Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47120.t1 | AES75024.2 | 90.4 | 363 | 35 | 0 | 1 | 363 | 1 | 363 | 3.40E-196 | 694.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47120.t1 | G7KN92 | 90.4 | 363 | 35 | 0 | 1 | 363 | 1 | 363 | 2.5e-196 | 694.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene47120.t1 | MTR_6g023220 | 90.358 | 363 | 35 | 0 | 1 | 363 | 1 | 363 | 0.0 | 687 |
MS.gene47120.t1 | MTR_4g099040 | 68.528 | 197 | 32 | 1 | 167 | 363 | 8 | 174 | 9.26e-90 | 267 |
MS.gene47120.t1 | MTR_7g070100 | 28.197 | 305 | 208 | 6 | 18 | 316 | 9 | 308 | 1.13e-27 | 111 |
MS.gene47120.t1 | MTR_3g006120 | 27.303 | 304 | 207 | 7 | 18 | 312 | 9 | 307 | 2.18e-27 | 110 |
MS.gene47120.t1 | MTR_4g133490 | 27.483 | 302 | 211 | 6 | 18 | 313 | 7 | 306 | 6.71e-27 | 109 |
MS.gene47120.t1 | MTR_3g045700 | 29.268 | 328 | 198 | 13 | 18 | 324 | 9 | 323 | 8.98e-27 | 109 |
MS.gene47120.t1 | MTR_3g006010 | 27.333 | 300 | 204 | 6 | 22 | 312 | 130 | 424 | 1.59e-26 | 110 |
MS.gene47120.t1 | MTR_3g006100 | 26.316 | 304 | 210 | 7 | 18 | 312 | 9 | 307 | 7.12e-26 | 106 |
MS.gene47120.t1 | MTR_3g006140 | 24.415 | 299 | 214 | 6 | 22 | 312 | 35 | 329 | 4.61e-25 | 105 |
MS.gene47120.t1 | MTR_3g006180 | 26.621 | 293 | 201 | 7 | 27 | 310 | 5 | 292 | 2.15e-24 | 102 |
MS.gene47120.t1 | MTR_4g133320 | 28.507 | 221 | 151 | 5 | 98 | 313 | 48 | 266 | 4.71e-22 | 95.5 |
MS.gene47120.t1 | MTR_3g068220 | 25.000 | 288 | 209 | 4 | 22 | 304 | 13 | 298 | 4.53e-21 | 93.6 |
MS.gene47120.t1 | MTR_6g091830 | 22.917 | 336 | 246 | 5 | 22 | 351 | 111 | 439 | 3.04e-19 | 89.0 |
MS.gene47120.t1 | MTR_1g109340 | 29.439 | 214 | 141 | 5 | 113 | 318 | 108 | 319 | 3.38e-19 | 88.2 |
MS.gene47120.t1 | MTR_6g092140 | 22.619 | 336 | 247 | 5 | 22 | 351 | 111 | 439 | 8.25e-19 | 87.8 |
MS.gene47120.t1 | MTR_1g100280 | 26.211 | 351 | 208 | 13 | 18 | 353 | 18 | 332 | 1.71e-18 | 85.9 |
MS.gene47120.t1 | MTR_7g083950 | 24.412 | 340 | 224 | 12 | 18 | 338 | 92 | 417 | 6.87e-17 | 82.0 |
MS.gene47120.t1 | MTR_6g011110 | 23.333 | 210 | 153 | 3 | 101 | 305 | 12 | 218 | 2.07e-15 | 75.9 |
MS.gene47120.t1 | MTR_6g088340 | 24.904 | 261 | 181 | 6 | 98 | 351 | 165 | 417 | 3.51e-15 | 76.6 |
MS.gene47120.t1 | MTR_1g089620 | 33.333 | 117 | 73 | 3 | 187 | 302 | 37 | 149 | 2.27e-14 | 73.2 |
MS.gene47120.t1 | MTR_3g085910 | 21.724 | 290 | 189 | 7 | 26 | 313 | 15 | 268 | 1.84e-13 | 70.5 |
MS.gene47120.t1 | MTR_3g086480 | 24.057 | 212 | 158 | 3 | 98 | 308 | 3 | 212 | 1.04e-11 | 64.7 |
MS.gene47120.t1 | MTR_1g109520 | 31.034 | 116 | 76 | 3 | 205 | 318 | 21 | 134 | 2.99e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|
Find 78 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACAACTCATTTCCAATTTC+TGG | 0.074639 | 6.3:-16496155 | None:intergenic |
ATAAAGTCATTTCACTTTAG+AGG | 0.233628 | 6.3:+16496497 | MS.gene47120:CDS |
AGAATAGGGAAATGGTATTA+TGG | 0.235741 | 6.3:+16496626 | MS.gene47120:CDS |
ATTCGCACTTATTATTTGAT+AGG | 0.251062 | 6.3:-16496586 | None:intergenic |
GTCACAAGCGAGGCTGATTT+CGG | 0.259220 | 6.3:+16496704 | MS.gene47120:CDS |
CTATGAGAAGACCGGGTAAA+TGG | 0.271962 | 6.3:+16496963 | MS.gene47120:CDS |
TCACAAGCGAGGCTGATTTC+GGG | 0.272599 | 6.3:+16496705 | MS.gene47120:CDS |
AGATCTTCTGAATCATCATT+TGG | 0.287406 | 6.3:-16496785 | None:intergenic |
GGTGATAAAGCATTGTTCTT+AGG | 0.288045 | 6.3:+16496923 | MS.gene47120:CDS |
ACTGAAATATTACCAGAAAT+TGG | 0.315879 | 6.3:+16496143 | MS.gene47120:CDS |
GTGGATTAAGATGGGTGATT+TGG | 0.337176 | 6.3:+16496901 | MS.gene47120:CDS |
TGGATTAAGATGGGTGATTT+GGG | 0.366799 | 6.3:+16496902 | MS.gene47120:CDS |
AAGGTCTATCATTCTAGAAT+AGG | 0.367341 | 6.3:+16496611 | MS.gene47120:CDS |
ACTTCTAACAAATCCTTTGT+TGG | 0.371290 | 6.3:+16496386 | MS.gene47120:CDS |
AAATAATAAGTGCGAATATA+AGG | 0.375173 | 6.3:+16496592 | MS.gene47120:CDS |
AGGTCTATCATTCTAGAATA+GGG | 0.378229 | 6.3:+16496612 | MS.gene47120:CDS |
GCTCAAATCATCAAATGAAA+TGG | 0.379506 | 6.3:+16496304 | MS.gene47120:CDS |
AAATCCTTTGTTGGGTGCAC+TGG | 0.382971 | 6.3:+16496395 | MS.gene47120:CDS |
GAATAGGGAAATGGTATTAT+GGG | 0.386513 | 6.3:+16496627 | MS.gene47120:CDS |
GTGGTAGGTTTCTGTGCATT+TGG | 0.388703 | 6.3:+16496203 | MS.gene47120:CDS |
GATCTTCTGAATCATCATTT+GGG | 0.390668 | 6.3:-16496784 | None:intergenic |
TTCACTTGGTTGGTATTGTC+CGG | 0.397946 | 6.3:+16497108 | MS.gene47120:CDS |
CTTCTAACAAATCCTTTGTT+GGG | 0.407191 | 6.3:+16496387 | MS.gene47120:CDS |
CTTTGAATAAACATGAAATT+CGG | 0.418455 | 6.3:+16496468 | MS.gene47120:CDS |
ATCAAGTTTCTTCACTTGGT+TGG | 0.420046 | 6.3:+16497098 | MS.gene47120:CDS |
ATTCCATTGGTGGGAAAATC+CGG | 0.422927 | 6.3:+16497073 | MS.gene47120:CDS |
AGCATTGTTCTTAGGAGGTA+AGG | 0.423049 | 6.3:+16496931 | MS.gene47120:CDS |
CGAATTTCATGTTTATTCAA+AGG | 0.433654 | 6.3:-16496467 | None:intergenic |
GAATTTCATGTTTATTCAAA+GGG | 0.434582 | 6.3:-16496466 | None:intergenic |
TATGAGAAGACCGGGTAAAT+GGG | 0.434827 | 6.3:+16496964 | MS.gene47120:CDS |
TTCGCACTTATTATTTGATA+GGG | 0.446881 | 6.3:-16496585 | None:intergenic |
TTCACCTTCATGCACTGATC+CGG | 0.447635 | 6.3:-16497127 | None:intergenic |
TCATTTGGGATATGATGAAC+AGG | 0.452027 | 6.3:-16496770 | None:intergenic |
ATCATTCTAGAATAGGGAAA+TGG | 0.455477 | 6.3:+16496618 | MS.gene47120:CDS |
GTCTCGTGGTAAGAATACTA+TGG | 0.459990 | 6.3:+16496349 | MS.gene47120:CDS |
GTTGTGGGAGGAGATTTCTA+AGG | 0.460828 | 6.3:+16496172 | MS.gene47120:CDS |
TGGTTGATGCTAGCTTTGCT+TGG | 0.484111 | 6.3:+16496744 | MS.gene47120:CDS |
GAATAAATGCAGCACCTAGC+AGG | 0.489377 | 6.3:-16497025 | None:intergenic |
CAGAAATTGGAAATGAGTTG+TGG | 0.491224 | 6.3:+16496156 | MS.gene47120:CDS |
GGTGATCAAGTTTCTTCACT+TGG | 0.492211 | 6.3:+16497094 | MS.gene47120:CDS |
TACAATGATGTGGATTAAGA+TGG | 0.507645 | 6.3:+16496892 | MS.gene47120:CDS |
ATTAGCTCTTATATATATGC+AGG | 0.510932 | 6.3:+16496119 | MS.gene47120:CDS |
TAGATATTCAAATGTTTCGC+AGG | 0.511868 | 6.3:-16496854 | None:intergenic |
TCCTTTGTTGGGTGCACTGG+AGG | 0.514671 | 6.3:+16496398 | MS.gene47120:CDS |
GATAAAGCATTGTTCTTAGG+AGG | 0.516486 | 6.3:+16496926 | MS.gene47120:CDS |
GCATTGTTCTTAGGAGGTAA+GGG | 0.525656 | 6.3:+16496932 | MS.gene47120:CDS |
CTCAGATGTCCCCATTTACC+CGG | 0.530870 | 6.3:-16496974 | None:intergenic |
CTTAGAATCTCAATCACCAC+AGG | 0.532809 | 6.3:+16496277 | MS.gene47120:CDS |
AGAAATTGGAAATGAGTTGT+GGG | 0.537823 | 6.3:+16496157 | MS.gene47120:CDS |
CGGGGAGTTAAAGATTAATG+TGG | 0.538181 | 6.3:+16496724 | MS.gene47120:CDS |
ACATTTGAATATCTACGAGA+TGG | 0.549725 | 6.3:+16496862 | MS.gene47120:CDS |
ATCTCGAGACTTTACCTGCT+AGG | 0.551838 | 6.3:+16497011 | MS.gene47120:CDS |
TCATTGTACTATGAGAAGAC+CGG | 0.564008 | 6.3:+16496955 | MS.gene47120:CDS |
TCTAAGGGACTAGATGTGGT+AGG | 0.573284 | 6.3:+16496188 | MS.gene47120:CDS |
AATACACACGATTCCATTGG+TGG | 0.575649 | 6.3:+16497063 | MS.gene47120:CDS |
CACAAGCGAGGCTGATTTCG+GGG | 0.580226 | 6.3:+16496706 | MS.gene47120:CDS |
CATTGTACTATGAGAAGACC+GGG | 0.581384 | 6.3:+16496956 | MS.gene47120:CDS |
TTGTGGGAGGAGATTTCTAA+GGG | 0.586885 | 6.3:+16496173 | MS.gene47120:CDS |
TCACGAGCACGATATGATCA+TGG | 0.588130 | 6.3:-16496529 | None:intergenic |
TAGGTGCTGCATTTATTCGA+TGG | 0.593891 | 6.3:+16497030 | MS.gene47120:CDS |
AAGTGAAGAAACTTGATCAC+CGG | 0.597364 | 6.3:-16497092 | None:intergenic |
TCCTCCAGTGCACCCAACAA+AGG | 0.598258 | 6.3:-16496399 | None:intergenic |
GCTAATACACACGATTCCAT+TGG | 0.602685 | 6.3:+16497060 | MS.gene47120:CDS |
TGGATTTCGATACAATGATG+TGG | 0.610214 | 6.3:+16496882 | MS.gene47120:CDS |
ATACACACGATTCCATTGGT+GGG | 0.617485 | 6.3:+16497064 | MS.gene47120:CDS |
AATAGGGAAATGGTATTATG+GGG | 0.621727 | 6.3:+16496628 | MS.gene47120:CDS |
GATTTCTAAGGGACTAGATG+TGG | 0.622405 | 6.3:+16496184 | MS.gene47120:CDS |
GTGCTGCATTTATTCGATGG+AGG | 0.633646 | 6.3:+16497033 | MS.gene47120:CDS |
ATGAGAAGACCGGGTAAATG+GGG | 0.648166 | 6.3:+16496965 | MS.gene47120:CDS |
ACAATGATGTGGATTAAGAT+GGG | 0.650537 | 6.3:+16496893 | MS.gene47120:CDS |
AGTATATCTTGTCACAAGCG+AGG | 0.654711 | 6.3:+16496694 | MS.gene47120:CDS |
TTGTCCGGATCAGTGCATGA+AGG | 0.656066 | 6.3:+16497123 | MS.gene47120:CDS |
GGTGTATGACGTGAATGTTA+CGG | 0.657914 | 6.3:+16496649 | MS.gene47120:CDS |
AATTGGAAATGAGTTGTGGG+AGG | 0.670255 | 6.3:+16496160 | MS.gene47120:CDS |
GAAGGTGAAATATATAGACA+TGG | 0.687760 | 6.3:+16497141 | MS.gene47120:CDS |
AGCACGATATGATCATGGTG+AGG | 0.705620 | 6.3:-16496524 | None:intergenic |
GATGATTTGAGCAAAACCTG+TGG | 0.726476 | 6.3:-16496293 | None:intergenic |
TATTTGTGTGACATGTCTCG+TGG | 0.739451 | 6.3:+16496335 | MS.gene47120:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATAATAAGTGCGAATATA+AGG | + | chr6.3:16496592-16496611 | MS.gene47120:CDS | 20.0% |
!! | CTTTGAATAAACATGAAATT+CGG | + | chr6.3:16496468-16496487 | MS.gene47120:CDS | 20.0% |
!! | GAATTTCATGTTTATTCAAA+GGG | - | chr6.3:16496469-16496488 | None:intergenic | 20.0% |
!!! | AACAAATGATCAACTTTTTT+TGG | + | chr6.3:16496820-16496839 | MS.gene47120:CDS | 20.0% |
! | ACTGAAATATTACCAGAAAT+TGG | + | chr6.3:16496143-16496162 | MS.gene47120:CDS | 25.0% |
! | ATAAAGTCATTTCACTTTAG+AGG | + | chr6.3:16496497-16496516 | MS.gene47120:CDS | 25.0% |
! | ATTCGCACTTATTATTTGAT+AGG | - | chr6.3:16496589-16496608 | None:intergenic | 25.0% |
! | CGAATTTCATGTTTATTCAA+AGG | - | chr6.3:16496470-16496489 | None:intergenic | 25.0% |
! | TTCGCACTTATTATTTGATA+GGG | - | chr6.3:16496588-16496607 | None:intergenic | 25.0% |
!! | ATTAGCTCTTATATATATGC+AGG | + | chr6.3:16496119-16496138 | MS.gene47120:CDS | 25.0% |
AATAGGGAAATGGTATTATG+GGG | + | chr6.3:16496628-16496647 | MS.gene47120:CDS | 30.0% | |
ACATTTGAATATCTACGAGA+TGG | + | chr6.3:16496862-16496881 | MS.gene47120:CDS | 30.0% | |
ACTTCTAACAAATCCTTTGT+TGG | + | chr6.3:16496386-16496405 | MS.gene47120:CDS | 30.0% | |
AGAAATTGGAAATGAGTTGT+GGG | + | chr6.3:16496157-16496176 | MS.gene47120:CDS | 30.0% | |
AGAATAGGGAAATGGTATTA+TGG | + | chr6.3:16496626-16496645 | MS.gene47120:CDS | 30.0% | |
AGATCTTCTGAATCATCATT+TGG | - | chr6.3:16496788-16496807 | None:intergenic | 30.0% | |
CTTCTAACAAATCCTTTGTT+GGG | + | chr6.3:16496387-16496406 | MS.gene47120:CDS | 30.0% | |
GAAGGTGAAATATATAGACA+TGG | + | chr6.3:16497141-16497160 | MS.gene47120:CDS | 30.0% | |
GAATAGGGAAATGGTATTAT+GGG | + | chr6.3:16496627-16496646 | MS.gene47120:CDS | 30.0% | |
GATCTTCTGAATCATCATTT+GGG | - | chr6.3:16496787-16496806 | None:intergenic | 30.0% | |
GCTCAAATCATCAAATGAAA+TGG | + | chr6.3:16496304-16496323 | MS.gene47120:CDS | 30.0% | |
TAGATATTCAAATGTTTCGC+AGG | - | chr6.3:16496857-16496876 | None:intergenic | 30.0% | |
! | ACAATGATGTGGATTAAGAT+GGG | + | chr6.3:16496893-16496912 | MS.gene47120:CDS | 30.0% |
! | TACAATGATGTGGATTAAGA+TGG | + | chr6.3:16496892-16496911 | MS.gene47120:CDS | 30.0% |
!! | AAGGTCTATCATTCTAGAAT+AGG | + | chr6.3:16496611-16496630 | MS.gene47120:CDS | 30.0% |
!! | AGGTCTATCATTCTAGAATA+GGG | + | chr6.3:16496612-16496631 | MS.gene47120:CDS | 30.0% |
!! | ATCATTCTAGAATAGGGAAA+TGG | + | chr6.3:16496618-16496637 | MS.gene47120:CDS | 30.0% |
!! | TTTTGTTTGCAAAACATGGA+AGG | + | chr6.3:16496226-16496245 | MS.gene47120:CDS | 30.0% |
!!! | TTGGTTTTGTTTGCAAAACA+TGG | + | chr6.3:16496222-16496241 | MS.gene47120:CDS | 30.0% |
AAGTGAAGAAACTTGATCAC+CGG | - | chr6.3:16497095-16497114 | None:intergenic | 35.0% | |
ATCAAGTTTCTTCACTTGGT+TGG | + | chr6.3:16497098-16497117 | MS.gene47120:CDS | 35.0% | |
CACAACTCATTTCCAATTTC+TGG | - | chr6.3:16496158-16496177 | None:intergenic | 35.0% | |
CAGAAATTGGAAATGAGTTG+TGG | + | chr6.3:16496156-16496175 | MS.gene47120:CDS | 35.0% | |
TCATTGTACTATGAGAAGAC+CGG | + | chr6.3:16496955-16496974 | MS.gene47120:CDS | 35.0% | |
TGGATTAAGATGGGTGATTT+GGG | + | chr6.3:16496902-16496921 | MS.gene47120:CDS | 35.0% | |
TGGATTTCGATACAATGATG+TGG | + | chr6.3:16496882-16496901 | MS.gene47120:CDS | 35.0% | |
! | TCATTTGGGATATGATGAAC+AGG | - | chr6.3:16496773-16496792 | None:intergenic | 35.0% |
!! | GATAAAGCATTGTTCTTAGG+AGG | + | chr6.3:16496926-16496945 | MS.gene47120:CDS | 35.0% |
!! | GGTGATAAAGCATTGTTCTT+AGG | + | chr6.3:16496923-16496942 | MS.gene47120:CDS | 35.0% |
AATACACACGATTCCATTGG+TGG | + | chr6.3:16497063-16497082 | MS.gene47120:CDS | 40.0% | |
AATTGGAAATGAGTTGTGGG+AGG | + | chr6.3:16496160-16496179 | MS.gene47120:CDS | 40.0% | |
AGCATTGTTCTTAGGAGGTA+AGG | + | chr6.3:16496931-16496950 | MS.gene47120:CDS | 40.0% | |
AGTATATCTTGTCACAAGCG+AGG | + | chr6.3:16496694-16496713 | MS.gene47120:CDS | 40.0% | |
ATACACACGATTCCATTGGT+GGG | + | chr6.3:16497064-16497083 | MS.gene47120:CDS | 40.0% | |
ATTCCATTGGTGGGAAAATC+CGG | + | chr6.3:16497073-16497092 | MS.gene47120:CDS | 40.0% | |
CATTGTACTATGAGAAGACC+GGG | + | chr6.3:16496956-16496975 | MS.gene47120:CDS | 40.0% | |
CGGGGAGTTAAAGATTAATG+TGG | + | chr6.3:16496724-16496743 | MS.gene47120:CDS | 40.0% | |
CTTAGAATCTCAATCACCAC+AGG | + | chr6.3:16496277-16496296 | MS.gene47120:CDS | 40.0% | |
GATGATTTGAGCAAAACCTG+TGG | - | chr6.3:16496296-16496315 | None:intergenic | 40.0% | |
GCATTGTTCTTAGGAGGTAA+GGG | + | chr6.3:16496932-16496951 | MS.gene47120:CDS | 40.0% | |
GCTAATACACACGATTCCAT+TGG | + | chr6.3:16497060-16497079 | MS.gene47120:CDS | 40.0% | |
GGTGATCAAGTTTCTTCACT+TGG | + | chr6.3:16497094-16497113 | MS.gene47120:CDS | 40.0% | |
GGTGTATGACGTGAATGTTA+CGG | + | chr6.3:16496649-16496668 | MS.gene47120:CDS | 40.0% | |
GTCTCGTGGTAAGAATACTA+TGG | + | chr6.3:16496349-16496368 | MS.gene47120:CDS | 40.0% | |
TATGAGAAGACCGGGTAAAT+GGG | + | chr6.3:16496964-16496983 | MS.gene47120:CDS | 40.0% | |
TATTTGTGTGACATGTCTCG+TGG | + | chr6.3:16496335-16496354 | MS.gene47120:CDS | 40.0% | |
TTGTGGGAGGAGATTTCTAA+GGG | + | chr6.3:16496173-16496192 | MS.gene47120:CDS | 40.0% | |
! | GATTTCTAAGGGACTAGATG+TGG | + | chr6.3:16496184-16496203 | MS.gene47120:CDS | 40.0% |
! | GTGGATTAAGATGGGTGATT+TGG | + | chr6.3:16496901-16496920 | MS.gene47120:CDS | 40.0% |
! | TAGGTGCTGCATTTATTCGA+TGG | + | chr6.3:16497030-16497049 | MS.gene47120:CDS | 40.0% |
! | TTCACTTGGTTGGTATTGTC+CGG | + | chr6.3:16497108-16497127 | MS.gene47120:CDS | 40.0% |
AAATCCTTTGTTGGGTGCAC+TGG | + | chr6.3:16496395-16496414 | MS.gene47120:CDS | 45.0% | |
AGCACGATATGATCATGGTG+AGG | - | chr6.3:16496527-16496546 | None:intergenic | 45.0% | |
ATCTCGAGACTTTACCTGCT+AGG | + | chr6.3:16497011-16497030 | MS.gene47120:CDS | 45.0% | |
ATGAGAAGACCGGGTAAATG+GGG | + | chr6.3:16496965-16496984 | MS.gene47120:CDS | 45.0% | |
CTATGAGAAGACCGGGTAAA+TGG | + | chr6.3:16496963-16496982 | MS.gene47120:CDS | 45.0% | |
GAATAAATGCAGCACCTAGC+AGG | - | chr6.3:16497028-16497047 | None:intergenic | 45.0% | |
GTGCTGCATTTATTCGATGG+AGG | + | chr6.3:16497033-16497052 | MS.gene47120:CDS | 45.0% | |
GTGGTAGGTTTCTGTGCATT+TGG | + | chr6.3:16496203-16496222 | MS.gene47120:CDS | 45.0% | |
GTTGTGGGAGGAGATTTCTA+AGG | + | chr6.3:16496172-16496191 | MS.gene47120:CDS | 45.0% | |
TCACGAGCACGATATGATCA+TGG | - | chr6.3:16496532-16496551 | None:intergenic | 45.0% | |
TCTAAGGGACTAGATGTGGT+AGG | + | chr6.3:16496188-16496207 | MS.gene47120:CDS | 45.0% | |
! | TTCACCTTCATGCACTGATC+CGG | - | chr6.3:16497130-16497149 | None:intergenic | 45.0% |
!! | TGGTTGATGCTAGCTTTGCT+TGG | + | chr6.3:16496744-16496763 | MS.gene47120:CDS | 45.0% |
CTCAGATGTCCCCATTTACC+CGG | - | chr6.3:16496977-16496996 | None:intergenic | 50.0% | |
TTGTCCGGATCAGTGCATGA+AGG | + | chr6.3:16497123-16497142 | MS.gene47120:CDS | 50.0% | |
! | GTCACAAGCGAGGCTGATTT+CGG | + | chr6.3:16496704-16496723 | MS.gene47120:CDS | 50.0% |
! | TCACAAGCGAGGCTGATTTC+GGG | + | chr6.3:16496705-16496724 | MS.gene47120:CDS | 50.0% |
! | TCACCGGATTTTCCCACCAA+TGG | - | chr6.3:16497079-16497098 | None:intergenic | 50.0% |
TCCTCCAGTGCACCCAACAA+AGG | - | chr6.3:16496402-16496421 | None:intergenic | 55.0% | |
TCCTTTGTTGGGTGCACTGG+AGG | + | chr6.3:16496398-16496417 | MS.gene47120:CDS | 55.0% | |
! | CACAAGCGAGGCTGATTTCG+GGG | + | chr6.3:16496706-16496725 | MS.gene47120:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6.3 | gene | 16496107 | 16497198 | 16496107 | ID=MS.gene47120 |
chr6.3 | mRNA | 16496107 | 16497198 | 16496107 | ID=MS.gene47120.t1;Parent=MS.gene47120 |
chr6.3 | exon | 16496107 | 16497198 | 16496107 | ID=MS.gene47120.t1.exon1;Parent=MS.gene47120.t1 |
chr6.3 | CDS | 16496107 | 16497198 | 16496107 | ID=cds.MS.gene47120.t1;Parent=MS.gene47120.t1 |
Gene Sequence |
Protein sequence |