCACGAGAAAGTTACGG+AGG | 0.701492 | 7.4:-33708213 | None:intergenic |
ATGATATCTAGCATTTCCGG+AGG | 0.701875 | 7.4:-33707588 | None:intergenic |
ACACCTTATCACTGACAAGG+CGG | 0.705237 | 7.4:+33708130 | MS.gene024341:CDS |
AGAATGCCATGTGTATTCGG+CGG | 0.722920 | 7.4:+33708457 | MS.gene024341:CDS |
AAATTTACCTCGAAGCACTG+AGG | 0.744997 | 7.4:-33707922 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AATTTACTGCATAAATTTTC+TGG | + | chr7.4:33707683-33707702 | MS.gene024341:CDS | 20.0% |
! | GAAGAAGTTTGGAAAATTAA+AGG | - | chr7.4:33707720-33707739 | None:intergenic | 25.0% |
! | TTCTAGTGGTTATCTAATTA+TGG | + | chr7.4:33707836-33707855 | MS.gene024341:CDS | 25.0% |
ACCTTCTTTCTTCTTCTAAA+TGG | - | chr7.4:33707894-33707913 | None:intergenic | 30.0% | |
AGTGGTTATCTAATTATGGT+GGG | + | chr7.4:33707840-33707859 | MS.gene024341:CDS | 30.0% | |
ATCATCGAAATCTAGATTCT+TGG | - | chr7.4:33707616-33707635 | None:intergenic | 30.0% | |
CAATAGAAGTTTGATCTACT+AGG | - | chr7.4:33708533-33708552 | None:intergenic | 30.0% | |
CCAAACTTCTTCATATTCTA+GGG | + | chr7.4:33707728-33707747 | MS.gene024341:CDS | 30.0% | |
CCTTCTTTCTTCTTCTAAAT+GGG | - | chr7.4:33707893-33707912 | None:intergenic | 30.0% | |
CTAGTAGATCAAACTTCTAT+TGG | + | chr7.4:33708531-33708550 | MS.gene024341:CDS | 30.0% | |
GAAATGATATCTAGCATTTC+CGG | - | chr7.4:33707594-33707613 | None:intergenic | 30.0% | |
TAGTGGTTATCTAATTATGG+TGG | + | chr7.4:33707839-33707858 | MS.gene024341:CDS | 30.0% | |
TCCAAACTTCTTCATATTCT+AGG | + | chr7.4:33707727-33707746 | MS.gene024341:CDS | 30.0% | |
! | CAAACTTCTATTGGTTAGAT+TGG | + | chr7.4:33708540-33708559 | MS.gene024341:CDS | 30.0% |
! | TTTTCCACATTTACATGATG+AGG | + | chr7.4:33708565-33708584 | MS.gene024341:CDS | 30.0% |
!! | TTGGAAAATTAAAGGTGCTT+GGG | - | chr7.4:33707712-33707731 | None:intergenic | 30.0% |
!! | TTTGGAAAATTAAAGGTGCT+TGG | - | chr7.4:33707713-33707732 | None:intergenic | 30.0% |
AACCATGAATTATGAGAAGC+TGG | + | chr7.4:33708319-33708338 | MS.gene024341:CDS | 35.0% | |
CCCATTTAGAAGAAGAAAGA+AGG | + | chr7.4:33707890-33707909 | MS.gene024341:CDS | 35.0% | |
CCCTAGAATATGAAGAAGTT+TGG | - | chr7.4:33707731-33707750 | None:intergenic | 35.0% | |
GATGATCTCTTTCAATTCTC+TGG | + | chr7.4:33707630-33707649 | MS.gene024341:CDS | 35.0% | |
GTACACATCCAATACTTTCT+CGG | - | chr7.4:33708285-33708304 | None:intergenic | 35.0% | |
TACACATCCAATACTTTCTC+GGG | - | chr7.4:33708284-33708303 | None:intergenic | 35.0% | |
TATACACCTTATCACTGACA+AGG | + | chr7.4:33708127-33708146 | MS.gene024341:CDS | 35.0% | |
TATGAGAAGCTGGAAACTTT+GGG | + | chr7.4:33708329-33708348 | MS.gene024341:CDS | 35.0% | |
TCTACCTCATCATGTAAATG+TGG | - | chr7.4:33708572-33708591 | None:intergenic | 35.0% | |
TTATGAGAAGCTGGAAACTT+TGG | + | chr7.4:33708328-33708347 | MS.gene024341:CDS | 35.0% | |
TTATGGGGATATTCCTATTC+CGG | + | chr7.4:33707810-33707829 | MS.gene024341:CDS | 35.0% | |
TTCCAGCTTCTCATAATTCA+TGG | - | chr7.4:33708324-33708343 | None:intergenic | 35.0% | |
!! | TTTTGTACCCGAGAAAGTAT+TGG | + | chr7.4:33708274-33708293 | MS.gene024341:CDS | 35.0% |
!!! | CGAGGTAAATTTTCTAGTTC+TGG | + | chr7.4:33707933-33707952 | MS.gene024341:CDS | 35.0% |
!!! | TCGCATTTTTTTATTCGTCG+TGG | + | chr7.4:33708357-33708376 | MS.gene024341:CDS | 35.0% |
ACAAAGTCCACAACATTCCA+TGG | - | chr7.4:33708092-33708111 | None:intergenic | 40.0% | |
ACCTTTGGCAAAAGCAAGTA+AGG | - | chr7.4:33707967-33707986 | None:intergenic | 40.0% | |
ATAAGCTACCCATCTTCAAG+CGG | - | chr7.4:33707794-33707813 | None:intergenic | 40.0% | |
ATCAATCTCGCGATTCTGTT+TGG | + | chr7.4:33708042-33708061 | MS.gene024341:CDS | 40.0% | |
ATGATATCTAGCATTTCCGG+AGG | - | chr7.4:33707591-33707610 | None:intergenic | 40.0% | |
ATGGAATGTTGTGGACTTTG+TGG | + | chr7.4:33708091-33708110 | MS.gene024341:CDS | 40.0% | |
CTTGAAGATGGGTAGCTTAT+GGG | + | chr7.4:33707794-33707813 | MS.gene024341:CDS | 40.0% | |
GACAAACTCTTCAGAACCTT+TGG | - | chr7.4:33707982-33708001 | None:intergenic | 40.0% | |
TAGATAACCACTAGAAGACC+CGG | - | chr7.4:33707832-33707851 | None:intergenic | 40.0% | |
TATGGGGATATTCCTATTCC+GGG | + | chr7.4:33707811-33707830 | MS.gene024341:CDS | 40.0% | |
TTGAAGATGGGTAGCTTATG+GGG | + | chr7.4:33707795-33707814 | MS.gene024341:CDS | 40.0% | |
TTTGGCGTACTCATTCCATA+GGG | + | chr7.4:33708060-33708079 | MS.gene024341:CDS | 40.0% | |
!! | AAATTTACCTCGAAGCACTG+AGG | - | chr7.4:33707925-33707944 | None:intergenic | 40.0% |
AACTTTCTCGTGCCTTAGGT+TGG | + | chr7.4:33708220-33708239 | MS.gene024341:CDS | 45.0% | |
AAGAGCTTACCGCTTGAAGA+TGG | + | chr7.4:33707782-33707801 | MS.gene024341:CDS | 45.0% | |
AAGCGGTAAGCTCTTTGGTT+TGG | - | chr7.4:33707777-33707796 | None:intergenic | 45.0% | |
ACACCTTATCACTGACAAGG+CGG | + | chr7.4:33708130-33708149 | MS.gene024341:CDS | 45.0% | |
AGAATGCCATGTGTATTCGG+CGG | + | chr7.4:33708457-33708476 | MS.gene024341:CDS | 45.0% | |
AGAGCTTACCGCTTGAAGAT+GGG | + | chr7.4:33707783-33707802 | MS.gene024341:CDS | 45.0% | |
ATTCCATAGGGCGAAATCCA+TGG | + | chr7.4:33708072-33708091 | MS.gene024341:CDS | 45.0% | |
ATTCCATGGATTTCGCCCTA+TGG | - | chr7.4:33708078-33708097 | None:intergenic | 45.0% | |
CACCACAACTAACCAACCTA+AGG | - | chr7.4:33708235-33708254 | None:intergenic | 45.0% | |
CCTAAGGCACGAGAAAGTTA+CGG | - | chr7.4:33708219-33708238 | None:intergenic | 45.0% | |
CGAAAACACATTGTGCCTTC+TGG | + | chr7.4:33708494-33708513 | MS.gene024341:CDS | 45.0% | |
CGCAGAATGCCATGTGTATT+CGG | + | chr7.4:33708454-33708473 | MS.gene024341:CDS | 45.0% | |
GCGAAATCCATGGAATGTTG+TGG | + | chr7.4:33708082-33708101 | MS.gene024341:CDS | 45.0% | |
GCTTGAAGATGGGTAGCTTA+TGG | + | chr7.4:33707793-33707812 | MS.gene024341:CDS | 45.0% | |
GGAGTTTGAAGACTACCAGA+AGG | - | chr7.4:33708512-33708531 | None:intergenic | 45.0% | |
GTTTGGCGTACTCATTCCAT+AGG | + | chr7.4:33708059-33708078 | MS.gene024341:CDS | 45.0% | |
TATCATCCGCCGAATACACA+TGG | - | chr7.4:33708466-33708485 | None:intergenic | 45.0% | |
TCTCTGGTGTATGCAAGAAC+TGG | + | chr7.4:33707646-33707665 | MS.gene024341:CDS | 45.0% | |
TCTTCAAGCGGTAAGCTCTT+TGG | - | chr7.4:33707782-33707801 | None:intergenic | 45.0% | |
!! | GCCTTACTTGCTTTTGCCAA+AGG | + | chr7.4:33707963-33707982 | MS.gene024341:CDS | 45.0% |
!! | TGCCTTAGGTTGGTTAGTTG+TGG | + | chr7.4:33708230-33708249 | MS.gene024341:CDS | 45.0% |
AAGGCACGAGAAAGTTACGG+AGG | - | chr7.4:33708216-33708235 | None:intergenic | 50.0% | |
ACAGGACTGTCAACTTCCTC+CGG | + | chr7.4:33707572-33707591 | MS.gene024341:CDS | 50.0% | |
ACCACTAGAAGACCCGGAAT+AGG | - | chr7.4:33707826-33707845 | None:intergenic | 50.0% | |
AGGCACGAGAAAGTTACGGA+GGG | - | chr7.4:33708215-33708234 | None:intergenic | 50.0% | |
ATCACTGACAAGGCGGACAT+AGG | + | chr7.4:33708137-33708156 | MS.gene024341:CDS | 50.0% | |
ATCGATACCTCAGTGCTTCG+AGG | + | chr7.4:33707915-33707934 | MS.gene024341:CDS | 50.0% | |
CCGTAACTTTCTCGTGCCTT+AGG | + | chr7.4:33708216-33708235 | MS.gene024341:CDS | 50.0% | |
CTCTCATATCCCCACTTGCT+CGG | - | chr7.4:33708407-33708426 | None:intergenic | 50.0% | |
CTGGTGTATGCAAGAACTGG+AGG | + | chr7.4:33707649-33707668 | MS.gene024341:CDS | 50.0% | |
TCACTGACAAGGCGGACATA+GGG | + | chr7.4:33708138-33708157 | MS.gene024341:CDS | 50.0% | |
TCCTATTCCGGGTCTTCTAG+TGG | + | chr7.4:33707822-33707841 | MS.gene024341:CDS | 50.0% | |
TCTCATATCCCCACTTGCTC+GGG | - | chr7.4:33708406-33708425 | None:intergenic | 50.0% | |
TGTCCGCCTTGTCAGTGATA+AGG | - | chr7.4:33708136-33708155 | None:intergenic | 50.0% | |
TTGTGGTGAGCAGCTTCTAG+TGG | + | chr7.4:33708247-33708266 | MS.gene024341:CDS | 50.0% | |
TTTGAGCAACCCGAGCAAGT+GGG | + | chr7.4:33708394-33708413 | MS.gene024341:CDS | 50.0% | |
CTTTGAGCAACCCGAGCAAG+TGG | + | chr7.4:33708393-33708412 | MS.gene024341:CDS | 55.0% | |
TTGAGCAACCCGAGCAAGTG+GGG | + | chr7.4:33708395-33708414 | MS.gene024341:CDS | 55.0% | |
! | TGCTCGGGTTGCTCAAAGCA+CGG | - | chr7.4:33708391-33708410 | None:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.4 | gene | 33707558 | 33708610 | 33707558 | ID=MS.gene024341 |
chr7.4 | mRNA | 33707558 | 33708610 | 33707558 | ID=MS.gene024341.t1;Parent=MS.gene024341 |
chr7.4 | exon | 33707558 | 33708610 | 33707558 | ID=MS.gene024341.t1.exon1;Parent=MS.gene024341.t1 |
chr7.4 | CDS | 33707558 | 33708610 | 33707558 | ID=cds.MS.gene024341.t1;Parent=MS.gene024341.t1 |
Gene Sequence |
Protein sequence |